Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97826.t1 | XP_013464529.1 | 94.8 | 349 | 17 | 1 | 1 | 349 | 1 | 348 | 2.90E-200 | 707.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97826.t1 | Q9ZV89 | 56.1 | 328 | 126 | 6 | 30 | 347 | 38 | 357 | 6.2e-111 | 402.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97826.t1 | A0A072V935 | 94.8 | 349 | 17 | 1 | 1 | 349 | 1 | 348 | 2.1e-200 | 707.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene97826 | MS.gene039341 | PPI |
MS.gene97826 | MS.gene97825 | PPI |
MS.gene97826 | MS.gene47537 | PPI |
MS.gene97826 | MS.gene043504 | PPI |
MS.gene97826 | MS.gene045508 | PPI |
MS.gene97826 | MS.gene008707 | PPI |
MS.gene97826 | MS.gene39565 | PPI |
MS.gene97826 | MS.gene006674 | PPI |
MS.gene97826 | MS.gene26591 | PPI |
MS.gene97826 | MS.gene031625 | PPI |
MS.gene97826 | MS.gene008708 | PPI |
MS.gene97826 | MS.gene47540 | PPI |
MS.gene97826 | MS.gene39564 | PPI |
MS.gene97826 | MS.gene26592 | PPI |
MS.gene97826 | MS.gene31379 | PPI |
MS.gene97826 | MS.gene73821 | PPI |
MS.gene97826 | MS.gene028817 | PPI |
MS.gene97826 | MS.gene72457 | PPI |
MS.gene97826 | MS.gene54859 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97826.t1 | MTR_2g073500 | 94.842 | 349 | 17 | 1 | 1 | 349 | 1 | 348 | 0.0 | 687 |
MS.gene97826.t1 | MTR_1g111010 | 63.248 | 351 | 116 | 5 | 1 | 347 | 1 | 342 | 3.75e-162 | 457 |
MS.gene97826.t1 | MTR_2g073510 | 52.294 | 327 | 138 | 5 | 28 | 343 | 31 | 350 | 8.13e-123 | 357 |
MS.gene97826.t1 | MTR_3g049330 | 50.760 | 329 | 143 | 6 | 30 | 347 | 31 | 351 | 6.26e-119 | 347 |
MS.gene97826.t1 | MTR_2g015720 | 48.348 | 333 | 152 | 7 | 24 | 346 | 36 | 358 | 2.26e-110 | 326 |
MS.gene97826.t1 | MTR_4g088030 | 46.667 | 360 | 170 | 9 | 1 | 347 | 1 | 351 | 3.00e-110 | 325 |
MS.gene97826.t1 | MTR_3g035830 | 48.193 | 332 | 147 | 8 | 28 | 346 | 29 | 348 | 2.15e-109 | 323 |
MS.gene97826.t1 | MTR_5g034810 | 47.432 | 331 | 153 | 8 | 30 | 349 | 35 | 355 | 5.09e-109 | 322 |
MS.gene97826.t1 | MTR_4g087730 | 49.085 | 328 | 148 | 7 | 30 | 347 | 45 | 363 | 6.21e-108 | 320 |
MS.gene97826.t1 | MTR_3g021060 | 46.988 | 332 | 151 | 8 | 30 | 348 | 46 | 365 | 2.15e-106 | 316 |
MS.gene97826.t1 | MTR_4g079700 | 48.930 | 327 | 147 | 6 | 30 | 346 | 47 | 363 | 7.43e-106 | 315 |
MS.gene97826.t1 | MTR_3g021090 | 47.720 | 329 | 145 | 9 | 28 | 342 | 29 | 344 | 3.82e-104 | 312 |
MS.gene97826.t1 | MTR_2g091175 | 45.897 | 329 | 156 | 8 | 30 | 347 | 50 | 367 | 3.89e-101 | 303 |
MS.gene97826.t1 | MTR_5g071350 | 42.535 | 355 | 161 | 9 | 27 | 347 | 55 | 400 | 4.21e-92 | 281 |
MS.gene97826.t1 | MTR_3g464570 | 40.751 | 346 | 172 | 8 | 27 | 347 | 40 | 377 | 4.06e-89 | 272 |
MS.gene97826.t1 | MTR_1g050448 | 43.373 | 332 | 164 | 8 | 30 | 346 | 53 | 375 | 9.83e-89 | 271 |
MS.gene97826.t1 | MTR_1g112210 | 42.857 | 336 | 165 | 9 | 28 | 346 | 57 | 382 | 6.44e-87 | 267 |
MS.gene97826.t1 | MTR_1g112210 | 42.857 | 336 | 152 | 10 | 28 | 346 | 57 | 369 | 2.44e-85 | 263 |
MS.gene97826.t1 | MTR_7g093450 | 40.058 | 347 | 173 | 10 | 30 | 347 | 248 | 588 | 3.01e-81 | 259 |
MS.gene97826.t1 | MTR_0136s0010 | 40.058 | 347 | 173 | 9 | 30 | 347 | 170 | 510 | 3.20e-81 | 257 |
MS.gene97826.t1 | MTR_4g121560 | 39.481 | 347 | 175 | 13 | 30 | 347 | 114 | 454 | 2.43e-77 | 245 |
MS.gene97826.t1 | MTR_5g059400 | 38.136 | 354 | 179 | 10 | 26 | 347 | 171 | 516 | 3.34e-76 | 244 |
MS.gene97826.t1 | MTR_1g116130 | 38.136 | 354 | 179 | 10 | 26 | 347 | 171 | 516 | 3.34e-76 | 244 |
MS.gene97826.t1 | MTR_7g109550 | 38.889 | 342 | 173 | 12 | 30 | 346 | 137 | 467 | 2.67e-74 | 237 |
MS.gene97826.t1 | MTR_4g126950 | 36.494 | 348 | 186 | 12 | 28 | 347 | 107 | 447 | 3.34e-73 | 234 |
MS.gene97826.t1 | MTR_5g033800 | 35.328 | 351 | 193 | 10 | 26 | 348 | 141 | 485 | 4.84e-73 | 234 |
MS.gene97826.t1 | MTR_3g090120 | 37.845 | 362 | 193 | 11 | 10 | 348 | 109 | 461 | 2.40e-72 | 232 |
MS.gene97826.t1 | MTR_4g016940 | 35.143 | 350 | 190 | 9 | 28 | 346 | 84 | 427 | 1.65e-70 | 226 |
MS.gene97826.t1 | MTR_1g058380 | 37.356 | 348 | 185 | 11 | 28 | 347 | 53 | 395 | 2.04e-69 | 223 |
MS.gene97826.t1 | MTR_8g069790 | 34.659 | 352 | 196 | 10 | 25 | 348 | 173 | 518 | 3.48e-69 | 225 |
MS.gene97826.t1 | MTR_3g464570 | 40.441 | 272 | 135 | 6 | 101 | 347 | 4 | 273 | 7.58e-68 | 214 |
MS.gene97826.t1 | MTR_7g094750 | 36.415 | 357 | 176 | 12 | 30 | 348 | 91 | 434 | 6.19e-67 | 218 |
MS.gene97826.t1 | MTR_3g070900 | 34.463 | 354 | 193 | 10 | 27 | 347 | 103 | 450 | 8.05e-66 | 215 |
MS.gene97826.t1 | MTR_3g071650 | 36.080 | 352 | 182 | 11 | 30 | 347 | 89 | 431 | 4.28e-65 | 212 |
MS.gene97826.t1 | MTR_8g093530 | 35.652 | 345 | 192 | 10 | 25 | 349 | 85 | 419 | 1.09e-63 | 209 |
MS.gene97826.t1 | MTR_8g463790 | 32.493 | 357 | 197 | 10 | 26 | 349 | 67 | 412 | 1.17e-63 | 208 |
