Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97602.t1 | XP_003621331.1 | 85.2 | 365 | 54 | 0 | 2 | 366 | 3 | 367 | 4.10E-181 | 644 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97602.t1 | P93324 | 62.1 | 367 | 130 | 3 | 7 | 366 | 8 | 372 | 4.8e-130 | 465.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97602.t1 | G7L359 | 85.2 | 365 | 54 | 0 | 2 | 366 | 3 | 367 | 2.9e-181 | 644.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene97602 | 0.814019 | 1.91E-51 | -1.69E-46 |
MS.gene051127 | MS.gene97602 | 0.815732 | 7.95E-52 | -1.69E-46 |
MS.gene051138 | MS.gene97602 | 0.806535 | 7.85E-50 | -1.69E-46 |
MS.gene051844 | MS.gene97602 | 0.815355 | 9.65E-52 | -1.69E-46 |
MS.gene052211 | MS.gene97602 | 0.830551 | 2.76E-55 | -1.69E-46 |
MS.gene053887 | MS.gene97602 | 0.818964 | 1.49E-52 | -1.69E-46 |
MS.gene054146 | MS.gene97602 | 0.800009 | 1.76E-48 | -1.69E-46 |
MS.gene055124 | MS.gene97602 | 0.822476 | 2.32E-53 | -1.69E-46 |
MS.gene055240 | MS.gene97602 | 0.816595 | 5.10E-52 | -1.69E-46 |
MS.gene055959 | MS.gene97602 | 0.829724 | 4.39E-55 | -1.69E-46 |
MS.gene056218 | MS.gene97602 | 0.800033 | 1.74E-48 | -1.69E-46 |
MS.gene056224 | MS.gene97602 | 0.80371 | 3.06E-49 | -1.69E-46 |
MS.gene056748 | MS.gene97602 | 0.833577 | 4.92E-56 | -1.69E-46 |
MS.gene057544 | MS.gene97602 | 0.805597 | 1.24E-49 | -1.69E-46 |
MS.gene057550 | MS.gene97602 | 0.960113 | 3.42E-118 | -1.69E-46 |
MS.gene058093 | MS.gene97602 | 0.809314 | 2.01E-50 | -1.69E-46 |
MS.gene058099 | MS.gene97602 | 0.826834 | 2.18E-54 | -1.69E-46 |
MS.gene058109 | MS.gene97602 | 0.805996 | 1.02E-49 | -1.69E-46 |
MS.gene058171 | MS.gene97602 | 0.805115 | 1.56E-49 | -1.69E-46 |
MS.gene058175 | MS.gene97602 | 0.804181 | 2.44E-49 | -1.69E-46 |
MS.gene058603 | MS.gene97602 | 0.804136 | 2.50E-49 | -1.69E-46 |
MS.gene059037 | MS.gene97602 | 0.81304 | 3.13E-51 | -1.69E-46 |
MS.gene059045 | MS.gene97602 | 0.808074 | 3.70E-50 | -1.69E-46 |
MS.gene061157 | MS.gene97602 | 0.819077 | 1.40E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97602.t1 | MTR_7g011990 | 85.205 | 365 | 54 | 0 | 2 | 366 | 3 | 367 | 0.0 | 659 |
MS.gene97602.t1 | MTR_7g011900 | 78.108 | 370 | 74 | 3 | 2 | 366 | 3 | 370 | 0.0 | 599 |
MS.gene97602.t1 | MTR_7g012040 | 74.324 | 370 | 89 | 2 | 1 | 366 | 1 | 368 | 0.0 | 575 |
MS.gene97602.t1 | MTR_7g012020 | 72.432 | 370 | 97 | 2 | 1 | 366 | 1 | 369 | 0.0 | 568 |
MS.gene97602.t1 | MTR_7g012090 | 69.811 | 371 | 102 | 3 | 5 | 366 | 6 | 375 | 0.0 | 534 |
MS.gene97602.t1 | MTR_7g012070 | 68.182 | 374 | 109 | 3 | 2 | 366 | 3 | 375 | 0.0 | 531 |
MS.gene97602.t1 | MTR_2g055940 | 68.571 | 350 | 106 | 2 | 20 | 366 | 15 | 363 | 0.0 | 509 |
MS.gene97602.t1 | MTR_1g096310 | 62.125 | 367 | 130 | 3 | 7 | 366 | 8 | 372 | 7.31e-172 | 483 |
MS.gene97602.t1 | MTR_7g012020 | 74.275 | 276 | 66 | 2 | 1 | 272 | 1 | 275 | 2.08e-153 | 434 |
MS.gene97602.t1 | MTR_7g012020 | 75.099 | 253 | 58 | 2 | 1 | 249 | 1 | 252 | 1.67e-140 | 399 |
MS.gene97602.t1 | MTR_1g036460 | 49.866 | 373 | 174 | 6 | 3 | 366 | 2 | 370 | 6.87e-130 | 377 |
MS.gene97602.t1 | MTR_1g036490 | 48.525 | 373 | 179 | 6 | 3 | 366 | 2 | 370 | 1.73e-127 | 370 |
MS.gene97602.t1 | MTR_3g021440 | 52.125 | 353 | 159 | 6 | 20 | 366 | 22 | 370 | 2.24e-120 | 352 |
MS.gene97602.t1 | MTR_3g021430 | 51.247 | 361 | 166 | 6 | 12 | 366 | 1 | 357 | 8.31e-120 | 350 |
MS.gene97602.t1 | MTR_1g036510 | 48.533 | 375 | 178 | 7 | 1 | 366 | 16 | 384 | 6.58e-119 | 349 |
MS.gene97602.t1 | MTR_3g092900 | 45.330 | 364 | 188 | 7 | 8 | 366 | 6 | 363 | 5.13e-106 | 316 |
MS.gene97602.t1 | MTR_5g098170 | 40.503 | 358 | 198 | 8 | 18 | 366 | 12 | 363 | 3.34e-90 | 275 |
MS.gene97602.t1 | MTR_7g118300 | 40.000 | 365 | 209 | 7 | 7 | 366 | 16 | 375 | 8.55e-87 | 267 |
MS.gene97602.t1 | MTR_0591s0010 | 40.220 | 363 | 203 | 10 | 13 | 366 | 20 | 377 | 2.89e-85 | 263 |
MS.gene97602.t1 | MTR_7g118320 | 39.945 | 363 | 206 | 7 | 12 | 366 | 4 | 362 | 1.14e-83 | 258 |
MS.gene97602.t1 | MTR_1g050220 | 41.667 | 336 | 137 | 6 | 25 | 352 | 6 | 290 | 4.22e-81 | 250 |
MS.gene97602.t1 | MTR_1g036510 | 49.275 | 276 | 126 | 6 | 1 | 268 | 16 | 285 | 2.14e-80 | 248 |
MS.gene97602.t1 | MTR_8g068690 | 38.682 | 349 | 203 | 7 | 13 | 353 | 19 | 364 | 1.13e-79 | 249 |
MS.gene97602.t1 | MTR_8g068750 | 37.017 | 362 | 216 | 8 | 13 | 366 | 20 | 377 | 1.35e-78 | 246 |
MS.gene97602.t1 | MTR_8g068870 | 37.941 | 340 | 200 | 6 | 34 | 366 | 28 | 363 | 3.49e-75 | 237 |
MS.gene97602.t1 | MTR_8g024160 | 35.942 | 345 | 178 | 6 | 18 | 359 | 20 | 324 | 1.97e-70 | 223 |
MS.gene97602.t1 | MTR_8g068570 | 40.000 | 330 | 158 | 12 | 13 | 333 | 20 | 318 | 2.83e-69 | 220 |
MS.gene97602.t1 | MTR_6g060290 | 60.656 | 183 | 53 | 4 | 2 | 180 | 3 | 170 | 2.35e-68 | 213 |
MS.gene97602.t1 | MTR_1g036510 | 47.451 | 255 | 120 | 6 | 1 | 247 | 16 | 264 | 2.40e-68 | 216 |
MS.gene97602.t1 | MTR_6g078850 | 37.571 | 354 | 208 | 8 | 20 | 364 | 32 | 381 | 1.03e-65 | 216 |
