AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94622

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94622.t1 MTR_2g084530 93.217 457 30 1 1 457 1 456 0.0 843
MS.gene94622.t1 MTR_4g056520 68.696 460 139 4 1 457 1 458 0.0 624
MS.gene94622.t1 MTR_1g050545 28.972 428 244 15 38 448 90 474 3.14e-34 134
MS.gene94622.t1 MTR_1g094155 25.747 435 268 13 29 448 86 480 1.24e-32 130
MS.gene94622.t1 MTR_4g057595 26.327 452 281 13 11 449 76 488 1.36e-32 129
MS.gene94622.t1 MTR_4g057585 26.281 449 275 15 16 449 80 487 2.44e-32 129
MS.gene94622.t1 MTR_2g095730 27.529 425 245 15 44 448 107 488 3.00e-32 129
MS.gene94622.t1 MTR_4g057600 25.659 417 259 12 44 448 108 485 6.85e-32 127
MS.gene94622.t1 MTR_4g057570 26.244 442 269 11 27 450 83 485 1.56e-31 126
MS.gene94622.t1 MTR_2g095750 27.685 419 249 12 44 448 113 491 5.27e-31 125
MS.gene94622.t1 MTR_5g097180 27.506 429 251 15 36 448 44 428 9.19e-31 124
MS.gene94622.t1 MTR_4g084710 25.000 424 268 10 36 448 46 430 2.74e-30 122
MS.gene94622.t1 MTR_7g013790 26.437 435 264 15 36 447 52 453 4.22e-25 107
MS.gene94622.t1 MTR_2g012850 25.057 439 262 14 36 445 52 452 4.42e-25 107
MS.gene94622.t1 MTR_2g012860 26.728 434 263 16 36 445 58 460 4.32e-24 105
MS.gene94622.t1 MTR_3g498755 27.423 423 264 16 36 441 32 428 9.26e-24 103
MS.gene94622.t1 MTR_4g089155 25.339 442 259 16 36 445 70 472 1.62e-23 103
MS.gene94622.t1 MTR_4g075150 26.471 442 255 18 36 448 51 451 1.67e-23 103
MS.gene94622.t1 MTR_4g075150 25.747 435 269 15 36 448 51 453 1.88e-23 102
MS.gene94622.t1 MTR_8g099930 27.896 423 261 15 36 441 50 445 9.67e-23 100
MS.gene94622.t1 MTR_2g095710 25.891 421 248 13 43 448 103 474 1.96e-22 100
MS.gene94622.t1 MTR_2g449850 26.355 406 250 14 55 441 70 445 2.58e-22 99.8
MS.gene94622.t1 MTR_3g434850 25.586 469 288 19 6 450 15 446 8.70e-22 97.8
MS.gene94622.t1 MTR_4g122950 24.887 442 277 17 36 450 56 469 2.32e-21 97.1
MS.gene94622.t1 MTR_1g021020 23.502 434 264 15 36 450 95 479 5.11e-21 95.9
MS.gene94622.t1 MTR_1g020090 26.116 448 275 17 17 450 84 489 7.31e-21 95.5
MS.gene94622.t1 MTR_1g021010 25.694 432 258 15 36 450 93 478 1.82e-20 94.4
MS.gene94622.t1 MTR_7g021130 26.969 419 268 14 36 441 47 440 2.53e-20 93.6
MS.gene94622.t1 MTR_3g079600 25.792 442 250 19 36 450 93 483 3.10e-20 93.6
MS.gene94622.t1 MTR_3g079620 32.948 173 103 5 36 199 95 263 3.92e-20 93.2
MS.gene94622.t1 MTR_3g034290 26.329 395 248 13 65 448 118 480 1.81e-19 91.3
MS.gene94622.t1 MTR_2g063000 22.573 443 272 12 36 450 56 455 2.12e-19 90.9
MS.gene94622.t1 MTR_3g079560 31.792 173 105 5 36 199 95 263 2.74e-19 90.5
MS.gene94622.t1 MTR_2g062980 32.934 167 97 6 36 194 57 216 6.02e-19 89.4
MS.gene94622.t1 MTR_0003s0560 25.362 414 226 16 65 448 117 477 3.08e-18 87.4
MS.gene94622.t1 MTR_3g079590 32.370 173 104 5 36 199 95 263 3.72e-18 87.0
MS.gene94622.t1 MTR_3g079570 31.214 173 106 5 36 199 96 264 4.18e-18 87.0
MS.gene94622.t1 MTR_1g040370 29.167 216 141 5 36 245 47 256 4.64e-18 86.3
MS.gene94622.t1 MTR_0003s0560 31.944 144 92 2 65 202 117 260 5.78e-18 85.5
MS.gene94622.t1 MTR_2g062990 35.172 145 83 5 36 172 57 198 6.44e-18 86.3
MS.gene94622.t1 MTR_3g090150 23.341 437 282 18 38 453 54 458 1.34e-17 85.5
MS.gene94622.t1 MTR_4g122960 24.263 441 279 17 36 450 56 467 1.69e-17 85.1
MS.gene94622.t1 MTR_3g079630 31.609 174 104 6 36 199 95 263 3.99e-17 84.0
MS.gene94622.t1 MTR_2g081620 23.953 430 274 18 36 447 58 452 9.05e-17 82.8
MS.gene94622.t1 MTR_7g080180 22.068 503 319 20 1 446 1 487 9.13e-17 82.8
MS.gene94622.t1 MTR_5g072570 34.437 151 89 4 55 196 61 210 3.04e-16 81.3
MS.gene94622.t1 MTR_3g090130 22.494 409 268 12 65 453 72 451 4.67e-16 80.5
MS.gene94622.t1 MTR_1g095540 23.843 432 272 19 31 441 44 439 5.12e-16 80.5
MS.gene94622.t1 MTR_1g095560 31.579 152 93 5 31 173 44 193 6.32e-16 80.1
MS.gene94622.t1 MTR_1g095560 31.579 152 93 5 31 173 44 193 6.38e-16 80.1
MS.gene94622.t1 MTR_8g011350 23.756 442 267 18 55 446 63 484 6.69e-16 80.1
MS.gene94622.t1 MTR_3g034290 26.141 241 160 6 36 268 91 321 1.23e-15 79.0
MS.gene94622.t1 MTR_8g011350 28.502 207 124 7 55 247 63 259 5.28e-15 77.4
MS.gene94622.t1 MTR_7g051430 24.083 436 263 19 59 446 69 484 1.94e-14 75.9
MS.gene94622.t1 MTR_7g080180 25.506 247 151 10 1 220 1 241 4.14e-14 74.7
MS.gene94622.t1 MTR_7g051430 33.824 136 76 4 59 183 69 201 1.51e-13 72.4
MS.gene94622.t1 MTR_3g114620 39.823 113 31 2 115 227 12 87 3.11e-13 65.5
MS.gene94622.t1 MTR_2g018600 23.246 456 263 19 34 447 49 459 5.21e-13 71.2
MS.gene94622.t1 MTR_2g018590 23.490 447 274 18 34 447 48 459 8.89e-13 70.5
MS.gene94622.t1 MTR_3g045770 23.542 480 287 21 6 448 9 445 3.54e-12 68.6
MS.gene94622.t1 MTR_4g021520 22.566 452 279 20 14 441 50 454 1.48e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94622.t1 AT2G27920 61.663 433 163 2 28 457 29 461 0.0 550
MS.gene94622.t1 AT2G27920 59.067 386 155 2 75 457 4 389 4.21e-160 458
MS.gene94622.t1 AT2G27920 57.349 347 145 2 114 457 48 394 5.17e-136 397
MS.gene94622.t1 AT3G45010 26.087 437 283 10 20 448 88 492 1.92e-36 140