MS.gene97826.t1 | MTR_4g014430 | 34.384 | 349 | 191 | 10 | 28 | 346 | 106 | 446 | 2.30e-63 | 208 |
MS.gene97826.t1 | MTR_4g014440 | 31.486 | 397 | 215 | 12 | 1 | 347 | 19 | 408 | 8.48e-63 | 206 |
MS.gene97826.t1 | MTR_2g022560 | 37.143 | 350 | 182 | 11 | 30 | 348 | 97 | 439 | 5.68e-62 | 205 |
MS.gene97826.t1 | MTR_7g068920 | 33.523 | 352 | 193 | 10 | 28 | 346 | 78 | 421 | 1.36e-60 | 200 |
MS.gene97826.t1 | MTR_5g083260 | 35.393 | 356 | 185 | 13 | 27 | 347 | 80 | 425 | 4.01e-60 | 199 |
MS.gene97826.t1 | MTR_7g070060 | 31.921 | 354 | 198 | 9 | 30 | 347 | 64 | 410 | 3.59e-58 | 194 |
MS.gene97826.t1 | MTR_5g082880 | 32.597 | 362 | 199 | 12 | 22 | 347 | 160 | 512 | 1.21e-56 | 192 |
MS.gene97826.t1 | MTR_5g033800 | 34.426 | 244 | 144 | 6 | 26 | 259 | 141 | 378 | 3.17e-48 | 167 |
MS.gene97826.t1 | MTR_7g070060 | 31.081 | 296 | 166 | 7 | 88 | 347 | 15 | 308 | 3.07e-44 | 154 |
MS.gene97826.t1 | MTR_7g094750 | 34.940 | 249 | 130 | 7 | 30 | 259 | 91 | 326 | 2.72e-43 | 152 |
MS.gene97826.t1 | MTR_5g069320 | 34.686 | 271 | 133 | 9 | 82 | 339 | 147 | 386 | 5.83e-39 | 142 |
MS.gene97826.t1 | MTR_7g070060 | 30.802 | 237 | 152 | 5 | 30 | 259 | 64 | 295 | 2.09e-37 | 136 |
MS.gene97826.t1 | MTR_5g035150 | 29.609 | 358 | 206 | 14 | 27 | 346 | 82 | 431 | 2.56e-33 | 128 |
MS.gene97826.t1 | MTR_4g092830 | 26.050 | 357 | 216 | 14 | 30 | 348 | 48 | 394 | 8.00e-33 | 127 |
MS.gene97826.t1 | MTR_8g093870 | 28.367 | 349 | 215 | 11 | 27 | 346 | 130 | 472 | 1.80e-32 | 126 |
MS.gene97826.t1 | MTR_6g061710 | 28.226 | 372 | 198 | 14 | 25 | 346 | 162 | 514 | 4.33e-31 | 123 |
MS.gene97826.t1 | MTR_1g076690 | 28.255 | 361 | 204 | 14 | 25 | 342 | 218 | 566 | 6.03e-29 | 117 |
MS.gene97826.t1 | MTR_5g035090 | 26.912 | 353 | 212 | 12 | 27 | 342 | 80 | 423 | 7.32e-29 | 116 |
MS.gene97826.t1 | MTR_2g016060 | 27.596 | 366 | 213 | 15 | 26 | 348 | 46 | 402 | 5.47e-28 | 113 |
MS.gene97826.t1 | MTR_4g125060 | 27.874 | 348 | 216 | 10 | 28 | 346 | 130 | 471 | 9.32e-28 | 113 |
MS.gene97826.t1 | MTR_4g125060 | 27.874 | 348 | 216 | 10 | 28 | 346 | 198 | 539 | 2.06e-27 | 113 |
MS.gene97826.t1 | MTR_4g125060 | 27.874 | 348 | 216 | 10 | 28 | 346 | 169 | 510 | 2.48e-27 | 112 |
MS.gene97826.t1 | MTR_3g109840 | 28.492 | 358 | 192 | 16 | 30 | 342 | 73 | 411 | 2.86e-27 | 111 |
MS.gene97826.t1 | MTR_5g035080 | 26.776 | 366 | 205 | 15 | 27 | 346 | 72 | 420 | 4.12e-27 | 111 |
MS.gene97826.t1 | MTR_6g016240 | 26.404 | 356 | 213 | 14 | 30 | 346 | 71 | 416 | 4.33e-27 | 110 |
MS.gene97826.t1 | MTR_6g016880 | 28.099 | 363 | 210 | 13 | 22 | 346 | 70 | 419 | 2.18e-26 | 109 |
MS.gene97826.t1 | MTR_6g007777 | 25.348 | 359 | 223 | 12 | 23 | 346 | 109 | 457 | 2.76e-26 | 109 |
MS.gene97826.t1 | MTR_8g104970 | 27.147 | 361 | 202 | 14 | 27 | 342 | 117 | 461 | 4.53e-26 | 108 |
MS.gene97826.t1 | MTR_7g033230 | 27.548 | 363 | 208 | 12 | 26 | 346 | 260 | 609 | 2.21e-25 | 107 |
MS.gene97826.t1 | MTR_7g033230 | 27.869 | 366 | 203 | 13 | 26 | 346 | 330 | 679 | 4.20e-25 | 106 |
MS.gene97826.t1 | MTR_5g035070 | 28.451 | 355 | 208 | 14 | 30 | 346 | 87 | 433 | 6.70e-25 | 105 |
MS.gene97826.t1 | MTR_7g019120 | 26.462 | 359 | 221 | 10 | 22 | 346 | 71 | 420 | 1.57e-24 | 103 |
MS.gene97826.t1 | MTR_3g021150 | 44.444 | 108 | 45 | 3 | 222 | 316 | 1 | 106 | 1.05e-23 | 94.7 |
MS.gene97826.t1 | MTR_8g027900 | 25.627 | 359 | 219 | 12 | 28 | 348 | 209 | 557 | 1.28e-23 | 102 |
MS.gene97826.t1 | MTR_6g016875 | 25.852 | 352 | 219 | 12 | 30 | 346 | 64 | 408 | 1.68e-23 | 100 |
MS.gene97826.t1 | MTR_8g099300 | 24.309 | 362 | 227 | 10 | 24 | 347 | 68 | 420 | 1.26e-21 | 95.5 |
MS.gene97826.t1 | MTR_5g035120 | 40.816 | 98 | 52 | 2 | 27 | 124 | 72 | 163 | 8.37e-18 | 80.5 |
MS.gene97826.t1 | MTR_7g019140 | 36.893 | 103 | 59 | 1 | 22 | 124 | 71 | 167 | 5.04e-16 | 75.5 |
MS.gene97826.t1 | MTR_2g022580 | 32.500 | 120 | 67 | 4 | 96 | 202 | 2 | 120 | 6.75e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97826.t1 | AT1G78710 | 55.927 | 329 | 127 | 6 | 30 | 348 | 38 | 358 | 5.22e-135 | 389 |
MS.gene97826.t1 | AT2G30900 | 50.000 | 340 | 148 | 8 | 22 | 348 | 37 | 367 | 1.87e-116 | 342 |
MS.gene97826.t1 | AT1G29050 | 49.394 | 330 | 142 | 9 | 30 | 346 | 61 | 378 | 2.33e-111 | 329 |
MS.gene97826.t1 | AT3G14850 | 49.851 | 335 | 144 | 8 | 28 | 348 | 32 | 356 | 1.06e-108 | 322 |
MS.gene97826.t1 | AT2G42570 | 48.338 | 331 | 148 | 8 | 30 | 348 | 47 | 366 | 2.98e-107 | 318 |
MS.gene97826.t1 | AT2G31110 | 47.416 | 329 | 150 | 8 | 30 | 346 | 45 | 362 | 1.00e-104 | 312 |
MS.gene97826.t1 | AT2G34070 | 47.720 | 329 | 150 | 9 | 30 | 346 | 65 | 383 | 1.54e-104 | 312 |
MS.gene97826.t1 | AT1G78710 | 48.758 | 322 | 108 | 8 | 30 | 348 | 31 | 298 | 3.59e-100 | 298 |
