Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32489.t1 | XP_003616506.2 | 100 | 327 | 0 | 0 | 1 | 327 | 1 | 327 | 2.50E-182 | 647.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32489.t1 | Q54MZ4 | 41.1 | 299 | 166 | 4 | 25 | 321 | 133 | 423 | 9.7e-58 | 225.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32489.t1 | G7K211 | 100.0 | 327 | 0 | 0 | 1 | 327 | 1 | 327 | 1.8e-182 | 647.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057199 | MS.gene32489 | 0.807634 | 4.59E-50 | -1.69E-46 |
| MS.gene058503 | MS.gene32489 | 0.865331 | 6.38E-65 | -1.69E-46 |
| MS.gene058505 | MS.gene32489 | 0.846471 | 2.13E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32489 | MS.gene98135 | PPI |
| MS.gene32489 | MS.gene95300 | PPI |
| MS.gene66338 | MS.gene32489 | PPI |
| MS.gene064041 | MS.gene32489 | PPI |
| MS.gene79746 | MS.gene32489 | PPI |
| MS.gene030289 | MS.gene32489 | PPI |
| MS.gene32489 | MS.gene015005 | PPI |
| MS.gene32489 | MS.gene59586 | PPI |
| MS.gene064043 | MS.gene32489 | PPI |
| MS.gene32489 | MS.gene034290 | PPI |
| MS.gene32489 | MS.gene046369 | PPI |
| MS.gene32489 | MS.gene32803 | PPI |
| MS.gene32489 | MS.gene052972 | PPI |
| MS.gene064047 | MS.gene32489 | PPI |
| MS.gene37414 | MS.gene32489 | PPI |
| MS.gene074631 | MS.gene32489 | PPI |
| MS.gene75068 | MS.gene32489 | PPI |
| MS.gene32489 | MS.gene066511 | PPI |
| MS.gene32489 | MS.gene074632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32489.t1 | MTR_5g081150 | 100.000 | 327 | 0 | 0 | 1 | 327 | 1 | 327 | 0.0 | 671 |
| MS.gene32489.t1 | MTR_5g081150 | 97.276 | 257 | 7 | 0 | 1 | 257 | 1 | 257 | 0.0 | 509 |
| MS.gene32489.t1 | MTR_5g081150 | 100.000 | 248 | 0 | 0 | 1 | 248 | 1 | 248 | 0.0 | 508 |
| MS.gene32489.t1 | MTR_7g064980 | 70.625 | 320 | 87 | 3 | 7 | 323 | 1 | 316 | 5.44e-162 | 454 |
| MS.gene32489.t1 | MTR_7g064980 | 28.571 | 203 | 121 | 6 | 33 | 227 | 133 | 319 | 2.56e-13 | 70.1 |
| MS.gene32489.t1 | MTR_5g009500 | 38.318 | 321 | 170 | 7 | 22 | 321 | 25 | 338 | 8.01e-63 | 203 |
| MS.gene32489.t1 | MTR_8g027975 | 35.276 | 326 | 187 | 6 | 16 | 321 | 32 | 353 | 1.29e-60 | 198 |
| MS.gene32489.t1 | MTR_6g091800 | 33.333 | 303 | 174 | 5 | 33 | 321 | 18 | 306 | 1.64e-48 | 165 |
| MS.gene32489.t1 | MTR_6g091800 | 31.472 | 197 | 119 | 5 | 140 | 323 | 18 | 211 | 9.40e-19 | 85.5 |
| MS.gene32489.t1 | MTR_6g091800 | 28.070 | 228 | 139 | 7 | 16 | 229 | 97 | 313 | 9.81e-17 | 79.7 |
| MS.gene32489.t1 | MTR_3g104600 | 33.228 | 316 | 168 | 8 | 31 | 321 | 32 | 329 | 1.02e-47 | 164 |
| MS.gene32489.t1 | MTR_3g104600 | 30.841 | 214 | 129 | 3 | 129 | 323 | 19 | 232 | 9.69e-24 | 100 |
| MS.gene32489.t1 | MTR_6g091800 | 30.887 | 327 | 174 | 5 | 33 | 321 | 18 | 330 | 1.26e-45 | 158 |
| MS.gene32489.t1 | MTR_4g119770 | 31.325 | 332 | 196 | 9 | 22 | 325 | 2 | 329 | 1.09e-44 | 155 |
| MS.gene32489.t1 | MTR_3g098460 | 33.447 | 293 | 173 | 9 | 34 | 321 | 205 | 480 | 4.18e-44 | 157 |
| MS.gene32489.t1 | MTR_3g098460 | 29.958 | 237 | 141 | 7 | 92 | 318 | 157 | 378 | 6.04e-23 | 99.4 |
| MS.gene32489.t1 | MTR_3g098460 | 32.500 | 200 | 116 | 5 | 27 | 220 | 292 | 478 | 1.39e-19 | 89.4 |
| MS.gene32489.t1 | MTR_7g068340 | 33.096 | 281 | 164 | 7 | 45 | 322 | 98 | 357 | 5.88e-43 | 152 |
| MS.gene32489.t1 | MTR_7g068340 | 28.492 | 179 | 110 | 6 | 153 | 323 | 99 | 267 | 5.88e-11 | 63.2 |
| MS.gene32489.t1 | MTR_7g084400 | 33.557 | 298 | 163 | 9 | 34 | 321 | 213 | 485 | 2.21e-42 | 153 |
| MS.gene32489.t1 | MTR_7g084400 | 32.323 | 198 | 114 | 5 | 27 | 220 | 302 | 483 | 1.60e-22 | 98.2 |
| MS.gene32489.t1 | MTR_7g084400 | 33.152 | 184 | 111 | 4 | 140 | 318 | 212 | 388 | 1.35e-21 | 95.5 |
| MS.gene32489.t1 | MTR_3g107510 | 32.803 | 314 | 186 | 9 | 12 | 323 | 105 | 395 | 5.74e-42 | 150 |
| MS.gene32489.t1 | MTR_3g107510 | 29.224 | 219 | 137 | 6 | 15 | 229 | 196 | 400 | 1.13e-21 | 95.1 |
| MS.gene32489.t1 | MTR_3g107510 | 29.412 | 187 | 113 | 5 | 144 | 324 | 125 | 298 | 4.61e-17 | 81.6 |
| MS.gene32489.t1 | MTR_2g436930 | 30.915 | 317 | 189 | 9 | 36 | 326 | 17 | 329 | 1.65e-41 | 147 |
| MS.gene32489.t1 | MTR_2g436930 | 28.641 | 206 | 124 | 5 | 35 | 225 | 129 | 326 | 1.04e-16 | 80.1 |
| MS.gene32489.t1 | MTR_1g012030 | 33.220 | 295 | 175 | 9 | 30 | 321 | 135 | 410 | 3.46e-41 | 148 |
| MS.gene32489.t1 | MTR_1g012030 | 29.412 | 187 | 121 | 4 | 140 | 324 | 138 | 315 | 1.36e-19 | 89.4 |
| MS.gene32489.t1 | MTR_1g012030 | 28.708 | 209 | 131 | 6 | 15 | 219 | 213 | 407 | 9.19e-19 | 86.7 |
| MS.gene32489.t1 | MTR_8g096050 | 32.423 | 293 | 176 | 7 | 34 | 321 | 227 | 502 | 1.25e-40 | 149 |
| MS.gene32489.t1 | MTR_8g096050 | 34.239 | 184 | 111 | 5 | 140 | 320 | 226 | 402 | 4.48e-22 | 97.1 |
| MS.gene32489.t1 | MTR_8g096050 | 33.000 | 200 | 115 | 6 | 27 | 220 | 314 | 500 | 7.96e-21 | 93.2 |
| MS.gene32489.t1 | MTR_6g091800 | 34.836 | 244 | 131 | 5 | 33 | 262 | 18 | 247 | 1.38e-40 | 143 |
