Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96354.t1 | XP_003610056.2 | 96.9 | 579 | 18 | 0 | 1 | 579 | 1 | 579 | 1.40E-281 | 978.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96354.t1 | Q9LVD8 | 68.9 | 524 | 132 | 10 | 1 | 500 | 1 | 517 | 3.6e-164 | 579.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96354.t1 | G7JUA8 | 96.9 | 579 | 18 | 0 | 1 | 579 | 1 | 579 | 1.0e-281 | 978.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052164 | MS.gene96354 | 0.811953 | 5.41E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene96354 | 0.803275 | 3.77E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene96354 | 0.805917 | 1.06E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene96354 | 0.815452 | 9.18E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene96354 | 0.800429 | 1.45E-48 | -1.69E-46 |
| MS.gene055751 | MS.gene96354 | 0.800631 | 1.32E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene96354 | 0.803984 | 2.68E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene96354 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene96354 | 0.805536 | 1.27E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene96354 | 0.835069 | 2.08E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene96354 | 0.809341 | 1.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96354.t1 | MTR_4g127440 | 97.064 | 579 | 17 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1177 |
| MS.gene96354.t1 | MTR_2g037980 | 68.509 | 597 | 165 | 7 | 1 | 579 | 1 | 592 | 0.0 | 755 |
| MS.gene96354.t1 | MTR_4g115420 | 50.000 | 514 | 225 | 8 | 2 | 511 | 4 | 489 | 3.48e-158 | 464 |
| MS.gene96354.t1 | MTR_0530s0020 | 37.363 | 546 | 293 | 12 | 21 | 559 | 6 | 509 | 1.59e-98 | 310 |
| MS.gene96354.t1 | MTR_4g114960 | 30.314 | 574 | 330 | 16 | 6 | 528 | 5 | 559 | 4.98e-71 | 239 |
| MS.gene96354.t1 | MTR_8g008860 | 31.429 | 595 | 325 | 18 | 6 | 543 | 5 | 573 | 1.00e-66 | 228 |
| MS.gene96354.t1 | MTR_3g106900 | 30.484 | 620 | 309 | 14 | 3 | 527 | 2 | 594 | 1.24e-63 | 221 |
| MS.gene96354.t1 | MTR_2g008170 | 32.302 | 582 | 317 | 16 | 8 | 527 | 7 | 573 | 2.23e-62 | 216 |
| MS.gene96354.t1 | MTR_3g080490 | 32.372 | 312 | 194 | 5 | 8 | 312 | 6 | 307 | 2.34e-52 | 193 |
| MS.gene96354.t1 | MTR_8g106040 | 28.205 | 312 | 204 | 8 | 7 | 308 | 5 | 306 | 3.96e-31 | 126 |
| MS.gene96354.t1 | MTR_6g059380 | 24.105 | 419 | 262 | 14 | 8 | 399 | 10 | 399 | 6.91e-21 | 96.7 |
| MS.gene96354.t1 | MTR_1g033880 | 26.036 | 338 | 199 | 13 | 1 | 324 | 1 | 301 | 7.25e-19 | 89.4 |
| MS.gene96354.t1 | MTR_3g086670 | 32.258 | 155 | 98 | 4 | 8 | 159 | 6 | 156 | 9.45e-17 | 82.0 |
| MS.gene96354.t1 | MTR_8g089850 | 28.877 | 187 | 119 | 6 | 34 | 217 | 31 | 206 | 1.73e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96354.t1 | AT5G57200 | 63.894 | 529 | 160 | 10 | 1 | 505 | 1 | 522 | 0.0 | 626 |
| MS.gene96354.t1 | AT4G25940 | 61.163 | 533 | 174 | 10 | 1 | 505 | 1 | 528 | 0.0 | 615 |
| MS.gene96354.t1 | AT2G01600 | 51.771 | 593 | 229 | 11 | 1 | 576 | 1 | 553 | 0.0 | 540 |
| MS.gene96354.t1 | AT1G14910 | 51.908 | 524 | 208 | 10 | 1 | 505 | 1 | 499 | 8.51e-179 | 521 |
| MS.gene96354.t1 | AT1G14910 | 50.954 | 524 | 208 | 11 | 1 | 505 | 1 | 494 | 5.69e-171 | 501 |
| MS.gene96354.t1 | AT5G35200 | 48.162 | 517 | 233 | 9 | 8 | 520 | 12 | 497 | 2.46e-152 | 449 |
| MS.gene96354.t1 | AT5G35200 | 48.162 | 517 | 233 | 9 | 8 | 520 | 12 | 497 | 2.46e-152 | 449 |
| MS.gene96354.t1 | AT1G03050 | 33.013 | 624 | 313 | 18 | 1 | 545 | 1 | 598 | 4.10e-82 | 269 |
| MS.gene96354.t1 | AT4G02650 | 30.272 | 588 | 326 | 16 | 8 | 528 | 7 | 577 | 7.78e-65 | 223 |
| MS.gene96354.t1 | AT4G32285 | 28.983 | 590 | 329 | 12 | 6 | 517 | 4 | 581 | 1.28e-64 | 223 |
| MS.gene96354.t1 | AT4G32285 | 28.983 | 590 | 329 | 12 | 6 | 517 | 4 | 581 | 1.28e-64 | 223 |
| MS.gene96354.t1 | AT1G05020 | 32.308 | 325 | 196 | 7 | 8 | 310 | 6 | 328 | 6.00e-50 | 183 |
| MS.gene96354.t1 | AT2G25430 | 43.182 | 176 | 87 | 5 | 8 | 179 | 6 | 172 | 2.33e-34 | 138 |
| MS.gene96354.t1 | AT2G25430 | 27.978 | 361 | 224 | 7 | 184 | 517 | 249 | 600 | 6.64e-27 | 115 |
| MS.gene96354.t1 | AT1G33340 | 26.861 | 309 | 201 | 9 | 7 | 306 | 9 | 301 | 4.80e-25 | 107 |
| MS.gene96354.t1 | AT4G40080 | 30.769 | 208 | 130 | 6 | 1 | 200 | 1 | 202 | 3.07e-20 | 93.2 |
| MS.gene96354.t1 | AT1G68110 | 27.778 | 324 | 181 | 11 | 5 | 308 | 2 | 292 | 1.64e-19 | 91.3 |
| MS.gene96354.t1 | AT1G25240 | 27.616 | 344 | 190 | 12 | 5 | 337 | 3 | 298 | 1.15e-16 | 82.4 |
| MS.gene96354.t1 | AT1G25240 | 27.616 | 344 | 190 | 12 | 5 | 337 | 2 | 297 | 1.31e-16 | 82.4 |
Find 123 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATATATGCAAAGCATTTA+TGG | 0.131077 | 8.1:-11382365 | None:intergenic |
