Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98135.t1 | XP_013454487.1 | 99 | 295 | 3 | 0 | 1 | 295 | 67 | 361 | 4.80E-164 | 587 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98135.t1 | Q9LJX5 | 76.0 | 288 | 69 | 0 | 1 | 288 | 53 | 340 | 1.6e-128 | 460.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98135.t1 | A0A072UFQ9 | 99.0 | 295 | 3 | 0 | 1 | 295 | 67 | 361 | 3.4e-164 | 587.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37414 | MS.gene98135 | PPI |
| MS.gene66338 | MS.gene98135 | PPI |
| MS.gene32489 | MS.gene98135 | PPI |
| MS.gene29549 | MS.gene98135 | PPI |
| MS.gene074631 | MS.gene98135 | PPI |
| MS.gene59586 | MS.gene98135 | PPI |
| MS.gene015005 | MS.gene98135 | PPI |
| MS.gene75068 | MS.gene98135 | PPI |
| MS.gene058503 | MS.gene98135 | PPI |
| MS.gene98135 | MS.gene32803 | PPI |
| MS.gene95300 | MS.gene98135 | PPI |
| MS.gene98135 | MS.gene074632 | PPI |
| MS.gene064041 | MS.gene98135 | PPI |
| MS.gene79746 | MS.gene98135 | PPI |
| MS.gene030289 | MS.gene98135 | PPI |
| MS.gene066511 | MS.gene98135 | PPI |
| MS.gene29547 | MS.gene98135 | PPI |
| MS.gene064047 | MS.gene98135 | PPI |
| MS.gene064043 | MS.gene98135 | PPI |
| MS.gene046369 | MS.gene98135 | PPI |
| MS.gene98135 | MS.gene50108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98135.t1 | MTR_4g005330 | 98.983 | 295 | 3 | 0 | 1 | 295 | 67 | 361 | 0.0 | 601 |
| MS.gene98135.t1 | MTR_4g005330 | 98.983 | 295 | 3 | 0 | 1 | 295 | 1 | 295 | 0.0 | 597 |
| MS.gene98135.t1 | MTR_1g012030 | 41.522 | 289 | 151 | 3 | 1 | 288 | 140 | 411 | 2.40e-74 | 234 |
| MS.gene98135.t1 | MTR_3g107510 | 40.278 | 288 | 154 | 3 | 2 | 288 | 124 | 394 | 2.94e-72 | 228 |
| MS.gene98135.t1 | MTR_3g107510 | 24.615 | 195 | 120 | 5 | 1 | 188 | 217 | 391 | 1.14e-12 | 68.2 |
| MS.gene98135.t1 | MTR_4g114320 | 39.792 | 289 | 156 | 3 | 1 | 288 | 124 | 395 | 7.67e-72 | 227 |
| MS.gene98135.t1 | MTR_2g436930 | 29.412 | 323 | 176 | 9 | 2 | 287 | 17 | 324 | 1.27e-36 | 133 |
| MS.gene98135.t1 | MTR_5g009500 | 27.385 | 325 | 187 | 7 | 1 | 294 | 39 | 345 | 7.11e-35 | 129 |
| MS.gene98135.t1 | MTR_5g009500 | 29.870 | 231 | 142 | 7 | 78 | 291 | 1 | 228 | 2.13e-15 | 75.9 |
| MS.gene98135.t1 | MTR_4g119770 | 28.000 | 325 | 180 | 9 | 2 | 287 | 16 | 325 | 7.31e-35 | 129 |
| MS.gene98135.t1 | MTR_8g027975 | 29.141 | 326 | 182 | 9 | 1 | 294 | 52 | 360 | 1.89e-34 | 128 |
| MS.gene98135.t1 | MTR_8g027975 | 29.358 | 218 | 129 | 6 | 91 | 295 | 40 | 245 | 1.25e-15 | 76.6 |
| MS.gene98135.t1 | MTR_3g104600 | 27.937 | 315 | 172 | 9 | 1 | 284 | 36 | 326 | 4.09e-33 | 124 |
| MS.gene98135.t1 | MTR_8g096050 | 30.333 | 300 | 165 | 10 | 1 | 284 | 228 | 499 | 1.05e-32 | 126 |
| MS.gene98135.t1 | MTR_8g096050 | 29.609 | 179 | 118 | 3 | 112 | 286 | 228 | 402 | 5.84e-14 | 72.4 |
| MS.gene98135.t1 | MTR_3g098460 | 30.667 | 300 | 176 | 10 | 1 | 290 | 206 | 483 | 2.64e-32 | 124 |
| MS.gene98135.t1 | MTR_7g068340 | 28.920 | 287 | 166 | 8 | 11 | 287 | 98 | 356 | 2.77e-29 | 115 |
| MS.gene98135.t1 | MTR_7g068340 | 24.064 | 187 | 121 | 2 | 2 | 188 | 189 | 354 | 5.99e-13 | 68.9 |
| MS.gene98135.t1 | MTR_7g084400 | 29.097 | 299 | 179 | 8 | 1 | 290 | 214 | 488 | 4.96e-29 | 115 |
| MS.gene98135.t1 | MTR_2g436930 | 31.048 | 248 | 136 | 6 | 60 | 287 | 2 | 234 | 1.29e-28 | 110 |
| MS.gene98135.t1 | MTR_2g436930 | 25.000 | 200 | 124 | 3 | 1 | 184 | 39 | 228 | 2.87e-14 | 71.2 |
| MS.gene98135.t1 | MTR_6g091800 | 25.000 | 312 | 188 | 9 | 1 | 289 | 20 | 308 | 1.37e-28 | 112 |
| MS.gene98135.t1 | MTR_7g064980 | 25.743 | 303 | 195 | 6 | 1 | 287 | 26 | 314 | 1.43e-28 | 112 |
| MS.gene98135.t1 | MTR_5g081150 | 26.333 | 300 | 195 | 6 | 1 | 287 | 35 | 321 | 4.07e-27 | 108 |
| MS.gene98135.t1 | MTR_8g090210 | 26.452 | 310 | 186 | 6 | 2 | 290 | 112 | 400 | 5.11e-27 | 109 |
| MS.gene98135.t1 | MTR_1g097890 | 29.617 | 287 | 168 | 7 | 1 | 287 | 52 | 304 | 8.37e-27 | 107 |
| MS.gene98135.t1 | MTR_7g109135 | 30.065 | 306 | 173 | 10 | 2 | 288 | 24 | 307 | 6.07e-26 | 104 |
| MS.gene98135.t1 | MTR_7g109135 | 28.571 | 196 | 124 | 5 | 111 | 291 | 22 | 216 | 1.26e-12 | 67.4 |
| MS.gene98135.t1 | MTR_3g074490 | 25.484 | 310 | 189 | 6 | 2 | 290 | 118 | 406 | 6.42e-26 | 106 |
| MS.gene98135.t1 | MTR_4g119770 | 27.799 | 259 | 143 | 8 | 2 | 231 | 16 | 259 | 1.05e-25 | 103 |
| MS.gene98135.t1 | MTR_4g119770 | 25.641 | 195 | 119 | 4 | 113 | 284 | 16 | 207 | 3.95e-14 | 71.2 |
| MS.gene98135.t1 | MTR_6g091800 | 24.528 | 318 | 206 | 8 | 1 | 289 | 20 | 332 | 1.26e-25 | 104 |
| MS.gene98135.t1 | MTR_7g109135 | 29.766 | 299 | 176 | 9 | 2 | 288 | 24 | 300 | 7.16e-25 | 101 |
| MS.gene98135.t1 | MTR_6g034145 | 24.275 | 276 | 168 | 8 | 33 | 289 | 1 | 254 | 1.80e-23 | 97.1 |
| MS.gene98135.t1 | MTR_4g016730 | 27.178 | 287 | 168 | 10 | 11 | 287 | 100 | 355 | 2.23e-23 | 99.0 |
| MS.gene98135.t1 | MTR_6g091800 | 25.498 | 251 | 144 | 8 | 1 | 231 | 20 | 247 | 2.49e-22 | 94.0 |
| MS.gene98135.t1 | MTR_6g091800 | 26.984 | 189 | 115 | 6 | 114 | 284 | 23 | 206 | 2.06e-11 | 63.5 |
| MS.gene98135.t1 | MTR_6g091800 | 25.498 | 251 | 144 | 8 | 1 | 231 | 20 | 247 | 2.62e-22 | 94.0 |
| MS.gene98135.t1 | MTR_6g091800 | 26.984 | 189 | 115 | 6 | 114 | 284 | 23 | 206 | 2.95e-11 | 63.2 |
| MS.gene98135.t1 | MTR_8g092080 | 27.458 | 295 | 172 | 9 | 1 | 291 | 53 | 309 | 5.06e-22 | 94.4 |