MS.gene97826.t1 | AT2G30900 | 54.274 | 234 | 97 | 5 | 22 | 254 | 37 | 261 | 3.16e-85 | 259 |
MS.gene97826.t1 | AT5G58600 | 42.029 | 345 | 164 | 10 | 30 | 347 | 66 | 401 | 2.68e-84 | 261 |
MS.gene97826.t1 | AT3G54260 | 40.179 | 336 | 176 | 8 | 30 | 349 | 51 | 377 | 5.15e-84 | 259 |
MS.gene97826.t1 | AT5G06700 | 39.481 | 347 | 175 | 10 | 30 | 347 | 255 | 595 | 2.93e-81 | 259 |
MS.gene97826.t1 | AT3G14850 | 49.416 | 257 | 112 | 6 | 106 | 348 | 1 | 253 | 9.45e-81 | 247 |
MS.gene97826.t1 | AT2G30010 | 39.496 | 357 | 174 | 10 | 24 | 347 | 50 | 397 | 1.92e-79 | 248 |
MS.gene97826.t1 | AT2G30010 | 39.496 | 357 | 174 | 10 | 24 | 347 | 93 | 440 | 3.81e-79 | 249 |
MS.gene97826.t1 | AT3G12060 | 38.395 | 349 | 180 | 9 | 28 | 347 | 194 | 536 | 5.44e-79 | 252 |
MS.gene97826.t1 | AT3G62390 | 38.192 | 343 | 183 | 9 | 28 | 347 | 136 | 472 | 5.55e-78 | 247 |
MS.gene97826.t1 | AT2G34070 | 47.431 | 253 | 117 | 7 | 106 | 346 | 1 | 249 | 1.48e-76 | 236 |
MS.gene97826.t1 | AT5G49340 | 38.095 | 378 | 182 | 13 | 14 | 347 | 73 | 442 | 1.85e-75 | 240 |
MS.gene97826.t1 | AT2G31110 | 48.444 | 225 | 108 | 4 | 30 | 254 | 45 | 261 | 1.88e-73 | 229 |
MS.gene97826.t1 | AT1G60790 | 37.322 | 351 | 186 | 10 | 28 | 348 | 188 | 534 | 2.78e-72 | 234 |
MS.gene97826.t1 | AT1G48880 | 38.507 | 335 | 182 | 10 | 30 | 348 | 115 | 441 | 2.64e-71 | 229 |
MS.gene97826.t1 | AT5G20590 | 36.232 | 345 | 188 | 11 | 30 | 347 | 141 | 480 | 2.67e-71 | 230 |
MS.gene97826.t1 | AT3G11030 | 37.500 | 352 | 178 | 12 | 30 | 347 | 106 | 449 | 1.19e-65 | 214 |
MS.gene97826.t1 | AT5G01620 | 32.571 | 350 | 199 | 9 | 27 | 346 | 107 | 449 | 1.05e-64 | 212 |
MS.gene97826.t1 | AT5G01620 | 32.571 | 350 | 199 | 9 | 27 | 346 | 107 | 449 | 1.05e-64 | 212 |
MS.gene97826.t1 | AT5G01620 | 32.571 | 350 | 199 | 9 | 27 | 346 | 115 | 457 | 1.59e-64 | 211 |
MS.gene97826.t1 | AT5G01360 | 31.909 | 351 | 201 | 9 | 28 | 346 | 34 | 378 | 3.84e-64 | 208 |
MS.gene97826.t1 | AT3G06080 | 36.364 | 352 | 184 | 12 | 30 | 348 | 103 | 447 | 6.61e-64 | 210 |
MS.gene97826.t1 | AT2G40160 | 34.930 | 355 | 187 | 11 | 30 | 347 | 77 | 424 | 9.10e-64 | 209 |
MS.gene97826.t1 | AT5G01360 | 31.818 | 352 | 200 | 10 | 28 | 346 | 90 | 434 | 1.86e-63 | 208 |
MS.gene97826.t1 | AT2G40160 | 34.571 | 350 | 185 | 10 | 30 | 342 | 77 | 419 | 2.34e-63 | 207 |
MS.gene97826.t1 | AT5G06230 | 35.043 | 351 | 199 | 7 | 25 | 347 | 16 | 365 | 1.05e-62 | 204 |
MS.gene97826.t1 | AT3G55990 | 33.426 | 359 | 197 | 11 | 22 | 347 | 135 | 484 | 1.36e-62 | 207 |
MS.gene97826.t1 | AT2G31110 | 48.077 | 208 | 96 | 5 | 149 | 346 | 9 | 214 | 1.42e-62 | 199 |
MS.gene97826.t1 | AT5G06230 | 35.043 | 351 | 199 | 7 | 25 | 347 | 57 | 406 | 2.56e-62 | 204 |
MS.gene97826.t1 | AT2G40320 | 34.463 | 354 | 191 | 10 | 27 | 347 | 78 | 423 | 3.79e-62 | 204 |
MS.gene97826.t1 | AT5G19160 | 35.028 | 354 | 189 | 11 | 30 | 348 | 99 | 446 | 4.67e-62 | 205 |
MS.gene97826.t1 | AT1G73140 | 33.333 | 354 | 194 | 11 | 26 | 347 | 63 | 406 | 6.66e-61 | 201 |
MS.gene97826.t1 | AT3G11570 | 36.364 | 319 | 176 | 9 | 56 | 347 | 102 | 420 | 7.00e-60 | 199 |
MS.gene97826.t1 | AT5G58600 | 44.206 | 233 | 118 | 7 | 30 | 259 | 66 | 289 | 4.08e-58 | 190 |
MS.gene97826.t1 | AT2G40150 | 32.603 | 365 | 198 | 11 | 22 | 347 | 66 | 421 | 7.27e-58 | 193 |
MS.gene97826.t1 | AT3G62390 | 36.948 | 249 | 141 | 5 | 28 | 266 | 136 | 378 | 5.00e-55 | 186 |
MS.gene97826.t1 | AT2G38320 | 29.577 | 355 | 211 | 9 | 28 | 348 | 57 | 406 | 3.25e-54 | 183 |
MS.gene97826.t1 | AT5G20590 | 34.855 | 241 | 141 | 6 | 30 | 259 | 141 | 376 | 1.55e-48 | 167 |
MS.gene97826.t1 | AT2G38320 | 29.338 | 317 | 190 | 7 | 66 | 348 | 7 | 323 | 1.61e-47 | 164 |
MS.gene97826.t1 | AT2G40160 | 37.759 | 241 | 134 | 6 | 30 | 260 | 77 | 311 | 1.64e-47 | 163 |
MS.gene97826.t1 | AT3G06080 | 37.449 | 243 | 132 | 7 | 30 | 259 | 103 | 338 | 2.81e-45 | 158 |
MS.gene97826.t1 | AT5G19160 | 34.711 | 242 | 140 | 5 | 30 | 259 | 99 | 334 | 3.48e-43 | 153 |
MS.gene97826.t1 | AT5G06230 | 33.468 | 248 | 151 | 4 | 25 | 259 | 57 | 303 | 6.11e-41 | 146 |
MS.gene97826.t1 | AT5G64470 | 28.612 | 353 | 211 | 12 | 29 | 349 | 54 | 397 | 8.27e-39 | 142 |
MS.gene97826.t1 | AT5G64470 | 28.134 | 359 | 211 | 13 | 29 | 349 | 54 | 403 | 1.13e-38 | 142 |
MS.gene97826.t1 | AT1G70230 | 29.429 | 350 | 197 | 14 | 30 | 346 | 79 | 411 | 1.95e-36 | 136 |
MS.gene97826.t1 | AT5G51640 | 28.804 | 368 | 208 | 12 | 26 | 349 | 134 | 491 | 1.96e-32 | 127 |
MS.gene97826.t1 | AT4G25360 | 28.142 | 366 | 214 | 10 | 25 | 349 | 170 | 527 | 9.30e-31 | 122 |
MS.gene97826.t1 | AT4G25360 | 28.142 | 366 | 214 | 10 | 25 | 349 | 170 | 527 | 9.30e-31 | 122 |
MS.gene97826.t1 | AT3G28150 | 26.536 | 358 | 221 | 12 | 24 | 348 | 64 | 412 | 3.86e-30 | 119 |
MS.gene97826.t1 | AT2G14530 | 26.649 | 379 | 209 | 14 | 20 | 346 | 45 | 406 | 3.72e-28 | 114 |