| TCCTCTAGTTCTTGAGCTTT+TGG | 0.164263 | 8.1:-11383267 | None:intergenic |
| CATATCCATAACCTGCATTT+TGG | 0.171662 | 8.1:-11384031 | None:intergenic |
| GACCACAATCAATGTCTTTA+TGG | 0.184505 | 8.1:-11381360 | None:intergenic |
| CAAAATGCAGGTTATGGATA+TGG | 0.219437 | 8.1:+11384032 | MS.gene96354:CDS |
| AGGACTTACTATCCAATTTC+GGG | 0.252832 | 8.1:-11380998 | None:intergenic |
| AAGGACTTACTATCCAATTT+CGG | 0.269647 | 8.1:-11380999 | None:intergenic |
| CGTAGGCCTTTCTCCATGTT+TGG | 0.285097 | 8.1:-11380367 | None:intergenic |
| AATCCCATTTGTACGTTAGA+TGG | 0.309239 | 8.1:-11384131 | None:intergenic |
| CTTGCTTTGACTGATATAAC+TGG | 0.327035 | 8.1:+11383580 | MS.gene96354:CDS |
| CAAAGAACCTGTCTCAAAAC+TGG | 0.336881 | 8.1:-11382568 | None:intergenic |
| GCTTGTTCCTCAATTACTTC+AGG | 0.340855 | 8.1:-11383036 | None:intergenic |
| GGAACATCATTTGCTGTTGC+TGG | 0.351614 | 8.1:-11384178 | None:intergenic |
| CAACTCCAAAATGCAGGTTA+TGG | 0.355009 | 8.1:+11384026 | MS.gene96354:CDS |
| CTTCGAACGTGACGTTCCTT+AGG | 0.359965 | 8.1:-11380638 | None:intergenic |
| CCATCATTGTGTTGTGTTGT+TGG | 0.367456 | 8.1:-11384199 | None:intergenic |
| CCTGTACCTAGCTATTCTTA+TGG | 0.378000 | 8.1:+11384308 | MS.gene96354:CDS |
| TTGTTGAAAGCTGCTCCTTC+AGG | 0.378488 | 8.1:-11382014 | None:intergenic |
| TCGGGTCTTTAAAAGTCTCT+TGG | 0.403288 | 8.1:-11380980 | None:intergenic |
| CTTGGCTAGGCCAACCTTTG+TGG | 0.410064 | 8.1:-11380405 | None:intergenic |
| AAAATGCAGGTTATGGATAT+GGG | 0.415543 | 8.1:+11384033 | MS.gene96354:CDS |
| TGTTGAGGGTAATGAGTATA+TGG | 0.423576 | 8.1:-11384242 | None:intergenic |
| GCTTCCATCTAACGTACAAA+TGG | 0.433869 | 8.1:+11384127 | MS.gene96354:CDS |
| GCTTGAGTCATCTTTGAAGT+TGG | 0.438170 | 8.1:-11381465 | None:intergenic |
| TCCATTGTGGCAACAAAAGA+AGG | 0.438298 | 8.1:-11382669 | None:intergenic |
| TGAGCTGTTGGAGCAGTTAC+CGG | 0.447693 | 8.1:+11381837 | MS.gene96354:CDS |
| CACCCTCTCTCAATATCCTA+TGG | 0.449857 | 8.1:-11381382 | None:intergenic |
| GCTTGGCGGGTGTGGTTGCT+TGG | 0.456794 | 8.1:-11383637 | None:intergenic |
| ATATAAAAGAGCTGGCCAAC+AGG | 0.457370 | 8.1:+11382384 | MS.gene96354:CDS |
| GAAATTGAAAATTTCTTGCA+AGG | 0.463221 | 8.1:-11382546 | None:intergenic |
| ACATTATATTGTAGCTCCCT+TGG | 0.463935 | 8.1:-11384343 | None:intergenic |
| AATGATGGAATCATAAAACT+TGG | 0.466717 | 8.1:+11382226 | MS.gene96354:CDS |
| GTAGCTCCCTTGGTGGGGCA+TGG | 0.468303 | 8.1:-11384333 | None:intergenic |
| AGCTTGGGATTGTTCTGCAT+GGG | 0.472936 | 8.1:+11381576 | MS.gene96354:intron |
| TTATATTGTAGCTCCCTTGG+TGG | 0.482489 | 8.1:-11384340 | None:intergenic |
| AATCATAAAACTTGGGGATG+TGG | 0.485534 | 8.1:+11382234 | MS.gene96354:CDS |
| GGAGGAAGAACCTGTTGAAA+AGG | 0.487082 | 8.1:+11383071 | MS.gene96354:CDS |
| TATGGCTGCTGCTGCTGGTA+AGG | 0.487312 | 8.1:-11384224 | None:intergenic |
| ATATATAGTTCCCTCAATGA+TGG | 0.487443 | 8.1:+11382211 | MS.gene96354:CDS |
| GAGTATATGGCTGCTGCTGC+TGG | 0.488868 | 8.1:-11384229 | None:intergenic |
| TACCAAGCTCTTAACACTGC+CGG | 0.491863 | 8.1:-11382721 | None:intergenic |
| ACGTTATTCGATACTGCAAA+TGG | 0.496974 | 8.1:-11384101 | None:intergenic |
| CAGCTTGGGATTGTTCTGCA+TGG | 0.497130 | 8.1:+11381575 | MS.gene96354:intron |
| AACAAGTGCAAGTTCCCAAC+CGG | 0.499520 | 8.1:-11383608 | None:intergenic |
| AAAGATGACTCAAGCCCTCT+AGG | 0.500214 | 8.1:+11381473 | MS.gene96354:CDS |
| CTTAAAGATTCCACAAAGGT+TGG | 0.501161 | 8.1:+11380395 | MS.gene96354:CDS |
| AATACAGTATGCATTGGCCT+TGG | 0.502727 | 8.1:+11382043 | MS.gene96354:CDS |
| TATATTGTAGCTCCCTTGGT+GGG | 0.503564 | 8.1:-11384339 | None:intergenic |
| ACAGGTAAAGGATCTGCAAA+TGG | 0.505096 | 8.1:-11384290 | None:intergenic |
| TAAACTACTCACACAGAGTA+CGG | 0.506289 | 8.1:+11381429 | MS.gene96354:CDS |
| GATCTGACGCTTGGCGGGTG+TGG | 0.507629 | 8.1:-11383645 | None:intergenic |
| ATGATGGAATCATAAAACTT+GGG | 0.507727 | 8.1:+11382227 | MS.gene96354:CDS |
| ATCCGGCAGTGTTAAGAGCT+TGG | 0.509275 | 8.1:+11382719 | MS.gene96354:CDS |
| CTTGTATTCGCTATTGACCT+TGG | 0.509420 | 8.1:-11380423 | None:intergenic |
| AACCAATTAATTTACCTAGA+GGG | 0.510144 | 8.1:-11381487 | None:intergenic |
| ACTAGAGGATAGCAATGCTT+TGG | 0.510779 | 8.1:+11383281 | MS.gene96354:CDS |
| CTTTAAAAGTCTCTTGGAAA+GGG | 0.510839 | 8.1:-11380974 | None:intergenic |
| TAAAGAGCCTGAAGTAATTG+AGG | 0.518081 | 8.1:+11383029 | MS.gene96354:CDS |
| CCATAAGAATAGCTAGGTAC+AGG | 0.520449 | 8.1:-11384308 | None:intergenic |
| TTCAACAAAATTATCATCGC+CGG | 0.521419 | 8.1:+11381675 | MS.gene96354:CDS |
| CGAACGTGACGTTCCTTAGG+TGG | 0.523533 | 8.1:-11380635 | None:intergenic |
| CTTCCATCTAACGTACAAAT+GGG | 0.525118 | 8.1:+11384128 | MS.gene96354:CDS |
| GCGGGTGTGGTTGCTTGGCG+TGG | 0.527690 | 8.1:-11383632 | None:intergenic |
| GAATAGCTAGGTACAGGTAA+AGG | 0.532228 | 8.1:-11384302 | None:intergenic |