| MS.gene98135.t1 | MTR_6g092210 | 22.878 | 271 | 172 | 6 | 33 | 289 | 1 | 248 | 5.62e-22 | 92.8 |
| MS.gene98135.t1 | MTR_6g091800 | 23.826 | 298 | 193 | 8 | 1 | 269 | 20 | 312 | 4.77e-21 | 91.3 |
| MS.gene98135.t1 | MTR_3g104500 | 26.299 | 308 | 180 | 11 | 1 | 284 | 35 | 319 | 4.68e-20 | 89.0 |
| MS.gene98135.t1 | MTR_6g091800 | 24.903 | 257 | 162 | 7 | 1 | 231 | 20 | 271 | 1.49e-19 | 87.0 |
| MS.gene98135.t1 | MTR_1g087840 | 27.986 | 293 | 174 | 8 | 13 | 288 | 32 | 304 | 1.61e-19 | 87.0 |
| MS.gene98135.t1 | MTR_6g091800 | 24.903 | 257 | 162 | 7 | 1 | 231 | 20 | 271 | 1.87e-19 | 86.7 |
| MS.gene98135.t1 | MTR_8g076760 | 25.685 | 292 | 173 | 7 | 14 | 281 | 28 | 299 | 1.26e-18 | 84.7 |
| MS.gene98135.t1 | MTR_5g073040 | 23.746 | 299 | 192 | 7 | 1 | 287 | 40 | 314 | 1.10e-17 | 82.0 |
| MS.gene98135.t1 | MTR_8g098240 | 24.422 | 303 | 189 | 7 | 1 | 293 | 321 | 593 | 1.39e-17 | 83.2 |
| MS.gene98135.t1 | MTR_6g091910 | 28.125 | 192 | 118 | 6 | 114 | 289 | 23 | 210 | 7.24e-17 | 78.2 |
| MS.gene98135.t1 | MTR_7g109135 | 29.084 | 251 | 145 | 8 | 49 | 288 | 1 | 229 | 7.60e-17 | 78.6 |
| MS.gene98135.t1 | MTR_2g098070 | 25.692 | 253 | 162 | 5 | 31 | 275 | 107 | 341 | 3.06e-16 | 78.6 |
| MS.gene98135.t1 | MTR_7g109135 | 30.986 | 213 | 120 | 7 | 87 | 288 | 12 | 208 | 1.31e-15 | 74.7 |
| MS.gene98135.t1 | MTR_7g084400 | 27.679 | 224 | 139 | 6 | 1 | 218 | 208 | 414 | 1.56e-15 | 76.6 |
| MS.gene98135.t1 | MTR_7g084400 | 26.842 | 190 | 126 | 4 | 112 | 292 | 208 | 393 | 4.54e-13 | 69.3 |
| MS.gene98135.t1 | MTR_8g107270 | 23.948 | 309 | 166 | 11 | 1 | 275 | 20 | 293 | 3.77e-15 | 74.7 |
| MS.gene98135.t1 | MTR_6g034515 | 25.430 | 291 | 172 | 7 | 10 | 284 | 77 | 338 | 4.92e-15 | 75.1 |
| MS.gene98135.t1 | MTR_3g028590 | 23.469 | 294 | 183 | 7 | 3 | 275 | 100 | 372 | 1.06e-14 | 73.9 |
| MS.gene98135.t1 | MTR_3g028590 | 23.469 | 294 | 183 | 7 | 3 | 275 | 96 | 368 | 1.16e-14 | 73.9 |
| MS.gene98135.t1 | MTR_4g078545 | 23.810 | 294 | 182 | 7 | 3 | 275 | 78 | 350 | 2.07e-14 | 73.2 |
| MS.gene98135.t1 | MTR_1g095780 | 26.042 | 288 | 171 | 11 | 1 | 281 | 526 | 778 | 2.21e-14 | 73.9 |
| MS.gene98135.t1 | MTR_5g055410 | 26.531 | 294 | 179 | 11 | 12 | 288 | 33 | 306 | 3.60e-14 | 72.4 |
| MS.gene98135.t1 | MTR_5g081910 | 22.476 | 307 | 186 | 11 | 13 | 281 | 21 | 313 | 6.39e-14 | 71.6 |
| MS.gene98135.t1 | MTR_8g036880 | 23.051 | 295 | 184 | 6 | 3 | 275 | 105 | 378 | 1.09e-13 | 71.2 |
| MS.gene98135.t1 | MTR_4g012850 | 22.993 | 274 | 184 | 5 | 16 | 281 | 32 | 286 | 7.09e-13 | 68.2 |
| MS.gene98135.t1 | MTR_7g015870 | 27.473 | 182 | 114 | 4 | 112 | 280 | 26 | 202 | 1.91e-12 | 67.0 |
| MS.gene98135.t1 | MTR_7g015870 | 27.473 | 182 | 114 | 4 | 112 | 280 | 22 | 198 | 2.02e-12 | 67.0 |
| MS.gene98135.t1 | MTR_8g066975 | 25.926 | 189 | 126 | 3 | 112 | 287 | 109 | 296 | 4.53e-12 | 65.9 |
| MS.gene98135.t1 | MTR_5g081150 | 23.789 | 227 | 150 | 5 | 1 | 217 | 35 | 248 | 6.93e-12 | 64.7 |
| MS.gene98135.t1 | MTR_5g081150 | 23.789 | 227 | 150 | 5 | 1 | 217 | 35 | 248 | 7.94e-12 | 64.7 |
| MS.gene98135.t1 | MTR_5g030530 | 25.397 | 189 | 127 | 4 | 112 | 287 | 109 | 296 | 4.79e-11 | 62.8 |
| MS.gene98135.t1 | MTR_3g025800 | 26.761 | 213 | 128 | 5 | 99 | 285 | 16 | 226 | 5.01e-11 | 63.2 |
| MS.gene98135.t1 | MTR_2g032610 | 23.675 | 283 | 187 | 8 | 3 | 269 | 32 | 301 | 6.18e-11 | 62.4 |
| MS.gene98135.t1 | MTR_6g015860 | 25.989 | 177 | 123 | 4 | 112 | 280 | 18 | 194 | 7.89e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98135.t1 | AT3G20240 | 76.042 | 288 | 69 | 0 | 1 | 288 | 53 | 340 | 1.37e-167 | 469 |
| MS.gene98135.t1 | AT4G32400 | 39.446 | 289 | 157 | 3 | 1 | 288 | 115 | 386 | 1.69e-69 | 221 |
| MS.gene98135.t1 | AT3G21390 | 29.231 | 325 | 172 | 10 | 2 | 285 | 21 | 328 | 2.72e-34 | 127 |
| MS.gene98135.t1 | AT3G21390 | 27.461 | 193 | 118 | 4 | 111 | 284 | 19 | 208 | 2.31e-15 | 75.9 |
| MS.gene98135.t1 | AT3G21390 | 29.231 | 325 | 172 | 10 | 2 | 285 | 43 | 350 | 3.85e-34 | 127 |
| MS.gene98135.t1 | AT3G21390 | 27.461 | 193 | 118 | 4 | 111 | 284 | 41 | 230 | 2.20e-15 | 75.9 |
| MS.gene98135.t1 | AT4G01100 | 29.052 | 327 | 181 | 10 | 1 | 294 | 43 | 351 | 1.10e-33 | 126 |
| MS.gene98135.t1 | AT4G01100 | 28.856 | 201 | 127 | 5 | 101 | 288 | 32 | 229 | 1.73e-15 | 76.3 |
| MS.gene98135.t1 | AT4G01100 | 29.154 | 319 | 175 | 10 | 9 | 294 | 1 | 301 | 2.69e-32 | 121 |
| MS.gene98135.t1 | AT5G48970 | 27.914 | 326 | 180 | 10 | 2 | 287 | 24 | 334 | 4.95e-32 | 121 |
| MS.gene98135.t1 | AT5G48970 | 26.667 | 195 | 119 | 5 | 111 | 284 | 22 | 213 | 1.32e-13 | 70.5 |
| MS.gene98135.t1 | AT3G53940 | 27.815 | 302 | 188 | 7 | 1 | 287 | 74 | 360 | 1.64e-31 | 120 |
| MS.gene98135.t1 | AT4G01100 | 27.859 | 341 | 181 | 11 | 1 | 294 | 43 | 365 | 5.81e-31 | 119 |
| MS.gene98135.t1 | AT4G01100 | 29.302 | 215 | 122 | 7 | 101 | 288 | 32 | 243 | 6.35e-15 | 74.7 |
| MS.gene98135.t1 | AT3G51870 | 29.720 | 286 | 165 | 7 | 11 | 287 | 102 | 360 | 2.01e-30 | 118 |
| MS.gene98135.t1 | AT3G55640 | 28.763 | 299 | 183 | 8 | 1 | 284 | 39 | 322 | 5.19e-30 | 116 |
| MS.gene98135.t1 | AT3G55640 | 28.763 | 299 | 183 | 8 | 1 | 284 | 39 | 322 | 5.19e-30 | 116 |
| MS.gene98135.t1 | AT5G51050 | 28.283 | 297 | 178 | 7 | 1 | 287 | 224 | 495 | 4.70e-29 | 115 |