MS.gene97826.t1 | AT5G20680 | 26.816 | 358 | 209 | 15 | 27 | 346 | 115 | 457 | 1.81e-27 | 112 |
MS.gene97826.t1 | AT5G20680 | 26.816 | 358 | 209 | 15 | 27 | 346 | 209 | 551 | 1.93e-27 | 113 |
MS.gene97826.t1 | AT5G20680 | 26.816 | 358 | 209 | 15 | 27 | 346 | 209 | 551 | 1.93e-27 | 113 |
MS.gene97826.t1 | AT5G20680 | 26.816 | 358 | 209 | 15 | 27 | 346 | 209 | 551 | 1.93e-27 | 113 |
MS.gene97826.t1 | AT5G20680 | 26.816 | 358 | 209 | 15 | 27 | 346 | 209 | 551 | 1.93e-27 | 113 |
MS.gene97826.t1 | AT5G64020 | 27.500 | 360 | 210 | 13 | 30 | 346 | 57 | 408 | 1.96e-27 | 111 |
MS.gene97826.t1 | AT5G20680 | 26.816 | 358 | 209 | 15 | 27 | 346 | 191 | 533 | 2.21e-27 | 113 |
MS.gene97826.t1 | AT1G01430 | 26.562 | 384 | 228 | 13 | 7 | 347 | 76 | 448 | 5.78e-27 | 111 |
MS.gene97826.t1 | AT2G37720 | 26.000 | 350 | 216 | 12 | 30 | 346 | 143 | 482 | 5.84e-25 | 105 |
MS.gene97826.t1 | AT4G01080 | 25.323 | 387 | 229 | 12 | 8 | 348 | 60 | 432 | 2.17e-24 | 103 |
MS.gene97826.t1 | AT5G15900 | 28.415 | 366 | 190 | 13 | 30 | 346 | 67 | 409 | 1.15e-23 | 101 |
MS.gene97826.t1 | AT5G64470 | 27.888 | 251 | 155 | 9 | 29 | 262 | 54 | 295 | 1.15e-23 | 99.8 |
MS.gene97826.t1 | AT5G15900 | 28.415 | 366 | 190 | 13 | 30 | 346 | 86 | 428 | 1.32e-23 | 101 |
MS.gene97826.t1 | AT5G64470 | 27.888 | 251 | 155 | 9 | 29 | 262 | 54 | 295 | 1.58e-23 | 99.8 |
MS.gene97826.t1 | AT5G15890 | 25.753 | 365 | 206 | 11 | 27 | 349 | 184 | 525 | 7.41e-23 | 99.8 |
MS.gene97826.t1 | AT3G02440 | 27.966 | 354 | 206 | 14 | 30 | 346 | 127 | 468 | 3.94e-22 | 97.4 |
MS.gene97826.t1 | AT3G02440 | 27.966 | 354 | 206 | 14 | 30 | 346 | 135 | 476 | 4.02e-22 | 97.4 |
MS.gene97826.t1 | AT4G23790 | 25.203 | 369 | 225 | 13 | 21 | 347 | 69 | 428 | 6.83e-19 | 87.8 |
MS.gene97826.t1 | AT4G11090 | 23.955 | 359 | 225 | 14 | 28 | 347 | 77 | 426 | 1.97e-16 | 80.5 |
Find 75 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTAAGGTATAAGTTGAATT+TGG | 0.153086 | 2.4:-22634816 | None:intergenic |
TTGCCACATGTTATTGCTTA+TGG | 0.235427 | 2.4:-22634763 | None:intergenic |
AGTTGGGAATGAATTAATTA+AGG | 0.268562 | 2.4:+22635264 | MS.gene97826:CDS |
AAATGGGTTCTTAGTGGATT+TGG | 0.268839 | 2.4:+22635009 | MS.gene97826:CDS |
AAAGACCATTCTAAGTAAAA+TGG | 0.286061 | 2.4:+22635953 | MS.gene97826:CDS |
AACATTTCATTCCAAGTATC+AGG | 0.294167 | 2.4:-22636101 | None:intergenic |
TTAAGGTATAAGTTGAATTT+GGG | 0.319731 | 2.4:-22634815 | None:intergenic |
TTGCTGGTGTTCCTGATACT+TGG | 0.354133 | 2.4:+22636090 | MS.gene97826:CDS |
TACTAGCTTCAGCATTTCTA+TGG | 0.355586 | 2.4:+22633547 | MS.gene97826:CDS |
CATGAAAATTCTAGTGGAAA+AGG | 0.364151 | 2.4:+22635867 | MS.gene97826:intron |
TGTAGTCACTGGTGTCTTGC+TGG | 0.365563 | 2.4:+22636074 | MS.gene97826:CDS |
TCAAGGGACTGTCCTTTCAT+TGG | 0.367767 | 2.4:+22633672 | MS.gene97826:CDS |
AATTAAGGAGATGGATCATT+TGG | 0.368405 | 2.4:+22635279 | MS.gene97826:CDS |
GGTGGCATTGGTCCTTGATC+TGG | 0.377983 | 2.4:-22635909 | None:intergenic |
TATCATTGGTGGACTCATAC+TGG | 0.389613 | 2.4:+22635124 | MS.gene97826:CDS |
GGTTAAGCACTTGGGCCAAA+TGG | 0.391109 | 2.4:+22635317 | MS.gene97826:CDS |
AAGATTATATCAAGTATAGA+TGG | 0.396541 | 2.4:+22633733 | MS.gene97826:CDS |
AAACAAAACTCTAGTCTTTG+AGG | 0.408777 | 2.4:-22635359 | None:intergenic |
TTTGGTTCATGATAAAGAAA+AGG | 0.409537 | 2.4:+22635027 | MS.gene97826:CDS |
AATGTTGGAATCAACCCATT+TGG | 0.413535 | 2.4:-22635332 | None:intergenic |
TTGGTTCATGATAAAGAAAA+GGG | 0.424325 | 2.4:+22635028 | MS.gene97826:CDS |
ACTCACTGTGTTCTCAATTC+CGG | 0.446901 | 2.4:+22634854 | MS.gene97826:CDS |
TCACTTTGCTAACACAGTTA+AGG | 0.449047 | 2.4:+22636000 | MS.gene97826:CDS |
AGGAAAGAAGATAATGTTTG+TGG | 0.452207 | 2.4:+22634734 | MS.gene97826:CDS |
CAATTAGCTCAGGGAATCAA+TGG | 0.459718 | 2.4:+22635071 | MS.gene97826:CDS |
AGGTTGGACACAATTAGCTC+AGG | 0.471021 | 2.4:+22635061 | MS.gene97826:CDS |
TTAAGATTGGGTTAAGCACT+TGG | 0.473426 | 2.4:+22635308 | MS.gene97826:CDS |
GACTGTCCTTTCATTGGTCA+AGG | 0.477009 | 2.4:+22633678 | MS.gene97826:CDS |
ACCCTCTCTATGATGCTTCA+AGG | 0.478731 | 2.4:+22633655 | MS.gene97826:CDS |
ATGAAAATTCTAGTGGAAAA+GGG | 0.480566 | 2.4:+22635868 | MS.gene97826:intron |
AACAAAACTCTAGTCTTTGA+GGG | 0.481011 | 2.4:-22635358 | None:intergenic |
CCGCGGCCGGTGTAGATAGA+CGG | 0.485120 | 2.4:-22636035 | None:intergenic |
GACATAACTTTCGCCGCGGC+CGG | 0.486529 | 2.4:-22636048 | None:intergenic |
GTGACTACTCTCAAGGCAAC+TGG | 0.487599 | 2.4:+22633601 | MS.gene97826:CDS |
GTTAAGCACTTGGGCCAAAT+GGG | 0.489317 | 2.4:+22635318 | MS.gene97826:CDS |
CTAGTAGCAGAGAACATAGT+TGG | 0.496126 | 2.4:-22633530 | None:intergenic |
TTGTTAACAGGTTTGATGGT+GGG | 0.501332 | 2.4:+22634691 | MS.gene97826:intron |
AGTCTTTGAGGGTTCAATGT+TGG | 0.510727 | 2.4:-22635347 | None:intergenic |