MS.gene94622.t1 AT3G10410 27.857 420 245 13 44 448 112 488 9.00e-33 130
MS.gene94622.t1 AT5G22980 25.899 417 257 10 44 448 111 487 4.95e-32 128
MS.gene94622.t1 AT1G15000 26.279 430 250 14 36 448 38 417 3.12e-31 125
MS.gene94622.t1 AT4G15100 26.185 443 275 14 36 453 61 476 6.08e-25 107
MS.gene94622.t1 AT1G11080 26.386 451 260 16 36 450 67 481 6.19e-23 101
MS.gene94622.t1 AT1G11080 26.386 451 260 16 36 450 67 481 6.50e-23 101
MS.gene94622.t1 AT3G52010 26.389 432 258 16 36 447 82 473 8.65e-22 98.2
MS.gene94622.t1 AT3G07990 25.000 448 262 20 36 454 51 453 2.61e-21 96.7
MS.gene94622.t1 AT2G05850 25.882 425 270 16 36 447 81 473 4.45e-21 96.3
MS.gene94622.t1 AT5G23210 25.057 439 282 15 36 448 68 485 6.49e-21 95.5
MS.gene94622.t1 AT2G35770 24.057 424 275 15 36 445 55 445 1.41e-20 94.4
MS.gene94622.t1 AT2G33530 27.397 438 273 15 31 450 44 454 2.33e-20 93.6
MS.gene94622.t1 AT3G52000 25.234 428 264 16 36 447 81 468 4.22e-20 93.2
MS.gene94622.t1 AT1G61130 26.164 451 253 17 36 451 48 453 7.76e-20 92.0
MS.gene94622.t1 AT1G43780 24.541 436 275 16 36 447 54 459 1.05e-19 92.0
MS.gene94622.t1 AT4G30610 25.901 444 252 21 36 445 49 449 1.18e-19 91.7
MS.gene94622.t1 AT4G30810 24.823 423 276 16 46 455 67 460 1.29e-19 91.7
MS.gene94622.t1 AT3G63470 24.590 427 269 16 36 447 98 486 1.65e-19 91.3
MS.gene94622.t1 AT2G24010 38.095 147 77 5 36 173 47 188 3.29e-19 90.1
MS.gene94622.t1 AT3G17180 25.450 444 264 18 36 447 56 464 1.12e-18 88.6
MS.gene94622.t1 AT2G35780 35.862 145 83 4 36 172 47 189 3.16e-18 87.0
MS.gene94622.t1 AT5G42230 33.929 168 96 5 55 208 60 226 4.26e-18 87.0
MS.gene94622.t1 AT5G42230 33.929 168 96 5 55 208 60 226 4.26e-18 87.0
MS.gene94622.t1 AT1G28110 26.147 436 279 16 31 450 42 450 6.65e-18 86.3
MS.gene94622.t1 AT1G28110 26.147 436 279 16 31 450 42 450 6.65e-18 86.3
MS.gene94622.t1 AT5G42240 33.333 189 103 7 36 208 49 230 7.26e-18 86.3
MS.gene94622.t1 AT5G08260 24.208 442 287 16 36 454 56 472 1.08e-17 85.9
MS.gene94622.t1 AT5G23210 31.285 179 106 8 36 202 68 241 1.14e-17 85.5
MS.gene94622.t1 AT3G17180 33.562 146 86 5 36 173 56 198 1.18e-17 85.5
MS.gene94622.t1 AT2G12480 24.344 419 256 14 55 447 63 446 9.02e-17 82.8
MS.gene94622.t1 AT3G52020 26.328 433 257 19 36 447 96 487 1.09e-16 82.8
MS.gene94622.t1 AT2G12480 36.508 126 73 2 55 173 63 188 1.79e-16 81.6
MS.gene94622.t1 AT2G12480 36.508 126 73 2 55 173 63 188 1.92e-16 81.6
MS.gene94622.t1 AT2G12480 36.508 126 73 2 55 173 63 188 1.96e-16 81.6
MS.gene94622.t1 AT2G24000 35.374 147 82 6 36 173 47 189 2.27e-16 81.6
MS.gene94622.t1 AT3G02110 31.176 170 105 4 36 197 54 219 3.71e-16 80.9
MS.gene94622.t1 AT4G12910 26.316 247 159 8 36 270 52 287 7.17e-16 80.1
MS.gene94622.t1 AT4G12910 26.316 247 159 8 36 270 52 287 7.26e-16 80.1
MS.gene94622.t1 AT2G24010 33.951 162 78 6 36 173 18 174 2.31e-15 77.8
MS.gene94622.t1 AT3G25420 31.410 156 92 4 36 181 47 197 3.23e-15 78.2
MS.gene94622.t1 AT2G24010 33.951 162 78 6 36 173 18 174 6.38e-15 77.0
MS.gene94622.t1 AT2G24010 33.951 162 78 6 36 173 47 203 6.70e-15 77.0
MS.gene94622.t1 AT5G22960 29.605 152 85 4 33 182 34 165 9.54e-15 73.2
MS.gene94622.t1 AT2G22980 23.671 414 257 16 34 434 41 408 1.02e-12 70.1
MS.gene94622.t1 AT3G56540 30.935 139 87 4 36 168 96 231 2.16e-12 67.8
MS.gene94622.t1 AT1G73290 26.180 233 136 10 34 248 47 261 3.03e-12 67.8
MS.gene94622.t1 AT1G73290 26.180 233 136 10 34 248 47 261 5.52e-12 67.8
MS.gene94622.t1 AT1G73290 26.180 233 136 10 34 248 47 261 5.87e-12 67.8
MS.gene94622.t1 AT1G73280 26.033 242 139 10 6 220 14 242 8.90e-12 67.0
MS.gene94622.t1 AT1G73300 22.378 429 252 20 34 436 48 421 1.15e-11 67.0
MS.gene94622.t1 AT1G73300 22.378 429 252 20 34 436 48 421 1.15e-11 67.0
MS.gene94622.t1 AT1G73280 22.270 467 268 21 6 436 14 421 1.19e-11 67.0
MS.gene94622.t1 AT5G36180 22.170 424 255 18 34 434 48 419 1.46e-11 66.6
MS.gene94622.t1 AT2G22980 23.656 372 233 13 34 393 41 373 1.91e-11 66.2
MS.gene94622.t1 AT3G12220 30.114 176 103 6 34 195 42 211 2.40e-11 65.9
MS.gene94622.t1 AT2G22980 23.656 372 233 13 34 393 41 373 3.05e-11 65.5
MS.gene94622.t1 AT3G12220 30.114 176 103 6 34 195 42 211 3.11e-11 65.5
MS.gene94622.t1 AT3G12220 30.061 163 96 5 45 195 25 181 6.22e-11 64.3
MS.gene94622.t1 AT2G22970 27.451 204 121 7 34 220 40 233 7.10e-11 63.9
MS.gene94622.t1 AT2G22970 27.451 204 121 7 34 220 40 233 8.72e-11 64.3

Find 91 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTGACACCATTTAATA+AGG 0.235411 2.4:+14898264 None:intergenic
GTTCTTACCACATAGTCTTC+TGG 0.243568 2.4:+14898898 None:intergenic
GAAATTCCTTGGCTCCAAAT+TGG 0.257213 2.4:+14899977 None:intergenic
TTTCTCACCTCAGCAATTCT+TGG 0.278398 2.4:+14898061 None:intergenic
GATCTAGACACCTTATTAAA+TGG 0.279796 2.4:-14898274 MS.gene94622:CDS
CTAAACTTCTATTGGTTACT+TGG 0.283816 2.4:-14897517 MS.gene94622:CDS
GTCAGGCCTTCAAAATTTCT+TGG 0.299231 2.4:-14897611 MS.gene94622:CDS
TGGCCCTCTTGATTCCAATT+TGG 0.304252 2.4:-14899991 MS.gene94622:CDS
TGAATTGAACAGGGTGGTTC+AGG 0.305284 2.4:-14900041 MS.gene94622:intron