| MS.gene98135.t1 | AT5G48970 | 29.044 | 272 | 155 | 7 | 39 | 287 | 7 | 263 | 1.28e-28 | 110 |
| MS.gene98135.t1 | AT5G48970 | 27.363 | 201 | 121 | 8 | 1 | 184 | 65 | 257 | 4.91e-13 | 68.2 |
| MS.gene98135.t1 | AT5G48970 | 26.761 | 142 | 96 | 3 | 148 | 284 | 4 | 142 | 7.57e-11 | 62.0 |
| MS.gene98135.t1 | AT2G37890 | 25.828 | 302 | 194 | 8 | 1 | 287 | 46 | 332 | 1.81e-27 | 109 |
| MS.gene98135.t1 | AT2G37890 | 28.372 | 215 | 120 | 6 | 97 | 284 | 23 | 230 | 1.30e-12 | 67.8 |
| MS.gene98135.t1 | AT1G34065 | 29.617 | 287 | 168 | 8 | 1 | 287 | 76 | 328 | 1.14e-26 | 107 |
| MS.gene98135.t1 | AT1G34065 | 29.617 | 287 | 168 | 8 | 1 | 287 | 83 | 335 | 1.22e-26 | 107 |
| MS.gene98135.t1 | AT5G01500 | 28.571 | 287 | 167 | 8 | 11 | 287 | 130 | 388 | 1.38e-26 | 108 |
| MS.gene98135.t1 | AT5G61810 | 27.517 | 298 | 180 | 8 | 1 | 290 | 66 | 335 | 1.59e-26 | 106 |
| MS.gene98135.t1 | AT5G61810 | 27.517 | 298 | 180 | 8 | 1 | 290 | 209 | 478 | 8.39e-26 | 106 |
| MS.gene98135.t1 | AT5G64970 | 25.890 | 309 | 187 | 6 | 3 | 290 | 14 | 301 | 2.87e-25 | 102 |
| MS.gene98135.t1 | AT5G64970 | 26.129 | 310 | 187 | 6 | 2 | 290 | 137 | 425 | 3.95e-25 | 104 |
| MS.gene98135.t1 | AT1G14560 | 26.578 | 301 | 173 | 7 | 11 | 284 | 38 | 317 | 5.26e-25 | 102 |
| MS.gene98135.t1 | AT1G78180 | 27.508 | 309 | 184 | 5 | 2 | 290 | 130 | 418 | 2.36e-24 | 102 |
| MS.gene98135.t1 | AT4G26180 | 24.595 | 309 | 184 | 9 | 1 | 284 | 22 | 306 | 2.64e-23 | 97.8 |
| MS.gene98135.t1 | AT5G07320 | 27.526 | 287 | 170 | 8 | 7 | 284 | 216 | 473 | 3.28e-21 | 93.6 |
| MS.gene98135.t1 | AT1G14560 | 26.923 | 286 | 161 | 8 | 11 | 269 | 38 | 302 | 4.50e-21 | 91.3 |
| MS.gene98135.t1 | AT1G14560 | 26.404 | 178 | 113 | 5 | 124 | 284 | 40 | 216 | 4.26e-11 | 63.2 |
| MS.gene98135.t1 | AT5G66380 | 26.490 | 302 | 181 | 7 | 2 | 281 | 12 | 294 | 1.18e-20 | 90.1 |
| MS.gene98135.t1 | AT5G66380 | 26.154 | 195 | 135 | 3 | 102 | 288 | 1 | 194 | 3.19e-13 | 69.3 |
| MS.gene98135.t1 | AT4G26180 | 24.150 | 294 | 174 | 9 | 1 | 269 | 22 | 291 | 4.56e-20 | 88.2 |
| MS.gene98135.t1 | AT4G26180 | 26.020 | 196 | 131 | 4 | 103 | 284 | 13 | 208 | 4.22e-13 | 68.6 |
| MS.gene98135.t1 | AT1G14560 | 28.426 | 197 | 114 | 4 | 112 | 284 | 26 | 219 | 4.75e-20 | 87.0 |
| MS.gene98135.t1 | AT5G64970 | 25.260 | 289 | 174 | 6 | 2 | 269 | 137 | 404 | 9.04e-19 | 86.3 |
| MS.gene98135.t1 | AT2G47490 | 28.188 | 298 | 170 | 10 | 13 | 290 | 30 | 303 | 1.08e-18 | 84.7 |
| MS.gene98135.t1 | AT5G17400 | 26.136 | 264 | 143 | 7 | 33 | 275 | 57 | 289 | 1.24e-18 | 84.7 |
| MS.gene98135.t1 | AT4G11440 | 25.503 | 298 | 186 | 8 | 1 | 287 | 331 | 603 | 1.61e-18 | 85.9 |
| MS.gene98135.t1 | AT4G11440 | 27.368 | 190 | 117 | 3 | 111 | 292 | 330 | 506 | 1.35e-11 | 65.5 |
| MS.gene98135.t1 | AT4G11440 | 25.503 | 298 | 186 | 8 | 1 | 287 | 331 | 603 | 1.61e-18 | 85.9 |
| MS.gene98135.t1 | AT4G11440 | 27.368 | 190 | 117 | 3 | 111 | 292 | 330 | 506 | 1.35e-11 | 65.5 |
| MS.gene98135.t1 | AT4G39460 | 25.850 | 294 | 178 | 8 | 1 | 291 | 59 | 315 | 2.47e-18 | 84.0 |
| MS.gene98135.t1 | AT4G39460 | 25.850 | 294 | 178 | 8 | 1 | 291 | 59 | 315 | 2.47e-18 | 84.0 |
| MS.gene98135.t1 | AT4G39460 | 25.850 | 294 | 178 | 8 | 1 | 291 | 59 | 315 | 2.47e-18 | 84.0 |
| MS.gene98135.t1 | AT1G07030 | 24.252 | 301 | 189 | 7 | 1 | 287 | 41 | 316 | 1.17e-17 | 82.0 |
| MS.gene98135.t1 | AT4G28390 | 24.183 | 306 | 166 | 8 | 3 | 275 | 86 | 358 | 6.19e-17 | 80.5 |
| MS.gene98135.t1 | AT4G28390 | 24.183 | 306 | 166 | 8 | 3 | 275 | 86 | 358 | 6.19e-17 | 80.5 |
| MS.gene98135.t1 | AT4G03115 | 25.694 | 288 | 180 | 9 | 8 | 286 | 46 | 308 | 1.03e-16 | 79.3 |
| MS.gene98135.t1 | AT4G03115 | 25.694 | 288 | 180 | 9 | 8 | 286 | 78 | 340 | 1.35e-16 | 79.3 |
| MS.gene98135.t1 | AT3G53940 | 27.074 | 229 | 140 | 6 | 1 | 217 | 74 | 287 | 1.84e-16 | 78.2 |
| MS.gene98135.t1 | AT3G53940 | 30.052 | 193 | 107 | 5 | 112 | 284 | 74 | 258 | 9.09e-14 | 70.5 |
| MS.gene98135.t1 | AT2G30160 | 23.684 | 304 | 190 | 8 | 1 | 287 | 43 | 321 | 2.61e-16 | 78.2 |
| MS.gene98135.t1 | AT1G25380 | 27.241 | 290 | 165 | 11 | 14 | 281 | 35 | 300 | 5.06e-16 | 77.8 |
| MS.gene98135.t1 | AT1G25380 | 27.241 | 290 | 165 | 11 | 14 | 281 | 35 | 300 | 5.06e-16 | 77.8 |
| MS.gene98135.t1 | AT5G56450 | 24.127 | 315 | 187 | 12 | 1 | 287 | 35 | 325 | 7.06e-16 | 77.0 |
| MS.gene98135.t1 | AT3G08580 | 22.712 | 295 | 185 | 6 | 3 | 275 | 87 | 360 | 2.82e-15 | 75.9 |
| MS.gene98135.t1 | AT3G08580 | 22.712 | 295 | 185 | 6 | 3 | 275 | 87 | 360 | 2.82e-15 | 75.9 |
| MS.gene98135.t1 | AT3G55640 | 27.511 | 229 | 139 | 7 | 1 | 217 | 39 | 252 | 3.10e-15 | 74.3 |
| MS.gene98135.t1 | AT3G55640 | 27.511 | 229 | 139 | 7 | 1 | 217 | 39 | 252 | 3.10e-15 | 74.3 |
| MS.gene98135.t1 | AT5G13490 | 23.232 | 297 | 185 | 6 | 1 | 275 | 89 | 364 | 3.54e-15 | 75.5 |
| MS.gene98135.t1 | AT5G13490 | 23.232 | 297 | 185 | 6 | 1 | 275 | 89 | 364 | 3.54e-15 | 75.5 |
| MS.gene98135.t1 | AT4G03115 | 26.217 | 267 | 164 | 8 | 28 | 286 | 4 | 245 | 5.28e-15 | 73.6 |
| MS.gene98135.t1 | AT2G35800 | 25.000 | 284 | 186 | 6 | 1 | 284 | 546 | 802 | 5.69e-15 | 75.5 |
| MS.gene98135.t1 | AT4G03115 | 26.172 | 256 | 160 | 7 | 35 | 286 | 7 | 237 | 6.66e-15 | 73.2 |
| MS.gene98135.t1 | AT5G42130 | 26.280 | 293 | 170 | 9 | 9 | 284 | 127 | 390 | 4.44e-13 | 69.3 |