MS.gene97602.t1 | MTR_2g072790 | 38.344 | 326 | 182 | 10 | 32 | 347 | 20 | 336 | 1.84e-61 | 201 |
MS.gene97602.t1 | MTR_3g096050 | 36.798 | 356 | 197 | 11 | 25 | 366 | 17 | 358 | 8.85e-59 | 194 |
MS.gene97602.t1 | MTR_8g068730 | 32.873 | 362 | 199 | 9 | 13 | 366 | 20 | 345 | 9.94e-57 | 189 |
MS.gene97602.t1 | MTR_8g068690 | 37.736 | 265 | 155 | 6 | 13 | 270 | 19 | 280 | 2.20e-54 | 181 |
MS.gene97602.t1 | MTR_3g096070 | 36.310 | 336 | 170 | 10 | 25 | 349 | 17 | 319 | 1.84e-53 | 180 |
MS.gene97602.t1 | MTR_0017s0100 | 34.891 | 321 | 192 | 10 | 40 | 352 | 44 | 355 | 5.11e-51 | 174 |
MS.gene97602.t1 | MTR_0079s0070 | 35.385 | 325 | 185 | 11 | 40 | 352 | 10 | 321 | 5.58e-51 | 173 |
MS.gene97602.t1 | MTR_4g038440 | 35.385 | 325 | 185 | 11 | 40 | 352 | 44 | 355 | 1.42e-50 | 173 |
MS.gene97602.t1 | MTR_3g083620 | 34.062 | 320 | 195 | 9 | 38 | 351 | 38 | 347 | 3.01e-50 | 172 |
MS.gene97602.t1 | MTR_8g068600 | 35.547 | 256 | 148 | 6 | 45 | 286 | 27 | 279 | 6.20e-46 | 159 |
MS.gene97602.t1 | MTR_1g076940 | 31.111 | 315 | 204 | 6 | 40 | 346 | 33 | 342 | 9.26e-44 | 155 |
MS.gene97602.t1 | MTR_5g074600 | 30.717 | 293 | 188 | 7 | 64 | 347 | 55 | 341 | 2.72e-43 | 154 |
MS.gene97602.t1 | MTR_3g096050 | 39.130 | 253 | 135 | 8 | 25 | 268 | 17 | 259 | 2.51e-42 | 149 |
MS.gene97602.t1 | MTR_8g068740 | 31.408 | 277 | 148 | 7 | 13 | 282 | 20 | 261 | 9.38e-40 | 142 |
MS.gene97602.t1 | MTR_7g014570 | 29.712 | 313 | 202 | 6 | 40 | 346 | 33 | 333 | 1.27e-39 | 144 |
MS.gene97602.t1 | MTR_4g033015 | 32.647 | 340 | 202 | 9 | 39 | 361 | 32 | 361 | 2.56e-39 | 143 |
MS.gene97602.t1 | MTR_5g074680 | 29.897 | 291 | 193 | 6 | 61 | 346 | 57 | 341 | 4.04e-39 | 143 |
MS.gene97602.t1 | MTR_5g074580 | 31.752 | 274 | 177 | 5 | 79 | 347 | 74 | 342 | 6.12e-39 | 142 |
MS.gene97602.t1 | MTR_4g088340 | 27.893 | 337 | 224 | 7 | 37 | 365 | 7 | 332 | 1.36e-38 | 140 |
MS.gene97602.t1 | MTR_4g033200 | 32.353 | 340 | 203 | 9 | 39 | 361 | 32 | 361 | 1.76e-38 | 141 |
MS.gene97602.t1 | MTR_7g024520 | 30.640 | 297 | 170 | 10 | 80 | 364 | 73 | 345 | 3.12e-38 | 140 |
MS.gene97602.t1 | MTR_4g079160 | 30.872 | 298 | 190 | 8 | 61 | 352 | 55 | 342 | 6.66e-38 | 139 |
MS.gene97602.t1 | MTR_4g088345 | 28.530 | 347 | 209 | 10 | 37 | 365 | 30 | 355 | 7.62e-38 | 139 |
MS.gene97602.t1 | MTR_7g024500 | 30.241 | 291 | 179 | 9 | 80 | 364 | 73 | 345 | 7.95e-38 | 139 |
MS.gene97602.t1 | MTR_4g088200 | 30.699 | 329 | 213 | 8 | 33 | 352 | 26 | 348 | 1.04e-37 | 139 |
MS.gene97602.t1 | MTR_7g014510 | 29.043 | 303 | 200 | 7 | 65 | 364 | 62 | 352 | 1.35e-37 | 139 |
MS.gene97602.t1 | MTR_5g074540 | 33.333 | 222 | 143 | 3 | 136 | 352 | 107 | 328 | 2.46e-36 | 135 |
MS.gene97602.t1 | MTR_4g033150 | 30.882 | 340 | 208 | 9 | 39 | 361 | 32 | 361 | 6.72e-36 | 134 |
MS.gene97602.t1 | MTR_8g068620 | 49.091 | 110 | 56 | 0 | 160 | 269 | 2 | 111 | 3.68e-34 | 122 |
MS.gene97602.t1 | MTR_4g088190 | 31.250 | 336 | 205 | 8 | 33 | 352 | 26 | 351 | 1.64e-32 | 125 |
MS.gene97602.t1 | MTR_5g074610 | 36.774 | 155 | 95 | 1 | 201 | 352 | 159 | 313 | 3.10e-30 | 118 |
MS.gene97602.t1 | MTR_1g076930 | 30.417 | 240 | 150 | 7 | 37 | 268 | 7 | 237 | 2.44e-28 | 111 |
MS.gene97602.t1 | MTR_4g033170 | 28.012 | 332 | 220 | 8 | 40 | 361 | 33 | 355 | 3.56e-27 | 110 |
MS.gene97602.t1 | MTR_4g038440 | 32.773 | 238 | 140 | 8 | 40 | 268 | 44 | 270 | 1.09e-26 | 107 |
MS.gene97602.t1 | MTR_4g033085 | 28.358 | 335 | 215 | 10 | 40 | 361 | 33 | 355 | 1.84e-25 | 105 |
MS.gene97602.t1 | MTR_6g060280 | 66.667 | 63 | 15 | 2 | 220 | 277 | 1 | 62 | 1.39e-19 | 82.4 |
MS.gene97602.t1 | MTR_0794s0020 | 29.075 | 227 | 139 | 7 | 39 | 253 | 32 | 248 | 5.13e-19 | 85.9 |
MS.gene97602.t1 | MTR_8g068760 | 40.000 | 100 | 58 | 2 | 268 | 366 | 135 | 233 | 1.55e-16 | 78.6 |
MS.gene97602.t1 | MTR_8g068580 | 44.086 | 93 | 48 | 4 | 276 | 366 | 43 | 133 | 2.56e-13 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97602.t1 | AT5G54160 | 48.000 | 350 | 175 | 5 | 20 | 366 | 16 | 361 | 6.41e-110 | 326 |
MS.gene97602.t1 | AT1G77520 | 40.000 | 355 | 198 | 9 | 24 | 366 | 30 | 381 | 7.46e-83 | 257 |
MS.gene97602.t1 | AT1G51990 | 37.681 | 345 | 206 | 3 | 20 | 357 | 12 | 354 | 9.68e-82 | 254 |
MS.gene97602.t1 | AT1G33030 | 41.040 | 346 | 193 | 8 | 27 | 366 | 10 | 350 | 2.52e-81 | 252 |
MS.gene97602.t1 | AT1G51990 | 37.391 | 345 | 207 | 3 | 20 | 357 | 12 | 354 | 1.01e-80 | 251 |
MS.gene97602.t1 | AT1G63140 | 40.884 | 362 | 193 | 13 | 20 | 366 | 26 | 381 | 2.02e-73 | 233 |
MS.gene97602.t1 | AT1G21100 | 40.395 | 354 | 194 | 7 | 16 | 356 | 15 | 364 | 2.35e-73 | 233 |
MS.gene97602.t1 | AT1G63140 | 40.884 | 362 | 193 | 13 | 20 | 366 | 46 | 401 | 3.21e-73 | 233 |
MS.gene97602.t1 | AT1G21130 | 40.169 | 356 | 196 | 7 | 14 | 356 | 13 | 364 | 2.47e-72 | 230 |
MS.gene97602.t1 | AT1G21110 | 40.113 | 354 | 195 | 7 | 16 | 356 | 15 | 364 | 1.96e-70 | 225 |