| CAATTTCAACTCCAAAATGC+AGG | 0.534331 | 8.1:+11384020 | MS.gene96354:CDS |
| ATTCGCTATTGACCTTGGCT+AGG | 0.534898 | 8.1:-11380418 | None:intergenic |
| TAAAGAAGTTGCTGCAGCGC+CGG | 0.535135 | 8.1:-11381856 | None:intergenic |
| CAAGGTCAATAGCGAATACA+AGG | 0.535569 | 8.1:+11380424 | MS.gene96354:CDS |
| CCTCCTTTGATATTGACTGA+TGG | 0.535897 | 8.1:+11383117 | MS.gene96354:CDS |
| AAAGAATTAGCACCTACATC+CGG | 0.539766 | 8.1:+11382702 | MS.gene96354:CDS |
| CTCTTAACACTGCCGGATGT+AGG | 0.539870 | 8.1:-11382714 | None:intergenic |
| AACGTTCCAAACATGGAGAA+AGG | 0.540341 | 8.1:+11380361 | MS.gene96354:CDS |
| AAGATACATCTGTCCTTGGT+TGG | 0.540758 | 8.1:-11380939 | None:intergenic |
| AGACATTGATTGTGGTCCAT+AGG | 0.541032 | 8.1:+11381366 | MS.gene96354:CDS |
| GAATGGGAACGTTCCAAACA+TGG | 0.543086 | 8.1:+11380354 | None:intergenic |
| CAGTAAGATACATCTGTCCT+TGG | 0.544316 | 8.1:-11380943 | None:intergenic |
| TCTTTAAAAGTCTCTTGGAA+AGG | 0.544834 | 8.1:-11380975 | None:intergenic |
| ATATTGTAGCTCCCTTGGTG+GGG | 0.545509 | 8.1:-11384338 | None:intergenic |
| GGAACAAGCTGAAGAAATCA+AGG | 0.545522 | 8.1:+11383050 | MS.gene96354:CDS |
| CGCATAACTGACATCTGTTG+AGG | 0.547138 | 8.1:-11384257 | None:intergenic |
| TATAACTGGAACTACCGGTT+GGG | 0.551154 | 8.1:+11383594 | MS.gene96354:CDS |
| ACTGATATAACTGGAACTAC+CGG | 0.551332 | 8.1:+11383589 | MS.gene96354:CDS |
| TTGCATATATATAAAAGAGC+TGG | 0.556713 | 8.1:+11382376 | MS.gene96354:CDS |
| GATTTCTATGAATACTGCAA+GGG | 0.562059 | 8.1:+11382517 | MS.gene96354:CDS |
| CCAACAACACAACACAATGA+TGG | 0.562567 | 8.1:+11384199 | MS.gene96354:CDS |
| ATATAACTGGAACTACCGGT+TGG | 0.562685 | 8.1:+11383593 | MS.gene96354:CDS |
| TTATCTAATACAGTATGCAT+TGG | 0.563712 | 8.1:+11382037 | MS.gene96354:CDS |
| GTACACACTTTAGTTGAAGC+CGG | 0.565892 | 8.1:-11381694 | None:intergenic |
| TTTAATGTATTCTTCCATTG+TGG | 0.566798 | 8.1:-11382682 | None:intergenic |
| GTTGACTAGTGATGAGCTGT+TGG | 0.572215 | 8.1:+11381825 | MS.gene96354:CDS |
| TAACCATCAGTCAATATCAA+AGG | 0.572753 | 8.1:-11383120 | None:intergenic |
| TGATTTCTATGAATACTGCA+AGG | 0.574437 | 8.1:+11382516 | MS.gene96354:CDS |
| TTTAATATATTGCAGCCTGA+AGG | 0.575503 | 8.1:+11381999 | MS.gene96354:intron |
| GCATAACTGACATCTGTTGA+GGG | 0.576695 | 8.1:-11384256 | None:intergenic |
| CTTATGTTGAGTCAGGCTGG+TGG | 0.578694 | 8.1:+11383945 | MS.gene96354:intron |
| TGATGGAATCATAAAACTTG+GGG | 0.581076 | 8.1:+11382228 | MS.gene96354:CDS |
| TCCAAAAGCTCAAGAACTAG+AGG | 0.581217 | 8.1:+11383266 | MS.gene96354:CDS |
| TGCCATAAAGACATTGATTG+TGG | 0.582804 | 8.1:+11381358 | MS.gene96354:CDS |
| AAATGCAGGTTATGGATATG+GGG | 0.588854 | 8.1:+11384034 | MS.gene96354:CDS |
| TATGGCTCCATGCCCCACCA+AGG | 0.592209 | 8.1:+11384326 | MS.gene96354:CDS |
| TCACGTAGAATATCCACCTA+AGG | 0.594813 | 8.1:+11380622 | MS.gene96354:CDS |
| CACAAAGGTTGGCCTAGCCA+AGG | 0.595430 | 8.1:+11380406 | MS.gene96354:CDS |
| GCACTTGCAATCATACCACC+TGG | 0.601842 | 8.1:+11383303 | MS.gene96354:CDS |
| TGCTGATTATAACTATTGAA+CGG | 0.604102 | 8.1:-11384074 | None:intergenic |
| GGAATCTTTAAGAGCTCCGT+AGG | 0.604329 | 8.1:-11380384 | None:intergenic |
| ATGGAGCCATAAGAATAGCT+AGG | 0.606959 | 8.1:-11384314 | None:intergenic |
| ATGGCTCCATGCCCCACCAA+GGG | 0.615353 | 8.1:+11384327 | MS.gene96354:CDS |
| CCATCAGTCAATATCAAAGG+AGG | 0.615938 | 8.1:-11383117 | None:intergenic |
| TGTATGAAGATGAAAATGCA+AGG | 0.616696 | 8.1:+11383994 | MS.gene96354:CDS |
| GTCCATAGGATATTGAGAGA+GGG | 0.628415 | 8.1:+11381380 | MS.gene96354:CDS |
| CTACATCAGCTCACCAACCA+AGG | 0.628734 | 8.1:+11380926 | MS.gene96354:CDS |
| TGAAAAGGAACAAACAGAGA+AGG | 0.638172 | 8.1:+11383086 | MS.gene96354:CDS |
| GGTCCATAGGATATTGAGAG+AGG | 0.643905 | 8.1:+11381379 | MS.gene96354:CDS |
| CCAAGCGTCAGATCAAAACA+TGG | 0.646274 | 8.1:+11383654 | MS.gene96354:CDS |
| AATGCAGGTTATGGATATGG+GGG | 0.651296 | 8.1:+11384035 | MS.gene96354:CDS |
| CAAACATGGAGAAAGGCCTA+CGG | 0.670628 | 8.1:+11380368 | MS.gene96354:CDS |
| GTGGCAACAAAAGAAGGTGG+TGG | 0.682709 | 8.1:-11382663 | None:intergenic |
| ATTGTGGCAACAAAAGAAGG+TGG | 0.687309 | 8.1:-11382666 | None:intergenic |
| ATCTAGGCCTTACCACCAGG+TGG | 0.699605 | 8.1:-11383318 | None:intergenic |
| ATACTTGACAGCAAACAAGT+CGG | 0.715673 | 8.1:-11381879 | None:intergenic |
| ACAAGCTGAAGAAATCAAGG+AGG | 0.720996 | 8.1:+11383053 | MS.gene96354:CDS |
| AGCTCTTAAAGATTCCACAA+AGG | 0.721390 | 8.1:+11380391 | MS.gene96354:CDS |
| CTTGCAATCATACCACCTGG+TGG | 0.732489 | 8.1:+11383306 | MS.gene96354:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATGTGAATATT+GGG | - | chr8.1:11380516-11380535 | None:intergenic | 10.0% |
| !! | AGAAATAATTAACACAATAT+TGG | - | chr8.1:11380873-11380892 | None:intergenic | 15.0% |