| MS.gene32489.t1 | MTR_6g091800 | 31.472 | 197 | 119 | 5 | 140 | 323 | 18 | 211 | 6.30e-19 | 85.5 |
| MS.gene32489.t1 | MTR_6g091800 | 34.836 | 244 | 131 | 5 | 33 | 262 | 18 | 247 | 2.31e-40 | 142 |
| MS.gene32489.t1 | MTR_6g091800 | 31.472 | 197 | 119 | 5 | 140 | 323 | 18 | 211 | 5.83e-19 | 85.5 |
| MS.gene32489.t1 | MTR_6g091800 | 30.097 | 309 | 164 | 5 | 33 | 303 | 18 | 312 | 5.03e-40 | 143 |
| MS.gene32489.t1 | MTR_4g114320 | 30.847 | 295 | 186 | 5 | 30 | 323 | 119 | 396 | 2.91e-39 | 143 |
| MS.gene32489.t1 | MTR_4g114320 | 29.302 | 215 | 131 | 7 | 19 | 226 | 198 | 398 | 3.67e-19 | 87.8 |
| MS.gene32489.t1 | MTR_6g091800 | 31.716 | 268 | 131 | 5 | 33 | 262 | 18 | 271 | 1.53e-37 | 136 |
| MS.gene32489.t1 | MTR_6g091800 | 31.716 | 268 | 131 | 5 | 33 | 262 | 18 | 271 | 2.36e-37 | 135 |
| MS.gene32489.t1 | MTR_6g034145 | 31.373 | 255 | 152 | 4 | 81 | 321 | 7 | 252 | 2.85e-36 | 131 |
| MS.gene32489.t1 | MTR_6g034145 | 27.632 | 228 | 140 | 7 | 16 | 229 | 43 | 259 | 3.18e-15 | 74.7 |
| MS.gene32489.t1 | MTR_6g034145 | 30.323 | 155 | 96 | 3 | 180 | 323 | 4 | 157 | 3.41e-14 | 71.6 |
| MS.gene32489.t1 | MTR_6g092210 | 31.325 | 249 | 154 | 4 | 81 | 321 | 7 | 246 | 1.81e-35 | 129 |
| MS.gene32489.t1 | MTR_6g092210 | 27.354 | 223 | 141 | 7 | 16 | 229 | 43 | 253 | 3.28e-14 | 71.6 |
| MS.gene32489.t1 | MTR_6g092210 | 28.859 | 149 | 100 | 3 | 180 | 323 | 4 | 151 | 1.71e-13 | 69.7 |
| MS.gene32489.t1 | MTR_4g016730 | 32.500 | 280 | 164 | 7 | 45 | 322 | 100 | 356 | 1.96e-35 | 132 |
| MS.gene32489.t1 | MTR_3g074490 | 30.476 | 315 | 175 | 7 | 29 | 321 | 111 | 403 | 5.47e-34 | 129 |
| MS.gene32489.t1 | MTR_3g104500 | 30.068 | 296 | 192 | 7 | 33 | 320 | 33 | 321 | 3.66e-33 | 125 |
| MS.gene32489.t1 | MTR_3g104500 | 24.771 | 218 | 141 | 6 | 125 | 323 | 14 | 227 | 1.44e-12 | 67.8 |
| MS.gene32489.t1 | MTR_4g119770 | 30.153 | 262 | 160 | 6 | 22 | 263 | 2 | 260 | 3.96e-31 | 118 |
| MS.gene32489.t1 | MTR_4g119770 | 30.000 | 200 | 116 | 5 | 139 | 318 | 12 | 207 | 1.11e-20 | 90.1 |
| MS.gene32489.t1 | MTR_8g090210 | 27.707 | 314 | 187 | 6 | 28 | 321 | 104 | 397 | 7.17e-30 | 117 |
| MS.gene32489.t1 | MTR_7g109135 | 30.640 | 297 | 181 | 9 | 36 | 321 | 24 | 306 | 8.51e-29 | 113 |
| MS.gene32489.t1 | MTR_7g109135 | 35.567 | 194 | 115 | 6 | 138 | 323 | 17 | 208 | 9.55e-20 | 88.6 |
| MS.gene32489.t1 | MTR_7g109135 | 31.351 | 185 | 116 | 6 | 48 | 229 | 137 | 313 | 2.14e-15 | 76.3 |
| MS.gene32489.t1 | MTR_6g091800 | 36.872 | 179 | 87 | 4 | 33 | 197 | 18 | 184 | 7.19e-28 | 107 |
| MS.gene32489.t1 | MTR_6g091800 | 31.765 | 170 | 100 | 5 | 140 | 296 | 18 | 184 | 4.34e-14 | 70.1 |
| MS.gene32489.t1 | MTR_4g005330 | 25.333 | 300 | 198 | 6 | 35 | 321 | 1 | 287 | 3.15e-27 | 108 |
| MS.gene32489.t1 | MTR_4g005330 | 25.000 | 304 | 202 | 6 | 31 | 321 | 63 | 353 | 4.53e-27 | 109 |
| MS.gene32489.t1 | MTR_2g436930 | 30.705 | 241 | 146 | 7 | 103 | 326 | 3 | 239 | 8.21e-27 | 106 |
| MS.gene32489.t1 | MTR_2g436930 | 28.641 | 206 | 124 | 5 | 35 | 225 | 39 | 236 | 5.33e-17 | 79.3 |
| MS.gene32489.t1 | MTR_5g055410 | 32.566 | 304 | 180 | 10 | 29 | 321 | 16 | 305 | 3.91e-26 | 106 |
| MS.gene32489.t1 | MTR_5g055410 | 34.118 | 170 | 107 | 4 | 157 | 323 | 37 | 204 | 3.49e-17 | 81.6 |
| MS.gene32489.t1 | MTR_3g028590 | 26.144 | 306 | 209 | 7 | 24 | 321 | 83 | 379 | 2.72e-25 | 105 |
| MS.gene32489.t1 | MTR_3g028590 | 26.144 | 306 | 209 | 7 | 24 | 321 | 87 | 383 | 3.20e-25 | 104 |
| MS.gene32489.t1 | MTR_6g091800 | 32.512 | 203 | 87 | 4 | 33 | 197 | 18 | 208 | 5.42e-25 | 100 |
| MS.gene32489.t1 | MTR_6g091800 | 34.959 | 123 | 75 | 3 | 140 | 259 | 18 | 138 | 5.20e-11 | 62.0 |
| MS.gene32489.t1 | MTR_7g109135 | 29.592 | 294 | 181 | 9 | 36 | 321 | 24 | 299 | 1.03e-24 | 102 |
| MS.gene32489.t1 | MTR_7g109135 | 33.679 | 193 | 113 | 7 | 138 | 323 | 17 | 201 | 3.81e-16 | 78.2 |
| MS.gene32489.t1 | MTR_7g109135 | 31.395 | 172 | 107 | 6 | 61 | 229 | 143 | 306 | 5.96e-14 | 71.6 |
| MS.gene32489.t1 | MTR_1g087840 | 29.310 | 290 | 182 | 8 | 46 | 325 | 31 | 307 | 1.28e-24 | 102 |
| MS.gene32489.t1 | MTR_1g087840 | 30.481 | 187 | 115 | 5 | 48 | 229 | 134 | 310 | 1.47e-16 | 79.3 |
| MS.gene32489.t1 | MTR_8g107270 | 24.561 | 285 | 199 | 6 | 33 | 309 | 17 | 293 | 1.54e-24 | 101 |
| MS.gene32489.t1 | MTR_8g107270 | 24.870 | 193 | 133 | 3 | 141 | 321 | 18 | 210 | 5.94e-11 | 62.8 |
| MS.gene32489.t1 | MTR_8g036880 | 25.733 | 307 | 210 | 7 | 24 | 321 | 92 | 389 | 6.64e-24 | 101 |
| MS.gene32489.t1 | MTR_4g078545 | 26.774 | 310 | 207 | 8 | 23 | 321 | 61 | 361 | 1.37e-23 | 100 |
| MS.gene32489.t1 | MTR_2g098070 | 27.097 | 310 | 206 | 8 | 23 | 321 | 52 | 352 | 1.50e-23 | 99.8 |
| MS.gene32489.t1 | MTR_8g098240 | 27.425 | 299 | 197 | 7 | 24 | 322 | 310 | 588 | 2.24e-23 | 100 |
| MS.gene32489.t1 | MTR_7g084400 | 33.333 | 222 | 124 | 8 | 34 | 247 | 207 | 412 | 2.31e-22 | 97.1 |
| MS.gene32489.t1 | MTR_7g084400 | 34.239 | 184 | 109 | 5 | 140 | 318 | 206 | 382 | 9.41e-22 | 95.5 |