MS.gene97602.t1 | AT1G21120 | 39.548 | 354 | 197 | 7 | 16 | 356 | 15 | 364 | 3.20e-69 | 222 |
MS.gene97602.t1 | AT5G53810 | 38.304 | 342 | 197 | 7 | 37 | 366 | 39 | 378 | 4.70e-69 | 221 |
MS.gene97602.t1 | AT1G21120 | 39.548 | 354 | 197 | 7 | 16 | 356 | 63 | 412 | 1.22e-68 | 222 |
MS.gene97602.t1 | AT1G77530 | 38.310 | 355 | 204 | 9 | 24 | 366 | 30 | 381 | 2.75e-68 | 219 |
MS.gene97602.t1 | AT1G76790 | 39.730 | 370 | 193 | 11 | 17 | 366 | 6 | 365 | 4.82e-67 | 216 |
MS.gene97602.t1 | AT3G53140 | 35.328 | 351 | 200 | 9 | 12 | 346 | 1 | 340 | 1.10e-59 | 197 |
MS.gene97602.t1 | AT1G62900 | 46.305 | 203 | 106 | 3 | 166 | 366 | 4 | 205 | 1.46e-57 | 186 |
MS.gene97602.t1 | AT1G33030 | 40.400 | 250 | 140 | 6 | 27 | 271 | 10 | 255 | 1.60e-53 | 178 |
MS.gene97602.t1 | AT1G33030 | 40.486 | 247 | 138 | 6 | 27 | 268 | 10 | 252 | 2.47e-52 | 174 |
MS.gene97602.t1 | AT5G37170 | 34.375 | 320 | 167 | 9 | 56 | 366 | 49 | 334 | 8.08e-52 | 176 |
MS.gene97602.t1 | AT5G37170 | 41.919 | 198 | 111 | 4 | 172 | 366 | 38 | 234 | 6.55e-50 | 167 |
MS.gene97602.t1 | AT5G37170 | 42.246 | 187 | 104 | 4 | 183 | 366 | 1 | 186 | 4.40e-47 | 159 |
MS.gene97602.t1 | AT1G21130 | 40.226 | 266 | 144 | 5 | 14 | 268 | 13 | 274 | 4.71e-45 | 157 |
MS.gene97602.t1 | AT1G63140 | 39.695 | 262 | 140 | 10 | 20 | 268 | 46 | 302 | 1.09e-42 | 151 |
MS.gene97602.t1 | AT4G35160 | 31.003 | 329 | 207 | 9 | 38 | 351 | 44 | 367 | 5.94e-37 | 137 |
MS.gene97602.t1 | AT4G35150 | 32.787 | 244 | 146 | 6 | 125 | 351 | 68 | 310 | 1.40e-36 | 135 |
MS.gene97602.t1 | AT1G77530 | 36.441 | 236 | 138 | 6 | 24 | 249 | 30 | 263 | 3.55e-33 | 125 |
MS.gene97602.t1 | AT1G63140 | 37.975 | 237 | 129 | 10 | 20 | 243 | 46 | 277 | 1.22e-31 | 121 |
Find 67 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTCTGCTTTCTCTATTAT+TGG | 0.128556 | 7.4:+87389020 | MS.gene97602:CDS |
TAAATATAGGATTAACTTTA+AGG | 0.132063 | 7.4:+87388124 | MS.gene97602:intron |
TCATTGATTTGTTGAATAAT+TGG | 0.195679 | 7.4:-87388235 | None:intergenic |
CGAGATGCATTTGTTGCTTC+TGG | 0.211592 | 7.4:-87388882 | None:intergenic |
CACAAAGCTTTGCCTCAAAA+TGG | 0.243448 | 7.4:+87388822 | MS.gene97602:CDS |
TGCAAAATATCCATCAATTA+AGG | 0.257882 | 7.4:+87388373 | MS.gene97602:CDS |
GAGAGTTTGGCTCAACGTTC+TGG | 0.290728 | 7.4:+87388975 | MS.gene97602:CDS |
CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.4:+87385162 | MS.gene97602:CDS |
ATGTGTCATCCTGCTTTGAT+AGG | 0.301521 | 7.4:+87385423 | MS.gene97602:CDS |
AAGTTGATTGCCTTAATTGA+TGG | 0.303709 | 7.4:-87388383 | None:intergenic |
ACACTCTCAGCTATGGTATT+AGG | 0.313041 | 7.4:+87385096 | MS.gene97602:CDS |
GGTAGCATAATGAGTGTTTA+TGG | 0.313050 | 7.4:+87385324 | MS.gene97602:CDS |
CATATCCTTTGTATATTTCA+AGG | 0.318611 | 7.4:-87388289 | None:intergenic |
TCTTGTGGCACATGTACTAT+TGG | 0.327244 | 7.4:+87388854 | MS.gene97602:CDS |
TGCAAAAGAATATGAGAGTT+TGG | 0.338232 | 7.4:+87388962 | MS.gene97602:CDS |
TAACCCAACCTTAAGCATTA+TGG | 0.341590 | 7.4:-87388616 | None:intergenic |
AACTGCAGGAAACACTAAAT+TGG | 0.344342 | 7.4:-87385121 | None:intergenic |
TCTAGGCTGTATGTCATAAT+TGG | 0.370560 | 7.4:+87388763 | MS.gene97602:intron |
AACATACGATCTAGCCGATT+TGG | 0.374943 | 7.4:-87385246 | None:intergenic |
AATAGTGATCATGGTTATCT+TGG | 0.384090 | 7.4:+87385384 | MS.gene97602:CDS |
GTTGATGTTGGAGGTGGAAA+TGG | 0.399088 | 7.4:+87388329 | MS.gene97602:CDS |
GTCTCAAGTTTGGTTGATGT+TGG | 0.402367 | 7.4:+87388317 | MS.gene97602:CDS |
AACACTCTGATTTGCCAAAT+CGG | 0.406765 | 7.4:+87385232 | MS.gene97602:CDS |
AAAGAACAATATACCTGGAA+TGG | 0.419990 | 7.4:-87388438 | None:intergenic |
GTTTATGGGATCACACCTTC+TGG | 0.427376 | 7.4:+87385339 | MS.gene97602:CDS |
GAAAATGCACCACCCATTCC+AGG | 0.430355 | 7.4:+87388425 | MS.gene97602:CDS |
TATCACTATCATCTATTTGT+GGG | 0.435409 | 7.4:-87385074 | None:intergenic |
TGAAATATACAAAGGATATG+AGG | 0.436772 | 7.4:+87388292 | MS.gene97602:CDS |
CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.4:+87385289 | MS.gene97602:CDS |
AGGAGATGCCATAATGCTTA+AGG | 0.462667 | 7.4:+87388608 | MS.gene97602:CDS |
GTAGCATAATGAGTGTTTAT+GGG | 0.463088 | 7.4:+87385325 | MS.gene97602:CDS |
CATTATGCTACCATCATCAT+TGG | 0.464708 | 7.4:-87385313 | None:intergenic |
ATATGAGGGAGTCTCAAGTT+TGG | 0.471735 | 7.4:+87388307 | MS.gene97602:CDS |
GTATCACTATCATCTATTTG+TGG | 0.490917 | 7.4:-87385075 | None:intergenic |
TAAGGATGCAGTACTTGATC+CGG | 0.492794 | 7.4:+87388142 | MS.gene97602:CDS |
GGCAAATCAGAGTGTTGAGT+TGG | 0.494514 | 7.4:-87385225 | None:intergenic |
TATGATGAAAATAGTGATCA+TGG | 0.500039 | 7.4:+87385375 | MS.gene97602:CDS |
TTGAATAATTGGTTTACTTG+AGG | 0.500718 | 7.4:-87388224 | None:intergenic |
AAGAACAATATACCTGGAAT+GGG | 0.505289 | 7.4:-87388437 | None:intergenic |
TTTCTCTATTATTGGAGTGA+TGG | 0.505610 | 7.4:+87389028 | MS.gene97602:CDS |
AATATCTAAGTACGAGTACA+TGG | 0.507809 | 7.4:+87388193 | MS.gene97602:CDS |
TCAAGTTTGGTTGATGTTGG+AGG | 0.510442 | 7.4:+87388320 | MS.gene97602:CDS |