ATGAAAACCTAAACTTCTAT+TGG 0.313670 2.4:-14897525 MS.gene94622:CDS
CAAGTAACCAATAGAAGTTT+AGG 0.319105 2.4:+14897518 None:intergenic
GCCAATCATTCTCTGGTTGC+AGG 0.324301 2.4:-14900191 MS.gene94622:CDS
TTTGTCACTCTTGTATTCCT+TGG 0.347875 2.4:-14901023 MS.gene94622:CDS
GGAAAATTTGCTGCTACTCT+TGG 0.354637 2.4:-14899487 MS.gene94622:CDS
CTCAACCAAGTGAAATTCCT+TGG 0.361943 2.4:+14899966 None:intergenic
TGAAGATGGATTAGAAGAAT+GGG 0.371841 2.4:-14900961 MS.gene94622:CDS
TTCTTACCACATAGTCTTCT+GGG 0.375634 2.4:+14898899 None:intergenic
GTGAAGATGGATTAGAAGAA+TGG 0.379824 2.4:-14900962 MS.gene94622:CDS
AAAAGCAGATTTGCTATTTG+TGG 0.380443 2.4:-14899943 MS.gene94622:intron
TCACAGAAGCACACATGTTC+TGG 0.387689 2.4:-14900261 MS.gene94622:intron
GTTGATGAGTTGCTAGCTCT+TGG 0.389681 2.4:-14897919 MS.gene94622:CDS
CTTGACATGTCTTTCAAAAG+AGG 0.392714 2.4:+14898786 None:intergenic
TAGAAATAACAGCAACTTTG+TGG 0.395994 2.4:-14898544 MS.gene94622:intron
GAGAATGATTGGCCATGGTT+TGG 0.403314 2.4:+14900201 None:intergenic
CACCATGTTTAGTGCTATGC+AGG 0.403555 2.4:+14897369 None:intergenic
TTCTATTGGTTACTTGGTGC+TGG 0.410366 2.4:-14897511 MS.gene94622:CDS
CCCTGCAACCAGAGAATGAT+TGG 0.421423 2.4:+14900190 None:intergenic
ATATGATTTAAAGAAGCCTT+TGG 0.421714 2.4:+14897546 None:intergenic
CTTTCACTTCCGCAATATAG+AGG 0.424690 2.4:+14897574 None:intergenic
GAGGGATCCTCCACTCTGTA+GGG 0.430638 2.4:+14900223 None:intergenic
GAGCCAAGATTCAGTTCCCT+TGG 0.431242 2.4:+14897752 None:intergenic
TGTTACTTGTGTAGATGGTC+AGG 0.435142 2.4:-14897628 MS.gene94622:intron
AAACTGAACCCTGTACCAAC+TGG 0.435888 2.4:+14899646 None:intergenic
TTTCAATGAAGTAAGATACT+TGG 0.436573 2.4:+14898318 None:intergenic
GCTATGCAGGGCTGATCAAT+AGG 0.442197 2.4:+14897382 None:intergenic
CAACCAAGGGAACTGAATCT+TGG 0.446046 2.4:-14897755 MS.gene94622:CDS
TCAGGCCTTCAAAATTTCTT+GGG 0.448897 2.4:-14897610 MS.gene94622:CDS
TTGAGAACAGTTTGGCAGAA+AGG 0.457698 2.4:-14898638 MS.gene94622:intron
ATTTGACATTGCAGTTCTCA+TGG 0.458928 2.4:-14898812 MS.gene94622:intron
TAGGACAATCCAGTTGGTAC+AGG 0.460572 2.4:-14899655 MS.gene94622:CDS
GAACAGGGTGGTTCAGGAGT+TGG 0.464636 2.4:-14900035 MS.gene94622:intron
GGAGGGATCCTCCACTCTGT+AGG 0.468420 2.4:+14900222 None:intergenic
GGTGGTTCAGGAGTTGGATT+CGG 0.470677 2.4:-14900029 MS.gene94622:CDS
AACCATGGCCAATCATTCTC+TGG 0.471827 2.4:-14900198 MS.gene94622:CDS
TTGTTAATGCAACTTCTACA+TGG 0.473397 2.4:-14898587 MS.gene94622:CDS
AATGATTGGCCATGGTTTGG+AGG 0.489481 2.4:+14900204 None:intergenic
TTGATTCCAATTTGGAGCCA+AGG 0.502673 2.4:-14899983 MS.gene94622:CDS
GGTGCTTTGAAGAGTGAAGA+TGG 0.519458 2.4:-14900975 MS.gene94622:CDS
GTGTGGTATTAGCAGACAGC+TGG 0.524572 2.4:-14898927 MS.gene94622:CDS
TTTGACATTGCAGTTCTCAT+GGG 0.549489 2.4:-14898811 MS.gene94622:intron
CAATACTATCTTCAAACCGC+TGG 0.553205 2.4:+14897328 None:intergenic
TGATCTCATTTGTGCAACCA+AGG 0.557323 2.4:-14897769 MS.gene94622:CDS
ATGATTGGCCATGGTTTGGA+GGG 0.557889 2.4:+14900205 None:intergenic
TTTCTTCTCAAGTGTTGATG+AGG 0.560353 2.4:+14898372 None:intergenic
AACCAGAGAATGATTGGCCA+TGG 0.561866 2.4:+14900196 None:intergenic
GGAAGATTGAAGACTACACT+TGG 0.562346 2.4:-14899436 MS.gene94622:CDS
CCAATCATTCTCTGGTTGCA+GGG 0.566202 2.4:-14900190 MS.gene94622:CDS
TGGAGCCAAGGAATTTCACT+TGG 0.566368 2.4:-14899971 MS.gene94622:CDS
ATCAAGCAACAACTTGAAGA+TGG 0.567563 2.4:-14898615 MS.gene94622:CDS
ATAATATAGGACAATCCAGT+TGG 0.573531 2.4:-14899661 MS.gene94622:intron
CTTCATAAAATAGGAAACCA+AGG 0.581708 2.4:+14901006 None:intergenic
GATCTCATTTGTGCAACCAA+GGG 0.589058 2.4:-14897768 MS.gene94622:CDS
TGCATAGCACTAAACATGGT+GGG 0.591238 2.4:-14897367 MS.gene94622:CDS
GAAGATGGATTAGAAGAATG+GGG 0.592964 2.4:-14900960 MS.gene94622:CDS
GACAGAACTCCTCTATATTG+CGG 0.597836 2.4:-14897583 MS.gene94622:CDS
TGCAATTACACAGTCACCAG+CGG 0.598764 2.4:-14897344 MS.gene94622:CDS
GGCTCCAAATTGGAATCAAG+AGG 0.603391 2.4:+14899987 None:intergenic
TTGACATTGCAGTTCTCATG+GGG 0.607924 2.4:-14898810 MS.gene94622:intron
TATGAAACCAAGAATTGCTG+AGG 0.611925 2.4:-14898068 MS.gene94622:intron
ACTTGTCAAAACTGATGAGG+AGG 0.613052 2.4:-14899605 MS.gene94622:CDS
ATTACTTGTCAAAACTGATG+AGG 0.618007 2.4:-14899608 MS.gene94622:CDS
AGGGATCCTCCACTCTGTAG+GGG 0.624983 2.4:+14900224 None:intergenic
CAGAAGCACACATGTTCTGG+TGG 0.633017 2.4:-14900258 MS.gene94622:CDS
AGATTGAAGACTACACTTGG+AGG 0.634315 2.4:-14899433 MS.gene94622:intron
AGGACAATCCAGTTGGTACA+GGG 0.637361 2.4:-14899654 MS.gene94622:CDS
GATCTCCCCAGAAGACTATG+TGG 0.641298 2.4:-14898905 MS.gene94622:intron
TGGAGGATCCCTCCAAACCA+TGG 0.645608 2.4:-14900213 MS.gene94622:CDS
CTGCATAGCACTAAACATGG+TGG 0.646012 2.4:-14897368 MS.gene94622:CDS
TAATAGTGTAGTCAAGTCAG+TGG 0.648733 2.4:+14899579 None:intergenic
ACCATGTTTAGTGCTATGCA+GGG 0.650772 2.4:+14897370 None:intergenic
GCCCTGCATAGCACTAAACA+TGG 0.652704 2.4:-14897371 MS.gene94622:CDS
GTCAATGTAACTGTGTACAA+TGG 0.655505 2.4:-14897895 MS.gene94622:CDS
ATGTCAAGAATTGATGACAA+TGG 0.657978 2.4:-14898771 MS.gene94622:CDS
TCTTACCACATAGTCTTCTG+GGG 0.665579 2.4:+14898900 None:intergenic