| MS.gene98135.t1 | AT5G46800 | 23.548 | 310 | 193 | 10 | 2 | 287 | 10 | 299 | 1.15e-12 | 67.4 |
| MS.gene98135.t1 | AT5G46800 | 23.548 | 310 | 193 | 10 | 2 | 287 | 10 | 299 | 1.15e-12 | 67.4 |
| MS.gene98135.t1 | AT5G46800 | 23.548 | 310 | 193 | 10 | 2 | 287 | 10 | 299 | 1.15e-12 | 67.4 |
| MS.gene98135.t1 | AT2G17270 | 23.311 | 296 | 184 | 8 | 1 | 284 | 23 | 287 | 3.48e-12 | 66.2 |
| MS.gene98135.t1 | AT5G15640 | 27.174 | 184 | 126 | 5 | 112 | 287 | 29 | 212 | 5.38e-12 | 65.9 |
| MS.gene98135.t1 | AT5G15640 | 27.174 | 184 | 126 | 5 | 112 | 287 | 22 | 205 | 5.62e-12 | 65.5 |
| MS.gene98135.t1 | AT2G39970 | 22.654 | 309 | 179 | 11 | 16 | 281 | 24 | 315 | 1.19e-11 | 64.7 |
| MS.gene98135.t1 | AT1G79900 | 29.167 | 168 | 96 | 4 | 1 | 165 | 111 | 258 | 3.91e-11 | 63.2 |
Find 90 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGAAATATACCCTAATT+TGG | 0.144885 | 4.1:-89236031 | MS.gene98135:CDS |
| CTAATTGCAGCGCCCAAATT+AGG | 0.183331 | 4.1:+89236018 | None:intergenic |
| TAAAGACAAGCTCAAATTAA+TGG | 0.263095 | 4.1:+89236798 | None:intergenic |
| TAGATACCTTCAAAACTTCT+AGG | 0.264996 | 4.1:+89236707 | None:intergenic |
| CCCAAATTAGGGTATATTTC+AGG | 0.273254 | 4.1:+89236030 | None:intergenic |
| TTGGGGTGCAAGCTGTTTAA+AGG | 0.279423 | 4.1:-89235182 | MS.gene98135:CDS |
| CGTCCGGAGATGCTTATAAT+TGG | 0.312484 | 4.1:-89235844 | MS.gene98135:CDS |
| ATTTCACCAACTGCTGTGGC+TGG | 0.317329 | 4.1:-89236769 | MS.gene98135:CDS |
| ATTTGAGCTTGTCTTTATCT+TGG | 0.318265 | 4.1:-89236792 | MS.gene98135:CDS |
| TATCGCAGGTAGTTTCATTC+AGG | 0.321659 | 4.1:-89236992 | MS.gene98135:CDS |
| CCAACACAAGCCATTGAGTT+TGG | 0.342313 | 4.1:-89236904 | MS.gene98135:CDS |
| CTTATAATTGGAGCTCTATC+AGG | 0.362802 | 4.1:-89235832 | MS.gene98135:intron |
| TCATCCCTATTAAGACTATA+AGG | 0.364923 | 4.1:+89235084 | None:intergenic |
| TTTATGAGCGGCGCCCTAGC+TGG | 0.370801 | 4.1:-89237621 | MS.gene98135:CDS |
| TAATTGCAGCGCCCAAATTA+GGG | 0.384769 | 4.1:+89236019 | None:intergenic |
| ACTATAAGGAAATACCCTTC+TGG | 0.392352 | 4.1:+89235098 | None:intergenic |
| GACAATGCTGCTGCCATGTT+TGG | 0.394490 | 4.1:+89235247 | None:intergenic |
| ATTAGAAATATTTATAAAGA+TGG | 0.401453 | 4.1:-89236000 | MS.gene98135:CDS |
| TGGCATCACTGCAAGAGAAA+TGG | 0.402783 | 4.1:-89236855 | MS.gene98135:CDS |
| TTTCACCAACTGCTGTGGCT+GGG | 0.411268 | 4.1:-89236768 | MS.gene98135:CDS |
| TACATTTGAGTGGACAAAAC+GGG | 0.415213 | 4.1:-89236881 | MS.gene98135:CDS |
| CCTGAAATATACCCTAATTT+GGG | 0.418978 | 4.1:-89236030 | MS.gene98135:CDS |
| GTCATACATGAAATAATAAC+AGG | 0.422261 | 4.1:+89235915 | None:intergenic |
| GCTGTGGCTGGGGCAGCTGC+AGG | 0.422597 | 4.1:-89236757 | MS.gene98135:CDS |
| CATTCAGGTTGTAGATCAGC+AGG | 0.429106 | 4.1:-89236977 | MS.gene98135:CDS |
| GAAGGGTCTATACAGAGGTT+GGG | 0.435857 | 4.1:-89235200 | MS.gene98135:CDS |
| ATGGAACCTATCTGCAACTT+AGG | 0.439878 | 4.1:+89236817 | None:intergenic |
| TACAATTAGCTTTCCATTGG+AGG | 0.442855 | 4.1:-89235317 | MS.gene98135:CDS |
| TTCACCAACTGCTGTGGCTG+GGG | 0.443239 | 4.1:-89236767 | MS.gene98135:CDS |
| GGTTTATCACCTACTCTAGT+TGG | 0.445522 | 4.1:-89235955 | MS.gene98135:CDS |
| TTGCTCCTCTTGAAACCATC+AGG | 0.447108 | 4.1:-89237578 | MS.gene98135:intron |
| TAAGAAGTCTTTAAATCGTC+CGG | 0.453829 | 4.1:-89235860 | MS.gene98135:CDS |
| GGCATCACTGCAAGAGAAAT+GGG | 0.459269 | 4.1:-89236854 | MS.gene98135:CDS |
| TGAAGCATGGAAAGACATAC+TGG | 0.469349 | 4.1:-89235125 | MS.gene98135:CDS |
| AATGCTGCTGCCATGTTTGG+TGG | 0.471036 | 4.1:+89235250 | None:intergenic |
| AAATAATAACAGGTACTGTA+TGG | 0.474057 | 4.1:+89235925 | None:intergenic |
| AGATACCTTCAAAACTTCTA+GGG | 0.482964 | 4.1:+89236708 | None:intergenic |
| AGCAGGGATGGCAAGGATTG+TGG | 0.485061 | 4.1:-89236960 | MS.gene98135:CDS |
| GCTGCCCCAGCCACAGCAGT+TGG | 0.486547 | 4.1:+89236763 | None:intergenic |
| GCAGGGATGGCAAGGATTGT+GGG | 0.490569 | 4.1:-89236959 | MS.gene98135:CDS |
| TCGGAAGTTATTCGAGAAGA+AGG | 0.493790 | 4.1:-89235226 | MS.gene98135:CDS |
| ATTTATAAAGATGGTGGTAT+CGG | 0.495173 | 4.1:-89235991 | MS.gene98135:CDS |
| ACAAGAATGGTAGTTGGTGT+TGG | 0.501019 | 4.1:-89237024 | MS.gene98135:CDS |
| GAATCTCCTAAGTTGCAGAT+AGG | 0.503313 | 4.1:-89236823 | MS.gene98135:CDS |
| CAATGGAAAGCTAATTGTAC+TGG | 0.505502 | 4.1:+89235321 | None:intergenic |
| TTAAAGGTAATGCCATCCTC+TGG | 0.506130 | 4.1:-89235166 | MS.gene98135:CDS |
| CAAGAATGGTAGTTGGTGTT+GGG | 0.507620 | 4.1:-89237023 | MS.gene98135:CDS |
| CTTTAGTCATAGCACCAGCT+AGG | 0.513529 | 4.1:+89237607 | None:intergenic |
| AGAAATATTTATAAAGATGG+TGG | 0.518327 | 4.1:-89235997 | MS.gene98135:CDS |
| CGCTTTCTAGCTACCTCCAA+TGG | 0.519539 | 4.1:+89235304 | None:intergenic |
| TGAAGGGTCTATACAGAGGT+TGG | 0.525382 | 4.1:-89235201 | MS.gene98135:CDS |
| TTCAACATACAGGACAAGAA+TGG | 0.527565 | 4.1:-89237037 | MS.gene98135:intron |
| GCTCCAATTATAAGCATCTC+CGG | 0.531439 | 4.1:+89235841 | None:intergenic |
| CCATGCTTCATAAAACATCC+AGG | 0.533125 | 4.1:+89235138 | None:intergenic |
| AGCTAGAAAGCGTCTGATGG+TGG | 0.543913 | 4.1:-89235293 | MS.gene98135:CDS |
| CAGTACAATTAGCTTTCCAT+TGG | 0.546144 | 4.1:-89235320 | MS.gene98135:CDS |
| CTCAAATGTACCAAACTCAA+TGG | 0.547702 | 4.1:+89236894 | None:intergenic |
| ATGCTGCTGCCATGTTTGGT+GGG | 0.550249 | 4.1:+89235251 | None:intergenic |