TGTGTCATCCTGCTTTGATA+GGG | 0.514622 | 7.4:+87385424 | MS.gene97602:CDS |
TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.4:+87385168 | MS.gene97602:CDS |
ATCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.4:+87385430 | MS.gene97602:CDS |
CATTTAGGGATTGAGCATGT+TGG | 0.530865 | 7.4:+87388558 | MS.gene97602:intron |
ATTGCAGCATTAAGAACTGC+AGG | 0.535869 | 7.4:-87385135 | None:intergenic |
ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.4:+87388927 | MS.gene97602:CDS |
AGCATTATGGCATCTCCTTG+TGG | 0.554368 | 7.4:-87388603 | None:intergenic |
AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.4:+87388924 | MS.gene97602:CDS |
AGTTTGGTTGATGTTGGAGG+TGG | 0.559529 | 7.4:+87388323 | MS.gene97602:CDS |
GAAATATACAAAGGATATGA+GGG | 0.561483 | 7.4:+87388293 | MS.gene97602:CDS |
GGCTGTATGTCATAATTGGT+CGG | 0.563483 | 7.4:+87388767 | MS.gene97602:intron |
TTAGGGATTGAGCATGTTGG+AGG | 0.570708 | 7.4:+87388561 | MS.gene97602:intron |
TACCACAACCCTATCAAAGC+AGG | 0.575416 | 7.4:-87385432 | None:intergenic |
TAGTGATACACTCTCAGCTA+TGG | 0.578762 | 7.4:+87385089 | MS.gene97602:CDS |
AACAATATACCTGGAATGGG+TGG | 0.581952 | 7.4:-87388434 | None:intergenic |
TCTACTCGGACCAATGATGA+TGG | 0.584557 | 7.4:+87385303 | MS.gene97602:CDS |
ATCACTATCATCTATTTGTG+GGG | 0.595648 | 7.4:-87385073 | None:intergenic |
AAATGGAAAGGTCATTCTTG+TGG | 0.596549 | 7.4:+87388839 | MS.gene97602:CDS |
TAAGTACGAGTACATGGGAA+AGG | 0.606162 | 7.4:+87388199 | MS.gene97602:CDS |
AGCTTTGCCTCAAAATGGAA+AGG | 0.610192 | 7.4:+87388827 | MS.gene97602:CDS |
GGATGCAGTACTTGATCCGG+AGG | 0.613278 | 7.4:+87388145 | MS.gene97602:CDS |
AGAATCCTTGAAATATACAA+AGG | 0.621043 | 7.4:+87388284 | MS.gene97602:CDS |
ATATCTAAGTACGAGTACAT+GGG | 0.670164 | 7.4:+87388194 | MS.gene97602:CDS |
GGGTGTGAGATTCAATCACA+TGG | 0.675697 | 7.4:-87385053 | None:intergenic |
ATGTTTGAAAACATTCCACA+AGG | 0.693962 | 7.4:+87388588 | MS.gene97602:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTTTTTTTTTAAATT+GGG | + | chr7.4:87387978-87387997 | MS.gene97602:intron | 0.0% |
!!! | TATTTTTTTTTTTTTTAAAT+TGG | + | chr7.4:87387977-87387996 | MS.gene97602:intron | 0.0% |
!! | AAAATTGTAAAATTTCATTT+AGG | + | chr7.4:87388543-87388562 | MS.gene97602:intron | 10.0% |
!! | AAATTGTAAAATTTCATTTA+GGG | + | chr7.4:87388544-87388563 | MS.gene97602:intron | 10.0% |
!! | ATAGAAACTATTAAATTTAA+AGG | + | chr7.4:87387417-87387436 | MS.gene97602:intron | 10.0% |
!! | TAAAAAAAAATACTTGATTA+TGG | + | chr7.4:87387941-87387960 | MS.gene97602:intron | 10.0% |
!!! | AAAATTTTAATTATTAAGCA+AGG | - | chr7.4:87385468-87385487 | None:intergenic | 10.0% |
!!! | AATGCTAAAATAATATTTTA+AGG | - | chr7.4:87386651-87386670 | None:intergenic | 10.0% |
!!! | ATTTGTTAATTTATTTTAAG+AGG | + | chr7.4:87386753-87386772 | MS.gene97602:intron | 10.0% |
!! | AGTTTAAATAATTATTGAAG+TGG | - | chr7.4:87388504-87388523 | None:intergenic | 15.0% |
!! | ATCAGTTATATGATAAATAT+AGG | + | chr7.4:87388111-87388130 | MS.gene97602:intron | 15.0% |
!! | GACTTATTCAAAAAAATTAA+TGG | + | chr7.4:87388170-87388189 | MS.gene97602:CDS | 15.0% |
!! | TAAATATAGGATTAACTTTA+AGG | + | chr7.4:87388124-87388143 | MS.gene97602:intron | 15.0% |
!! | TATAAAAAAATAAGTAGTCT+TGG | + | chr7.4:87387647-87387666 | MS.gene97602:intron | 15.0% |
!! | TATACAATAAATATACATTG+AGG | - | chr7.4:87388081-87388100 | None:intergenic | 15.0% |
!!! | AAAATTTTCCATTTATATGT+AGG | + | chr7.4:87385480-87385499 | MS.gene97602:intron | 15.0% |
!!! | ATAGGTCTTTTAAATTTTTA+AGG | - | chr7.4:87387312-87387331 | None:intergenic | 15.0% |
!!! | TAATTAAATTTGTTGTTTGT+TGG | + | chr7.4:87387882-87387901 | MS.gene97602:intron | 15.0% |
!!! | TGTTATTTGTTAATTGTTAT+CGG | + | chr7.4:87387496-87387515 | MS.gene97602:intron | 15.0% |
!!! | TTTCTTTAAGAAAAACATAA+TGG | - | chr7.4:87385524-87385543 | None:intergenic | 15.0% |
!! | AACTATTAAATTTAAAGGCA+CGG | + | chr7.4:87387422-87387441 | MS.gene97602:intron | 20.0% |
!! | AAGAAGAAGGAAAAAAAAAT+GGG | + | chr7.4:87386241-87386260 | MS.gene97602:intron | 20.0% |
!! | AATACATATAATGGCTTATT+TGG | + | chr7.4:87385603-87385622 | MS.gene97602:intron | 20.0% |
!! | AATAGTGAGAGTTATTTATA+GGG | + | chr7.4:87386918-87386937 | MS.gene97602:intron | 20.0% |
!! | AATTAGGATTTGTATTCTAT+CGG | - | chr7.4:87385789-87385808 | None:intergenic | 20.0% |
!! | ACTTATTTAATTAGGATAGA+AGG | + | chr7.4:87386156-87386175 | MS.gene97602:intron | 20.0% |
!! | AGTTAATTATATCTTAATCG+TGG | - | chr7.4:87388006-87388025 | None:intergenic | 20.0% |
!! | ATACATATAATGGCTTATTT+GGG | + | chr7.4:87385604-87385623 | MS.gene97602:intron | 20.0% |
!! | CTAATTCAATATGAATTACA+AGG | - | chr7.4:87386873-87386892 | None:intergenic | 20.0% |
!! | GTGAAATCACTTATTTAATT+AGG | + | chr7.4:87386148-87386167 | MS.gene97602:intron | 20.0% |
!! | TAACAAAAATATTTACCAGA+AGG | - | chr7.4:87385357-87385376 | None:intergenic | 20.0% |
!! | TTCTTTACAAGAATATAGTT+TGG | + | chr7.4:87386671-87386690 | MS.gene97602:intron | 20.0% |