GAATGAATTAATTAAGGAGA+TGG | 0.511939 | 2.4:+22635270 | MS.gene97826:CDS |
CCGTCTATCTACACCGGCCG+CGG | 0.512088 | 2.4:+22636035 | MS.gene97826:CDS |
GGAAAGAAGATAATGTTTGT+GGG | 0.515523 | 2.4:+22634735 | MS.gene97826:CDS |
GGACCAATGCCACCTTATCC+TGG | 0.516333 | 2.4:+22635918 | MS.gene97826:CDS |
CGCGGCCGGTGTAGATAGAC+GGG | 0.535924 | 2.4:-22636034 | None:intergenic |
CCCTCTCTATGATGCTTCAA+GGG | 0.537419 | 2.4:+22633656 | MS.gene97826:CDS |
ACACCAGGATAAGGTGGCAT+TGG | 0.545022 | 2.4:-22635921 | None:intergenic |
ACAGTGTCTACACCAGGATA+AGG | 0.548405 | 2.4:-22635930 | None:intergenic |
AGACAAACTAAACCAGATCA+AGG | 0.552461 | 2.4:+22635897 | MS.gene97826:CDS |
TTTGTTAACAGGTTTGATGG+TGG | 0.560255 | 2.4:+22634690 | MS.gene97826:intron |
CTTTGCTAACACAGTTAAGG+AGG | 0.560315 | 2.4:+22636003 | MS.gene97826:CDS |
GTGATGTCAAGCAATTGTAC+TGG | 0.560712 | 2.4:-22635981 | None:intergenic |
TCACATGGTTGTTGTAGAGA+AGG | 0.563804 | 2.4:-22633582 | None:intergenic |
CCTCTAGTTGTAATCTTCGA+AGG | 0.566353 | 2.4:+22633760 | MS.gene97826:CDS |
ATCATAGAGAGGGTAGGAGA+AGG | 0.576762 | 2.4:-22633646 | None:intergenic |
CCTTCGAAGATTACAACTAG+AGG | 0.583225 | 2.4:-22633760 | None:intergenic |
TAAGATTGGGTTAAGCACTT+GGG | 0.584844 | 2.4:+22635309 | MS.gene97826:CDS |
AGCTCAGGGAATCAATGGAA+AGG | 0.586442 | 2.4:+22635076 | MS.gene97826:CDS |
GTTATGTCGACTGTAGTCAC+TGG | 0.597307 | 2.4:+22636063 | MS.gene97826:CDS |
GGTTGGACACAATTAGCTCA+GGG | 0.597836 | 2.4:+22635062 | MS.gene97826:CDS |
GTAGCAGAGAACATAGTTGG+TGG | 0.598237 | 2.4:-22633527 | None:intergenic |
CCCTTGAAGCATCATAGAGA+GGG | 0.600300 | 2.4:-22633656 | None:intergenic |
CTTCGAAGATTACAACTAGA+GGG | 0.601080 | 2.4:-22633759 | None:intergenic |
CATGGTTGTTGTAGAGAAGG+TGG | 0.602926 | 2.4:-22633579 | None:intergenic |
CTAACACAGTTAAGGAGGGA+TGG | 0.604483 | 2.4:+22636008 | MS.gene97826:CDS |
TCAAAACCTTGACCAATGAA+AGG | 0.604578 | 2.4:-22633684 | None:intergenic |
TGAAGCATCATAGAGAGGGT+AGG | 0.612829 | 2.4:-22633652 | None:intergenic |
CAACCATGTGACTACTCTCA+AGG | 0.614567 | 2.4:+22633594 | MS.gene97826:CDS |
TCCCTTGAAGCATCATAGAG+AGG | 0.620266 | 2.4:-22633657 | None:intergenic |
GTCTTTACAGTGTCTACACC+AGG | 0.622735 | 2.4:-22635936 | None:intergenic |
AATATGAAGCTTCAATCATG+TGG | 0.632309 | 2.4:+22634981 | MS.gene97826:CDS |
TTTGCTAACACAGTTAAGGA+GGG | 0.649121 | 2.4:+22636004 | MS.gene97826:CDS |
ATTCCATAAGCAATAACATG+TGG | 0.651581 | 2.4:+22634760 | MS.gene97826:CDS |
TTGCCTTGAGAGTAGTCACA+TGG | 0.654201 | 2.4:-22633597 | None:intergenic |
GTGTCTACACCAGGATAAGG+TGG | 0.672854 | 2.4:-22635927 | None:intergenic |
GGTCACCCGTCTATCTACAC+CGG | 0.714846 | 2.4:+22636029 | MS.gene97826:CDS |
AGTCGACATAACTTTCGCCG+CGG | 0.751099 | 2.4:-22636052 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAATCAAGATTTTAACAAA+AGG | - | chr2.4:22635714-22635733 | None:intergenic | 15.0% |
!!! | ATTTTTTTGAACTCAAATTT+TGG | + | chr2.4:22635165-22635184 | MS.gene97826:intron | 15.0% |
!!! | TGAATTTTATTATGATGAAA+TGG | + | chr2.4:22635777-22635796 | MS.gene97826:intron | 15.0% |
!! | AAGATTATATCAAGTATAGA+TGG | + | chr2.4:22633733-22633752 | MS.gene97826:CDS | 20.0% |
!! | ATTCAATGTTTATGTTTGAT+CGG | + | chr2.4:22634223-22634242 | MS.gene97826:intron | 20.0% |
!! | GAAAATAAAAACAAGAACTT+TGG | - | chr2.4:22633843-22633862 | None:intergenic | 20.0% |
!! | TATAAATTAATGAGTAGTAC+CGG | - | chr2.4:22634876-22634895 | None:intergenic | 20.0% |
!!! | AATTTTGGTATTTTTATGTG+AGG | + | chr2.4:22635180-22635199 | MS.gene97826:intron | 20.0% |
!!! | ATTTAATTGTTTTCACAGAT+GGG | + | chr2.4:22635231-22635250 | MS.gene97826:intron | 20.0% |
!!! | TATGTTTTTTTTGTTGTTGT+TGG | + | chr2.4:22633869-22633888 | MS.gene97826:intron | 20.0% |
!!! | TATTTAATTGTTTTCACAGA+TGG | + | chr2.4:22635230-22635249 | MS.gene97826:intron | 20.0% |
!!! | TGAGTTAAAGTTTTGTTTTT+TGG | + | chr2.4:22633793-22633812 | MS.gene97826:intron | 20.0% |
!!! | TGATTTTCAATACATATCAT+TGG | + | chr2.4:22635110-22635129 | MS.gene97826:CDS | 20.0% |
!!! | TTAAATGATTTTGTCTAATG+TGG | + | chr2.4:22634937-22634956 | MS.gene97826:intron | 20.0% |
!!! | TTAAGGTATAAGTTGAATTT+GGG | - | chr2.4:22634818-22634837 | None:intergenic | 20.0% |
!!! | TTATTTTTTAGCTTCTCTAA+TGG | + | chr2.4:22634665-22634684 | MS.gene97826:intron | 20.0% |
!!! | TTCTTTTGTTTGTTTTGTTA+AGG | - | chr2.4:22634835-22634854 | None:intergenic | 20.0% |
! | AAAGACCATTCTAAGTAAAA+TGG | + | chr2.4:22635953-22635972 | MS.gene97826:CDS | 25.0% |
! | ACATTGGGATTTCAAATTAA+AGG | - | chr2.4:22635647-22635666 | None:intergenic | 25.0% |
! | AGTTGGGAATGAATTAATTA+AGG | + | chr2.4:22635264-22635283 | MS.gene97826:CDS | 25.0% |
! | ATGAAAATTCTAGTGGAAAA+GGG | + | chr2.4:22635868-22635887 | MS.gene97826:intron | 25.0% |