| !! | AGCATAAATATAATTCAATT+TGG | - | chr8.1:11382448-11382467 | None:intergenic | 15.0% |
| !! | ATAAGTTTAATATTCCAATT+TGG | - | chr8.1:11380842-11380861 | None:intergenic | 15.0% |
| !! | ATATTTGAAAAATTTCTTGA+TGG | + | chr8.1:11380726-11380745 | MS.gene96354:intron | 15.0% |
| !! | GAAAATAAAAATGTGAATAT+TGG | - | chr8.1:11380517-11380536 | None:intergenic | 15.0% |
| !! | TTATAAGAAAAAGTTAGATT+TGG | + | chr8.1:11381908-11381927 | MS.gene96354:intron | 15.0% |
| !!! | TCAAGAAATTTTTCAAATAT+TGG | - | chr8.1:11380726-11380745 | None:intergenic | 15.0% |
| !!! | TTTTTTCATTTTGTTATCAT+AGG | + | chr8.1:11380568-11380587 | MS.gene96354:intron | 15.0% |
| !! | AAAACTAAATATTCATACCA+AGG | - | chr8.1:11382063-11382082 | None:intergenic | 20.0% |
| !! | AAGTAAGAAAATCTTAGAAT+TGG | - | chr8.1:11383536-11383555 | None:intergenic | 20.0% |
| !! | AATCAACTATCATATAATCT+AGG | - | chr8.1:11383337-11383356 | None:intergenic | 20.0% |
| !! | AATTACAAAATATGCTTGTT+TGG | + | chr8.1:11383462-11383481 | MS.gene96354:intron | 20.0% |
| !! | ACTTTGGTTATAAACTTATA+TGG | + | chr8.1:11383160-11383179 | MS.gene96354:intron | 20.0% |
| !! | AGAAATGAAAACAATACAAT+AGG | + | chr8.1:11380815-11380834 | MS.gene96354:intron | 20.0% |
| !! | ATGTACATGTATGTTAATAA+AGG | + | chr8.1:11382940-11382959 | MS.gene96354:intron | 20.0% |
| !! | ATTTCAAACATATACTAGTT+TGG | + | chr8.1:11381141-11381160 | MS.gene96354:intron | 20.0% |
| !! | GAAATGAAAACAATACAATA+GGG | + | chr8.1:11380816-11380835 | MS.gene96354:intron | 20.0% |
| !! | GGAAAATTAACAAACATAAT+AGG | - | chr8.1:11380768-11380787 | None:intergenic | 20.0% |
| !! | GTTATAAACTTATATGGTAA+TGG | + | chr8.1:11383166-11383185 | MS.gene96354:intron | 20.0% |
| !! | TAACTGAATAATGAAATTAC+AGG | + | chr8.1:11381334-11381353 | MS.gene96354:intron | 20.0% |
| !! | TATTAACATACATGTACATT+GGG | - | chr8.1:11382939-11382958 | None:intergenic | 20.0% |
| !! | TGTTAGAAAATATAATATGC+TGG | + | chr8.1:11383213-11383232 | MS.gene96354:intron | 20.0% |
| !! | TTATTAACATACATGTACAT+TGG | - | chr8.1:11382940-11382959 | None:intergenic | 20.0% |
| !! | TTCATTTGAATGAATAAAGA+AGG | - | chr8.1:11380539-11380558 | None:intergenic | 20.0% |
| !!! | AAATTTTGTCAAAATTACAG+TGG | - | chr8.1:11381083-11381102 | None:intergenic | 20.0% |
| !!! | AAGATTTTCTTACTTTATGT+AGG | + | chr8.1:11383541-11383560 | MS.gene96354:intron | 20.0% |
| !!! | AGGTAAATTAATTGGTTTTA+TGG | + | chr8.1:11381493-11381512 | MS.gene96354:intron | 20.0% |
| !!! | ATATATATGCAAAGCATTTA+TGG | - | chr8.1:11382368-11382387 | None:intergenic | 20.0% |
| !!! | TAACAATACTTTTTCTTGTA+TGG | + | chr8.1:11382154-11382173 | MS.gene96354:intron | 20.0% |
| ! | AAAAATGCAGTTCTTTGATA+TGG | + | chr8.1:11382330-11382349 | MS.gene96354:intron | 25.0% |
| ! | AAACCAATTAATTTACCTAG+AGG | - | chr8.1:11381491-11381510 | None:intergenic | 25.0% |
| ! | AACCAATTAATTTACCTAGA+GGG | - | chr8.1:11381490-11381509 | None:intergenic | 25.0% |
| ! | AACCTACATTAAGTATGAAA+AGG | - | chr8.1:11381021-11381040 | None:intergenic | 25.0% |
| ! | AAGCATGGTTAAATAAATGA+TGG | - | chr8.1:11383492-11383511 | None:intergenic | 25.0% |
| ! | ATTAACATACATGTACATTG+GGG | - | chr8.1:11382938-11382957 | None:intergenic | 25.0% |
| ! | GAAATTGAAAATTTCTTGCA+AGG | - | chr8.1:11382549-11382568 | None:intergenic | 25.0% |
| ! | TGGAAAGATGAAATTGAAAT+AGG | - | chr8.1:11380706-11380725 | None:intergenic | 25.0% |
| ! | TTATCTAATACAGTATGCAT+TGG | + | chr8.1:11382037-11382056 | MS.gene96354:CDS | 25.0% |
| ! | TTGCATATATATAAAAGAGC+TGG | + | chr8.1:11382376-11382395 | MS.gene96354:CDS | 25.0% |
| ! | TTTAATGTATTCTTCCATTG+TGG | - | chr8.1:11382685-11382704 | None:intergenic | 25.0% |
| ! | TTTGTAATTATTTGAGCATC+CGG | - | chr8.1:11383451-11383470 | None:intergenic | 25.0% |
| !! | AAATTCATTATCTAGTCTTC+CGG | + | chr8.1:11383429-11383448 | MS.gene96354:intron | 25.0% |
| !! | AATGATGGAATCATAAAACT+TGG | + | chr8.1:11382226-11382245 | MS.gene96354:CDS | 25.0% |
| !! | ATAGAATATTTCTGCAAAGA+AGG | - | chr8.1:11380905-11380924 | None:intergenic | 25.0% |
| !! | ATGATGGAATCATAAAACTT+GGG | + | chr8.1:11382227-11382246 | MS.gene96354:CDS | 25.0% |
| !! | CTAGTATATGTTTGAAATCA+CGG | - | chr8.1:11381139-11381158 | None:intergenic | 25.0% |
| !! | TAGAATATTTCTGCAAAGAA+GGG | - | chr8.1:11380904-11380923 | None:intergenic | 25.0% |
| !! | TGCTGATTATAACTATTGAA+CGG | - | chr8.1:11384077-11384096 | None:intergenic | 25.0% |
| !! | TTCTTCTAAAAATTGTGCAT+AGG | - | chr8.1:11381608-11381627 | None:intergenic | 25.0% |
| !! | TTGGGCTAGAAAATAAAAAT+TGG | - | chr8.1:11380498-11380517 | None:intergenic | 25.0% |
| !! | TTTTATGATTCCATCATTGA+GGG | - | chr8.1:11382224-11382243 | None:intergenic | 25.0% |