| AAACATGGCAGCAGCATTGT+CGG | 0.551336 | 4.1:-89235245 | MS.gene98135:CDS |
| TTGGATTTCACCAACTGCTG+TGG | 0.551887 | 4.1:-89236773 | MS.gene98135:CDS |
| AAGGGTCTATACAGAGGTTG+GGG | 0.554321 | 4.1:-89235199 | MS.gene98135:CDS |
| TTTAGTCATAGCACCAGCTA+GGG | 0.554550 | 4.1:+89237608 | None:intergenic |
| AGACATACTGGTTGTCCAGA+AGG | 0.558329 | 4.1:-89235113 | MS.gene98135:CDS |
| AGGTAAGTGCCCACCAAACA+TGG | 0.561890 | 4.1:-89235260 | MS.gene98135:CDS |
| GTACATTTGAGTGGACAAAA+CGG | 0.562674 | 4.1:-89236882 | MS.gene98135:CDS |
| TTGAGTTTGGTACATTTGAG+TGG | 0.565737 | 4.1:-89236891 | MS.gene98135:CDS |
| TGCCATCCTCTGGAATCACC+TGG | 0.566309 | 4.1:-89235156 | MS.gene98135:CDS |
| TATTCGAGAAGAAGGTCTGA+AGG | 0.569713 | 4.1:-89235218 | MS.gene98135:CDS |
| CCTTCAAAACTTCTAGGGGA+TGG | 0.570273 | 4.1:+89236713 | None:intergenic |
| GGATGGCAAGGATTGTGGGC+TGG | 0.572479 | 4.1:-89236955 | MS.gene98135:CDS |
| GACATACTGGTTGTCCAGAA+GGG | 0.578877 | 4.1:-89235112 | MS.gene98135:CDS |
| GCTAGAAAGCGTCTGATGGT+GGG | 0.582168 | 4.1:-89235292 | MS.gene98135:CDS |
| ATCCAGGTGATTCCAGAGGA+TGG | 0.584233 | 4.1:+89235154 | None:intergenic |
| GTAGATCAGCAGGGATGGCA+AGG | 0.584481 | 4.1:-89236967 | MS.gene98135:CDS |
| AGGTTGTAGATCAGCAGGGA+TGG | 0.590078 | 4.1:-89236972 | MS.gene98135:CDS |
| TACAGGACAAGAATGGTAGT+TGG | 0.591878 | 4.1:-89237030 | MS.gene98135:intron |
| GGAAGCATGCCAACTAGAGT+AGG | 0.599614 | 4.1:+89235946 | None:intergenic |
| CCAAACTCAATGGCTTGTGT+TGG | 0.604946 | 4.1:+89236904 | None:intergenic |
| GGTAGCTAGAAAGCGTCTGA+TGG | 0.619276 | 4.1:-89235296 | MS.gene98135:CDS |
| CTGATGGTGGGAGCATTGCA+AGG | 0.621069 | 4.1:-89235280 | MS.gene98135:CDS |
| ACATTTGAGTGGACAAAACG+GGG | 0.621203 | 4.1:-89236880 | MS.gene98135:CDS |
| GATACCTTCAAAACTTCTAG+GGG | 0.646053 | 4.1:+89236709 | None:intergenic |
| ATTCAGGTTGTAGATCAGCA+GGG | 0.647012 | 4.1:-89236976 | MS.gene98135:CDS |
| GAATACCTGATGGTTTCAAG+AGG | 0.653503 | 4.1:+89237573 | None:intergenic |
| ATTCGAGAAGAAGGTCTGAA+GGG | 0.664756 | 4.1:-89235217 | MS.gene98135:CDS |
| GTTGGGTCGAGAAATATCGC+AGG | 0.665608 | 4.1:-89237006 | MS.gene98135:CDS |
| GAAGTTCGTGAGTTTATGAG+CGG | 0.674510 | 4.1:-89237633 | None:intergenic |
| AAACATCCAGGTGATTCCAG+AGG | 0.681339 | 4.1:+89235150 | None:intergenic |
| GGTCTGAAGGGTCTATACAG+AGG | 0.720789 | 4.1:-89235205 | MS.gene98135:CDS |
| CATTTGAGTGGACAAAACGG+GGG | 0.754817 | 4.1:-89236879 | MS.gene98135:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGAAATATTTATAAAGA+TGG | - | chr4.1:89236717-89236736 | MS.gene98135:CDS | 10.0% |
| !! | AAAGTGATAATAAATACAAA+AGG | + | chr4.1:89235430-89235449 | None:intergenic | 15.0% |
| !! | AAATAATTAATGAGAGATAA+GGG | - | chr4.1:89236416-89236435 | MS.gene98135:intron | 15.0% |
| !! | AAGTGATAATAAATACAAAA+GGG | + | chr4.1:89235429-89235448 | None:intergenic | 15.0% |
| !! | TAAATTGTATAAATTGTCTT+TGG | - | chr4.1:89236078-89236097 | MS.gene98135:intron | 15.0% |
| !!! | ATTTAAAGACTTCTTATTTT+TGG | + | chr4.1:89236853-89236872 | None:intergenic | 15.0% |
| !!! | CTTGACAATTTTTTTTTAAT+CGG | + | chr4.1:89237148-89237167 | None:intergenic | 15.0% |
| !! | AAATATTTCATGCCATTATA+TGG | + | chr4.1:89236995-89237014 | None:intergenic | 20.0% |
| !! | AAATGATTAATGAGAGATAA+GGG | - | chr4.1:89236442-89236461 | MS.gene98135:intron | 20.0% |
| !! | AATGATGTAAAATCTAAGTA+AGG | - | chr4.1:89235588-89235607 | MS.gene98135:intron | 20.0% |
| !! | ACATTATTATTTCAACATAC+AGG | - | chr4.1:89235670-89235689 | MS.gene98135:intron | 20.0% |
| !! | ACTTAAAACGACATTTATTA+AGG | - | chr4.1:89236485-89236504 | MS.gene98135:intron | 20.0% |
| !! | AGAAATATTTATAAAGATGG+TGG | - | chr4.1:89236720-89236739 | MS.gene98135:CDS | 20.0% |
| !! | AGTGATAATAAATACAAAAG+GGG | + | chr4.1:89235428-89235447 | None:intergenic | 20.0% |
| !! | ATTAGATATACGATTAAAAC+CGG | + | chr4.1:89237176-89237195 | None:intergenic | 20.0% |
| !! | CAAATAATTAATGAGAGATA+AGG | - | chr4.1:89236415-89236434 | MS.gene98135:intron | 20.0% |
| !! | CGATTAAAAAAAAATTGTCA+AGG | - | chr4.1:89237146-89237165 | MS.gene98135:intron | 20.0% |
| !! | TAACCGGAAAAAAATAAAAA+CGG | + | chr4.1:89236147-89236166 | None:intergenic | 20.0% |
| !! | TTAATCGTATATCTAATGAA+CGG | - | chr4.1:89237179-89237198 | MS.gene98135:intron | 20.0% |
| !! | TTATTCTATAGTGAAACAAT+CGG | - | chr4.1:89236303-89236322 | MS.gene98135:intron | 20.0% |
| !! | TTGTTAATTGTGAAAAATTG+TGG | + | chr4.1:89235381-89235400 | None:intergenic | 20.0% |
| !!! | TACAAAGTTTTGTCAAATAA+TGG | - | chr4.1:89235308-89235327 | MS.gene98135:CDS | 20.0% |
| !!! | TTTTTAATCCTAATTCTCTT+TGG | - | chr4.1:89236632-89236651 | MS.gene98135:intron | 20.0% |
| ! | AAACGACATTTATTAAGGAA+CGG | - | chr4.1:89236490-89236509 | MS.gene98135:intron | 25.0% |
| ! | ATACGTCATTAATTGTACTT+TGG | - | chr4.1:89236334-89236353 | MS.gene98135:intron | 25.0% |
| ! | ATATGCATAAAGAGAAACTT+TGG | + | chr4.1:89237245-89237264 | None:intergenic | 25.0% |
| ! | ATATTGTAGGAACCATATAA+TGG | - | chr4.1:89236980-89236999 | MS.gene98135:CDS | 25.0% |
| ! | ATTAAGGTCCTAAAGAAAAA+GGG | - | chr4.1:89236251-89236270 | MS.gene98135:intron | 25.0% |
| ! | CATAGATATGAACCTTAAAA+AGG | + | chr4.1:89237287-89237306 | None:intergenic | 25.0% |
| ! | GAAATGATTAATGAGAGATA+AGG | - | chr4.1:89236441-89236460 | MS.gene98135:intron | 25.0% |