GCTCCAAATTGGAATCAAGA+GGG 0.672363 2.4:+14899988 None:intergenic
CAGAAGCCCCTACAGAGTGG+AGG 0.673135 2.4:-14900230 MS.gene94622:CDS
TTACAGAAGCCCCTACAGAG+TGG 0.681726 2.4:-14900233 MS.gene94622:CDS
ATCATTCTCTGGTTGCAGGG+AGG 0.688272 2.4:-14900187 MS.gene94622:CDS
GGAAGTGAAAGAAAGACCAA+AGG 0.702647 2.4:-14897562 MS.gene94622:CDS
TATTCAAAGAAATATCAATG+AGG 0.703117 2.4:-14898348 MS.gene94622:CDS
AATTGCTGACAGATGGTATG+CGG 0.759275 2.4:-14898128 MS.gene94622:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAACACAATTTAAAATAAA+TGG + chr2.4:14897860-14897879 None:intergenic 10.0%
!!! TTTGTTGTTAATTATAATAT+AGG - chr2.4:14898709-14898728 MS.gene94622:intron 10.0%
!! AGAAATTAATTATTCATTAG+TGG + chr2.4:14899921-14899940 None:intergenic 15.0%
!! ATAACACAATTCAAAATAAA+TGG + chr2.4:14898103-14898122 None:intergenic 15.0%
!! TAAACATATATTTATCTAGT+TGG - chr2.4:14899060-14899079 MS.gene94622:intron 15.0%
!! TTAATTCAAATAATACTTAC+AGG + chr2.4:14898223-14898242 None:intergenic 15.0%
!! TTACACAATTCTAATATATT+TGG + chr2.4:14897474-14897493 None:intergenic 15.0%
!! TTTATAGATGAAAAATTTCA+AGG + chr2.4:14898987-14899006 None:intergenic 15.0%
!!! AAATGTAATTTGTTCATTTT+TGG - chr2.4:14898860-14898879 MS.gene94622:intron 15.0%
!!! AAATTTTTCATCTATAAATG+TGG - chr2.4:14898989-14899008 MS.gene94622:intron 15.0%
!!! AATGTAATTTGTTCATTTTT+GGG - chr2.4:14898861-14898880 MS.gene94622:intron 15.0%
!!! GTAATCAATTTCTAAAATTA+TGG - chr2.4:14897807-14897826 MS.gene94622:intron 15.0%
!!! TAAGGATTTCTATAATTTTA+TGG - chr2.4:14899961-14899980 MS.gene94622:CDS 15.0%
!!! TATGTGATTGAAATTTTTTT+AGG - chr2.4:14900286-14900305 MS.gene94622:intron 15.0%
!! AAAAATTCTAATGCTGTTAA+TGG - chr2.4:14900085-14900104 MS.gene94622:intron 20.0%
!! AAACGATCAATTTAAAAGTT+TGG + chr2.4:14897515-14897534 None:intergenic 20.0%
!! AAATACAAAGAATTCAAACT+AGG + chr2.4:14897921-14897940 None:intergenic 20.0%
!! AATACAAAGAATTCAAACTA+GGG + chr2.4:14897920-14897939 None:intergenic 20.0%
!! AGTTTAATATAGAGAGAAAT+TGG + chr2.4:14899720-14899739 None:intergenic 20.0%
!! GAAAAAACTAAACTGAAAAT+TGG - chr2.4:14899336-14899355 MS.gene94622:intron 20.0%
!! TACTAATAGAAAAGAACAAT+CGG + chr2.4:14900559-14900578 None:intergenic 20.0%
!! TATTCAAAGAAATATCAATG+AGG - chr2.4:14900035-14900054 MS.gene94622:intron 20.0%
!! TTAACTAATTAGAACAAGTT+TGG - chr2.4:14900349-14900368 MS.gene94622:intron 20.0%
!! TTACCAAGTATAATTTACTT+GGG - chr2.4:14900963-14900982 MS.gene94622:CDS 20.0%
!!! AAATTACATTTTTGTAGACT+TGG + chr2.4:14898851-14898870 None:intergenic 20.0%
!!! ACATAGTATATTTAAGATCT+GGG - chr2.4:14897597-14897616 MS.gene94622:CDS 20.0%
!!! ACTAGTGTTTTTTTTTTTTG+TGG + chr2.4:14897638-14897657 None:intergenic 20.0%
!!! ACTTTGATTATTTTCTTTGA+GGG - chr2.4:14898646-14898665 MS.gene94622:intron 20.0%
!!! ATAGACTTACGTAATATTTT+TGG + chr2.4:14900164-14900183 None:intergenic 20.0%
!!! ATGTAATTTGTTCATTTTTG+GGG - chr2.4:14898862-14898881 MS.gene94622:intron 20.0%
!!! CTTTTTCAAAATTCAAATCA+TGG + chr2.4:14898247-14898266 None:intergenic 20.0%
!!! GTTACCGATTTTTAAAATTA+TGG - chr2.4:14898047-14898066 MS.gene94622:intron 20.0%
!!! TACGCCATAATTTTAAAAAT+CGG + chr2.4:14898054-14898073 None:intergenic 20.0%
!!! TACTTTGATTATTTTCTTTG+AGG - chr2.4:14898645-14898664 MS.gene94622:intron 20.0%
!!! TAGACTTACGTAATATTTTT+GGG + chr2.4:14900163-14900182 None:intergenic 20.0%
!!! TATATGCTTCTTTTTCAATA+TGG - chr2.4:14900934-14900953 MS.gene94622:intron 20.0%
!!! TGCTATTTTTATCCAAATTT+AGG - chr2.4:14899434-14899453 MS.gene94622:CDS 20.0%
!!! TTCAAATTAAAGTGTGTTTT+AGG - chr2.4:14897740-14897759 MS.gene94622:intron 20.0%
!!! TTCCAAACTTTTAAATTGAT+CGG - chr2.4:14897510-14897529 MS.gene94622:CDS 20.0%
!!! TTTAGGTTTCAATATATGTT+GGG - chr2.4:14897769-14897788 MS.gene94622:CDS 20.0%
!!! TTTGAATTAAAGTGTGTTTT+AGG - chr2.4:14897993-14898012 MS.gene94622:intron 20.0%
!!! TTTTTAAAAAACTCAGTATC+CGG - chr2.4:14900525-14900544 MS.gene94622:intron 20.0%
! AATTAATGTTGTGAACATCT+TGG + chr2.4:14899526-14899545 None:intergenic 25.0%
! AGTTTGGAAAATATTCATCA+CGG - chr2.4:14900365-14900384 MS.gene94622:intron 25.0%
! ATATATAGTGTTTGAGAAGA+TGG + chr2.4:14900917-14900936 None:intergenic 25.0%
! ATATGATTTAAAGAAGCCTT+TGG + chr2.4:14900840-14900859 None:intergenic 25.0%
! ATGAAAACCTAAACTTCTAT+TGG - chr2.4:14900858-14900877 MS.gene94622:intron 25.0%
! ATGGATTTAGACTTACAAAA+TGG + chr2.4:14900898-14900917 None:intergenic 25.0%
! ATTAATGTTGTGAACATCTT+GGG + chr2.4:14899525-14899544 None:intergenic 25.0%
! CTTGTTCAAAATTCAAATCA+TGG + chr2.4:14898276-14898295 None:intergenic 25.0%
! GGTGAATTTAGAAACATTTA+TGG + chr2.4:14898560-14898579 None:intergenic 25.0%
! GTGTTAAGAATAGTACTATA+TGG - chr2.4:14899396-14899415 MS.gene94622:intron 25.0%
! GTTACCAAGTATAATTTACT+TGG - chr2.4:14900962-14900981 MS.gene94622:CDS 25.0%
! TCAAATCATTGAATTGAACA+GGG - chr2.4:14898333-14898352 MS.gene94622:CDS 25.0%
! TTCAAATCATTGAATTGAAC+AGG - chr2.4:14898332-14898351 MS.gene94622:CDS 25.0%
! TTCACAAACACATAAAAACA+TGG + chr2.4:14898305-14898324 None:intergenic 25.0%