| !! | TTTTCGTATTAAGTTCAATG+AGG | + | chr8.1:11383865-11383884 | MS.gene96354:intron | 25.0% |
| !!! | ATTATTTTTGCTATGTATGC+AGG | + | chr8.1:11382480-11382499 | MS.gene96354:intron | 25.0% |
| !!! | CATTTTGTTATCATAGGAAT+TGG | + | chr8.1:11380574-11380593 | MS.gene96354:intron | 25.0% |
| !!! | TAAAGGTCATTTTTAACATC+AGG | + | chr8.1:11382957-11382976 | MS.gene96354:intron | 25.0% |
| !!! | TCTTTAGTTTCTTTTTCTTC+TGG | - | chr8.1:11383015-11383034 | None:intergenic | 25.0% |
| AAAATGCAGGTTATGGATAT+GGG | + | chr8.1:11384033-11384052 | MS.gene96354:CDS | 30.0% | |
| AAAATTTCTTGATGGAGCAT+TGG | + | chr8.1:11380734-11380753 | MS.gene96354:intron | 30.0% | |
| AAACATCATTATGAACCTGT+TGG | - | chr8.1:11382402-11382421 | None:intergenic | 30.0% | |
| AAGGACTTACTATCCAATTT+CGG | - | chr8.1:11381002-11381021 | None:intergenic | 30.0% | |
| AATTGTAATCTCAATCACAC+AGG | - | chr8.1:11383389-11383408 | None:intergenic | 30.0% | |
| ATAGCGTGTGATTAAAATTG+AGG | - | chr8.1:11381725-11381744 | None:intergenic | 30.0% | |
| ATATATAGTTCCCTCAATGA+TGG | + | chr8.1:11382211-11382230 | MS.gene96354:CDS | 30.0% | |
| ATATATTACACGAAGAATGC+AGG | - | chr8.1:11381286-11381305 | None:intergenic | 30.0% | |
| ATTGTAATCTCAATCACACA+GGG | - | chr8.1:11383388-11383407 | None:intergenic | 30.0% | |
| GATTTCTATGAATACTGCAA+GGG | + | chr8.1:11382517-11382536 | MS.gene96354:CDS | 30.0% | |
| GCTTTCATGTTTGTGAAATT+TGG | + | chr8.1:11383188-11383207 | MS.gene96354:intron | 30.0% | |
| TAACCATCAGTCAATATCAA+AGG | - | chr8.1:11383123-11383142 | None:intergenic | 30.0% | |
| TAGCGTGTGATTAAAATTGA+GGG | - | chr8.1:11381724-11381743 | None:intergenic | 30.0% | |
| TATCGAACAACAAAAAAGCA+TGG | - | chr8.1:11383507-11383526 | None:intergenic | 30.0% | |
| TGATGGAATCATAAAACTTG+GGG | + | chr8.1:11382228-11382247 | MS.gene96354:CDS | 30.0% | |
| TGATTTCTATGAATACTGCA+AGG | + | chr8.1:11382516-11382535 | MS.gene96354:CDS | 30.0% | |
| TGTATGAAGATGAAAATGCA+AGG | + | chr8.1:11383994-11384013 | MS.gene96354:CDS | 30.0% | |
| TTCAACAAAATTATCATCGC+CGG | + | chr8.1:11381675-11381694 | MS.gene96354:CDS | 30.0% | |
| TTCTCATCTTACAGGTTTAA+AGG | - | chr8.1:11383902-11383921 | None:intergenic | 30.0% | |
| TTTAATATATTGCAGCCTGA+AGG | + | chr8.1:11381999-11382018 | MS.gene96354:intron | 30.0% | |
| TTTCTAATTTCTTCTAACGC+AGG | - | chr8.1:11380800-11380819 | None:intergenic | 30.0% | |
| ! | CTTTAAAAGTCTCTTGGAAA+GGG | - | chr8.1:11380977-11380996 | None:intergenic | 30.0% |
| ! | GTCCTTTTCATACTTAATGT+AGG | + | chr8.1:11381016-11381035 | MS.gene96354:intron | 30.0% |
| ! | GTTTTATGATTCCATCATTG+AGG | - | chr8.1:11382225-11382244 | None:intergenic | 30.0% |
| ! | TCTTTAAAAGTCTCTTGGAA+AGG | - | chr8.1:11380978-11380997 | None:intergenic | 30.0% |
| ! | TGATGGTTATGATGATTTTC+TGG | + | chr8.1:11383134-11383153 | MS.gene96354:CDS | 30.0% |
| !! | AGAAGTATACGCTTTTATAG+CGG | + | chr8.1:11383358-11383377 | MS.gene96354:intron | 30.0% |
| !! | GATGATTTTCTGGTATACTT+TGG | + | chr8.1:11383144-11383163 | MS.gene96354:intron | 30.0% |
| !!! | TTTTCTTCTGGTTCTTCTTT+CGG | - | chr8.1:11383003-11383022 | None:intergenic | 30.0% |
| AAAGAATTAGCACCTACATC+CGG | + | chr8.1:11382702-11382721 | MS.gene96354:CDS | 35.0% | |
| AAATGCAGGTTATGGATATG+GGG | + | chr8.1:11384034-11384053 | MS.gene96354:CDS | 35.0% | |
| AATCATAAAACTTGGGGATG+TGG | + | chr8.1:11382234-11382253 | MS.gene96354:CDS | 35.0% | |
| AATCCCATTTGTACGTTAGA+TGG | - | chr8.1:11384134-11384153 | None:intergenic | 35.0% | |
| AATTATGTCAAATTCACCGC+CGG | - | chr8.1:11381052-11381071 | None:intergenic | 35.0% | |
| ACAATACAATAGGGCCAAAT+TGG | + | chr8.1:11380825-11380844 | MS.gene96354:intron | 35.0% | |
| ACATTATATTGTAGCTCCCT+TGG | - | chr8.1:11384346-11384365 | None:intergenic | 35.0% | |
| ACGTTATTCGATACTGCAAA+TGG | - | chr8.1:11384104-11384123 | None:intergenic | 35.0% | |
| ACTGATATAACTGGAACTAC+CGG | + | chr8.1:11383589-11383608 | MS.gene96354:CDS | 35.0% | |
| AGCCCTCTAGGTAAATTAAT+TGG | + | chr8.1:11381485-11381504 | MS.gene96354:intron | 35.0% | |
| AGCTCTTAAAGATTCCACAA+AGG | + | chr8.1:11380391-11380410 | MS.gene96354:CDS | 35.0% | |
| AGGACTTACTATCCAATTTC+GGG | - | chr8.1:11381001-11381020 | None:intergenic | 35.0% | |
| ATACTTGACAGCAAACAAGT+CGG | - | chr8.1:11381882-11381901 | None:intergenic | 35.0% | |
| CAAAATGCAGGTTATGGATA+TGG | + | chr8.1:11384032-11384051 | MS.gene96354:CDS | 35.0% | |
| CAATTTCAACTCCAAAATGC+AGG | + | chr8.1:11384020-11384039 | MS.gene96354:CDS | 35.0% | |
| CATCAATGTTCTCATCTTAC+AGG | - | chr8.1:11383910-11383929 | None:intergenic | 35.0% | |
| CCAAACAGAACTCTTTATGT+TGG | - | chr8.1:11383732-11383751 | None:intergenic | 35.0% | |
| CCAACATAAAGAGTTCTGTT+TGG | + | chr8.1:11383729-11383748 | MS.gene96354:intron | 35.0% | |