| MS.gene32489.t1 | MTR_6g091910 | 31.100 | 209 | 121 | 6 | 33 | 229 | 18 | 215 | 4.20e-22 | 92.8 |
| MS.gene32489.t1 | MTR_6g091910 | 29.534 | 193 | 123 | 3 | 140 | 321 | 18 | 208 | 2.29e-19 | 85.5 |
| MS.gene32489.t1 | MTR_4g057850 | 26.207 | 290 | 182 | 10 | 35 | 311 | 23 | 293 | 2.67e-21 | 92.8 |
| MS.gene32489.t1 | MTR_4g057850 | 32.000 | 200 | 122 | 6 | 27 | 218 | 106 | 299 | 3.85e-13 | 69.3 |
| MS.gene32489.t1 | MTR_7g109135 | 31.405 | 242 | 141 | 9 | 91 | 321 | 1 | 228 | 4.05e-21 | 90.9 |
| MS.gene32489.t1 | MTR_7g109135 | 31.351 | 185 | 116 | 6 | 48 | 229 | 59 | 235 | 2.19e-15 | 74.7 |
| MS.gene32489.t1 | MTR_7g109135 | 34.351 | 131 | 83 | 3 | 193 | 322 | 1 | 129 | 6.34e-11 | 62.0 |
| MS.gene32489.t1 | MTR_5g073040 | 26.351 | 296 | 194 | 9 | 34 | 323 | 39 | 316 | 4.41e-21 | 92.4 |
| MS.gene32489.t1 | MTR_5g073040 | 30.811 | 185 | 119 | 3 | 142 | 325 | 40 | 216 | 1.64e-19 | 87.8 |
| MS.gene32489.t1 | MTR_5g073040 | 33.537 | 164 | 100 | 3 | 75 | 233 | 167 | 326 | 2.33e-14 | 73.2 |
| MS.gene32489.t1 | MTR_1g090330 | 23.203 | 306 | 205 | 5 | 26 | 318 | 6 | 294 | 8.12e-21 | 91.3 |
| MS.gene32489.t1 | MTR_7g117030 | 28.736 | 261 | 160 | 8 | 81 | 323 | 85 | 337 | 1.27e-20 | 91.3 |
| MS.gene32489.t1 | MTR_7g109135 | 34.091 | 176 | 101 | 7 | 155 | 321 | 38 | 207 | 8.26e-20 | 86.7 |
| MS.gene32489.t1 | MTR_7g109135 | 31.351 | 185 | 116 | 6 | 48 | 229 | 38 | 214 | 1.10e-15 | 75.5 |
| MS.gene32489.t1 | MTR_8g076760 | 30.279 | 251 | 150 | 7 | 86 | 321 | 65 | 305 | 5.55e-19 | 86.3 |
| MS.gene32489.t1 | MTR_8g076760 | 32.571 | 175 | 112 | 3 | 156 | 326 | 29 | 201 | 7.67e-19 | 85.9 |
| MS.gene32489.t1 | MTR_8g076760 | 26.923 | 208 | 133 | 7 | 33 | 228 | 112 | 312 | 8.27e-12 | 65.5 |
| MS.gene32489.t1 | MTR_6g034515 | 26.950 | 282 | 179 | 6 | 47 | 321 | 80 | 341 | 1.22e-18 | 85.9 |
| MS.gene32489.t1 | MTR_3g090820 | 26.056 | 284 | 180 | 5 | 62 | 321 | 110 | 387 | 1.62e-18 | 85.9 |
| MS.gene32489.t1 | MTR_8g066975 | 25.243 | 309 | 203 | 7 | 28 | 321 | 1 | 296 | 4.01e-18 | 83.6 |
| MS.gene32489.t1 | MTR_8g066975 | 32.178 | 202 | 122 | 5 | 132 | 322 | 3 | 200 | 4.47e-18 | 83.6 |
| MS.gene32489.t1 | MTR_5g030530 | 28.713 | 202 | 129 | 5 | 132 | 322 | 3 | 200 | 5.65e-18 | 83.2 |
| MS.gene32489.t1 | MTR_5g030530 | 24.092 | 303 | 203 | 7 | 33 | 321 | 7 | 296 | 9.16e-15 | 73.9 |
| MS.gene32489.t1 | MTR_1g097890 | 24.828 | 290 | 182 | 6 | 35 | 323 | 52 | 306 | 8.78e-18 | 82.8 |
| MS.gene32489.t1 | MTR_1g097890 | 29.592 | 196 | 120 | 4 | 25 | 219 | 123 | 301 | 3.34e-16 | 78.2 |
| MS.gene32489.t1 | MTR_1g097890 | 27.189 | 217 | 115 | 7 | 114 | 319 | 23 | 207 | 4.04e-12 | 66.2 |
| MS.gene32489.t1 | MTR_8g092080 | 27.974 | 311 | 179 | 12 | 19 | 323 | 36 | 307 | 3.98e-17 | 81.3 |
| MS.gene32489.t1 | MTR_8g092080 | 28.713 | 202 | 128 | 4 | 25 | 226 | 124 | 309 | 6.05e-16 | 77.8 |
| MS.gene32489.t1 | MTR_4g012850 | 31.720 | 186 | 117 | 5 | 140 | 321 | 15 | 194 | 7.98e-17 | 80.1 |
| MS.gene32489.t1 | MTR_4g012850 | 28.365 | 208 | 137 | 4 | 21 | 227 | 101 | 297 | 3.00e-16 | 78.2 |
| MS.gene32489.t1 | MTR_4g012850 | 25.430 | 291 | 190 | 9 | 33 | 315 | 15 | 286 | 1.65e-13 | 70.5 |
| MS.gene32489.t1 | MTR_3g025800 | 24.611 | 321 | 198 | 8 | 33 | 323 | 27 | 333 | 1.12e-16 | 80.1 |
| MS.gene32489.t1 | MTR_3g025800 | 24.091 | 220 | 144 | 3 | 122 | 318 | 6 | 225 | 5.32e-12 | 66.2 |
| MS.gene32489.t1 | MTR_2g102010 | 30.968 | 155 | 101 | 2 | 49 | 202 | 125 | 274 | 2.06e-16 | 78.6 |
| MS.gene32489.t1 | MTR_2g102010 | 25.182 | 274 | 175 | 7 | 33 | 296 | 16 | 269 | 4.33e-11 | 63.2 |
| MS.gene32489.t1 | MTR_3g100570 | 24.390 | 328 | 195 | 13 | 31 | 323 | 3 | 312 | 4.16e-16 | 78.2 |
| MS.gene32489.t1 | MTR_3g100570 | 22.222 | 216 | 153 | 3 | 14 | 221 | 101 | 309 | 1.70e-11 | 64.7 |
| MS.gene32489.t1 | MTR_6g015860 | 23.552 | 259 | 171 | 5 | 82 | 323 | 60 | 308 | 8.30e-16 | 77.4 |
| MS.gene32489.t1 | MTR_6g015860 | 30.168 | 179 | 109 | 9 | 124 | 294 | 4 | 174 | 9.03e-13 | 68.6 |
| MS.gene32489.t1 | MTR_7g015870 | 28.272 | 191 | 115 | 7 | 145 | 318 | 126 | 311 | 7.92e-15 | 74.3 |
| MS.gene32489.t1 | MTR_7g015870 | 27.805 | 205 | 133 | 6 | 119 | 314 | 4 | 202 | 2.63e-12 | 67.0 |
| MS.gene32489.t1 | MTR_4g094578 | 27.717 | 184 | 117 | 4 | 139 | 315 | 27 | 201 | 1.44e-14 | 73.6 |
| MS.gene32489.t1 | MTR_4g018750 | 24.306 | 288 | 195 | 7 | 40 | 318 | 21 | 294 | 1.99e-14 | 73.2 |
| MS.gene32489.t1 | MTR_7g015870 | 27.461 | 193 | 118 | 7 | 145 | 320 | 122 | 309 | 2.41e-14 | 73.2 |
| MS.gene32489.t1 | MTR_7g015870 | 27.586 | 203 | 131 | 7 | 121 | 314 | 3 | 198 | 1.54e-12 | 67.8 |
| MS.gene32489.t1 | MTR_1g088995 | 22.105 | 285 | 205 | 5 | 38 | 320 | 37 | 306 | 1.31e-13 | 70.9 |
| MS.gene32489.t1 | MTR_7g066690 | 22.635 | 296 | 206 | 7 | 40 | 326 | 23 | 304 | 1.84e-12 | 67.4 |
| MS.gene32489.t1 | MTR_6g033280 | 27.751 | 209 | 132 | 8 | 118 | 317 | 37 | 235 | 2.99e-12 | 67.0 |