! TTTAGGTCTCAATATGTATT+AGG - chr2.4:14898010-14898029 MS.gene94622:intron 25.0%
! TTTCAATGAAGTAAGATACT+TGG + chr2.4:14900068-14900087 None:intergenic 25.0%
!! CAACTTTTCCTTCATAAAAT+AGG + chr2.4:14897389-14897408 None:intergenic 25.0%
!! CTATTTTATGAAGGAAAAGT+TGG - chr2.4:14897387-14897406 MS.gene94622:CDS 25.0%
!! CTTTAGGTTTCAATATATGT+TGG - chr2.4:14897768-14897787 MS.gene94622:CDS 25.0%
!! GACATAGTATATTTAAGATC+TGG - chr2.4:14897596-14897615 MS.gene94622:CDS 25.0%
!! GGATTTCTATAATTTTATGG+AGG - chr2.4:14899964-14899983 MS.gene94622:CDS 25.0%
!! TCCAAACTTTTAAATTGATC+GGG - chr2.4:14897511-14897530 MS.gene94622:CDS 25.0%
!! TCTAATATATTTGGCTTACT+AGG + chr2.4:14897465-14897484 None:intergenic 25.0%
!! TTCGGAAATTTTATAGAGTT+TGG - chr2.4:14898372-14898391 MS.gene94622:CDS 25.0%
!! TTTTTATCCAAATTTAGGTG+TGG - chr2.4:14899439-14899458 MS.gene94622:CDS 25.0%
!!! AGTGTTTTTTTTTTTTGTGG+TGG + chr2.4:14897635-14897654 None:intergenic 25.0%
!!! TCCTTTTTTAATTGCATTGA+GGG + chr2.4:14898930-14898949 None:intergenic 25.0%
!!! TGCTTTGATTTTCTAAACTT+AGG - chr2.4:14900404-14900423 MS.gene94622:intron 25.0%
!!! TTCCTTTTTTAATTGCATTG+AGG + chr2.4:14898931-14898950 None:intergenic 25.0%
ACCCGATCAATTTAAAAGTT+TGG + chr2.4:14897883-14897902 None:intergenic 30.0%
AGAAAAGAACAATCGGTATT+TGG + chr2.4:14900552-14900571 None:intergenic 30.0%
ATAATATAGGACAATCCAGT+TGG - chr2.4:14898722-14898741 MS.gene94622:intron 30.0%
ATCTCATGTTTGTGTGTTTA+AGG - chr2.4:14899943-14899962 MS.gene94622:intron 30.0%
ATTACTTGTCAAAACTGATG+AGG - chr2.4:14898775-14898794 MS.gene94622:CDS 30.0%
ATTGCAAGAAACATGAGATT+AGG + chr2.4:14900238-14900257 None:intergenic 30.0%
CAAGTAACCAATAGAAGTTT+AGG + chr2.4:14900868-14900887 None:intergenic 30.0%
CATGATTAACACTAGAAGAT+GGG + chr2.4:14899678-14899697 None:intergenic 30.0%
CTTCATAAAATAGGAAACCA+AGG + chr2.4:14897380-14897399 None:intergenic 30.0%
CTTTGTGACACCATTTAATA+AGG + chr2.4:14900122-14900141 None:intergenic 30.0%
GAAAAGAACAATCGGTATTT+GGG + chr2.4:14900551-14900570 None:intergenic 30.0%
GATCTAGACACCTTATTAAA+TGG - chr2.4:14900109-14900128 MS.gene94622:intron 30.0%
GTATAATTTACTTGGGTCAT+TGG - chr2.4:14900970-14900989 MS.gene94622:CDS 30.0%
TAGAAATAACAGCAACTTTG+TGG - chr2.4:14899839-14899858 MS.gene94622:intron 30.0%
TGACCCAAGTAAATTATACT+TGG + chr2.4:14900969-14900988 None:intergenic 30.0%
TTAATGTTGTGAACATCTTG+GGG + chr2.4:14899524-14899543 None:intergenic 30.0%
TTACAATGACACCGTAATTA+CGG - chr2.4:14898527-14898546 MS.gene94622:intron 30.0%
TTGATGCATGTTTGAATTGA+CGG + chr2.4:14898581-14898600 None:intergenic 30.0%
TTGCAAGAAACATGAGATTA+GGG + chr2.4:14900237-14900256 None:intergenic 30.0%
TTGCTGAATTTCACAAGTTA+AGG - chr2.4:14898484-14898503 MS.gene94622:intron 30.0%
TTGTTAATGCAACTTCTACA+TGG - chr2.4:14899796-14899815 MS.gene94622:intron 30.0%
! AATTTTATGGAGGACAACAA+TGG - chr2.4:14899974-14899993 MS.gene94622:CDS 30.0%
! ATGTCAAGAATTGATGACAA+TGG - chr2.4:14899612-14899631 MS.gene94622:CDS 30.0%
! CTAAACTTCTATTGGTTACT+TGG - chr2.4:14900866-14900885 MS.gene94622:intron 30.0%
! CTTGGTTTCCTATTTTATGA+AGG - chr2.4:14897378-14897397 MS.gene94622:CDS 30.0%
! GAAATGGTTTGAAATGCATA+CGG - chr2.4:14899139-14899158 MS.gene94622:intron 30.0%
! GAAATGGTTTGAAATGCATA+TGG - chr2.4:14899139-14899158 MS.gene94622:intron 30.0%
! GTATATTTAAGATCTGGGTT+TGG - chr2.4:14897602-14897621 MS.gene94622:CDS 30.0%
! TGAGTTTAGCTTAGTTGATA+AGG - chr2.4:14897569-14897588 MS.gene94622:CDS 30.0%
!! AAAAGCAGATTTGCTATTTG+TGG - chr2.4:14898440-14898459 MS.gene94622:intron 30.0%
!! ACTTGATTTTGAGAACAGTT+TGG - chr2.4:14899737-14899756 MS.gene94622:intron 30.0%
!! GAGATTAGGGTTTTAATCAT+TGG + chr2.4:14900224-14900243 None:intergenic 30.0%
!! GATTATTTTCTTTGAGGGTA+AGG - chr2.4:14898651-14898670 MS.gene94622:intron 30.0%
!! GTTTCTAGTTTGATTCTATC+AGG - chr2.4:14900442-14900461 MS.gene94622:intron 30.0%
!! TGAAGATGGATTAGAAGAAT+GGG - chr2.4:14897422-14897441 MS.gene94622:intron 30.0%
!!! TTTTGTGTTACTTGTGTAGA+TGG - chr2.4:14900750-14900769 MS.gene94622:intron 30.0%
AATCATTGAATTGAACAGGG+TGG - chr2.4:14898336-14898355 MS.gene94622:CDS 35.0%
ATCAAGCAACAACTTGAAGA+TGG - chr2.4:14899768-14899787 MS.gene94622:intron 35.0%
ATCGGTAACACCTTAATGAT+CGG + chr2.4:14898036-14898055 None:intergenic 35.0%
ATGTATTAGGCCGATCATTA+AGG - chr2.4:14898023-14898042 MS.gene94622:intron 35.0%
ATTTGACATTGCAGTTCTCA+TGG - chr2.4:14899571-14899590 MS.gene94622:CDS 35.0%
CCATCTTCTAGTGTTAATCA+TGG - chr2.4:14899676-14899695 MS.gene94622:intron 35.0%
CCATGATTAACACTAGAAGA+TGG + chr2.4:14899679-14899698 None:intergenic 35.0%
CTTGACATGTCTTTCAAAAG+AGG + chr2.4:14899600-14899619 None:intergenic 35.0%
GCCCTCAATGCAATTAAAAA+AGG - chr2.4:14898926-14898945 MS.gene94622:CDS 35.0%
GCTAATACCACACCTAAATT+TGG + chr2.4:14899449-14899468 None:intergenic 35.0%
GGGGTGAATAAATAAATGAG+AGG + chr2.4:14900676-14900695 None:intergenic 35.0%
GTCAATGTAACTGTGTACAA+TGG - chr2.4:14900488-14900507 MS.gene94622:intron 35.0%
TAATAGTGTAGTCAAGTCAG+TGG + chr2.4:14898807-14898826 None:intergenic 35.0%