!!! | AGGTATATTGTTCTTTAAAA+TGG | + | chr7.4:87388445-87388464 | MS.gene97602:intron | 20.0% |
!!! | ATTTTAAAGAACAATATACC+TGG | - | chr7.4:87388446-87388465 | None:intergenic | 20.0% |
!!! | TCATTGATTTGTTGAATAAT+TGG | - | chr7.4:87388238-87388257 | None:intergenic | 20.0% |
! | AAGAAACTATCACAAAAGAT+AGG | + | chr7.4:87386782-87386801 | MS.gene97602:intron | 25.0% |
! | AATATCATGTTCATTAATGC+TGG | + | chr7.4:87388924-87388943 | MS.gene97602:CDS | 25.0% |
! | AGAATCCTTGAAATATACAA+AGG | + | chr7.4:87388284-87388303 | MS.gene97602:CDS | 25.0% |
! | AGTATATGTAGATTGATCAT+GGG | + | chr7.4:87386312-87386331 | MS.gene97602:intron | 25.0% |
! | CAATAGTGAGAGTTATTTAT+AGG | + | chr7.4:87386917-87386936 | MS.gene97602:intron | 25.0% |
! | CATATCCTTTGTATATTTCA+AGG | - | chr7.4:87388292-87388311 | None:intergenic | 25.0% |
! | CTAATTCGCTAAAAACAAAA+AGG | + | chr7.4:87385803-87385822 | MS.gene97602:intron | 25.0% |
! | GAAACAAACATGAAACTTAA+AGG | - | chr7.4:87387023-87387042 | None:intergenic | 25.0% |
! | GAAATATACAAAGGATATGA+GGG | + | chr7.4:87388293-87388312 | MS.gene97602:CDS | 25.0% |
! | GAAGAAGAAGGAAAAAAAAA+TGG | + | chr7.4:87386240-87386259 | MS.gene97602:intron | 25.0% |
! | GTCATATTAGTCATATTTGT+AGG | - | chr7.4:87385891-87385910 | None:intergenic | 25.0% |
! | TAGTCATTCCTACATATAAA+TGG | - | chr7.4:87385491-87385510 | None:intergenic | 25.0% |
! | TATCACTATCATCTATTTGT+GGG | - | chr7.4:87385077-87385096 | None:intergenic | 25.0% |
! | TATGATGAAAATAGTGATCA+TGG | + | chr7.4:87385375-87385394 | MS.gene97602:CDS | 25.0% |
! | TGAAATATACAAAGGATATG+AGG | + | chr7.4:87388292-87388311 | MS.gene97602:CDS | 25.0% |
! | TGCAAAATATCCATCAATTA+AGG | + | chr7.4:87388373-87388392 | MS.gene97602:CDS | 25.0% |
! | TTTATATGTAGGAATGACTA+CGG | + | chr7.4:87385491-87385510 | MS.gene97602:intron | 25.0% |
!! | ATAGATCAACTTTAGCTTAA+CGG | - | chr7.4:87387189-87387208 | None:intergenic | 25.0% |
!! | CATATTTCTTTTCGACTTTA+AGG | - | chr7.4:87386414-87386433 | None:intergenic | 25.0% |
!! | GATTCTTTTCATGTGAATTT+TGG | - | chr7.4:87388270-87388289 | None:intergenic | 25.0% |
!! | TAAAGGCCAAATACATTTTT+GGG | - | chr7.4:87387361-87387380 | None:intergenic | 25.0% |
!! | TTGAATAATTGGTTTACTTG+AGG | - | chr7.4:87388227-87388246 | None:intergenic | 25.0% |
!!! | AACAACTTTTTGAAAAACAC+TGG | + | chr7.4:87385568-87385587 | MS.gene97602:intron | 25.0% |
!!! | AAGTTTCTAAAGTTTCAGAT+AGG | + | chr7.4:87387056-87387075 | MS.gene97602:intron | 25.0% |
!!! | ATCATTATTTTGACAAGTCT+TGG | - | chr7.4:87386579-87386598 | None:intergenic | 25.0% |
!!! | CTTTTTGTTTTTAGCGAATT+AGG | - | chr7.4:87385805-87385824 | None:intergenic | 25.0% |
!!! | GAAATCGCTTTTATTTTTTG+TGG | + | chr7.4:87385632-87385651 | MS.gene97602:intron | 25.0% |
!!! | GCTGTTTTATGTTATTAACA+TGG | - | chr7.4:87385856-87385875 | None:intergenic | 25.0% |
!!! | GTTTCGTTTCTTTTTTTTTG+TGG | + | chr7.4:87387745-87387764 | MS.gene97602:intron | 25.0% |
!!! | TTTAAGTTTCGAGTTTGTTT+CGG | + | chr7.4:87387082-87387101 | MS.gene97602:intron | 25.0% |
!!! | TTTAAGTTTCGAGTTTGTTT+CGG | - | chr7.4:87387101-87387082 | None:intergenic | 25.0% |
!!! | TTTTTTGTGAAATTTTCCGA+TGG | + | chr7.4:87387715-87387734 | MS.gene97602:intron | 25.0% |
AAAGAACAATATACCTGGAA+TGG | - | chr7.4:87388441-87388460 | None:intergenic | 30.0% | |
AAAGGACCCAAAAATGTATT+TGG | + | chr7.4:87387352-87387371 | MS.gene97602:intron | 30.0% | |
AAGAACAATATACCTGGAAT+GGG | - | chr7.4:87388440-87388459 | None:intergenic | 30.0% | |
AATAGTGATCATGGTTATCT+TGG | + | chr7.4:87385384-87385403 | MS.gene97602:CDS | 30.0% | |
AATATCTAAGTACGAGTACA+TGG | + | chr7.4:87388193-87388212 | MS.gene97602:CDS | 30.0% | |
ATATCTAAGTACGAGTACAT+GGG | + | chr7.4:87388194-87388213 | MS.gene97602:CDS | 30.0% | |
ATCACTATCATCTATTTGTG+GGG | - | chr7.4:87385076-87385095 | None:intergenic | 30.0% | |
ATGAAGTTCATATGAGAAGT+AGG | + | chr7.4:87386820-87386839 | MS.gene97602:intron | 30.0% | |
ATGTTTGAAAACATTCCACA+AGG | + | chr7.4:87388588-87388607 | MS.gene97602:CDS | 30.0% | |
ATTTGGTCAGATGTAAACTA+TGG | - | chr7.4:87386988-87387007 | None:intergenic | 30.0% | |
CAATACCAAGTCAAAATTCT+TGG | + | chr7.4:87387619-87387638 | MS.gene97602:intron | 30.0% | |
CATAATATATGCAATGTCCA+GGG | - | chr7.4:87385673-87385692 | None:intergenic | 30.0% | |
CATAGTTAGTTCAGATGTAA+AGG | - | chr7.4:87387378-87387397 | None:intergenic | 30.0% | |
CTGAAACCTTAGAAACTTAA+AGG | + | chr7.4:87387243-87387262 | MS.gene97602:intron | 30.0% | |
GAAACAAACGTGAAACTTAA+AGG | + | chr7.4:87387334-87387353 | MS.gene97602:intron | 30.0% | |
GAAACAAACTCGAAACTTAA+AGG | + | chr7.4:87387274-87387293 | MS.gene97602:intron | 30.0% | |
GAAACAAACTCGAAACTTAA+AGG | - | chr7.4:87387293-87387274 | None:intergenic | 30.0% | |
GAAACAAACTTGACACTTAA+AGG | - | chr7.4:87387143-87387162 | None:intergenic | 30.0% | |