| CTTAAAGATTCCACAAAGGT+TGG | + | chr8.1:11380395-11380414 | MS.gene96354:CDS | 35.0% | |
| CTTCCATCTAACGTACAAAT+GGG | + | chr8.1:11384128-11384147 | MS.gene96354:CDS | 35.0% | |
| CTTGCTTTGACTGATATAAC+TGG | + | chr8.1:11383580-11383599 | MS.gene96354:CDS | 35.0% | |
| GACCACAATCAATGTCTTTA+TGG | - | chr8.1:11381363-11381382 | None:intergenic | 35.0% | |
| TAAACTACTCACACAGAGTA+CGG | + | chr8.1:11381429-11381448 | MS.gene96354:CDS | 35.0% | |
| TAAAGAGCCTGAAGTAATTG+AGG | + | chr8.1:11383029-11383048 | MS.gene96354:CDS | 35.0% | |
| TAATGTAGGTTTGTGTACAC+CGG | + | chr8.1:11381030-11381049 | MS.gene96354:intron | 35.0% | |
| TACCATTCAAAATTCAAGCG+AGG | - | chr8.1:11382300-11382319 | None:intergenic | 35.0% | |
| TGAAAAGGAACAAACAGAGA+AGG | + | chr8.1:11383086-11383105 | MS.gene96354:CDS | 35.0% | |
| TGTTGAGGGTAATGAGTATA+TGG | - | chr8.1:11384245-11384264 | None:intergenic | 35.0% | |
| TTGTAATCTCAATCACACAG+GGG | - | chr8.1:11383387-11383406 | None:intergenic | 35.0% | |
| ! | ATGTCAGAAAAGTGTAGGTA+AGG | + | chr8.1:11381250-11381269 | MS.gene96354:intron | 35.0% |
| ! | CATATCCATAACCTGCATTT+TGG | - | chr8.1:11384034-11384053 | None:intergenic | 35.0% |
| ! | TACCTACACTTTTCTGACAT+GGG | - | chr8.1:11381250-11381269 | None:intergenic | 35.0% |
| ! | TCTGTTTGTTCCTTTTCAAC+AGG | - | chr8.1:11383084-11383103 | None:intergenic | 35.0% |
| ! | TGCCATAAAGACATTGATTG+TGG | + | chr8.1:11381358-11381377 | MS.gene96354:CDS | 35.0% |
| ! | TTACCTACACTTTTCTGACA+TGG | - | chr8.1:11381251-11381270 | None:intergenic | 35.0% |
| !! | GACTTTTAAAGACCCGAAAT+TGG | + | chr8.1:11380986-11381005 | MS.gene96354:CDS | 35.0% |
| !!! | TCAATTTCCAGTTTTGAGAC+AGG | + | chr8.1:11382561-11382580 | MS.gene96354:CDS | 35.0% |
| !!! | TTTTGAGACAGGTTCTTTGT+TGG | + | chr8.1:11382572-11382591 | MS.gene96354:intron | 35.0% |
| AACGTTCCAAACATGGAGAA+AGG | + | chr8.1:11380361-11380380 | MS.gene96354:CDS | 40.0% | |
| AAGATACATCTGTCCTTGGT+TGG | - | chr8.1:11380942-11380961 | None:intergenic | 40.0% | |
| AATGCAGGTTATGGATATGG+GGG | + | chr8.1:11384035-11384054 | MS.gene96354:CDS | 40.0% | |
| ACAAGCTGAAGAAATCAAGG+AGG | + | chr8.1:11383053-11383072 | MS.gene96354:CDS | 40.0% | |
| ACAGGTAAAGGATCTGCAAA+TGG | - | chr8.1:11384293-11384312 | None:intergenic | 40.0% | |
| ACTAGAGGATAGCAATGCTT+TGG | + | chr8.1:11383281-11383300 | MS.gene96354:CDS | 40.0% | |
| ATATAAAAGAGCTGGCCAAC+AGG | + | chr8.1:11382384-11382403 | MS.gene96354:CDS | 40.0% | |
| ATATAACTGGAACTACCGGT+TGG | + | chr8.1:11383593-11383612 | MS.gene96354:CDS | 40.0% | |
| ATGGAGCCATAAGAATAGCT+AGG | - | chr8.1:11384317-11384336 | None:intergenic | 40.0% | |
| ATTGTGGCAACAAAAGAAGG+TGG | - | chr8.1:11382669-11382688 | None:intergenic | 40.0% | |
| ATTTCACTTAGACCCTGCAA+AGG | - | chr8.1:11383243-11383262 | None:intergenic | 40.0% | |
| CAAAGAACCTGTCTCAAAAC+TGG | - | chr8.1:11382571-11382590 | None:intergenic | 40.0% | |
| CAACTCCAAAATGCAGGTTA+TGG | + | chr8.1:11384026-11384045 | MS.gene96354:CDS | 40.0% | |
| CAAGGTCAATAGCGAATACA+AGG | + | chr8.1:11380424-11380443 | MS.gene96354:CDS | 40.0% | |
| CAGTAAGATACATCTGTCCT+TGG | - | chr8.1:11380946-11380965 | None:intergenic | 40.0% | |
| CCAACAACACAACACAATGA+TGG | + | chr8.1:11384199-11384218 | MS.gene96354:CDS | 40.0% | |
| CCATAAGAATAGCTAGGTAC+AGG | - | chr8.1:11384311-11384330 | None:intergenic | 40.0% | |
| CCATCAGTCAATATCAAAGG+AGG | - | chr8.1:11383120-11383139 | None:intergenic | 40.0% | |
| CCATCATTGTGTTGTGTTGT+TGG | - | chr8.1:11384202-11384221 | None:intergenic | 40.0% | |
| CCTGTACCTAGCTATTCTTA+TGG | + | chr8.1:11384308-11384327 | MS.gene96354:CDS | 40.0% | |
| CTGCATAGAGGAATCTGATT+AGG | - | chr8.1:11381558-11381577 | None:intergenic | 40.0% | |
| CTTCCTTCTTATGTTGAGTC+AGG | + | chr8.1:11383938-11383957 | MS.gene96354:intron | 40.0% | |
| CTTGTATTCGCTATTGACCT+TGG | - | chr8.1:11380426-11380445 | None:intergenic | 40.0% | |
| GAATAGCTAGGTACAGGTAA+AGG | - | chr8.1:11384305-11384324 | None:intergenic | 40.0% | |
| GCATAACTGACATCTGTTGA+GGG | - | chr8.1:11384259-11384278 | None:intergenic | 40.0% | |
| GCTTCCATCTAACGTACAAA+TGG | + | chr8.1:11384127-11384146 | MS.gene96354:CDS | 40.0% | |
| GCTTGTTCCTCAATTACTTC+AGG | - | chr8.1:11383039-11383058 | None:intergenic | 40.0% | |
| GGAACAAGCTGAAGAAATCA+AGG | + | chr8.1:11383050-11383069 | MS.gene96354:CDS | 40.0% | |
| GTACACACTTTAGTTGAAGC+CGG | - | chr8.1:11381697-11381716 | None:intergenic | 40.0% | |
| GTCCATAGGATATTGAGAGA+GGG | + | chr8.1:11381380-11381399 | MS.gene96354:CDS | 40.0% | |
| TATATTGTAGCTCCCTTGGT+GGG | - | chr8.1:11384342-11384361 | None:intergenic | 40.0% | |
| TCACGTAGAATATCCACCTA+AGG | + | chr8.1:11380622-11380641 | MS.gene96354:CDS | 40.0% | |