TATGAAACCAAGAATTGCTG+AGG - chr2.4:14900315-14900334 MS.gene94622:intron 35.0%
TCAGGCCTTCAAAATTTCTT+GGG - chr2.4:14900773-14900792 MS.gene94622:intron 35.0%
TTCTTACCACATAGTCTTCT+GGG + chr2.4:14899487-14899506 None:intergenic 35.0%
TTGATTACCAACACGATGAT+TGG + chr2.4:14897795-14897814 None:intergenic 35.0%
TTGCTTTCACCAAACTTGAA+GGG + chr2.4:14900696-14900715 None:intergenic 35.0%
TTTGACATTGCAGTTCTCAT+GGG - chr2.4:14899572-14899591 MS.gene94622:CDS 35.0%
TTTGCTTTCACCAAACTTGA+AGG + chr2.4:14900697-14900716 None:intergenic 35.0%
TTTGTCACTCTTGTATTCCT+TGG - chr2.4:14897360-14897379 MS.gene94622:CDS 35.0%
! AAACCATTTCGCCTTTTATC+AGG + chr2.4:14899129-14899148 None:intergenic 35.0%
! CTTTGCCCAAGAAATTTTGA+AGG + chr2.4:14900781-14900800 None:intergenic 35.0%
! TTTATTCACCCCTTCAAGTT+TGG - chr2.4:14900684-14900703 MS.gene94622:intron 35.0%
! TTTTATCAGGACTTGTGCTT+GGG + chr2.4:14899116-14899135 None:intergenic 35.0%
!! GAAGATGGATTAGAAGAATG+GGG - chr2.4:14897423-14897442 MS.gene94622:intron 35.0%
!! GTGAAGATGGATTAGAAGAA+TGG - chr2.4:14897421-14897440 MS.gene94622:intron 35.0%
!! TGTGTTTTAGGTCACACTTT+AGG - chr2.4:14897752-14897771 MS.gene94622:CDS 35.0%
!! TTCATTTTTGGGGAGTCTTA+TGG - chr2.4:14898872-14898891 MS.gene94622:intron 35.0%
!! TTTCTTCTCAAGTGTTGATG+AGG + chr2.4:14900014-14900033 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGCTG+CGG + chr2.4:14897629-14897648 None:intergenic 35.0%
AATTGCTGACAGATGGTATG+CGG - chr2.4:14900255-14900274 MS.gene94622:CDS 40.0%
ACCATGTTTAGTGCTATGCA+GGG + chr2.4:14901016-14901035 None:intergenic 40.0%
ACTTGTCAAAACTGATGAGG+AGG - chr2.4:14898778-14898797 MS.gene94622:CDS 40.0%
AGATTGAAGACTACACTTGG+AGG - chr2.4:14898950-14898969 MS.gene94622:intron 40.0%
AGTCATAGGAAAGAGCGAAA+TGG - chr2.4:14899185-14899204 MS.gene94622:intron 40.0%
AGTCCTGATAAAAGGCGAAA+TGG - chr2.4:14899123-14899142 MS.gene94622:intron 40.0%
ATGGTGAGCAACCGTAATTA+CGG + chr2.4:14898541-14898560 None:intergenic 40.0%
CAAGCACAAGTCCTGATAAA+AGG - chr2.4:14899115-14899134 MS.gene94622:intron 40.0%
CTCAACCAAGTGAAATTCCT+TGG + chr2.4:14898420-14898439 None:intergenic 40.0%
CTTTCACTTCCGCAATATAG+AGG + chr2.4:14900812-14900831 None:intergenic 40.0%
GAAATTCCTTGGCTCCAAAT+TGG + chr2.4:14898409-14898428 None:intergenic 40.0%
GACAGAACTCCTCTATATTG+CGG - chr2.4:14900800-14900819 MS.gene94622:intron 40.0%
GATCTCATTTGTGCAACCAA+GGG - chr2.4:14900615-14900634 MS.gene94622:intron 40.0%
GCTCCAAATTGGAATCAAGA+GGG + chr2.4:14898398-14898417 None:intergenic 40.0%
GGAAGATTGAAGACTACACT+TGG - chr2.4:14898947-14898966 MS.gene94622:intron 40.0%
GGAAGTGAAAGAAAGACCAA+AGG - chr2.4:14900821-14900840 MS.gene94622:intron 40.0%
GTCAGGCCTTCAAAATTTCT+TGG - chr2.4:14900772-14900791 MS.gene94622:intron 40.0%
GTTCTTACCACATAGTCTTC+TGG + chr2.4:14899488-14899507 None:intergenic 40.0%
TCTTACCACATAGTCTTCTG+GGG + chr2.4:14899486-14899505 None:intergenic 40.0%
TCTTTCCTATGACTCGTGTT+TGG + chr2.4:14899179-14899198 None:intergenic 40.0%
TGATCTCATTTGTGCAACCA+AGG - chr2.4:14900614-14900633 MS.gene94622:intron 40.0%
TGCATAGCACTAAACATGGT+GGG - chr2.4:14901016-14901035 MS.gene94622:CDS 40.0%
TGCTTTCACCAAACTTGAAG+GGG + chr2.4:14900695-14900714 None:intergenic 40.0%
TTCTTGCAATTGCTGACAGA+TGG - chr2.4:14900248-14900267 MS.gene94622:CDS 40.0%
TTGACATTGCAGTTCTCATG+GGG - chr2.4:14899573-14899592 MS.gene94622:CDS 40.0%
TTGAGAACAGTTTGGCAGAA+AGG - chr2.4:14899745-14899764 MS.gene94622:intron 40.0%
TTTACTTGGGTCATTGGTGT+AGG - chr2.4:14900976-14900995 MS.gene94622:CDS 40.0%
TTTATCAGGACTTGTGCTTG+GGG + chr2.4:14899115-14899134 None:intergenic 40.0%
TTTCTCACCTCAGCAATTCT+TGG + chr2.4:14900325-14900344 None:intergenic 40.0%
! ATGGTTTGAAATGCATACGG+AGG - chr2.4:14899204-14899223 MS.gene94622:intron 40.0%
! CTTTTATCAGGACTTGTGCT+TGG + chr2.4:14899117-14899136 None:intergenic 40.0%
! TGTTACTTGTGTAGATGGTC+AGG - chr2.4:14900755-14900774 MS.gene94622:intron 40.0%
! TTGATTCCAATTTGGAGCCA+AGG - chr2.4:14898400-14898419 MS.gene94622:CDS 40.0%
!! ATTTTTGGGGAGTCTTATGG+TGG - chr2.4:14898875-14898894 MS.gene94622:intron 40.0%
!! GGAAAATTTGCTGCTACTCT+TGG - chr2.4:14898896-14898915 MS.gene94622:intron 40.0%
!! TTCTATTGGTTACTTGGTGC+TGG - chr2.4:14900872-14900891 MS.gene94622:intron 40.0%
!!! TACAGGGTTCAGTTTTGTTG+AGG - chr2.4:14898745-14898764 MS.gene94622:intron 40.0%
AAACTGAACCCTGTACCAAC+TGG + chr2.4:14898740-14898759 None:intergenic 45.0%
AACCATGGCCAATCATTCTC+TGG - chr2.4:14898185-14898204 MS.gene94622:intron 45.0%
AGAACAATCGGTATTTGGGC+CGG + chr2.4:14900547-14900566 None:intergenic 45.0%
CAACCAAGGGAACTGAATCT+TGG - chr2.4:14900628-14900647 MS.gene94622:intron 45.0%
CACCATGTTTAGTGCTATGC+AGG + chr2.4:14901017-14901036 None:intergenic 45.0%
CCAATCATTCTCTGGTTGCA+GGG - chr2.4:14898193-14898212 MS.gene94622:intron 45.0%
CTGCATAGCACTAAACATGG+TGG - chr2.4:14901015-14901034 MS.gene94622:CDS 45.0%
GGCTCCAAATTGGAATCAAG+AGG + chr2.4:14898399-14898418 None:intergenic 45.0%
TCCTATGACTCGTGTTTGGA+GGG + chr2.4:14899175-14899194 None:intergenic 45.0%