GAGTATATGTAGATTGATCA+TGG | + | chr7.4:87386311-87386330 | MS.gene97602:intron | 30.0% | |
GTAGCATAATGAGTGTTTAT+GGG | + | chr7.4:87385325-87385344 | MS.gene97602:CDS | 30.0% | |
GTATATGTAGATTGATCATG+GGG | + | chr7.4:87386313-87386332 | MS.gene97602:intron | 30.0% | |
GTATCACTATCATCTATTTG+TGG | - | chr7.4:87385078-87385097 | None:intergenic | 30.0% | |
TATGACTATATTCAAGTCTC+CGG | + | chr7.4:87385905-87385924 | MS.gene97602:intron | 30.0% | |
TATTCTTGTACTCTTGTGAT+AGG | - | chr7.4:87387454-87387473 | None:intergenic | 30.0% | |
TGCAAAAGAATATGAGAGTT+TGG | + | chr7.4:87388962-87388981 | MS.gene97602:CDS | 30.0% | |
TTCTTGATGTAGTTCCAAAT+TGG | + | chr7.4:87387575-87387594 | MS.gene97602:intron | 30.0% | |
TTGGAAATCAAGGATGATAA+TGG | + | chr7.4:87387901-87387920 | MS.gene97602:intron | 30.0% | |
TTTCTCTATTATTGGAGTGA+TGG | + | chr7.4:87389028-87389047 | MS.gene97602:CDS | 30.0% | |
! | AAAAAGTCTTTATGATGACG+CGG | - | chr7.4:87387700-87387719 | None:intergenic | 30.0% |
! | AAGTTGATTGCCTTAATTGA+TGG | - | chr7.4:87388386-87388405 | None:intergenic | 30.0% |
! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr7.4:87387252-87387271 | None:intergenic | 30.0% |
! | CTCAACTTGTTTGAAATCAT+TGG | + | chr7.4:87385162-87385181 | MS.gene97602:CDS | 30.0% |
! | GTAAACTATGGTTAGTTGTT+TGG | - | chr7.4:87386976-87386995 | None:intergenic | 30.0% |
! | GTAAAGGCCAAATACATTTT+TGG | - | chr7.4:87387362-87387381 | None:intergenic | 30.0% |
! | TTGTTTGAAATCATTGGTGA+TGG | + | chr7.4:87385168-87385187 | MS.gene97602:CDS | 30.0% |
! | TTTTTGAATAAGTCAACCTC+CGG | - | chr7.4:87388164-87388183 | None:intergenic | 30.0% |
!! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr7.4:87387241-87387260 | None:intergenic | 30.0% |
!! | TTGTTGTTTGTTGGAAATCA+AGG | + | chr7.4:87387891-87387910 | MS.gene97602:intron | 30.0% |
!!! | TCCATCTTTTTCAATGTTCT+AGG | + | chr7.4:87388746-87388765 | MS.gene97602:intron | 30.0% |
!!! | TCGTTTCTTTTTTTTTGTGG+TGG | + | chr7.4:87387748-87387767 | MS.gene97602:intron | 30.0% |
!!! | TTTATTTTTTGTGGTGTCCA+AGG | + | chr7.4:87385641-87385660 | MS.gene97602:intron | 30.0% |
AAAAAAAATGGGTGACAGCT+AGG | + | chr7.4:87386252-87386271 | MS.gene97602:intron | 35.0% | |
AAAAAAATGGGTGACAGCTA+GGG | + | chr7.4:87386253-87386272 | MS.gene97602:intron | 35.0% | |
AAACGAAACATGTATGCCAT+CGG | - | chr7.4:87387734-87387753 | None:intergenic | 35.0% | |
AAATAAACACCGCACTAAGA+CGG | + | chr7.4:87386025-87386044 | MS.gene97602:intron | 35.0% | |
AAATGGAAAGGTCATTCTTG+TGG | + | chr7.4:87388839-87388858 | MS.gene97602:CDS | 35.0% | |
AACATGAAACTTAAAGGACC+TGG | - | chr7.4:87387017-87387036 | None:intergenic | 35.0% | |
AACTGCAGGAAACACTAAAT+TGG | - | chr7.4:87385124-87385143 | None:intergenic | 35.0% | |
AAGCCAAACTCGAAACTTAA+AGG | + | chr7.4:87387214-87387233 | MS.gene97602:intron | 35.0% | |
ACATGAAACTTAAAGGACCT+GGG | - | chr7.4:87387016-87387035 | None:intergenic | 35.0% | |
AGAAACGAAACATGTATGTC+CGG | - | chr7.4:87387788-87387807 | None:intergenic | 35.0% | |
ATAGGTCCTTTAAGTGTCTA+AGG | + | chr7.4:87387105-87387124 | MS.gene97602:intron | 35.0% | |
ATCATGTTCATTAATGCTGG+TGG | + | chr7.4:87388927-87388946 | MS.gene97602:CDS | 35.0% | |
ATGCCATAATGCTTAAGGTT+GGG | + | chr7.4:87388613-87388632 | MS.gene97602:intron | 35.0% | |
ATTTGGTCCACTTGTCAAAT+TGG | - | chr7.4:87387537-87387556 | None:intergenic | 35.0% | |
CATTATGCTACCATCATCAT+TGG | - | chr7.4:87385316-87385335 | None:intergenic | 35.0% | |
CCAAAGTCATTGTCATTGAT+CGG | + | chr7.4:87385964-87385983 | MS.gene97602:intron | 35.0% | |
CTGAAACCTTAGACACTTAA+AGG | - | chr7.4:87387114-87387133 | None:intergenic | 35.0% | |
GCATAATATATGCAATGTCC+AGG | - | chr7.4:87385674-87385693 | None:intergenic | 35.0% | |
GCCTAGAACATTGAAAAAGA+TGG | - | chr7.4:87388750-87388769 | None:intergenic | 35.0% | |
GGATAGAAGGAAAAACAACT+CGG | + | chr7.4:87386169-87386188 | MS.gene97602:intron | 35.0% | |
GGTAGCATAATGAGTGTTTA+TGG | + | chr7.4:87385324-87385343 | MS.gene97602:CDS | 35.0% | |
GTTTCACGTTTGTTTCAGAT+AGG | - | chr7.4:87387330-87387349 | None:intergenic | 35.0% | |
TAACCCAACCTTAAGCATTA+TGG | - | chr7.4:87388619-87388638 | None:intergenic | 35.0% | |
TCTAGGCTGTATGTCATAAT+TGG | + | chr7.4:87388763-87388782 | MS.gene97602:intron | 35.0% | |
TGATGTAGTTCCAAATTGGA+CGG | + | chr7.4:87387579-87387598 | MS.gene97602:intron | 35.0% | |
TTTGGTCCACTTGTCAAATT+GGG | - | chr7.4:87387536-87387555 | None:intergenic | 35.0% | |
! | AACACTCTGATTTGCCAAAT+CGG | + | chr7.4:87385232-87385251 | MS.gene97602:CDS | 35.0% |
! | AAGTGTCTAAGGTTTCAGAT+AGG | + | chr7.4:87387116-87387135 | MS.gene97602:intron | 35.0% |
! | AGAATGACCTTTCCATTTTG+AGG | - | chr7.4:87388837-87388856 | None:intergenic | 35.0% |
! | CATTCCCATTGTTTGGAATT+CGG | + | chr7.4:87386713-87386732 | MS.gene97602:intron | 35.0% |
! | CATTTTCAATCACTTGAGGA+AGG | - | chr7.4:87388412-87388431 | None:intergenic | 35.0% |
! | CTATGGTTAGTTGTTTGGTT+AGG | - | chr7.4:87386971-87386990 | None:intergenic | 35.0% |