| ! | GTCATACATGAAATAATAAC+AGG | + | chr4.1:89236805-89236824 | None:intergenic | 25.0% |
| ! | TAAAGACAAGCTCAAATTAA+TGG | + | chr4.1:89235922-89235941 | None:intergenic | 25.0% |
| ! | TAACAAATCCAAAGAGAATT+AGG | + | chr4.1:89236643-89236662 | None:intergenic | 25.0% |
| ! | TATTCTATAGTGAAACAATC+GGG | - | chr4.1:89236304-89236323 | MS.gene98135:intron | 25.0% |
| ! | TGGGTTATAAAAACAGTAAT+AGG | + | chr4.1:89237045-89237064 | None:intergenic | 25.0% |
| !! | AAATAATAACAGGTACTGTA+TGG | + | chr4.1:89236795-89236814 | None:intergenic | 25.0% |
| !! | ATTTATAAAGATGGTGGTAT+CGG | - | chr4.1:89236726-89236745 | MS.gene98135:CDS | 25.0% |
| !!! | ATGCCGTTTTTATTTTTTTC+CGG | - | chr4.1:89236141-89236160 | MS.gene98135:intron | 25.0% |
| !!! | CTTGGTCATTATTTTGTTTT+TGG | + | chr4.1:89236570-89236589 | None:intergenic | 25.0% |
| !!! | TGTCGTTTTAAGTATTTATG+TGG | + | chr4.1:89236478-89236497 | None:intergenic | 25.0% |
| !!! | TTACTGTTTTTATAACCCAA+AGG | - | chr4.1:89237046-89237065 | MS.gene98135:intron | 25.0% |
| !!! | TTATTTTTTTCCGGTTATCA+AGG | - | chr4.1:89236150-89236169 | MS.gene98135:intron | 25.0% |
| !!! | TTGTTTTTGGTATGATGTTT+TGG | + | chr4.1:89236557-89236576 | None:intergenic | 25.0% |
| AAAAAATTGTCAAGGTGTAC+CGG | - | chr4.1:89237154-89237173 | MS.gene98135:intron | 30.0% | |
| AAAATACATTGCCAAGTACA+TGG | + | chr4.1:89237221-89237240 | None:intergenic | 30.0% | |
| AAAGAGAATACCATCAAAAC+TGG | + | chr4.1:89235466-89235485 | None:intergenic | 30.0% | |
| AATAAAAACGGCATACGTTA+AGG | + | chr4.1:89236135-89236154 | None:intergenic | 30.0% | |
| ACATTTATTAAGGAACGGAA+CGG | - | chr4.1:89236495-89236514 | MS.gene98135:intron | 30.0% | |
| AGATACCTTCAAAACTTCTA+GGG | + | chr4.1:89236012-89236031 | None:intergenic | 30.0% | |
| ATTTGAGCTTGTCTTTATCT+TGG | - | chr4.1:89235925-89235944 | MS.gene98135:CDS | 30.0% | |
| CATTAAGGTCCTAAAGAAAA+AGG | - | chr4.1:89236250-89236269 | MS.gene98135:intron | 30.0% | |
| CCTGAAATATACCCTAATTT+GGG | - | chr4.1:89236687-89236706 | MS.gene98135:intron | 30.0% | |
| GAATAGAATAGAATACCTGA+TGG | + | chr4.1:89235157-89235176 | None:intergenic | 30.0% | |
| GATAATAAATACAAAAGGGG+TGG | + | chr4.1:89235425-89235444 | None:intergenic | 30.0% | |
| TAAGAAGTCTTTAAATCGTC+CGG | - | chr4.1:89236857-89236876 | MS.gene98135:CDS | 30.0% | |
| TAATGAGGAGAGAGATTAAA+TGG | + | chr4.1:89236235-89236254 | None:intergenic | 30.0% | |
| TAGATACCTTCAAAACTTCT+AGG | + | chr4.1:89236013-89236032 | None:intergenic | 30.0% | |
| TATGGTTCCTACAATATGAT+CGG | + | chr4.1:89236977-89236996 | None:intergenic | 30.0% | |
| TCCTGAAATATACCCTAATT+TGG | - | chr4.1:89236686-89236705 | MS.gene98135:intron | 30.0% | |
| TTGTACTAACTAGTATATCG+CGG | + | chr4.1:89235293-89235312 | None:intergenic | 30.0% | |
| TTTAATCTCTCTCCTCATTA+AGG | - | chr4.1:89236235-89236254 | MS.gene98135:intron | 30.0% | |
| ! | GGCAATAAAATAAGCTTTTG+AGG | - | chr4.1:89236355-89236374 | MS.gene98135:intron | 30.0% |
| ! | GTTAACATCCCTTTTTCTTT+AGG | + | chr4.1:89236262-89236281 | None:intergenic | 30.0% |
| ! | TGCAATTTGTGTCCTTTTTA+AGG | - | chr4.1:89237272-89237291 | MS.gene98135:intron | 30.0% |
| !! | TAAAATAAGCTTTTGAGGAG+TGG | - | chr4.1:89236360-89236379 | MS.gene98135:intron | 30.0% |
| !!! | AAGACTTCTTATTTTTGGTC+AGG | + | chr4.1:89236848-89236867 | None:intergenic | 30.0% |
| !!! | TTTTCTTTAGGACCTTAATG+AGG | + | chr4.1:89236250-89236269 | None:intergenic | 30.0% |
| AGAATACCATCAAAACTGGA+GGG | + | chr4.1:89235462-89235481 | None:intergenic | 35.0% | |
| AGAGATTAAATGGATGAAGC+GGG | + | chr4.1:89236225-89236244 | None:intergenic | 35.0% | |
| CAATGGAAAGCTAATTGTAC+TGG | + | chr4.1:89237399-89237418 | None:intergenic | 35.0% | |
| CACAGCGATACAAATTGATT+CGG | - | chr4.1:89237336-89237355 | MS.gene98135:intron | 35.0% | |
| CCCAAATTAGGGTATATTTC+AGG | + | chr4.1:89236690-89236709 | None:intergenic | 35.0% | |
| CTCAAATGTACCAAACTCAA+TGG | + | chr4.1:89235826-89235845 | None:intergenic | 35.0% | |
| CTTATAATTGGAGCTCTATC+AGG | - | chr4.1:89236885-89236904 | MS.gene98135:CDS | 35.0% | |
| GAGAGATTAAATGGATGAAG+CGG | + | chr4.1:89236226-89236245 | None:intergenic | 35.0% | |
| GATACCTTCAAAACTTCTAG+GGG | + | chr4.1:89236011-89236030 | None:intergenic | 35.0% | |
| GTACATTTGAGTGGACAAAA+CGG | - | chr4.1:89235835-89235854 | MS.gene98135:CDS | 35.0% | |
| GTATATCTAATGAACGGAGA+CGG | - | chr4.1:89237185-89237204 | MS.gene98135:intron | 35.0% | |
| TACATTTGAGTGGACAAAAC+GGG | - | chr4.1:89235836-89235855 | MS.gene98135:CDS | 35.0% | |
| TAGTTTCTATGAGACAACAC+TGG | + | chr4.1:89235209-89235228 | None:intergenic | 35.0% | |
| TATATCTAATGAACGGAGAC+GGG | - | chr4.1:89237186-89237205 | MS.gene98135:intron | 35.0% | |
| TATGTAACTCTGTAGCACAT+CGG | - | chr4.1:89235343-89235362 | MS.gene98135:intron | 35.0% | |
| TTCAACATACAGGACAAGAA+TGG | - | chr4.1:89235680-89235699 | MS.gene98135:intron | 35.0% | |
| TTGAGTTTGGTACATTTGAG+TGG | - | chr4.1:89235826-89235845 | MS.gene98135:intron | 35.0% | |
| ! | ACAATCTCATCCTTGATAAC+CGG | + | chr4.1:89236163-89236182 | None:intergenic | 35.0% |
| ! | ACAGCGATACAAATTGATTC+GGG | - | chr4.1:89237337-89237356 | MS.gene98135:intron | 35.0% |
| ! | TCTCTTTGTTTACAGCTCTT+TGG | - | chr4.1:89236926-89236945 | MS.gene98135:CDS | 35.0% |