| TCCAAAAGCTCAAGAACTAG+AGG | + | chr8.1:11383266-11383285 | MS.gene96354:CDS | 40.0% | |
| TCCATTGTGGCAACAAAAGA+AGG | - | chr8.1:11382672-11382691 | None:intergenic | 40.0% | |
| TTATATTGTAGCTCCCTTGG+TGG | - | chr8.1:11384343-11384362 | None:intergenic | 40.0% | |
| ! | AATACAGTATGCATTGGCCT+TGG | + | chr8.1:11382043-11382062 | MS.gene96354:CDS | 40.0% |
| ! | ACCTTCTTTTGTTGCCACAA+TGG | + | chr8.1:11382668-11382687 | MS.gene96354:CDS | 40.0% |
| ! | AGACATTGATTGTGGTCCAT+AGG | + | chr8.1:11381366-11381385 | MS.gene96354:CDS | 40.0% |
| ! | CACCTCGCTTGAATTTTGAA+TGG | + | chr8.1:11382295-11382314 | MS.gene96354:intron | 40.0% |
| ! | CCTCCTTTGATATTGACTGA+TGG | + | chr8.1:11383117-11383136 | MS.gene96354:CDS | 40.0% |
| ! | TATAACTGGAACTACCGGTT+GGG | + | chr8.1:11383594-11383613 | MS.gene96354:CDS | 40.0% |
| ! | TCGGGTCTTTAAAAGTCTCT+TGG | - | chr8.1:11380983-11381002 | None:intergenic | 40.0% |
| !! | GCTTGAGTCATCTTTGAAGT+TGG | - | chr8.1:11381468-11381487 | None:intergenic | 40.0% |
| !!! | TCCTCTAGTTCTTGAGCTTT+TGG | - | chr8.1:11383270-11383289 | None:intergenic | 40.0% |
| AAAGATGACTCAAGCCCTCT+AGG | + | chr8.1:11381473-11381492 | MS.gene96354:CDS | 45.0% | |
| AACAAGTGCAAGTTCCCAAC+CGG | - | chr8.1:11383611-11383630 | None:intergenic | 45.0% | |
| AACAATCCCAAGCTGCATAG+AGG | - | chr8.1:11381570-11381589 | None:intergenic | 45.0% | |
| AATCATACCACCTGGTGGTA+AGG | + | chr8.1:11383311-11383330 | MS.gene96354:intron | 45.0% | |
| AGCTTGGGATTGTTCTGCAT+GGG | + | chr8.1:11381576-11381595 | MS.gene96354:intron | 45.0% | |
| AGGTTATGGATATGGGGGAA+CGG | + | chr8.1:11384040-11384059 | MS.gene96354:CDS | 45.0% | |
| ATAATCTAGGCCTTACCACC+AGG | - | chr8.1:11383324-11383343 | None:intergenic | 45.0% | |
| ATATTGTAGCTCCCTTGGTG+GGG | - | chr8.1:11384341-11384360 | None:intergenic | 45.0% | |
| ATTCGCTATTGACCTTGGCT+AGG | - | chr8.1:11380421-11380440 | None:intergenic | 45.0% | |
| CAAACATGGAGAAAGGCCTA+CGG | + | chr8.1:11380368-11380387 | MS.gene96354:CDS | 45.0% | |
| CACCCTCTCTCAATATCCTA+TGG | - | chr8.1:11381385-11381404 | None:intergenic | 45.0% | |
| CAGATTCCTCTATGCAGCTT+GGG | + | chr8.1:11381561-11381580 | MS.gene96354:intron | 45.0% | |
| CAGCCTGACTCAACATAAGA+AGG | - | chr8.1:11383944-11383963 | None:intergenic | 45.0% | |
| CCAAGCGTCAGATCAAAACA+TGG | + | chr8.1:11383654-11383673 | MS.gene96354:CDS | 45.0% | |
| CGCATAACTGACATCTGTTG+AGG | - | chr8.1:11384260-11384279 | None:intergenic | 45.0% | |
| CTTCTTATGTTGAGTCAGGC+TGG | + | chr8.1:11383942-11383961 | MS.gene96354:intron | 45.0% | |
| GGAGGAAGAACCTGTTGAAA+AGG | + | chr8.1:11383071-11383090 | MS.gene96354:CDS | 45.0% | |
| GGTCCATAGGATATTGAGAG+AGG | + | chr8.1:11381379-11381398 | MS.gene96354:CDS | 45.0% | |
| GTTGACTAGTGATGAGCTGT+TGG | + | chr8.1:11381825-11381844 | MS.gene96354:CDS | 45.0% | |
| TACCAAGCTCTTAACACTGC+CGG | - | chr8.1:11382724-11382743 | None:intergenic | 45.0% | |
| TCAGATTCCTCTATGCAGCT+TGG | + | chr8.1:11381560-11381579 | MS.gene96354:intron | 45.0% | |
| TTCTAACGCAGGCAATGTCA+TGG | - | chr8.1:11380789-11380808 | None:intergenic | 45.0% | |
| TTGTTGAAAGCTGCTCCTTC+AGG | - | chr8.1:11382017-11382036 | None:intergenic | 45.0% | |
| ! | AGGTGGTGGCTGTTTATTGT+AGG | - | chr8.1:11382652-11382671 | None:intergenic | 45.0% |
| ! | GGAATCTTTAAGAGCTCCGT+AGG | - | chr8.1:11380387-11380406 | None:intergenic | 45.0% |
| ! | TGCCCATGTCAGAAAAGTGT+AGG | + | chr8.1:11381245-11381264 | MS.gene96354:intron | 45.0% |
| !! | ATATGCTGGTTCACCTTTGC+AGG | + | chr8.1:11383227-11383246 | MS.gene96354:intron | 45.0% |
| !! | GGAACATCATTTGCTGTTGC+TGG | - | chr8.1:11384181-11384200 | None:intergenic | 45.0% |
| !! | TATGCTGGTTCACCTTTGCA+GGG | + | chr8.1:11383228-11383247 | MS.gene96354:intron | 45.0% |
| !!! | CCATGTTTTGATCTGACGCT+TGG | - | chr8.1:11383657-11383676 | None:intergenic | 45.0% |
| !!! | TGTTTTGATCTGACGCTTGG+CGG | - | chr8.1:11383654-11383673 | None:intergenic | 45.0% |
| ATCCGGCAGTGTTAAGAGCT+TGG | + | chr8.1:11382719-11382738 | MS.gene96354:CDS | 50.0% | |
| CAGCTTGGGATTGTTCTGCA+TGG | + | chr8.1:11381575-11381594 | MS.gene96354:intron | 50.0% | |
| CGTAGGCCTTTCTCCATGTT+TGG | - | chr8.1:11380370-11380389 | None:intergenic | 50.0% | |
| CTACATCAGCTCACCAACCA+AGG | + | chr8.1:11380926-11380945 | MS.gene96354:CDS | 50.0% | |
| CTCTTAACACTGCCGGATGT+AGG | - | chr8.1:11382717-11382736 | None:intergenic | 50.0% | |
| CTTATGTTGAGTCAGGCTGG+TGG | + | chr8.1:11383945-11383964 | MS.gene96354:intron | 50.0% | |
| CTTCGAACGTGACGTTCCTT+AGG | - | chr8.1:11380641-11380660 | None:intergenic | 50.0% | |
| CTTGCAATCATACCACCTGG+TGG | + | chr8.1:11383306-11383325 | MS.gene96354:CDS | 50.0% | |
| GCACTTGCAATCATACCACC+TGG | + | chr8.1:11383303-11383322 | MS.gene96354:CDS | 50.0% | |