| MS.gene32489.t1 | MTR_2g032610 | 23.985 | 271 | 187 | 7 | 59 | 317 | 52 | 315 | 7.62e-12 | 65.5 |
| MS.gene32489.t1 | MTR_5g081910 | 27.778 | 144 | 101 | 3 | 176 | 317 | 99 | 241 | 4.08e-11 | 62.8 |
| MS.gene32489.t1 | MTR_8g068890 | 21.148 | 331 | 204 | 11 | 31 | 323 | 3 | 314 | 4.13e-11 | 63.5 |
| MS.gene32489.t1 | MTR_5g081910 | 21.190 | 269 | 184 | 6 | 76 | 317 | 48 | 315 | 4.72e-11 | 63.5 |
| MS.gene32489.t1 | MTR_7g083790 | 27.586 | 174 | 113 | 5 | 148 | 317 | 90 | 254 | 4.97e-11 | 63.5 |
| MS.gene32489.t1 | MTR_3g462140 | 24.104 | 307 | 209 | 7 | 25 | 321 | 6 | 298 | 5.28e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32489.t1 | AT3G55640 | 70.606 | 330 | 91 | 2 | 1 | 326 | 3 | 330 | 2.76e-170 | 476 |
| MS.gene32489.t1 | AT3G55640 | 70.606 | 330 | 91 | 2 | 1 | 326 | 3 | 330 | 2.76e-170 | 476 |
| MS.gene32489.t1 | AT3G53940 | 63.260 | 362 | 92 | 2 | 4 | 324 | 2 | 363 | 1.24e-164 | 463 |
| MS.gene32489.t1 | AT2G37890 | 63.881 | 335 | 110 | 1 | 1 | 324 | 1 | 335 | 1.82e-156 | 441 |
| MS.gene32489.t1 | AT3G55640 | 68.651 | 252 | 73 | 2 | 1 | 248 | 3 | 252 | 6.36e-122 | 351 |
| MS.gene32489.t1 | AT3G55640 | 32.353 | 204 | 120 | 6 | 127 | 318 | 26 | 223 | 1.27e-19 | 87.0 |
| MS.gene32489.t1 | AT3G55640 | 68.651 | 252 | 73 | 2 | 1 | 248 | 3 | 252 | 6.36e-122 | 351 |
| MS.gene32489.t1 | AT3G55640 | 32.353 | 204 | 120 | 6 | 127 | 318 | 26 | 223 | 1.27e-19 | 87.0 |
| MS.gene32489.t1 | AT3G53940 | 58.392 | 286 | 78 | 2 | 4 | 248 | 2 | 287 | 3.20e-113 | 330 |
| MS.gene32489.t1 | AT3G53940 | 29.358 | 218 | 133 | 4 | 113 | 318 | 50 | 258 | 1.44e-19 | 87.4 |
| MS.gene32489.t1 | AT4G01100 | 37.459 | 307 | 169 | 6 | 34 | 321 | 42 | 344 | 1.05e-60 | 198 |
| MS.gene32489.t1 | AT4G01100 | 34.031 | 191 | 116 | 4 | 136 | 318 | 37 | 225 | 4.47e-23 | 98.2 |
| MS.gene32489.t1 | AT4G01100 | 36.137 | 321 | 168 | 7 | 34 | 321 | 42 | 358 | 6.10e-58 | 191 |
| MS.gene32489.t1 | AT4G01100 | 32.683 | 205 | 114 | 5 | 136 | 318 | 37 | 239 | 3.08e-21 | 93.6 |
| MS.gene32489.t1 | AT4G01100 | 36.242 | 298 | 167 | 6 | 43 | 321 | 1 | 294 | 1.91e-56 | 185 |
| MS.gene32489.t1 | AT5G51050 | 35.974 | 303 | 165 | 9 | 26 | 321 | 215 | 495 | 6.16e-47 | 166 |
| MS.gene32489.t1 | AT4G26180 | 32.258 | 310 | 171 | 7 | 32 | 321 | 19 | 309 | 8.42e-45 | 156 |
| MS.gene32489.t1 | AT4G32400 | 35.473 | 296 | 171 | 7 | 30 | 323 | 110 | 387 | 1.37e-43 | 154 |
| MS.gene32489.t1 | AT4G32400 | 31.163 | 215 | 128 | 6 | 20 | 228 | 191 | 391 | 2.60e-21 | 94.0 |
| MS.gene32489.t1 | AT5G61810 | 32.423 | 293 | 170 | 7 | 34 | 322 | 65 | 333 | 9.20e-42 | 148 |
| MS.gene32489.t1 | AT5G61810 | 29.897 | 194 | 124 | 4 | 27 | 220 | 149 | 330 | 3.61e-19 | 87.0 |
| MS.gene32489.t1 | AT5G61810 | 32.423 | 293 | 170 | 7 | 34 | 322 | 208 | 476 | 1.29e-40 | 148 |
| MS.gene32489.t1 | AT5G61810 | 29.897 | 194 | 124 | 4 | 27 | 220 | 292 | 473 | 9.37e-19 | 87.0 |
| MS.gene32489.t1 | AT1G14560 | 32.203 | 295 | 164 | 8 | 45 | 318 | 38 | 317 | 1.69e-40 | 144 |
| MS.gene32489.t1 | AT1G14560 | 29.646 | 226 | 131 | 7 | 16 | 223 | 105 | 320 | 6.53e-21 | 92.0 |
| MS.gene32489.t1 | AT1G14560 | 30.435 | 184 | 114 | 4 | 153 | 323 | 39 | 221 | 1.04e-16 | 80.1 |
| MS.gene32489.t1 | AT5G48970 | 31.975 | 319 | 184 | 9 | 36 | 325 | 24 | 338 | 3.67e-40 | 144 |
| MS.gene32489.t1 | AT3G21390 | 31.596 | 307 | 180 | 7 | 36 | 315 | 21 | 324 | 5.22e-40 | 143 |
| MS.gene32489.t1 | AT3G21390 | 29.843 | 191 | 114 | 5 | 144 | 318 | 22 | 208 | 4.02e-19 | 87.0 |
| MS.gene32489.t1 | AT3G21390 | 31.596 | 307 | 180 | 7 | 36 | 315 | 43 | 346 | 6.46e-40 | 144 |
| MS.gene32489.t1 | AT3G21390 | 29.688 | 192 | 115 | 5 | 143 | 318 | 43 | 230 | 4.97e-19 | 87.0 |
| MS.gene32489.t1 | AT5G01500 | 32.258 | 279 | 169 | 5 | 45 | 322 | 130 | 389 | 9.26e-40 | 144 |
| MS.gene32489.t1 | AT3G51870 | 32.746 | 284 | 161 | 8 | 45 | 322 | 102 | 361 | 1.16e-39 | 144 |
| MS.gene32489.t1 | AT3G51870 | 29.609 | 179 | 108 | 6 | 153 | 323 | 103 | 271 | 1.67e-12 | 68.2 |
| MS.gene32489.t1 | AT4G26180 | 31.507 | 292 | 161 | 7 | 32 | 303 | 19 | 291 | 4.83e-39 | 140 |
| MS.gene32489.t1 | AT4G26180 | 30.729 | 192 | 117 | 5 | 140 | 318 | 20 | 208 | 1.19e-19 | 87.8 |
| MS.gene32489.t1 | AT5G64970 | 30.573 | 314 | 178 | 7 | 28 | 321 | 129 | 422 | 1.42e-35 | 134 |
| MS.gene32489.t1 | AT5G48970 | 33.333 | 264 | 152 | 7 | 82 | 325 | 8 | 267 | 3.09e-35 | 129 |
| MS.gene32489.t1 | AT5G48970 | 32.886 | 149 | 92 | 4 | 179 | 323 | 3 | 147 | 2.76e-17 | 80.9 |
| MS.gene32489.t1 | AT5G07320 | 32.404 | 287 | 160 | 10 | 43 | 322 | 218 | 477 | 3.35e-35 | 133 |
| MS.gene32489.t1 | AT5G07320 | 32.821 | 195 | 117 | 5 | 27 | 220 | 293 | 474 | 4.31e-19 | 88.2 |
| MS.gene32489.t1 | AT1G14560 | 31.429 | 280 | 156 | 8 | 45 | 303 | 38 | 302 | 1.08e-34 | 129 |
| MS.gene32489.t1 | AT1G14560 | 30.435 | 184 | 114 | 4 | 153 | 323 | 39 | 221 | 7.78e-17 | 80.1 |