TGAATTGAACAGGGTGGTTC+AGG - chr2.4:14898342-14898361 MS.gene94622:CDS 45.0%
TGCAATTACACAGTCACCAG+CGG - chr2.4:14901039-14901058 MS.gene94622:CDS 45.0%
TGGAGCCAAGGAATTTCACT+TGG - chr2.4:14898412-14898431 MS.gene94622:CDS 45.0%
TGGAGTCTGTCCAAACATAC+CGG - chr2.4:14899080-14899099 MS.gene94622:intron 45.0%
TGGCCCTCTTGATTCCAATT+TGG - chr2.4:14898392-14898411 MS.gene94622:CDS 45.0%
TTATCAGGACTTGTGCTTGG+GGG + chr2.4:14899114-14899133 None:intergenic 45.0%
TTCCTATGACTCGTGTTTGG+AGG + chr2.4:14899176-14899195 None:intergenic 45.0%
! AACCAGAGAATGATTGGCCA+TGG + chr2.4:14898190-14898209 None:intergenic 45.0%
! AATGATTGGCCATGGTTTGG+AGG + chr2.4:14898182-14898201 None:intergenic 45.0%
! AGGACAATCCAGTTGGTACA+GGG - chr2.4:14898729-14898748 MS.gene94622:intron 45.0%
! ATGATTGGCCATGGTTTGGA+GGG + chr2.4:14898181-14898200 None:intergenic 45.0%
! GAGAATGATTGGCCATGGTT+TGG + chr2.4:14898185-14898204 None:intergenic 45.0%
! GTTGATGAGTTGCTAGCTCT+TGG - chr2.4:14900464-14900483 MS.gene94622:intron 45.0%
! TAGGACAATCCAGTTGGTAC+AGG - chr2.4:14898728-14898747 MS.gene94622:intron 45.0%
! TCACAGAAGCACACATGTTC+TGG - chr2.4:14898122-14898141 MS.gene94622:intron 45.0%
!! GGTGCTTTGAAGAGTGAAGA+TGG - chr2.4:14897408-14897427 MS.gene94622:intron 45.0%
!!! TTTTTTAAAAAAACATTATA+AGG - chr2.4:14899239-14899258 MS.gene94622:intron 5.0%
!!! TTTTTTAAAAAAGATTTTAT+TGG + chr2.4:14899231-14899250 None:intergenic 5.0%
ATCATTCTCTGGTTGCAGGG+AGG - chr2.4:14898196-14898215 MS.gene94622:intron 50.0%
CCCTGCAACCAGAGAATGAT+TGG + chr2.4:14898196-14898215 None:intergenic 50.0%
GAGCCAAGATTCAGTTCCCT+TGG + chr2.4:14900634-14900653 None:intergenic 50.0%
GATCTCCCCAGAAGACTATG+TGG - chr2.4:14899478-14899497 MS.gene94622:CDS 50.0%
GCCAATCATTCTCTGGTTGC+AGG - chr2.4:14898192-14898211 MS.gene94622:intron 50.0%
GCCCTGCATAGCACTAAACA+TGG - chr2.4:14901012-14901031 MS.gene94622:CDS 50.0%
GCTATGCAGGGCTGATCAAT+AGG + chr2.4:14901004-14901023 None:intergenic 50.0%
GGTGGTTCAGGAGTTGGATT+CGG - chr2.4:14898354-14898373 MS.gene94622:CDS 50.0%
GTGTGGTATTAGCAGACAGC+TGG - chr2.4:14899456-14899475 MS.gene94622:CDS 50.0%
TATCAGGACTTGTGCTTGGG+GGG + chr2.4:14899113-14899132 None:intergenic 50.0%
TGTTGGGCCAATCATCGTGT+TGG - chr2.4:14897785-14897804 MS.gene94622:intron 50.0%
TTACAGAAGCCCCTACAGAG+TGG - chr2.4:14898150-14898169 MS.gene94622:intron 50.0%
! CAGAAGCACACATGTTCTGG+TGG - chr2.4:14898125-14898144 MS.gene94622:intron 50.0%
AGGGATCCTCCACTCTGTAG+GGG + chr2.4:14898162-14898181 None:intergenic 55.0%
ATCAGGACTTGTGCTTGGGG+GGG + chr2.4:14899112-14899131 None:intergenic 55.0%
GAACAGGGTGGTTCAGGAGT+TGG - chr2.4:14898348-14898367 MS.gene94622:CDS 55.0%
GAGGGATCCTCCACTCTGTA+GGG + chr2.4:14898163-14898182 None:intergenic 55.0%
GCCCTCCAAACACGAGTCAT+AGG - chr2.4:14899171-14899190 MS.gene94622:intron 55.0%
TGGAGGATCCCTCCAAACCA+TGG - chr2.4:14898170-14898189 MS.gene94622:intron 55.0%
CAGAAGCCCCTACAGAGTGG+AGG - chr2.4:14898153-14898172 MS.gene94622:intron 60.0%
GACTCGTGTTTGGAGGGCTG+TGG + chr2.4:14899169-14899188 None:intergenic 60.0%
GGAGGGATCCTCCACTCTGT+AGG + chr2.4:14898164-14898183 None:intergenic 60.0%
GGGGCGTGGACCGGTATGTT+TGG + chr2.4:14899093-14899112 None:intergenic 65.0%
GACTTGTGCTTGGGGGGGCG+TGG + chr2.4:14899107-14899126 None:intergenic 70.0%
! GTGCTTGGGGGGGCGTGGAC+CGG + chr2.4:14899102-14899121 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 14897339 14901066 14897339 ID=MS.gene94622
chr2.4 mRNA 14897339 14901066 14897339 ID=MS.gene94622.t1;Parent=MS.gene94622
chr2.4 exon 14900940 14901066 14900940 ID=MS.gene94622.t1.exon1;Parent=MS.gene94622.t1
chr2.4 CDS 14900940 14901066 14900940 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14900183 14900277 14900183 ID=MS.gene94622.t1.exon2;Parent=MS.gene94622.t1
chr2.4 CDS 14900183 14900277 14900183 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14899944 14900051 14899944 ID=MS.gene94622.t1.exon3;Parent=MS.gene94622.t1
chr2.4 CDS 14899944 14900051 14899944 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14899434 14899674 14899434 ID=MS.gene94622.t1.exon4;Parent=MS.gene94622.t1
chr2.4 CDS 14899434 14899674 14899434 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14898906 14898949 14898906 ID=MS.gene94622.t1.exon5;Parent=MS.gene94622.t1
chr2.4 CDS 14898906 14898949 14898906 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14898753 14898820 14898753 ID=MS.gene94622.t1.exon6;Parent=MS.gene94622.t1
chr2.4 CDS 14898753 14898820 14898753 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14898545 14898650 14898545 ID=MS.gene94622.t1.exon7;Parent=MS.gene94622.t1
chr2.4 CDS 14898545 14898650 14898545 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14898232 14898440 14898232 ID=MS.gene94622.t1.exon8;Parent=MS.gene94622.t1
chr2.4 CDS 14898232 14898440 14898232 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14898069 14898138 14898069 ID=MS.gene94622.t1.exon9;Parent=MS.gene94622.t1
chr2.4 CDS 14898069 14898138 14898069 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14897891 14897941 14897891 ID=MS.gene94622.t1.exon10;Parent=MS.gene94622.t1