| GTGGCAACAAAAGAAGGTGG+TGG | - | chr8.1:11382666-11382685 | None:intergenic | 50.0% | |
| TAAAGAAGTTGCTGCAGCGC+CGG | - | chr8.1:11381859-11381878 | None:intergenic | 50.0% | |
| TGAGCTGTTGGAGCAGTTAC+CGG | + | chr8.1:11381837-11381856 | MS.gene96354:CDS | 50.0% | |
| TGTAGGTTTGTGTACACCGG+CGG | + | chr8.1:11381033-11381052 | MS.gene96354:intron | 50.0% | |
| !! | GTTTTGATCTGACGCTTGGC+GGG | - | chr8.1:11383653-11383672 | None:intergenic | 50.0% |
| ATCTAGGCCTTACCACCAGG+TGG | - | chr8.1:11383321-11383340 | None:intergenic | 55.0% | |
| CGAACGTGACGTTCCTTAGG+TGG | - | chr8.1:11380638-11380657 | None:intergenic | 55.0% | |
| CTTGGCTAGGCCAACCTTTG+TGG | - | chr8.1:11380408-11380427 | None:intergenic | 55.0% | |
| GAGTATATGGCTGCTGCTGC+TGG | - | chr8.1:11384232-11384251 | None:intergenic | 55.0% | |
| TATGGCTGCTGCTGCTGGTA+AGG | - | chr8.1:11384227-11384246 | None:intergenic | 55.0% | |
| !! | CACAAAGGTTGGCCTAGCCA+AGG | + | chr8.1:11380406-11380425 | MS.gene96354:CDS | 55.0% |
| ATGGCTCCATGCCCCACCAA+GGG | + | chr8.1:11384327-11384346 | MS.gene96354:CDS | 60.0% | |
| TATGGCTCCATGCCCCACCA+AGG | + | chr8.1:11384326-11384345 | MS.gene96354:CDS | 60.0% | |
| GTAGCTCCCTTGGTGGGGCA+TGG | - | chr8.1:11384336-11384355 | None:intergenic | 65.0% | |
| ! | GATCTGACGCTTGGCGGGTG+TGG | - | chr8.1:11383648-11383667 | None:intergenic | 65.0% |
| ! | GCTTGGCGGGTGTGGTTGCT+TGG | - | chr8.1:11383640-11383659 | None:intergenic | 65.0% |
| GCGGGTGTGGTTGCTTGGCG+TGG | - | chr8.1:11383635-11383654 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 11380356 | 11384367 | 11380356 | ID=MS.gene96354 |
| chr8.1 | mRNA | 11380356 | 11384367 | 11380356 | ID=MS.gene96354.t1;Parent=MS.gene96354 |
| chr8.1 | exon | 11380356 | 11380445 | 11380356 | ID=MS.gene96354.t1.exon1;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11380356 | 11380445 | 11380356 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11380590 | 11380659 | 11380590 | ID=MS.gene96354.t1.exon2;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11380590 | 11380659 | 11380590 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11380914 | 11381011 | 11380914 | ID=MS.gene96354.t1.exon3;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11380914 | 11381011 | 11380914 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11381356 | 11381494 | 11381356 | ID=MS.gene96354.t1.exon4;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11381356 | 11381494 | 11381356 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11381578 | 11381708 | 11381578 | ID=MS.gene96354.t1.exon5;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11381578 | 11381708 | 11381578 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11381805 | 11381897 | 11381805 | ID=MS.gene96354.t1.exon6;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11381805 | 11381897 | 11381805 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11382014 | 11382064 | 11382014 | ID=MS.gene96354.t1.exon7;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11382014 | 11382064 | 11382014 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11382190 | 11382255 | 11382190 | ID=MS.gene96354.t1.exon8;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11382190 | 11382255 | 11382190 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11382340 | 11382405 | 11382340 | ID=MS.gene96354.t1.exon9;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11382340 | 11382405 | 11382340 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11382502 | 11382582 | 11382502 | ID=MS.gene96354.t1.exon10;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11382502 | 11382582 | 11382502 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11382663 | 11382740 | 11382663 | ID=MS.gene96354.t1.exon11;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11382663 | 11382740 | 11382663 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11382979 | 11383155 | 11382979 | ID=MS.gene96354.t1.exon12;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11382979 | 11383155 | 11382979 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11383249 | 11383327 | 11383249 | ID=MS.gene96354.t1.exon13;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11383249 | 11383327 | 11383249 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11383563 | 11383675 | 11383563 | ID=MS.gene96354.t1.exon14;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11383563 | 11383675 | 11383563 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| chr8.1 | exon | 11383960 | 11384367 | 11383960 | ID=MS.gene96354.t1.exon15;Parent=MS.gene96354.t1 |
| chr8.1 | CDS | 11383960 | 11384367 | 11383960 | ID=cds.MS.gene96354.t1;Parent=MS.gene96354.t1 |
| Gene Sequence |
| Protein sequence |