| MS.gene32489.t1 | AT5G64970 | 30.293 | 307 | 174 | 7 | 35 | 321 | 12 | 298 | 1.20e-34 | 128 |
| MS.gene32489.t1 | AT5G56450 | 29.245 | 318 | 201 | 9 | 20 | 321 | 16 | 325 | 7.65e-33 | 124 |
| MS.gene32489.t1 | AT5G56450 | 26.282 | 156 | 110 | 2 | 174 | 325 | 79 | 233 | 2.08e-13 | 70.5 |
| MS.gene32489.t1 | AT1G78180 | 30.422 | 332 | 184 | 7 | 10 | 321 | 111 | 415 | 3.29e-31 | 122 |
| MS.gene32489.t1 | AT1G14560 | 34.649 | 228 | 118 | 7 | 112 | 318 | 2 | 219 | 1.87e-30 | 115 |
| MS.gene32489.t1 | AT1G14560 | 29.646 | 226 | 131 | 7 | 16 | 223 | 7 | 222 | 1.28e-21 | 92.0 |
| MS.gene32489.t1 | AT5G64970 | 30.068 | 296 | 167 | 7 | 28 | 303 | 129 | 404 | 7.87e-30 | 117 |
| MS.gene32489.t1 | AT4G11440 | 29.010 | 293 | 184 | 6 | 35 | 322 | 331 | 604 | 1.32e-26 | 110 |
| MS.gene32489.t1 | AT4G11440 | 29.010 | 293 | 184 | 6 | 35 | 322 | 331 | 604 | 1.32e-26 | 110 |
| MS.gene32489.t1 | AT3G08580 | 26.846 | 298 | 200 | 7 | 33 | 321 | 83 | 371 | 1.30e-25 | 105 |
| MS.gene32489.t1 | AT3G08580 | 26.846 | 298 | 200 | 7 | 33 | 321 | 83 | 371 | 1.30e-25 | 105 |
| MS.gene32489.t1 | AT3G20240 | 24.756 | 307 | 205 | 7 | 33 | 326 | 51 | 344 | 3.84e-25 | 103 |
| MS.gene32489.t1 | AT1G07030 | 27.703 | 296 | 195 | 6 | 34 | 325 | 40 | 320 | 4.52e-25 | 103 |
| MS.gene32489.t1 | AT1G07030 | 34.756 | 164 | 94 | 4 | 75 | 231 | 168 | 325 | 2.20e-16 | 79.0 |
| MS.gene32489.t1 | AT4G27940 | 29.231 | 260 | 160 | 5 | 80 | 321 | 154 | 407 | 1.02e-24 | 103 |
| MS.gene32489.t1 | AT2G30160 | 27.425 | 299 | 195 | 7 | 34 | 325 | 42 | 325 | 1.20e-24 | 102 |
| MS.gene32489.t1 | AT1G25380 | 30.742 | 283 | 172 | 8 | 46 | 317 | 33 | 302 | 3.47e-24 | 101 |
| MS.gene32489.t1 | AT1G25380 | 28.497 | 193 | 121 | 6 | 47 | 229 | 134 | 319 | 2.03e-17 | 82.4 |
| MS.gene32489.t1 | AT1G25380 | 30.742 | 283 | 172 | 8 | 46 | 317 | 33 | 302 | 3.47e-24 | 101 |
| MS.gene32489.t1 | AT1G25380 | 28.497 | 193 | 121 | 6 | 47 | 229 | 134 | 319 | 2.03e-17 | 82.4 |
| MS.gene32489.t1 | AT4G28390 | 25.879 | 313 | 213 | 8 | 19 | 321 | 66 | 369 | 3.52e-24 | 102 |
| MS.gene32489.t1 | AT4G28390 | 25.879 | 313 | 213 | 8 | 19 | 321 | 66 | 369 | 3.52e-24 | 102 |
| MS.gene32489.t1 | AT5G13490 | 25.839 | 298 | 203 | 7 | 33 | 321 | 87 | 375 | 8.90e-24 | 100 |
| MS.gene32489.t1 | AT5G13490 | 25.839 | 298 | 203 | 7 | 33 | 321 | 87 | 375 | 8.90e-24 | 100 |
| MS.gene32489.t1 | AT5G01340 | 25.083 | 303 | 195 | 8 | 20 | 311 | 8 | 289 | 2.50e-21 | 92.8 |
| MS.gene32489.t1 | AT1G34065 | 29.545 | 308 | 178 | 13 | 19 | 323 | 59 | 330 | 6.64e-21 | 92.0 |
| MS.gene32489.t1 | AT1G34065 | 29.469 | 207 | 127 | 5 | 25 | 230 | 147 | 335 | 1.21e-17 | 82.8 |
| MS.gene32489.t1 | AT1G34065 | 26.697 | 221 | 112 | 6 | 120 | 319 | 40 | 231 | 4.98e-13 | 69.3 |
| MS.gene32489.t1 | AT1G34065 | 29.545 | 308 | 178 | 13 | 19 | 323 | 66 | 337 | 7.00e-21 | 92.0 |
| MS.gene32489.t1 | AT1G34065 | 29.469 | 207 | 127 | 5 | 25 | 230 | 154 | 342 | 1.70e-17 | 82.4 |
| MS.gene32489.t1 | AT1G34065 | 26.697 | 221 | 112 | 6 | 120 | 319 | 47 | 238 | 5.91e-13 | 69.3 |
| MS.gene32489.t1 | AT2G47490 | 27.869 | 305 | 202 | 8 | 24 | 321 | 7 | 300 | 1.62e-20 | 90.5 |
| MS.gene32489.t1 | AT2G47490 | 35.057 | 174 | 102 | 5 | 157 | 323 | 33 | 202 | 2.23e-15 | 75.9 |
| MS.gene32489.t1 | AT2G47490 | 28.947 | 190 | 123 | 7 | 48 | 233 | 131 | 312 | 7.49e-15 | 74.3 |
| MS.gene32489.t1 | AT5G66380 | 28.990 | 307 | 189 | 10 | 36 | 326 | 12 | 305 | 4.43e-20 | 89.4 |
| MS.gene32489.t1 | AT5G17400 | 24.476 | 286 | 200 | 6 | 32 | 309 | 12 | 289 | 5.34e-19 | 86.3 |
| MS.gene32489.t1 | AT1G14140 | 24.262 | 305 | 200 | 7 | 30 | 320 | 12 | 299 | 3.75e-18 | 84.0 |
| MS.gene32489.t1 | AT5G46800 | 25.325 | 308 | 196 | 7 | 33 | 321 | 7 | 299 | 1.31e-17 | 82.4 |
| MS.gene32489.t1 | AT5G46800 | 29.208 | 202 | 129 | 3 | 135 | 322 | 2 | 203 | 1.65e-17 | 82.0 |
| MS.gene32489.t1 | AT5G46800 | 25.325 | 308 | 196 | 7 | 33 | 321 | 7 | 299 | 1.31e-17 | 82.4 |
| MS.gene32489.t1 | AT5G46800 | 29.208 | 202 | 129 | 3 | 135 | 322 | 2 | 203 | 1.65e-17 | 82.0 |
| MS.gene32489.t1 | AT5G46800 | 25.325 | 308 | 196 | 7 | 33 | 321 | 7 | 299 | 1.31e-17 | 82.4 |
| MS.gene32489.t1 | AT5G46800 | 29.208 | 202 | 129 | 3 | 135 | 322 | 2 | 203 | 1.65e-17 | 82.0 |
| MS.gene32489.t1 | AT1G79900 | 30.256 | 195 | 119 | 5 | 37 | 229 | 112 | 291 | 8.99e-17 | 79.7 |
| MS.gene32489.t1 | AT2G33820 | 26.282 | 312 | 198 | 11 | 26 | 320 | 10 | 306 | 2.93e-16 | 78.6 |
| MS.gene32489.t1 | AT5G58970 | 26.115 | 314 | 195 | 9 | 24 | 321 | 6 | 298 | 6.49e-16 | 77.4 |
| MS.gene32489.t1 | AT4G39460 | 29.808 | 208 | 122 | 5 | 25 | 228 | 130 | 317 | 6.58e-16 | 77.8 |
| MS.gene32489.t1 | AT4G39460 | 27.797 | 295 | 169 | 12 | 34 | 323 | 58 | 313 | 1.05e-15 | 77.0 |
| MS.gene32489.t1 | AT4G39460 | 29.808 | 208 | 122 | 5 | 25 | 228 | 130 | 317 | 6.58e-16 | 77.8 |
| MS.gene32489.t1 | AT4G39460 | 27.797 | 295 | 169 | 12 | 34 | 323 | 58 | 313 | 1.05e-15 | 77.0 |