! | ATTCTCCTTAGCATTAATTT+CGG | + | chr2.4:22634430-22634449 | MS.gene97826:intron | 25.0% |
! | CAATCATGTGGTTAAAAAAT+GGG | + | chr2.4:22634993-22635012 | MS.gene97826:CDS | 25.0% |
! | CATTCAAGAAAAGAAGAAAA+GGG | - | chr2.4:22635846-22635865 | None:intergenic | 25.0% |
! | CTCAAAAACATAGTTGAAAA+TGG | - | chr2.4:22634147-22634166 | None:intergenic | 25.0% |
! | GAATGAATTAATTAAGGAGA+TGG | + | chr2.4:22635270-22635289 | MS.gene97826:CDS | 25.0% |
! | TAGTAATTCAATGCTTATGT+CGG | + | chr2.4:22634359-22634378 | MS.gene97826:intron | 25.0% |
! | TCAATCATGTGGTTAAAAAA+TGG | + | chr2.4:22634992-22635011 | MS.gene97826:CDS | 25.0% |
! | TCATTCAAGAAAAGAAGAAA+AGG | - | chr2.4:22635847-22635866 | None:intergenic | 25.0% |
! | TTGGTTCATGATAAAGAAAA+GGG | + | chr2.4:22635028-22635047 | MS.gene97826:CDS | 25.0% |
!! | GTTAAGGTATAAGTTGAATT+TGG | - | chr2.4:22634819-22634838 | None:intergenic | 25.0% |
!! | TTTGGAATGTATCTTCAAAT+GGG | + | chr2.4:22633811-22633830 | MS.gene97826:intron | 25.0% |
!! | TTTGGTTCATGATAAAGAAA+AGG | + | chr2.4:22635027-22635046 | MS.gene97826:CDS | 25.0% |
!! | TTTTCAATACATATCATTGG+TGG | + | chr2.4:22635113-22635132 | MS.gene97826:CDS | 25.0% |
!! | TTTTGTCTAATGTGGTTTTT+TGG | + | chr2.4:22634945-22634964 | MS.gene97826:intron | 25.0% |
!!! | AAGTTTTTGGAAAGATACAA+AGG | + | chr2.4:22634714-22634733 | MS.gene97826:CDS | 25.0% |
!!! | ACATAGTTGACTATTTTTAG+TGG | + | chr2.4:22634116-22634135 | MS.gene97826:intron | 25.0% |
!!! | ATTTGGAAGCTTTTAAGATT+GGG | + | chr2.4:22635296-22635315 | MS.gene97826:CDS | 25.0% |
!!! | CATAGTTGACTATTTTTAGT+GGG | + | chr2.4:22634117-22634136 | MS.gene97826:intron | 25.0% |
!!! | TTGTTGTTGGTATGATTTTT+GGG | + | chr2.4:22633882-22633901 | MS.gene97826:intron | 25.0% |
!!! | TTTGTCTAATGTGGTTTTTT+GGG | + | chr2.4:22634946-22634965 | MS.gene97826:intron | 25.0% |
!!! | TTTGTTGTTGTTATTGTTGT+TGG | + | chr2.4:22634033-22634052 | MS.gene97826:intron | 25.0% |
!!! | TTTTGGAATGTATCTTCAAA+TGG | + | chr2.4:22633810-22633829 | MS.gene97826:intron | 25.0% |
AACATTTCATTCCAAGTATC+AGG | - | chr2.4:22636104-22636123 | None:intergenic | 30.0% | |
AATATGAAGCTTCAATCATG+TGG | + | chr2.4:22634981-22635000 | MS.gene97826:CDS | 30.0% | |
AATTAAGGAGATGGATCATT+TGG | + | chr2.4:22635279-22635298 | MS.gene97826:CDS | 30.0% | |
AGACTTAGATGAATGTAATG+TGG | + | chr2.4:22634604-22634623 | MS.gene97826:intron | 30.0% | |
AGGAAAGAAGATAATGTTTG+TGG | + | chr2.4:22634734-22634753 | MS.gene97826:CDS | 30.0% | |
ATAGTCAATCATCCACAAAT+CGG | - | chr2.4:22634085-22634104 | None:intergenic | 30.0% | |
ATTCCATAAGCAATAACATG+TGG | + | chr2.4:22634760-22634779 | MS.gene97826:CDS | 30.0% | |
CATGAAAATTCTAGTGGAAA+AGG | + | chr2.4:22635867-22635886 | MS.gene97826:intron | 30.0% | |
GAATGACATGAAAATTCTAG+TGG | + | chr2.4:22635861-22635880 | MS.gene97826:intron | 30.0% | |
GGAAAGAAGATAATGTTTGT+GGG | + | chr2.4:22634735-22634754 | MS.gene97826:CDS | 30.0% | |
GTTGCAATCTATGTAACATT+GGG | - | chr2.4:22635662-22635681 | None:intergenic | 30.0% | |
TATATGTGATAGTTTCGTGT+TGG | + | chr2.4:22635579-22635598 | MS.gene97826:intron | 30.0% | |
TCTTTATGAATTCTCACTTG+TGG | + | chr2.4:22635459-22635478 | MS.gene97826:intron | 30.0% | |
TTTAAACTCGACACATTGTA+AGG | + | chr2.4:22634301-22634320 | MS.gene97826:intron | 30.0% | |
! | AAACAAAACTCTAGTCTTTG+AGG | - | chr2.4:22635362-22635381 | None:intergenic | 30.0% |
! | AACAAAACTCTAGTCTTTGA+GGG | - | chr2.4:22635361-22635380 | None:intergenic | 30.0% |
! | AAGAAAAGGGAAGAATTTTG+AGG | + | chr2.4:22635041-22635060 | MS.gene97826:CDS | 30.0% |
! | CTCTAATGGTTTTTGTTAAC+AGG | + | chr2.4:22634679-22634698 | MS.gene97826:intron | 30.0% |
! | CTTCTCCATTTTACTTAGAA+TGG | - | chr2.4:22635961-22635980 | None:intergenic | 30.0% |
! | CTTGTGATGGAAAAAAAATG+TGG | - | chr2.4:22634262-22634281 | None:intergenic | 30.0% |
! | GTTAAAAAATGGGTTCTTAG+TGG | + | chr2.4:22635003-22635022 | MS.gene97826:CDS | 30.0% |
! | GTTTTTGTTAACAGGTTTGA+TGG | + | chr2.4:22634687-22634706 | MS.gene97826:intron | 30.0% |
! | TTGTTGTTGGTGTATGATAT+TGG | + | chr2.4:22634046-22634065 | MS.gene97826:intron | 30.0% |
! | TTTCAAATTAAAGGTGTGTC+CGG | - | chr2.4:22635638-22635657 | None:intergenic | 30.0% |
!! | AAGTTTTGTCTCACTAAATG+AGG | - | chr2.4:22634015-22634034 | None:intergenic | 30.0% |
!! | GTTGTTGTTGGTATGATTTT+TGG | + | chr2.4:22633881-22633900 | MS.gene97826:intron | 30.0% |
!!! | AAAGACTAGAGTTTTGTTTC+AGG | + | chr2.4:22635363-22635382 | MS.gene97826:CDS | 30.0% |
!!! | AAGACTAGAGTTTTGTTTCA+GGG | + | chr2.4:22635364-22635383 | MS.gene97826:CDS | 30.0% |
!!! | AGATGGGATTATTTTCAAGT+TGG | + | chr2.4:22635247-22635266 | MS.gene97826:intron | 30.0% |
!!! | CACATTTTTTTTCCATCACA+AGG | + | chr2.4:22634260-22634279 | MS.gene97826:intron | 30.0% |