! | GTGTCAAGTTTGTTTCAGAT+AGG | + | chr7.4:87387147-87387166 | MS.gene97602:intron | 35.0% |
!! | AAGTTTCGAGTTTGGCTTAA+CGG | - | chr7.4:87387212-87387231 | None:intergenic | 35.0% |
!! | CTCTTCTGTCTATTTCTACT+CGG | + | chr7.4:87385289-87385308 | MS.gene97602:CDS | 35.0% |
!!! | ACGTTCCAAGAATTTTGACT+TGG | - | chr7.4:87387627-87387646 | None:intergenic | 35.0% |
!!! | TTCTTTTTTTTTGTGGTGGC+CGG | + | chr7.4:87387752-87387771 | MS.gene97602:intron | 35.0% |
AAACGAAACATGTATGTCCG+GGG | - | chr7.4:87387786-87387805 | None:intergenic | 40.0% | |
AACAATATACCTGGAATGGG+TGG | - | chr7.4:87388437-87388456 | None:intergenic | 40.0% | |
AACATACGATCTAGCCGATT+TGG | - | chr7.4:87385249-87385268 | None:intergenic | 40.0% | |
AATAAACACCGCACTAAGAC+GGG | + | chr7.4:87386026-87386045 | MS.gene97602:intron | 40.0% | |
ACACTCTCAGCTATGGTATT+AGG | + | chr7.4:87385096-87385115 | MS.gene97602:CDS | 40.0% | |
ACCAACTGAGTTAAGATCGT+GGG | + | chr7.4:87385703-87385722 | MS.gene97602:intron | 40.0% | |
AGAAGAGAGATAGGAAGAAG+GGG | + | chr7.4:87386288-87386307 | MS.gene97602:intron | 40.0% | |
AGAAGGAAAAACAACTCGGA+GGG | + | chr7.4:87386173-87386192 | MS.gene97602:intron | 40.0% | |
AGAGAAGAGAGATAGGAAGA+AGG | + | chr7.4:87386286-87386305 | MS.gene97602:intron | 40.0% | |
AGCTTTGCCTCAAAATGGAA+AGG | + | chr7.4:87388827-87388846 | MS.gene97602:CDS | 40.0% | |
AGGAGATGCCATAATGCTTA+AGG | + | chr7.4:87388608-87388627 | MS.gene97602:CDS | 40.0% | |
ATATGAGAAGTAGGCATGAG+AGG | + | chr7.4:87386829-87386848 | MS.gene97602:intron | 40.0% | |
ATATGAGGGAGTCTCAAGTT+TGG | + | chr7.4:87388307-87388326 | MS.gene97602:CDS | 40.0% | |
ATCTTTGTTGCCGTCCAATT+TGG | - | chr7.4:87387592-87387611 | None:intergenic | 40.0% | |
ATGTAGGAATGACTACGGTT+CGG | + | chr7.4:87385496-87385515 | MS.gene97602:intron | 40.0% | |
ATGTGTCATCCTGCTTTGAT+AGG | + | chr7.4:87385423-87385442 | MS.gene97602:CDS | 40.0% | |
ATTGCAGCATTAAGAACTGC+AGG | - | chr7.4:87385138-87385157 | None:intergenic | 40.0% | |
CACAAAGCTTTGCCTCAAAA+TGG | + | chr7.4:87388822-87388841 | MS.gene97602:CDS | 40.0% | |
CATGAAACTTAAAGGACCTG+GGG | - | chr7.4:87387015-87387034 | None:intergenic | 40.0% | |
CATTTAGGGATTGAGCATGT+TGG | + | chr7.4:87388558-87388577 | MS.gene97602:intron | 40.0% | |
CCAAACAATGGGAATGTGAT+AGG | - | chr7.4:87386709-87386728 | None:intergenic | 40.0% | |
CCGATCAATGACAATGACTT+TGG | - | chr7.4:87385967-87385986 | None:intergenic | 40.0% | |
CCTATCACATTCCCATTGTT+TGG | + | chr7.4:87386706-87386725 | MS.gene97602:intron | 40.0% | |
GAAACGAAACATGTATGTCC+GGG | - | chr7.4:87387787-87387806 | None:intergenic | 40.0% | |
GAGAAGAGAGATAGGAAGAA+GGG | + | chr7.4:87386287-87386306 | MS.gene97602:intron | 40.0% | |
GATGCCATAATGCTTAAGGT+TGG | + | chr7.4:87388612-87388631 | MS.gene97602:intron | 40.0% | |
GGCTGTATGTCATAATTGGT+CGG | + | chr7.4:87388767-87388786 | MS.gene97602:intron | 40.0% | |
GTGCGGTGTTTATTTGATTC+AGG | - | chr7.4:87386020-87386039 | None:intergenic | 40.0% | |
TAAGGATGCAGTACTTGATC+CGG | + | chr7.4:87388142-87388161 | MS.gene97602:CDS | 40.0% | |
TAAGTACGAGTACATGGGAA+AGG | + | chr7.4:87388199-87388218 | MS.gene97602:CDS | 40.0% | |
TACCAACTGAGTTAAGATCG+TGG | + | chr7.4:87385702-87385721 | MS.gene97602:intron | 40.0% | |
TAGAAGGAAAAACAACTCGG+AGG | + | chr7.4:87386172-87386191 | MS.gene97602:intron | 40.0% | |
TAGTGATACACTCTCAGCTA+TGG | + | chr7.4:87385089-87385108 | MS.gene97602:CDS | 40.0% | |
TCTTGTGGCACATGTACTAT+TGG | + | chr7.4:87388854-87388873 | MS.gene97602:CDS | 40.0% | |
TGTGTCATCCTGCTTTGATA+GGG | + | chr7.4:87385424-87385443 | MS.gene97602:CDS | 40.0% | |
TTGATCATAAATCACCCCTC+TGG | + | chr7.4:87386214-87386233 | MS.gene97602:intron | 40.0% | |
TTGGTCCACTTGTCAAATTG+GGG | - | chr7.4:87387535-87387554 | None:intergenic | 40.0% | |
TTTGTTCTCACGTCTTTGTG+CGG | - | chr7.4:87386066-87386085 | None:intergenic | 40.0% | |
! | GATCAACTTTAGCTTAACGG+AGG | - | chr7.4:87387186-87387205 | None:intergenic | 40.0% |
! | GGTGCATTTTCAATCACTTG+AGG | - | chr7.4:87388416-87388435 | None:intergenic | 40.0% |
! | GTCTCAAGTTTGGTTGATGT+TGG | + | chr7.4:87388317-87388336 | MS.gene97602:CDS | 40.0% |
! | TCAAGTTTGGTTGATGTTGG+AGG | + | chr7.4:87388320-87388339 | MS.gene97602:CDS | 40.0% |
! | TTTGATTTCCCGTCTTAGTG+CGG | - | chr7.4:87386037-87386056 | None:intergenic | 40.0% |
!! | AACTTGTGTCACTTGTGTCA+AGG | + | chr7.4:87386545-87386564 | MS.gene97602:intron | 40.0% |
!! | CTTAACGGAGGTTGATAGAA+AGG | - | chr7.4:87387174-87387193 | None:intergenic | 40.0% |
!! | GGTCCTTTAAGTTTCGAGTT+TGG | - | chr7.4:87387096-87387077 | None:intergenic | 40.0% |
!! | GTTTCGAGTTTGTTTCGGAT+AGG | + | chr7.4:87387087-87387106 | MS.gene97602:intron | 40.0% |
!! | GTTTCGAGTTTGTTTCGGAT+AGG | - | chr7.4:87387106-87387087 | None:intergenic | 40.0% |
!!! | TCTTTTTTTTTGTGGTGGCC+GGG | + | chr7.4:87387753-87387772 | MS.gene97602:intron | 40.0% |