| MS.gene32489.t1 | AT4G39460 | 29.808 | 208 | 122 | 5 | 25 | 228 | 130 | 317 | 6.58e-16 | 77.8 |
| MS.gene32489.t1 | AT4G39460 | 27.797 | 295 | 169 | 12 | 34 | 323 | 58 | 313 | 1.05e-15 | 77.0 |
| MS.gene32489.t1 | AT2G46320 | 26.848 | 257 | 156 | 7 | 81 | 318 | 109 | 352 | 2.04e-15 | 76.6 |
| MS.gene32489.t1 | AT1G74240 | 24.545 | 330 | 208 | 6 | 16 | 318 | 18 | 333 | 5.64e-15 | 75.5 |
| MS.gene32489.t1 | AT5G42130 | 24.549 | 277 | 187 | 5 | 50 | 321 | 134 | 393 | 1.24e-14 | 74.7 |
| MS.gene32489.t1 | AT3G54110 | 23.208 | 293 | 204 | 6 | 40 | 324 | 21 | 300 | 1.75e-14 | 73.2 |
| MS.gene32489.t1 | AT3G54110 | 24.868 | 189 | 133 | 2 | 33 | 221 | 117 | 296 | 3.69e-11 | 63.5 |
| MS.gene32489.t1 | AT2G46320 | 26.482 | 253 | 154 | 7 | 85 | 318 | 14 | 253 | 3.07e-14 | 72.0 |
| MS.gene32489.t1 | AT2G46320 | 26.482 | 253 | 154 | 7 | 85 | 318 | 14 | 253 | 3.07e-14 | 72.0 |
| MS.gene32489.t1 | AT2G46320 | 26.482 | 253 | 154 | 7 | 85 | 318 | 14 | 253 | 3.07e-14 | 72.0 |
| MS.gene32489.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 62 | 237 | 4.35e-14 | 71.2 |
| MS.gene32489.t1 | AT4G03115 | 23.243 | 185 | 137 | 2 | 134 | 318 | 56 | 235 | 4.73e-12 | 65.5 |
| MS.gene32489.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 70 | 245 | 4.49e-14 | 71.2 |
| MS.gene32489.t1 | AT4G03115 | 21.429 | 238 | 174 | 3 | 81 | 318 | 19 | 243 | 4.09e-12 | 65.9 |
| MS.gene32489.t1 | AT4G03115 | 21.725 | 313 | 224 | 6 | 9 | 318 | 12 | 306 | 6.11e-14 | 72.0 |
| MS.gene32489.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 133 | 308 | 6.34e-14 | 71.6 |
| MS.gene32489.t1 | AT2G33820 | 25.625 | 320 | 198 | 12 | 26 | 320 | 10 | 314 | 8.36e-14 | 71.6 |
| MS.gene32489.t1 | AT4G03115 | 21.382 | 304 | 221 | 5 | 15 | 318 | 53 | 338 | 1.05e-13 | 71.2 |
| MS.gene32489.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 165 | 340 | 1.13e-13 | 71.2 |
| MS.gene32489.t1 | AT2G22500 | 22.884 | 319 | 197 | 9 | 37 | 323 | 9 | 310 | 2.62e-13 | 70.1 |
| MS.gene32489.t1 | AT3G48850 | 27.128 | 188 | 124 | 5 | 142 | 324 | 72 | 251 | 3.09e-13 | 70.1 |
| MS.gene32489.t1 | AT5G15640 | 28.500 | 200 | 119 | 6 | 142 | 322 | 126 | 320 | 9.73e-13 | 68.6 |
| MS.gene32489.t1 | AT5G15640 | 28.500 | 200 | 119 | 6 | 142 | 322 | 119 | 313 | 9.80e-13 | 68.2 |
| MS.gene32489.t1 | AT5G09470 | 25.926 | 189 | 133 | 2 | 31 | 219 | 148 | 329 | 1.11e-12 | 68.2 |
| MS.gene32489.t1 | AT4G24570 | 21.429 | 322 | 212 | 7 | 31 | 323 | 3 | 312 | 1.22e-12 | 68.2 |
| MS.gene32489.t1 | AT2G17270 | 24.713 | 174 | 123 | 2 | 142 | 315 | 23 | 188 | 1.90e-12 | 67.4 |
| MS.gene32489.t1 | AT5G14040 | 28.736 | 174 | 111 | 5 | 148 | 317 | 90 | 254 | 2.74e-11 | 64.3 |
| MS.gene32489.t1 | AT2G33820 | 25.424 | 177 | 131 | 1 | 41 | 216 | 43 | 219 | 2.93e-11 | 62.8 |
| MS.gene32489.t1 | AT1G74240 | 24.101 | 278 | 172 | 5 | 68 | 318 | 20 | 285 | 5.38e-11 | 63.2 |
Find 82 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCTTGTGGCAGTCTTTC+AGG | 0.123605 | 5.1:+63126554 | MS.gene32489:CDS |
| TAATCCATGAAGAGGGGTTT+AGG | 0.243240 | 5.1:+63125599 | MS.gene32489:CDS |
| GAGAAGCTGATTGCTATATT+TGG | 0.270991 | 5.1:-63126355 | None:intergenic |
| GGGATTACTCGGCCTTTATA+AGG | 0.273893 | 5.1:+63126220 | MS.gene32489:CDS |
| CTTTGAGGAAAGCGAGTATA+TGG | 0.320572 | 5.1:+63125560 | MS.gene32489:CDS |
| AATCCATGAAGAGGGGTTTA+GGG | 0.337988 | 5.1:+63125600 | MS.gene32489:CDS |
| TTTACTTACTATAGAGGTAT+TGG | 0.338091 | 5.1:+63126167 | MS.gene32489:CDS |
| ATGAAAGCTTGAGATCGTTT+TGG | 0.339773 | 5.1:+63126383 | MS.gene32489:CDS |
| CGATCTCAAGCTTTCATATA+CGG | 0.347975 | 5.1:-63126377 | None:intergenic |
| TTCAACTGTTGTTGTTAGTC+TGG | 0.353204 | 5.1:+63126535 | MS.gene32489:CDS |
| ATTCTAATGTTGCAACTTTG+AGG | 0.359407 | 5.1:+63125545 | MS.gene32489:CDS |
| AAGCCCTAAACCCCTCTTCA+TGG | 0.361238 | 5.1:-63125603 | None:intergenic |
| GGCACAACCTTATAGTATTC+AGG | 0.364759 | 5.1:-63128191 | None:intergenic |
| TTTGTTGGTGGTGGGTTGGC+AGG | 0.370802 | 5.1:+63125862 | MS.gene32489:CDS |
| CTCGGCCTTTATAAGGGACT+TGG | 0.408288 | 5.1:+63126227 | MS.gene32489:CDS |
| TCAGGCATTGCATCATCAAC+AGG | 0.416081 | 5.1:+63126572 | MS.gene32489:CDS |
| AAGAACGCGGCTTGCTGCAC+AGG | 0.423096 | 5.1:+63125924 | MS.gene32489:CDS |
| CTTCTCGCCGGAGGAGTTGC+CGG | 0.423493 | 5.1:+63124520 | MS.gene32489:CDS |
| ACAAACAATTGTCAAGGAAG+AGG | 0.426240 | 5.1:+63126199 | MS.gene32489:CDS |
| GGATTACTCGGCCTTTATAA+GGG | 0.437307 | 5.1:+63126221 | MS.gene32489:CDS |
| TAGTTCCAAGTCCCTTATAA+AGG | 0.439391 | 5.1:-63126232 | None:intergenic |
| TAACGGTGGACGGTGGTGTT+CGG | 0.453198 | 5.1:+63124446 | MS.gene32489:CDS |
| CAACCACCGCCGCAACAGAT+TGG | 0.456851 | 5.1:+63124484 | MS.gene32489:CDS |
| GTTCCAATCTGTTGCGGCGG+TGG | 0.457668 | 5.1:-63124487 | None:intergenic |
| TAAAAGTTAACAGAAGAGTA+AGG | 0.459944 | 5.1:-63125664 | None:intergenic |
| TGCTACATCTACTTATCCCT+TGG | 0.467252 | 5.1:+63125894 | MS.gene32489:CDS |