!!! | CATTTGGAAGCTTTTAAGAT+TGG | + | chr2.4:22635295-22635314 | MS.gene97826:CDS | 30.0% |
!!! | GATGGGATTATTTTCAAGTT+GGG | + | chr2.4:22635248-22635267 | MS.gene97826:intron | 30.0% |
!!! | TGATTTTTGGGTGAAACTAT+AGG | + | chr2.4:22633894-22633913 | MS.gene97826:intron | 30.0% |
!!! | TTCAACTATGTTTTTGAGAC+CGG | + | chr2.4:22634149-22634168 | MS.gene97826:intron | 30.0% |
!!! | TTGTCTAATGTGGTTTTTTG+GGG | + | chr2.4:22634947-22634966 | MS.gene97826:intron | 30.0% |
AAATCCAGACATTCATTGAG+TGG | - | chr2.4:22635430-22635449 | None:intergenic | 35.0% | |
AATGTTGGAATCAACCCATT+TGG | - | chr2.4:22635335-22635354 | None:intergenic | 35.0% | |
AGACAAACTAAACCAGATCA+AGG | + | chr2.4:22635897-22635916 | MS.gene97826:CDS | 35.0% | |
CGTTGCAATCTATGTAACAT+TGG | - | chr2.4:22635663-22635682 | None:intergenic | 35.0% | |
CTTCGAAGATTACAACTAGA+GGG | - | chr2.4:22633762-22633781 | None:intergenic | 35.0% | |
GAATTTGAGCATGTGGTTAA+TGG | + | chr2.4:22635202-22635221 | MS.gene97826:intron | 35.0% | |
TAAGATTGGGTTAAGCACTT+GGG | + | chr2.4:22635309-22635328 | MS.gene97826:CDS | 35.0% | |
TCAAAACCTTGACCAATGAA+AGG | - | chr2.4:22633687-22633706 | None:intergenic | 35.0% | |
TCACTTTGCTAACACAGTTA+AGG | + | chr2.4:22636000-22636019 | MS.gene97826:CDS | 35.0% | |
TCCTTAGCATTAATTTCGGT+GGG | + | chr2.4:22634434-22634453 | MS.gene97826:intron | 35.0% | |
TTAAGATTGGGTTAAGCACT+TGG | + | chr2.4:22635308-22635327 | MS.gene97826:CDS | 35.0% | |
TTGCCACATGTTATTGCTTA+TGG | - | chr2.4:22634766-22634785 | None:intergenic | 35.0% | |
TTTGCTAACACAGTTAAGGA+GGG | + | chr2.4:22636004-22636023 | MS.gene97826:CDS | 35.0% | |
TTTGTTAACAGGTTTGATGG+TGG | + | chr2.4:22634690-22634709 | MS.gene97826:intron | 35.0% | |
! | CTCAATGAATGTCTGGATTT+TGG | + | chr2.4:22635430-22635449 | MS.gene97826:intron | 35.0% |
! | TACTAGCTTCAGCATTTCTA+TGG | + | chr2.4:22633547-22633566 | MS.gene97826:CDS | 35.0% |
! | TTGTTAACAGGTTTGATGGT+GGG | + | chr2.4:22634691-22634710 | MS.gene97826:intron | 35.0% |
!! | AAATGGGTTCTTAGTGGATT+TGG | + | chr2.4:22635009-22635028 | MS.gene97826:CDS | 35.0% |
!! | ATGAAGTTTCAACCGATTTG+TGG | + | chr2.4:22634070-22634089 | MS.gene97826:intron | 35.0% |
!!! | AAAGGGAAGAATTTTGAGGT+TGG | + | chr2.4:22635045-22635064 | MS.gene97826:CDS | 35.0% |
!!! | GGTTTTGATTGTCTTGGAAA+TGG | + | chr2.4:22633699-22633718 | MS.gene97826:CDS | 35.0% |
!!! | TCAACTATGTTTTTGAGACC+GGG | + | chr2.4:22634150-22634169 | MS.gene97826:intron | 35.0% |
!!! | TGTCTAATGTGGTTTTTTGG+GGG | + | chr2.4:22634948-22634967 | MS.gene97826:intron | 35.0% |
ACTCACTGTGTTCTCAATTC+CGG | + | chr2.4:22634854-22634873 | MS.gene97826:CDS | 40.0% | |
ATAGATTGCAACGTGTTCGA+CGG | + | chr2.4:22635670-22635689 | MS.gene97826:intron | 40.0% | |
ATGTGAGGAATTTGAGCATG+TGG | + | chr2.4:22635195-22635214 | MS.gene97826:intron | 40.0% | |
CAATTAGCTCAGGGAATCAA+TGG | + | chr2.4:22635071-22635090 | MS.gene97826:CDS | 40.0% | |
CCTCTAGTTGTAATCTTCGA+AGG | + | chr2.4:22633760-22633779 | MS.gene97826:CDS | 40.0% | |
CCTTCGAAGATTACAACTAG+AGG | - | chr2.4:22633763-22633782 | None:intergenic | 40.0% | |
CTAGTAGCAGAGAACATAGT+TGG | - | chr2.4:22633533-22633552 | None:intergenic | 40.0% | |
CTCCAGTTTGATTCTTGTGA+CGG | - | chr2.4:22634556-22634575 | None:intergenic | 40.0% | |
CTCCTTAGCATTAATTTCGG+TGG | + | chr2.4:22634433-22634452 | MS.gene97826:intron | 40.0% | |
CTTTGCTAACACAGTTAAGG+AGG | + | chr2.4:22636003-22636022 | MS.gene97826:CDS | 40.0% | |
GATCTGAGTCTGATTACACT+TGG | + | chr2.4:22634172-22634191 | MS.gene97826:intron | 40.0% | |
GTGATGTCAAGCAATTGTAC+TGG | - | chr2.4:22635984-22636003 | None:intergenic | 40.0% | |
TCACATGGTTGTTGTAGAGA+AGG | - | chr2.4:22633585-22633604 | None:intergenic | 40.0% | |
TCTATTACGTGTCAGAGAGT+CGG | - | chr2.4:22635608-22635627 | None:intergenic | 40.0% | |
TCTTCCACTCAATGAATGTC+TGG | + | chr2.4:22635423-22635442 | MS.gene97826:intron | 40.0% | |
TTCCGTCACAAGAATCAAAC+TGG | + | chr2.4:22634551-22634570 | MS.gene97826:intron | 40.0% | |
! | AGTCTTTGAGGGTTCAATGT+TGG | - | chr2.4:22635350-22635369 | None:intergenic | 40.0% |
!! | TATCATTGGTGGACTCATAC+TGG | + | chr2.4:22635124-22635143 | MS.gene97826:CDS | 40.0% |
!!! | GGTCAAGGTTTTGATTGTCT+TGG | + | chr2.4:22633693-22633712 | MS.gene97826:CDS | 40.0% |
!!! | GTCTAATGTGGTTTTTTGGG+GGG | + | chr2.4:22634949-22634968 | MS.gene97826:intron | 40.0% |
!!! | GTTTGATGGTGGGAAGTTTT+TGG | + | chr2.4:22634701-22634720 | MS.gene97826:CDS | 40.0% |
ACACGTAATAGACACTGGAC+CGG | + | chr2.4:22635616-22635635 | MS.gene97826:intron | 45.0% | |
ACAGTGTCTACACCAGGATA+AGG | - | chr2.4:22635933-22635952 | None:intergenic | 45.0% | |
ACCCTCTCTATGATGCTTCA+AGG | + | chr2.4:22633655-22633674 | MS.gene97826:CDS | 45.0% | |
AGCTCAGGGAATCAATGGAA+AGG | + | chr2.4:22635076-22635095 | MS.gene97826:CDS | 45.0% | |