| !! | CAGTACAATTAGCTTTCCAT+TGG | - | chr4.1:89237397-89237416 | MS.gene98135:intron | 35.0% |
| !! | CTCTTTGGATTTGTTATTCC+AGG | - | chr4.1:89236647-89236666 | MS.gene98135:intron | 35.0% |
| !! | TACAATTAGCTTTCCATTGG+AGG | - | chr4.1:89237400-89237419 | MS.gene98135:intron | 35.0% |
| !! | TGGATTTGTTATTCCAGGAT+CGG | - | chr4.1:89236652-89236671 | MS.gene98135:intron | 35.0% |
| AAACGGCATACGTTAAGGAA+CGG | + | chr4.1:89236130-89236149 | None:intergenic | 40.0% | |
| ACAAACTATGTCTCTGCCTT+TGG | + | chr4.1:89237065-89237084 | None:intergenic | 40.0% | |
| ACATTTGAGTGGACAAAACG+GGG | - | chr4.1:89235837-89235856 | MS.gene98135:CDS | 40.0% | |
| ACTAGTATATCGCGGAACAA+TGG | + | chr4.1:89235285-89235304 | None:intergenic | 40.0% | |
| AGTTCAACATCTTCGTGTCT+TGG | + | chr4.1:89236588-89236607 | None:intergenic | 40.0% | |
| ATGATCGGTTGATCGTGTAA+AGG | + | chr4.1:89236962-89236981 | None:intergenic | 40.0% | |
| ATGGAACCTATCTGCAACTT+AGG | + | chr4.1:89235903-89235922 | None:intergenic | 40.0% | |
| ATTCGAGAAGAAGGTCTGAA+GGG | - | chr4.1:89237500-89237519 | MS.gene98135:intron | 40.0% | |
| CAAACTATGTCTCTGCCTTT+GGG | + | chr4.1:89237064-89237083 | None:intergenic | 40.0% | |
| CAGTTGTCAACAGTAGATAG+TGG | + | chr4.1:89235538-89235557 | None:intergenic | 40.0% | |
| CCATGCTTCATAAAACATCC+AGG | + | chr4.1:89237582-89237601 | None:intergenic | 40.0% | |
| CGATCAACCGATCATATTGT+AGG | - | chr4.1:89236967-89236986 | MS.gene98135:CDS | 40.0% | |
| GAATACCATCAAAACTGGAG+GGG | + | chr4.1:89235461-89235480 | None:intergenic | 40.0% | |
| GAATACCTGATGGTTTCAAG+AGG | + | chr4.1:89235147-89235166 | None:intergenic | 40.0% | |
| GAATCTCCTAAGTTGCAGAT+AGG | - | chr4.1:89235894-89235913 | MS.gene98135:CDS | 40.0% | |
| GACTTATAGTTAACCGATCC+TGG | + | chr4.1:89236668-89236687 | None:intergenic | 40.0% | |
| GAGAATACCATCAAAACTGG+AGG | + | chr4.1:89235463-89235482 | None:intergenic | 40.0% | |
| GCTCCAATTATAAGCATCTC+CGG | + | chr4.1:89236879-89236898 | None:intergenic | 40.0% | |
| GGATAGTGATACCATGTACT+TGG | - | chr4.1:89237207-89237226 | MS.gene98135:intron | 40.0% | |
| GGTTTATCACCTACTCTAGT+TGG | - | chr4.1:89236762-89236781 | MS.gene98135:CDS | 40.0% | |
| GTCAAATAATGGCTATTGCG+CGG | - | chr4.1:89235319-89235338 | MS.gene98135:CDS | 40.0% | |
| TAATTGCAGCGCCCAAATTA+GGG | + | chr4.1:89236701-89236720 | None:intergenic | 40.0% | |
| TACAAAAGGGGTGGTCAATA+AGG | + | chr4.1:89235416-89235435 | None:intergenic | 40.0% | |
| TACAGGACAAGAATGGTAGT+TGG | - | chr4.1:89235687-89235706 | MS.gene98135:intron | 40.0% | |
| TATCGCAGGTAGTTTCATTC+AGG | - | chr4.1:89235725-89235744 | MS.gene98135:intron | 40.0% | |
| TATTCGAGAAGAAGGTCTGA+AGG | - | chr4.1:89237499-89237518 | MS.gene98135:intron | 40.0% | |
| TCGGAAGTTATTCGAGAAGA+AGG | - | chr4.1:89237491-89237510 | MS.gene98135:intron | 40.0% | |
| TCTATGAGACAACACTGGTA+GGG | + | chr4.1:89235204-89235223 | None:intergenic | 40.0% | |
| TGAAGCATGGAAAGACATAC+TGG | - | chr4.1:89237592-89237611 | MS.gene98135:CDS | 40.0% | |
| TTAAAGGTAATGCCATCCTC+TGG | - | chr4.1:89237551-89237570 | MS.gene98135:intron | 40.0% | |
| TTATTAAGGAACGGAACGGA+CGG | - | chr4.1:89236499-89236518 | MS.gene98135:intron | 40.0% | |
| TTCTATGAGACAACACTGGT+AGG | + | chr4.1:89235205-89235224 | None:intergenic | 40.0% | |
| TTTAGTCATAGCACCAGCTA+GGG | + | chr4.1:89235112-89235131 | None:intergenic | 40.0% | |
| ! | ACAAGAATGGTAGTTGGTGT+TGG | - | chr4.1:89235693-89235712 | MS.gene98135:intron | 40.0% |
| ! | ATTGTACTGGCAGTAAAACC+TGG | + | chr4.1:89237386-89237405 | None:intergenic | 40.0% |
| ! | CAAGAATGGTAGTTGGTGTT+GGG | - | chr4.1:89235694-89235713 | MS.gene98135:intron | 40.0% |
| ! | CCTGGATGTTTTATGAAGCA+TGG | - | chr4.1:89237579-89237598 | MS.gene98135:CDS | 40.0% |
| ! | TTGTACTGGCAGTAAAACCT+GGG | + | chr4.1:89237385-89237404 | None:intergenic | 40.0% |
| !! | ATTCAGGTTGTAGATCAGCA+GGG | - | chr4.1:89235741-89235760 | MS.gene98135:intron | 40.0% |
| !!! | AGAATTGTTTTTGCACACCC+AGG | - | chr4.1:89237365-89237384 | MS.gene98135:intron | 40.0% |
| AAACATCCAGGTGATTCCAG+AGG | + | chr4.1:89237570-89237589 | None:intergenic | 45.0% | |
| AAACATGGCAGCAGCATTGT+CGG | - | chr4.1:89237472-89237491 | MS.gene98135:intron | 45.0% | |
| AAAGGGGTGGTCAATAAGGA+AGG | + | chr4.1:89235412-89235431 | None:intergenic | 45.0% | |
| AAGGGGTGGTCAATAAGGAA+GGG | + | chr4.1:89235411-89235430 | None:intergenic | 45.0% | |
| AAGGGTCTATACAGAGGTTG+GGG | - | chr4.1:89237518-89237537 | MS.gene98135:intron | 45.0% | |
| AAGTGGACGATGAGGGTAAT+AGG | + | chr4.1:89236200-89236219 | None:intergenic | 45.0% | |
| AATGGATGAAGCGGGAAAAG+TGG | + | chr4.1:89236217-89236236 | None:intergenic | 45.0% | |
| ACGCTATAGCACTATAGCGT+AGG | - | chr4.1:89235488-89235507 | MS.gene98135:intron | 45.0% | |
| CATTTGAGTGGACAAAACGG+GGG | - | chr4.1:89235838-89235857 | MS.gene98135:CDS | 45.0% | |
| CCAACACAAGCCATTGAGTT+TGG | - | chr4.1:89235813-89235832 | MS.gene98135:intron | 45.0% | |
| CGTCCGGAGATGCTTATAAT+TGG | - | chr4.1:89236873-89236892 | MS.gene98135:CDS | 45.0% | |
| CTAATTGCAGCGCCCAAATT+AGG | + | chr4.1:89236702-89236721 | None:intergenic | 45.0% | |
| CTATGAGACAACACTGGTAG+GGG | + | chr4.1:89235203-89235222 | None:intergenic | 45.0% | |
| CTTTAGTCATAGCACCAGCT+AGG | + | chr4.1:89235113-89235132 | None:intergenic | 45.0% | |