| GTACATTCAAGCATATATTC+CGG | 0.468396 | 5.1:+63128132 | MS.gene32489:CDS |
| TTCAAGAATAATCCATGAAG+AGG | 0.469893 | 5.1:+63125591 | MS.gene32489:CDS |
| TGGAGATGCAAACGGAAGCT+AGG | 0.470661 | 5.1:+63124416 | None:intergenic |
| TGGTGCTAATGCAGACTGTT+GGG | 0.472674 | 5.1:+63126332 | MS.gene32489:intron |
| ATATGCAGCAACGTTTCCAT+TGG | 0.474353 | 5.1:+63128037 | MS.gene32489:intron |
| GTGTACAATACAGGTCTCTT+TGG | 0.475434 | 5.1:+63128110 | MS.gene32489:CDS |
| CAGGTAAAATTCCTCTGTAA+AGG | 0.481174 | 5.1:-63128172 | None:intergenic |
| CTGGTGCTAATGCAGACTGT+TGG | 0.488868 | 5.1:+63126331 | MS.gene32489:intron |
| TTGGAATTTGGAGATGCAAA+CGG | 0.491470 | 5.1:+63124408 | None:intergenic |
| CAAAGCTCCGGCAACTCCTC+CGG | 0.494245 | 5.1:-63124527 | None:intergenic |
| CAAACAATTGTCAAGGAAGA+GGG | 0.494902 | 5.1:+63126200 | MS.gene32489:CDS |
| CGAGCCCGTGTGTACAATAC+AGG | 0.501443 | 5.1:+63128101 | MS.gene32489:CDS |
| AACCATCTTCAGTGTCTCAT+AGG | 0.501803 | 5.1:-63128237 | None:intergenic |
| GACCTATGAGACACTGAAGA+TGG | 0.501950 | 5.1:+63128235 | MS.gene32489:CDS |
| TCTCTATTACTTTGCAGTTG+CGG | 0.504953 | 5.1:-63125811 | None:intergenic |
| TTCTTACGAGCATTACAAGA+AGG | 0.526863 | 5.1:+63125687 | MS.gene32489:CDS |
| TATAAGGTTGTGCCTGGTGT+AGG | 0.529307 | 5.1:+63128200 | MS.gene32489:CDS |
| TAACAGAAGAGTAAGGTAAA+CGG | 0.531609 | 5.1:-63125657 | None:intergenic |
| GGAAGCTAGGGTTGGTGTAA+CGG | 0.532148 | 5.1:+63124429 | MS.gene32489:CDS |
| CTCCGTCTAACAAGATCCAA+TGG | 0.539106 | 5.1:-63128053 | None:intergenic |
| TCAAGAATAATCCATGAAGA+GGG | 0.543154 | 5.1:+63125592 | MS.gene32489:CDS |
| AGGGTTGGTGTAACGGTGGA+CGG | 0.554866 | 5.1:+63124436 | MS.gene32489:CDS |
| GGAGATGCAAACGGAAGCTA+GGG | 0.555939 | 5.1:+63124417 | None:intergenic |
| AACAACAACAGTTGAATCAT+CGG | 0.558241 | 5.1:-63126528 | None:intergenic |
| GTCAAGGAAGAGGGATTACT+CGG | 0.560113 | 5.1:+63126209 | MS.gene32489:CDS |
| ACTATTTCTCAGCTTCTCGC+CGG | 0.561608 | 5.1:+63124508 | MS.gene32489:CDS |
| AAGCATATATTCCGGTCAGA+AGG | 0.563525 | 5.1:+63128140 | MS.gene32489:CDS |
| TTCCATTGGATCTTGTTAGA+CGG | 0.564464 | 5.1:+63128051 | MS.gene32489:CDS |
| GGGACTTGGAACTACCCTCT+TGG | 0.572235 | 5.1:+63126241 | MS.gene32489:CDS |
| AGTTGATGGGTGTAATCATA+CGG | 0.572720 | 5.1:-63128276 | None:intergenic |
| CCGCGTTCTTACAAGATCCA+AGG | 0.576326 | 5.1:-63125911 | None:intergenic |
| TGCTTTACAAACAATTGTCA+AGG | 0.578320 | 5.1:+63126193 | MS.gene32489:CDS |
| AGACGGAGGAAGCAACTTGA+GGG | 0.579075 | 5.1:+63128068 | MS.gene32489:CDS |
| CGCGTTCTTACAAGATCCAA+GGG | 0.583255 | 5.1:-63125910 | None:intergenic |
| GGCCACGCAAACCTTCTGAC+CGG | 0.592865 | 5.1:-63128151 | None:intergenic |
| TAGACGGAGGAAGCAACTTG+AGG | 0.593462 | 5.1:+63128067 | MS.gene32489:CDS |
| ATTTCTCAGCTTCTCGCCGG+AGG | 0.601058 | 5.1:+63124511 | MS.gene32489:CDS |
| GAATACTATAAGGTTGTGCC+TGG | 0.602847 | 5.1:+63128194 | MS.gene32489:CDS |
| ATGCAAACGGAAGCTAGGGT+TGG | 0.605982 | 5.1:+63124421 | MS.gene32489:CDS |
| CCTTGGATCTTGTAAGAACG+CGG | 0.611552 | 5.1:+63125911 | MS.gene32489:CDS |
| TTCCGGTCAGAAGGTTTGCG+TGG | 0.617988 | 5.1:+63128149 | MS.gene32489:CDS |
| CATTGGATCTTGTTAGACGG+AGG | 0.625988 | 5.1:+63128054 | MS.gene32489:CDS |
| GAAATAGTTCCAATCTGTTG+CGG | 0.634856 | 5.1:-63124493 | None:intergenic |
| AGAGACCTGTATTGTACACA+CGG | 0.636276 | 5.1:-63128106 | None:intergenic |
| GGTTTGCGTGGCCTTTACAG+AGG | 0.639547 | 5.1:+63128161 | MS.gene32489:CDS |
| CAAGAATAATCCATGAAGAG+GGG | 0.640978 | 5.1:+63125593 | MS.gene32489:CDS |
| GTTGTTGTTAGTCTGGCTTG+TGG | 0.646435 | 5.1:+63126542 | MS.gene32489:CDS |
| AGCTAGGGTTGGTGTAACGG+TGG | 0.654947 | 5.1:+63124432 | MS.gene32489:CDS |
| ACGGAGGAAGCAACTTGAGG+GGG | 0.659118 | 5.1:+63128070 | MS.gene32489:CDS |
| GTTGGTGTAACGGTGGACGG+TGG | 0.659448 | 5.1:+63124439 | MS.gene32489:CDS |
| GACGGAGGAAGCAACTTGAG+GGG | 0.659793 | 5.1:+63128069 | MS.gene32489:CDS |
| ATAGTTCCAATCTGTTGCGG+CGG | 0.660860 | 5.1:-63124490 | None:intergenic |
| ATAAAACAAATGCCTACACC+AGG | 0.667613 | 5.1:-63128212 | None:intergenic |
| AGGATTGTGAGTCTAGCAAG+TGG | 0.683649 | 5.1:-63124568 | None:intergenic |
| ATAATAACATCATACCAAGA+GGG | 0.684442 | 5.1:-63126255 | None:intergenic |
| GAGACCTGTATTGTACACAC+GGG | 0.686846 | 5.1:-63128105 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTCATTTTGTTATT+GGG | + | chr5.1:63124645-63124664 | MS.gene32489:intron | 10.0% |
| !!! | TTTTTTATTCATTTTGTTAT+TGG | + | chr5.1:63124644-63124663 | MS.gene32489:intron | 10.0% |
| !! | CATATATTATCAATATCAAT+TGG | + | chr5.1:63127474-63127493 | MS.gene32489:intron | 15.0% |
| !! | TTATGAAAATAAGGTAAAAA+TGG | + | chr5.1:63124994-63125013 | MS.gene32489:intron | 15.0% |
| !!! | ATAATAATTCTAGAAAACTA+AGG | - | chr5.1:63125481-63125500 | None:intergenic | 15.0% |
| !!! | CAATTGATATTGATAATATA+TGG | - | chr5.1:63127476-63127495 | None:intergenic | 15.0% |
| !!! | TTAGTAATTTTGTTGTATTT+TGG | + | chr5.1:63124670-63124689 | MS.gene32489:intron | 15.0% |