AGCATTATGGCATCTCCTTG+TGG | - | chr7.4:87388606-87388625 | None:intergenic | 45.0% | |
ATCCTGCTTTGATAGGGTTG+TGG | + | chr7.4:87385430-87385449 | MS.gene97602:CDS | 45.0% | |
GAAGAGAGATAGGAAGAAGG+GGG | + | chr7.4:87386289-87386308 | MS.gene97602:intron | 45.0% | |
GAAGGAAAAACAACTCGGAG+GGG | + | chr7.4:87386174-87386193 | MS.gene97602:intron | 45.0% | |
GAGAAGGAGAGAAGAGAGAT+AGG | + | chr7.4:87386279-87386298 | MS.gene97602:intron | 45.0% | |
GGCATGAGAGGTTGAAACAA+AGG | + | chr7.4:87386841-87386860 | MS.gene97602:intron | 45.0% | |
GGGTGTGAGATTCAATCACA+TGG | - | chr7.4:87385056-87385075 | None:intergenic | 45.0% | |
GTTGATGTTGGAGGTGGAAA+TGG | + | chr7.4:87388329-87388348 | MS.gene97602:CDS | 45.0% | |
GTTTATGGGATCACACCTTC+TGG | + | chr7.4:87385339-87385358 | MS.gene97602:CDS | 45.0% | |
TACCACAACCCTATCAAAGC+AGG | - | chr7.4:87385435-87385454 | None:intergenic | 45.0% | |
TCCACTTGTCAAATTGGGGT+AGG | - | chr7.4:87387531-87387550 | None:intergenic | 45.0% | |
TCCCACGATCTTAACTCAGT+TGG | - | chr7.4:87385707-87385726 | None:intergenic | 45.0% | |
TCCTACCCCAATTTGACAAG+TGG | + | chr7.4:87387527-87387546 | MS.gene97602:intron | 45.0% | |
TCCTTCTTCTTCTTGCCAGA+GGG | - | chr7.4:87386232-87386251 | None:intergenic | 45.0% | |
TCTACTCGGACCAATGATGA+TGG | + | chr7.4:87385303-87385322 | MS.gene97602:CDS | 45.0% | |
TGTCGTCAACGTTGTAGATC+CGG | - | chr7.4:87385944-87385963 | None:intergenic | 45.0% | |
TTAGGGATTGAGCATGTTGG+AGG | + | chr7.4:87388561-87388580 | MS.gene97602:intron | 45.0% | |
TTCCTTCTTCTTCTTGCCAG+AGG | - | chr7.4:87386233-87386252 | None:intergenic | 45.0% | |
! | AACTCGGAGGGGTGATTTTT+GGG | + | chr7.4:87386185-87386204 | MS.gene97602:intron | 45.0% |
! | AATGTCCAGGGTTCTAACCT+TGG | - | chr7.4:87385661-87385680 | None:intergenic | 45.0% |
! | AGCGCCGAATTCCAAACAAT+GGG | - | chr7.4:87386720-87386739 | None:intergenic | 45.0% |
! | AGTTTGGTTGATGTTGGAGG+TGG | + | chr7.4:87388323-87388342 | MS.gene97602:CDS | 45.0% |
! | CGAGATGCATTTGTTGCTTC+TGG | - | chr7.4:87388885-87388904 | None:intergenic | 45.0% |
! | TAGCGCCGAATTCCAAACAA+TGG | - | chr7.4:87386721-87386740 | None:intergenic | 45.0% |
!! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.4:87385228-87385247 | None:intergenic | 45.0% |
!!! | CTTTTTTTTTGTGGTGGCCG+GGG | + | chr7.4:87387754-87387773 | MS.gene97602:intron | 45.0% |
!! | AAATATTAAAATACATATAA+TGG | + | chr7.4:87385594-87385613 | MS.gene97602:intron | 5.0% |
!!! | TAATTTTCTAATAAATAATT+TGG | - | chr7.4:87387554-87387573 | None:intergenic | 5.0% |
ATCCGGAGACACGAGTATTC+CGG | - | chr7.4:87385927-87385946 | None:intergenic | 50.0% | |
ATCTGACCAAATACCTCCCC+AGG | + | chr7.4:87386996-87387015 | MS.gene97602:intron | 50.0% | |
CCTTCTTCTTCTTGCCAGAG+GGG | - | chr7.4:87386231-87386250 | None:intergenic | 50.0% | |
GAAAATGCACCACCCATTCC+AGG | + | chr7.4:87388425-87388444 | MS.gene97602:CDS | 50.0% | |
GAAACTTAAAGGACCTGGGG+AGG | - | chr7.4:87387012-87387031 | None:intergenic | 50.0% | |
GTGACAGCTAGGGTTTGAGA+AGG | + | chr7.4:87386263-87386282 | MS.gene97602:intron | 50.0% | |
! | CAACTCGGAGGGGTGATTTT+TGG | + | chr7.4:87386184-87386203 | MS.gene97602:intron | 50.0% |
! | GAGAGTTTGGCTCAACGTTC+TGG | + | chr7.4:87388975-87388994 | MS.gene97602:CDS | 50.0% |
!! | AAAGGACCTGGGGAGGTATT+TGG | - | chr7.4:87387005-87387024 | None:intergenic | 50.0% |
CCCCTCTGGCAAGAAGAAGA+AGG | + | chr7.4:87386228-87386247 | MS.gene97602:intron | 55.0% | |
CTCCGGAATACTCGTGTCTC+CGG | + | chr7.4:87385922-87385941 | MS.gene97602:intron | 55.0% | |
GGATGCAGTACTTGATCCGG+AGG | + | chr7.4:87388145-87388164 | MS.gene97602:CDS | 55.0% | |
GGTGTCCAAGGTTAGAACCC+TGG | + | chr7.4:87385653-87385672 | MS.gene97602:intron | 55.0% | |
TATGTCCGGGGTTCAAACCC+CGG | - | chr7.4:87387774-87387793 | None:intergenic | 55.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | + | chr7.4:87387766-87387785 | MS.gene97602:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 87385027 | 87389064 | 87385027 | ID=MS.gene97602 |
chr7.4 | mRNA | 87385027 | 87389064 | 87385027 | ID=MS.gene97602.t1;Parent=MS.gene97602 |
chr7.4 | exon | 87385027 | 87385451 | 87385027 | ID=MS.gene97602.t1.exon1;Parent=MS.gene97602.t1 |
chr7.4 | CDS | 87385027 | 87385451 | 87385027 | ID=cds.MS.gene97602.t1;Parent=MS.gene97602.t1 |
chr7.4 | exon | 87388133 | 87388446 | 87388133 | ID=MS.gene97602.t1.exon2;Parent=MS.gene97602.t1 |
chr7.4 | CDS | 87388133 | 87388446 | 87388133 | ID=cds.MS.gene97602.t1;Parent=MS.gene97602.t1 |
chr7.4 | exon | 87388565 | 87388629 | 87388565 | ID=MS.gene97602.t1.exon3;Parent=MS.gene97602.t1 |
chr7.4 | CDS | 87388565 | 87388629 | 87388565 | ID=cds.MS.gene97602.t1;Parent=MS.gene97602.t1 |
chr7.4 | exon | 87388768 | 87389064 | 87388768 | ID=MS.gene97602.t1.exon4;Parent=MS.gene97602.t1 |
chr7.4 | CDS | 87388768 | 87389064 | 87388768 | ID=cds.MS.gene97602.t1;Parent=MS.gene97602.t1 |
Gene Sequence |
Protein sequence |