| GAAGGGTCTATACAGAGGTT+GGG | - | chr4.1:89237517-89237536 | MS.gene98135:intron | 45.0% | |
| GGCATCACTGCAAGAGAAAT+GGG | - | chr4.1:89235863-89235882 | MS.gene98135:CDS | 45.0% | |
| TGAAGGGTCTATACAGAGGT+TGG | - | chr4.1:89237516-89237535 | MS.gene98135:intron | 45.0% | |
| TGGCATCACTGCAAGAGAAA+TGG | - | chr4.1:89235862-89235881 | MS.gene98135:CDS | 45.0% | |
| TTGCTCCTCTTGAAACCATC+AGG | - | chr4.1:89235139-89235158 | MS.gene98135:CDS | 45.0% | |
| TTGGATTTCACCAACTGCTG+TGG | - | chr4.1:89235944-89235963 | MS.gene98135:CDS | 45.0% | |
| TTGGGGTGCAAGCTGTTTAA+AGG | - | chr4.1:89237535-89237554 | MS.gene98135:intron | 45.0% | |
| ! | AGACATACTGGTTGTCCAGA+AGG | - | chr4.1:89237604-89237623 | MS.gene98135:CDS | 45.0% |
| ! | CCAAACTCAATGGCTTGTGT+TGG | + | chr4.1:89235816-89235835 | None:intergenic | 45.0% |
| ! | CCTTCAAAACTTCTAGGGGA+TGG | + | chr4.1:89236007-89236026 | None:intergenic | 45.0% |
| ! | GACATACTGGTTGTCCAGAA+GGG | - | chr4.1:89237605-89237624 | MS.gene98135:CDS | 45.0% |
| ! | GGCAGAGACATAGTTTGTCA+AGG | - | chr4.1:89237067-89237086 | MS.gene98135:intron | 45.0% |
| !! | CATTCAGGTTGTAGATCAGC+AGG | - | chr4.1:89235740-89235759 | MS.gene98135:intron | 45.0% |
| !! | CCATCCCCTAGAAGTTTTGA+AGG | - | chr4.1:89236004-89236023 | MS.gene98135:CDS | 45.0% |
| AATGCTGCTGCCATGTTTGG+TGG | + | chr4.1:89237470-89237489 | None:intergenic | 50.0% | |
| AGGTAAGTGCCCACCAAACA+TGG | - | chr4.1:89237457-89237476 | MS.gene98135:intron | 50.0% | |
| AGGTTGTAGATCAGCAGGGA+TGG | - | chr4.1:89235745-89235764 | MS.gene98135:intron | 50.0% | |
| ATCCAGGTGATTCCAGAGGA+TGG | + | chr4.1:89237566-89237585 | None:intergenic | 50.0% | |
| ATGCTGCTGCCATGTTTGGT+GGG | + | chr4.1:89237469-89237488 | None:intergenic | 50.0% | |
| ATTTCACCAACTGCTGTGGC+TGG | - | chr4.1:89235948-89235967 | MS.gene98135:CDS | 50.0% | |
| GACAATGCTGCTGCCATGTT+TGG | + | chr4.1:89237473-89237492 | None:intergenic | 50.0% | |
| GGCATACGTTAAGGAACGGA+GGG | + | chr4.1:89236126-89236145 | None:intergenic | 50.0% | |
| GGTCTGAAGGGTCTATACAG+AGG | - | chr4.1:89237512-89237531 | MS.gene98135:intron | 50.0% | |
| GTTGGGTCGAGAAATATCGC+AGG | - | chr4.1:89235711-89235730 | MS.gene98135:intron | 50.0% | |
| TTTCACCAACTGCTGTGGCT+GGG | - | chr4.1:89235949-89235968 | MS.gene98135:CDS | 50.0% | |
| ! | GGAAGCATGCCAACTAGAGT+AGG | + | chr4.1:89236774-89236793 | None:intergenic | 50.0% |
| !! | AGCTAGAAAGCGTCTGATGG+TGG | - | chr4.1:89237424-89237443 | MS.gene98135:intron | 50.0% |
| !! | CGCTTTCTAGCTACCTCCAA+TGG | + | chr4.1:89237416-89237435 | None:intergenic | 50.0% |
| !! | GCTAGAAAGCGTCTGATGGT+GGG | - | chr4.1:89237425-89237444 | MS.gene98135:intron | 50.0% |
| !! | GGTAGCTAGAAAGCGTCTGA+TGG | - | chr4.1:89237421-89237440 | MS.gene98135:intron | 50.0% |
| !! | TGCTACCCCTCCAGTTTTGA+TGG | - | chr4.1:89235453-89235472 | MS.gene98135:intron | 50.0% |
| !!! | GGTATCGGCGCTTTTTATGC+TGG | - | chr4.1:89236741-89236760 | MS.gene98135:CDS | 50.0% |
| AGCAGGGATGGCAAGGATTG+TGG | - | chr4.1:89235757-89235776 | MS.gene98135:intron | 55.0% | |
| AGCGGGAAAAGTGGACGATG+AGG | + | chr4.1:89236208-89236227 | None:intergenic | 55.0% | |
| CGGCATACGTTAAGGAACGG+AGG | + | chr4.1:89236127-89236146 | None:intergenic | 55.0% | |
| GCAGGGATGGCAAGGATTGT+GGG | - | chr4.1:89235758-89235777 | MS.gene98135:intron | 55.0% | |
| GCGGGAAAAGTGGACGATGA+GGG | + | chr4.1:89236207-89236226 | None:intergenic | 55.0% | |
| GTAGATCAGCAGGGATGGCA+AGG | - | chr4.1:89235750-89235769 | MS.gene98135:intron | 55.0% | |
| TGAGTGGACAAAACGGGGGA+TGG | - | chr4.1:89235842-89235861 | MS.gene98135:CDS | 55.0% | |
| TTCACCAACTGCTGTGGCTG+GGG | - | chr4.1:89235950-89235969 | MS.gene98135:CDS | 55.0% | |
| ! | AGCTTTTGCGCGTCTTGTGC+AGG | - | chr4.1:89237101-89237120 | MS.gene98135:intron | 55.0% |
| !! | CTGATGGTGGGAGCATTGCA+AGG | - | chr4.1:89237437-89237456 | MS.gene98135:intron | 55.0% |
| !! | TGCCATCCTCTGGAATCACC+TGG | - | chr4.1:89237561-89237580 | MS.gene98135:intron | 55.0% |
| GGATGGCAAGGATTGTGGGC+TGG | - | chr4.1:89235762-89235781 | MS.gene98135:intron | 60.0% | |
| GCTGCCCCAGCCACAGCAGT+TGG | + | chr4.1:89235957-89235976 | None:intergenic | 70.0% | |
| GCTGTGGCTGGGGCAGCTGC+AGG | - | chr4.1:89235960-89235979 | MS.gene98135:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 89235099 | 89237640 | 89235099 | ID=MS.gene98135 |
| chr4.1 | mRNA | 89235099 | 89237640 | 89235099 | ID=MS.gene98135.t1;Parent=MS.gene98135 |
| chr4.1 | exon | 89237579 | 89237640 | 89237579 | ID=MS.gene98135.t1.exon1;Parent=MS.gene98135.t1 |
| chr4.1 | CDS | 89237579 | 89237640 | 89237579 | ID=cds.MS.gene98135.t1;Parent=MS.gene98135.t1 |
| chr4.1 | exon | 89236714 | 89237047 | 89236714 | ID=MS.gene98135.t1.exon2;Parent=MS.gene98135.t1 |
| chr4.1 | CDS | 89236714 | 89237047 | 89236714 | ID=cds.MS.gene98135.t1;Parent=MS.gene98135.t1 |
| chr4.1 | exon | 89235833 | 89236070 | 89235833 | ID=MS.gene98135.t1.exon3;Parent=MS.gene98135.t1 |
| chr4.1 | CDS | 89235833 | 89236070 | 89235833 | ID=cds.MS.gene98135.t1;Parent=MS.gene98135.t1 |
| chr4.1 | exon | 89235099 | 89235352 | 89235099 | ID=MS.gene98135.t1.exon4;Parent=MS.gene98135.t1 |
| chr4.1 | CDS | 89235099 | 89235352 | 89235099 | ID=cds.MS.gene98135.t1;Parent=MS.gene98135.t1 |
| Gene Sequence |
| Protein sequence |