AGGTTGGACACAATTAGCTC+AGG | + | chr2.4:22635061-22635080 | MS.gene97826:CDS | 45.0% | |
ATCATAGAGAGGGTAGGAGA+AGG | - | chr2.4:22633649-22633668 | None:intergenic | 45.0% | |
CAACCATGTGACTACTCTCA+AGG | + | chr2.4:22633594-22633613 | MS.gene97826:CDS | 45.0% | |
CATGGTTGTTGTAGAGAAGG+TGG | - | chr2.4:22633582-22633601 | None:intergenic | 45.0% | |
CCCTCTCTATGATGCTTCAA+GGG | + | chr2.4:22633656-22633675 | MS.gene97826:CDS | 45.0% | |
CTAACACAGTTAAGGAGGGA+TGG | + | chr2.4:22636008-22636027 | MS.gene97826:CDS | 45.0% | |
CTCTGACACGTAATAGACAC+TGG | + | chr2.4:22635611-22635630 | MS.gene97826:intron | 45.0% | |
GACTGTCCTTTCATTGGTCA+AGG | + | chr2.4:22633678-22633697 | MS.gene97826:CDS | 45.0% | |
GCCCACCGAAATTAATGCTA+AGG | - | chr2.4:22634438-22634457 | None:intergenic | 45.0% | |
GGTTGGACACAATTAGCTCA+GGG | + | chr2.4:22635062-22635081 | MS.gene97826:CDS | 45.0% | |
GTAGCAGAGAACATAGTTGG+TGG | - | chr2.4:22633530-22633549 | None:intergenic | 45.0% | |
GTCTTTACAGTGTCTACACC+AGG | - | chr2.4:22635939-22635958 | None:intergenic | 45.0% | |
GTGTAATCAGACTCAGATCC+CGG | - | chr2.4:22634171-22634190 | None:intergenic | 45.0% | |
GTTAAGCACTTGGGCCAAAT+GGG | + | chr2.4:22635318-22635337 | MS.gene97826:CDS | 45.0% | |
TCAAGGGACTGTCCTTTCAT+TGG | + | chr2.4:22633672-22633691 | MS.gene97826:CDS | 45.0% | |
TTGCCTTGAGAGTAGTCACA+TGG | - | chr2.4:22633600-22633619 | None:intergenic | 45.0% | |
TTGCTGGTGTTCCTGATACT+TGG | + | chr2.4:22636090-22636109 | MS.gene97826:CDS | 45.0% | |
! | CCCTTGAAGCATCATAGAGA+GGG | - | chr2.4:22633659-22633678 | None:intergenic | 45.0% |
! | GTTATGTCGACTGTAGTCAC+TGG | + | chr2.4:22636063-22636082 | MS.gene97826:CDS | 45.0% |
! | TCCCTTGAAGCATCATAGAG+AGG | - | chr2.4:22633660-22633679 | None:intergenic | 45.0% |
! | TGAAGCATCATAGAGAGGGT+AGG | - | chr2.4:22633655-22633674 | None:intergenic | 45.0% |
! | TGTGCTACTCTCAACTCTCA+AGG | + | chr2.4:22634397-22634416 | MS.gene97826:intron | 45.0% |
! | TTCTTGTGACGGAAACAACG+TGG | - | chr2.4:22634545-22634564 | None:intergenic | 45.0% |
ACACCAGGATAAGGTGGCAT+TGG | - | chr2.4:22635924-22635943 | None:intergenic | 50.0% | |
AGTCGACATAACTTTCGCCG+CGG | - | chr2.4:22636055-22636074 | None:intergenic | 50.0% | |
GAGAGTTGAGAGTAGCACAC+TGG | - | chr2.4:22634396-22634415 | None:intergenic | 50.0% | |
GGTTAAGCACTTGGGCCAAA+TGG | + | chr2.4:22635317-22635336 | MS.gene97826:CDS | 50.0% | |
GTGACTACTCTCAAGGCAAC+TGG | + | chr2.4:22633601-22633620 | MS.gene97826:CDS | 50.0% | |
GTGTCTACACCAGGATAAGG+TGG | - | chr2.4:22635930-22635949 | None:intergenic | 50.0% | |
GTTGAGAGTAGCACACTGGA+AGG | - | chr2.4:22634392-22634411 | None:intergenic | 50.0% | |
TGTAGTCACTGGTGTCTTGC+TGG | + | chr2.4:22636074-22636093 | MS.gene97826:CDS | 50.0% | |
! | CTCGAGTTTGAGCCTTGTGA+TGG | - | chr2.4:22634275-22634294 | None:intergenic | 50.0% |
!!! | GGTTTTTTGGGGGGTGTCAT+AGG | + | chr2.4:22634958-22634977 | MS.gene97826:intron | 50.0% |
GGACCAATGCCACCTTATCC+TGG | + | chr2.4:22635918-22635937 | MS.gene97826:CDS | 55.0% | |
GGTCACCCGTCTATCTACAC+CGG | + | chr2.4:22636029-22636048 | MS.gene97826:CDS | 55.0% | |
!! | GGTGGCATTGGTCCTTGATC+TGG | - | chr2.4:22635912-22635931 | None:intergenic | 55.0% |
GACATAACTTTCGCCGCGGC+CGG | - | chr2.4:22636051-22636070 | None:intergenic | 60.0% | |
CCGCGGCCGGTGTAGATAGA+CGG | - | chr2.4:22636038-22636057 | None:intergenic | 65.0% | |
CCGTCTATCTACACCGGCCG+CGG | + | chr2.4:22636035-22636054 | MS.gene97826:CDS | 65.0% | |
CGCGGCCGGTGTAGATAGAC+GGG | - | chr2.4:22636037-22636056 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 22633513 | 22636148 | 22633513 | ID=MS.gene97826 |
chr2.4 | mRNA | 22633513 | 22636148 | 22633513 | ID=MS.gene97826.t1;Parent=MS.gene97826 |
chr2.4 | exon | 22633513 | 22633781 | 22633513 | ID=MS.gene97826.t1.exon1;Parent=MS.gene97826.t1 |
chr2.4 | CDS | 22633513 | 22633781 | 22633513 | ID=cds.MS.gene97826.t1;Parent=MS.gene97826.t1 |
chr2.4 | exon | 22634701 | 22634875 | 22634701 | ID=MS.gene97826.t1.exon2;Parent=MS.gene97826.t1 |
chr2.4 | CDS | 22634701 | 22634875 | 22634701 | ID=cds.MS.gene97826.t1;Parent=MS.gene97826.t1 |
chr2.4 | exon | 22634980 | 22635158 | 22634980 | ID=MS.gene97826.t1.exon3;Parent=MS.gene97826.t1 |
chr2.4 | CDS | 22634980 | 22635158 | 22634980 | ID=cds.MS.gene97826.t1;Parent=MS.gene97826.t1 |
chr2.4 | exon | 22635249 | 22635407 | 22635249 | ID=MS.gene97826.t1.exon4;Parent=MS.gene97826.t1 |
chr2.4 | CDS | 22635249 | 22635407 | 22635249 | ID=cds.MS.gene97826.t1;Parent=MS.gene97826.t1 |
chr2.4 | exon | 22635881 | 22636148 | 22635881 | ID=MS.gene97826.t1.exon5;Parent=MS.gene97826.t1 |
chr2.4 | CDS | 22635881 | 22636148 | 22635881 | ID=cds.MS.gene97826.t1;Parent=MS.gene97826.t1 |
Gene Sequence |
Protein sequence |