chr2.4 CDS 14897891 14897941 14897891 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14897741 14897793 14897741 ID=MS.gene94622.t1.exon11;Parent=MS.gene94622.t1
chr2.4 CDS 14897741 14897793 14897741 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14897504 14897636 14897504 ID=MS.gene94622.t1.exon12;Parent=MS.gene94622.t1
chr2.4 CDS 14897504 14897636 14897504 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
chr2.4 exon 14897339 14897407 14897339 ID=MS.gene94622.t1.exon13;Parent=MS.gene94622.t1
chr2.4 CDS 14897339 14897407 14897339 ID=cds.MS.gene94622.t1;Parent=MS.gene94622.t1
Gene Sequence

>MS.gene94622

ATGGAGAAGCTTTATGTGTTTTTTGTCACTCTTGTATTCCTTGGTTTCCTATTTTATGAAGGAAAAGTTGGTGCTTTGAAGAGTGAAGATGGATTAGAAGAATGGGGATATGTGCAAGTTAGACCTAGTAAGCCAAATATATTAGAATTGTGTAATTTCAATTATTTTGTTTTCCAAACTTTTAAATTGATCGTTTCATGATATTGTAAATACTAGTTTGAATGTCATCGTGAGTTTAGCTTAGTTGATAAGGACAAGACATAGTATATTTAAGATCTGGGTTTGGACCGCAGCCACCACAAAAAAAAAAAACACTAGTTTGAACTCTTTCTATTTCACTCATTTTAGTATATTTTAGTATAATAATAAAATATTATTTATTTATTTAAAAAAAAAAATAGTTCAAATTAAAGTGTGTTTTAGGTCACACTTTAGGTTTCAATATATGTTGGGCCAATCATCGTGTTGGTAATCAATTTCTAAAATTATGGTGTTAACTTAAACAATAATTGACATTACCATTTATTTTAAATTGTGTTTTCCAAACTTTTAAATTGATCGGGTCATGATATTGTAAACCCTAGTTTGAATTCTTTGTATTTCACTCATAAGTATAATAATACATACAATATTATTATTTCTATAAAAAAATAGTTTGAATTAAAGTGTGTTTTAGGTCTCAATATGTATTAGGCCGATCATTAAGGTGTTACCGATTTTTAAAATTATGGCGTAATTAACTTAAACAATAGTTGACATTACCATTTATTTTGAATTGTGTTATCACAGAAGCACACATGTTCTGGTGGCTTTACAGAAGCCCCTACAGAGTGGAGGATCCCTCCAAACCATGGCCAATCATTCTCTGGTTGCAGGGAGGACCTGTAAGTATTATTTGAATTAAGCCATGATTTGAATTTTGAAAAAGAAAAATCCATGATTTGAATTTTGAACAAGAAAAATCCATGTTTTTATGTGTTTGTGAAATGAAGTTTCAAATCATTGAATTGAACAGGGTGGTTCAGGAGTTGGATTCGGAAATTTTATAGAGTTTGGCCCTCTTGATTCCAATTTGGAGCCAAGGAATTTCACTTGGTTGAGAAAAGCAGATTTGCTATTTGTGGTAACTCATTTTTTTTTTTTTGTTGCTGAATTTCACAAGTTAAGGTAACTAAAATTTGACAAAAATTACAATGACACCGTAATTACGGTTGCTCACCATAAATGTTTCTAAATTCACCGTCAATTCAAACATGCATCAACTAATTCATGTCACTCTTGTTTTACTTTCTTTTTTTTTTTTGCATACTTTGATTATTTTCTTTGAGGGTAAGGTTCTCAACTTCTCATCACTCATATTAAATGCATTTTTTGTTGTTAATTATAATATAGGACAATCCAGTTGGTACAGGGTTCAGTTTTGTTGAGGATTCAAAATTACTTGTCAAAACTGATGAGGAGGCAGCCACTGACTTGACTACACTATTAATCAAGATATTTAATAATGATCCAAGTCTACAAAAATGTAATTTGTTCATTTTTGGGGAGTCTTATGGTGGAAAATTTGCTGCTACTCTTGGATTATCAGCCCTCAATGCAATTAAAAAAGGAAGATTGAAGACTACACTTGGAGGTATTATGATTTCCTTGAAATTTTTCATCTATAAATGTGGTTAGTAATTTCTTCTTTTGATAGATTATGTATTATTTGAATATAGATTTAAACATATATTTATCTAGTTGGAGTCTGTCCAAACATACCGGTCCACGCCCCCCCAAGCACAAGTCCTGATAAAAGGCGAAATGGTTTGAAATGCATATGGCACTCCACAGCCCTCCAAACACGAGTCATAGGAAAGAGCGAAATGGTTTGAAATGCATACGGAGGTCCAATAAAATCTTTTTTAAAAAAACATTATAAGGAATATGAAAACAAACTACTAAAATGATGAAATATAAAAGACTATATAGAAATCATTTCAAAGCAAAAATGAAAAGAAAAAACTAAACTGAAAATTGGATATATCACAAATAAAAATCATATTAAAGTCATAAATGTGTTAAGAATAGTACTATATGGTATTTCTCGACTTTATGCTATTTTTATCCAAATTTAGGTGTGGTATTAGCAGACAGCTGGATCTCCCCAGAAGACTATGTGGTAAGAACATAAATAATTCTACCCCAAGATGTTCACAACATTAATTTGAGCTTTCACTTTTTTAGCATTTAATTTGACATTGCAGTTCTCATGGGGTCCTCTTTTGAAAGACATGTCAAGAATTGATGACAATGGACTGCAAAAATCAAACATGTATGTAACAAATGTTTTCAGTCCCATCTTCTAGTGTTAATCATGGTATTGTAGAATTAATGTACCAATTTCTCTCTATATTAAACTTGATTTTGAGAACAGTTTGGCAGAAAGGATCAAGCAACAACTTGAAGATGGTGAATTTGTTAATGCAACTTCTACATGGATTCAACTTGAATATGTAATTAGAAATAACAGCAACTTTGTGGTACTAACTTACATTTTTATTCTTAACATATTTTAAATTATTAATAATATACATAAACCACTAATGAATAATTAATTTCTTTATCTCATGTTTGTGTGTTTAAGGATTTCTATAATTTTATGGAGGACAACAATGGAAGTTATTCAGCAACCTCATCAACACTTGAGAAGAAATTATTCAAAGAAATATCAATGAGGCGTTACTCCAAGTATCTTACTTCATTGAAAAATTCTAATGCTGTTAATGGTGATCTAGACACCTTATTAAATGGTGTCACAAAGAAAAAATTGAAGATCATTCCCAAAAATATTACGTAAGTCTATATAACTTTGAGAAATAAAAATAAATGTACTTAGAATTCCAATGATTAAAACCCTAATCTCATGTTTCTTGCAATTGCTGACAGATGGTATGCGGAGTCAGTTTATGTGATTGAAATTTTTTTAGGTGAATTTATGAAACCAAGAATTGCTGAGGTGAGAAAATATTTAACTAATTAGAACAAGTTTGGAAAATATTCATCACGGTTTCTTGTAAAAATTATGCTTTGATTTTCTAAACTTAGGTGATTTCTATTTGATGTTTCTAGTTTGATTCTATCAGGTTGATGAGTTGCTAGCTCTTGGAGTCAATGTAACTGTGTACAATGGACAAGTAAGTGTTCTTTTTAAAAAACTCAGTATCCGGCCCAAATACCGATTGTTCTTTTCTATTAGTAATCTTGCAAAAAAATTTTTTTTTACTGTTATAGCTTGATCTCATTTGTGCAACCAAGGGAACTGAATCTTGGCTCAAGAAACTCAAGTAAGCAACCTCTCATTTATTTATTCACCCCTTCAAGTTTGGTGAAAGCAAACATCAATTTCATAATTGTATTTTTTTTATTACTTTTTGTGTTACTTGTGTAGATGGTCAGGCCTTCAAAATTTCTTGGGCAAAGACAGAACTCCTCTATATTGCGGAAGTGAAAGAAAGACCAAAGGCTTCTTTAAATCATATGAAAACCTAAACTTCTATTGGTTACTTGGTGCTGGCCATTTTGTAAGTCTAAATCCATCTTCTCAAACACTATATATATGCTTCTTTTTCAATATGGATATAGTTACCAAGTATAATTTACTTGGGTCATTGGTGTAGGTACCTATTGATCAGCCCTGCATAGCACTAAACATGGTGGGTGCAATTACACAGTCACCAGCGGTTTGA
Protein sequence

>MS.gene94622.t1

MEKLYVFFVTLVFLGFLFYEGKVGALKSEDGLEEWGYVQVRPKAHMFWWLYRSPYRVEDPSKPWPIILWLQGGPGGSGVGFGNFIEFGPLDSNLEPRNFTWLRKADLLFVDNPVGTGFSFVEDSKLLVKTDEEAATDLTTLLIKIFNNDPSLQKCNLFIFGESYGGKFAATLGLSALNAIKKGRLKTTLGGVVLADSWISPEDYVFSWGPLLKDMSRIDDNGLQKSNILAERIKQQLEDGEFVNATSTWIQLEYVIRNNSNFVDFYNFMEDNNGSYSATSSTLEKKLFKEISMRRYSKYLTSLKNSNAVNGDLDTLLNGVTKKKLKIIPKNITWYAESVYVIEIFLGEFMKPRIAEVDELLALGVNVTVYNGQLDLICATKGTESWLKKLKWSGLQNFLGKDRTPLYCGSERKTKGFFKSYENLNFYWLLGAGHFVPIDQPCIALNMVGAITQSPAV