| !!! | TTCTTCAATTTTTATTTAAC+TGG | - | chr5.1:63126828-63126847 | None:intergenic | 15.0% |
| !!! | TTTTGAATTGAGATAATTTT+GGG | + | chr5.1:63124764-63124783 | MS.gene32489:intron | 15.0% |
| !! | AAATTATCAGGAATATGTAT+AGG | - | chr5.1:63126689-63126708 | None:intergenic | 20.0% |
| !! | AAATTCAATAGTTTGACTAA+AGG | - | chr5.1:63126852-63126871 | None:intergenic | 20.0% |
| !! | ACATGTCATAAAATAAAACT+TGG | - | chr5.1:63127109-63127128 | None:intergenic | 20.0% |
| !! | ACTGTATGAGTTAATTAATT+TGG | + | chr5.1:63124741-63124760 | MS.gene32489:intron | 20.0% |
| !! | ATAAATGAAATTGTCAACAT+AGG | + | chr5.1:63127414-63127433 | MS.gene32489:intron | 20.0% |
| !! | ATAAGTTGTTTATCCAAATA+GGG | + | chr5.1:63125243-63125262 | MS.gene32489:intron | 20.0% |
| !! | CATGTCATAAAATAAAACTT+GGG | - | chr5.1:63127108-63127127 | None:intergenic | 20.0% |
| !! | TAATAAATTTCCTGAAAAAC+AGG | - | chr5.1:63127053-63127072 | None:intergenic | 20.0% |
| !! | TATGAATATACATGAATTAG+AGG | - | chr5.1:63126467-63126486 | None:intergenic | 20.0% |
| !! | TATTATCAATATCAATTGGA+TGG | + | chr5.1:63127478-63127497 | MS.gene32489:intron | 20.0% |
| !! | TTCAAATATGATTAGATTTC+TGG | + | chr5.1:63127876-63127895 | MS.gene32489:intron | 20.0% |
| !! | TTTCCAAAATTGAAATTAAG+AGG | - | chr5.1:63126015-63126034 | None:intergenic | 20.0% |
| !!! | AACATAATTTGTTATTGAAG+TGG | - | chr5.1:63127835-63127854 | None:intergenic | 20.0% |
| !!! | AATTTTACCTGAATACTATA+AGG | + | chr5.1:63128184-63128203 | MS.gene32489:CDS | 20.0% |
| !!! | ATAAATTTTTCACCTGAAAA+AGG | - | chr5.1:63124591-63124610 | None:intergenic | 20.0% |
| !!! | GTTTTGAATTGAGATAATTT+TGG | + | chr5.1:63124763-63124782 | MS.gene32489:intron | 20.0% |
| !!! | TATAACATTACTTGATTTGA+TGG | + | chr5.1:63127929-63127948 | MS.gene32489:intron | 20.0% |
| !!! | TATAATTTTTGCAGATTCAA+GGG | + | chr5.1:63125518-63125537 | MS.gene32489:intron | 20.0% |
| !!! | TTATAATTTTTGCAGATTCA+AGG | + | chr5.1:63125517-63125536 | MS.gene32489:intron | 20.0% |
| !!! | TTTGAATTGAGATAATTTTG+GGG | + | chr5.1:63124765-63124784 | MS.gene32489:intron | 20.0% |
| ! | AAAACATACTATTGCTGTAT+TGG | - | chr5.1:63127564-63127583 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAATATCTGTAG+TGG | + | chr5.1:63126890-63126909 | MS.gene32489:intron | 25.0% |
| ! | AATAAGGTAAAAATGGTATG+TGG | + | chr5.1:63125001-63125020 | MS.gene32489:intron | 25.0% |
| ! | ACATCAAAAGGTAAATTATC+AGG | - | chr5.1:63126701-63126720 | None:intergenic | 25.0% |
| ! | ATAAGGTAAAAATGGTATGT+GGG | + | chr5.1:63125002-63125021 | MS.gene32489:intron | 25.0% |
| ! | ATAATAACATCATACCAAGA+GGG | - | chr5.1:63126258-63126277 | None:intergenic | 25.0% |
| ! | GATAAGTTGTTTATCCAAAT+AGG | + | chr5.1:63125242-63125261 | MS.gene32489:intron | 25.0% |
| ! | GCCATTTGAAAATTTAGTAA+GGG | + | chr5.1:63127005-63127024 | MS.gene32489:intron | 25.0% |
| ! | TAAAAGTTAACAGAAGAGTA+AGG | - | chr5.1:63125667-63125686 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCAAAAC+AGG | + | chr5.1:63125303-63125322 | MS.gene32489:intron | 25.0% |
| ! | TGACAATTTCATTTATCCAT+TGG | - | chr5.1:63127410-63127429 | None:intergenic | 25.0% |
| ! | TTACAAGAAGGTAAGAATAT+TGG | + | chr5.1:63125699-63125718 | MS.gene32489:intron | 25.0% |
| ! | TTAGCGAGTTTATGAAAATA+AGG | + | chr5.1:63124985-63125004 | MS.gene32489:intron | 25.0% |
| !! | AATCACAATTTTCTTCGTTT+AGG | - | chr5.1:63127355-63127374 | None:intergenic | 25.0% |
| !! | ACGAATTTTACTTACTATAG+AGG | + | chr5.1:63126161-63126180 | MS.gene32489:CDS | 25.0% |
| !! | ATATGGTTTTCTTTCTTTGA+AGG | - | chr5.1:63127459-63127478 | None:intergenic | 25.0% |
| !! | CATCCTCTTAATTTCAATTT+TGG | + | chr5.1:63126009-63126028 | MS.gene32489:intron | 25.0% |
| !! | GATCTTTGTATACATTTTGT+TGG | + | chr5.1:63125847-63125866 | MS.gene32489:CDS | 25.0% |
| !! | TATAATTTTTGTCACTGTGT+TGG | + | chr5.1:63125383-63125402 | MS.gene32489:intron | 25.0% |
| !! | TCCCTTACTAAATTTTCAAA+TGG | - | chr5.1:63127009-63127028 | None:intergenic | 25.0% |
| !! | TGCCATTTGAAAATTTAGTA+AGG | + | chr5.1:63127004-63127023 | MS.gene32489:intron | 25.0% |
| !! | TTTACTTACTATAGAGGTAT+TGG | + | chr5.1:63126167-63126186 | MS.gene32489:CDS | 25.0% |
| !! | TTTTGATGTTTCTTGCAATT+GGG | + | chr5.1:63126712-63126731 | MS.gene32489:intron | 25.0% |
| !!! | TATGATTAGATTTCTGGTTT+TGG | + | chr5.1:63127882-63127901 | MS.gene32489:intron | 25.0% |
| AACAACAACAGTTGAATCAT+CGG | - | chr5.1:63126531-63126550 | None:intergenic | 30.0% | |
| AAGCATATATTCCTTTCTTG+TGG | + | chr5.1:63126295-63126314 | MS.gene32489:intron | 30.0% | |
| ACTGTTATCATTAGCTATCT+TGG | - | chr5.1:63125120-63125139 | None:intergenic | 30.0% | |
| ATAAAATAACAACTCCATCC+CGG | - | chr5.1:63126983-63127002 | None:intergenic | 30.0% | |
| ATGAATTAGAGGAAAATCAG+TGG | - | chr5.1:63126456-63126475 | None:intergenic | 30.0% | |
| ATGGTGCATTTCACATAAAA+AGG | + | chr5.1:63127948-63127967 | MS.gene32489:intron | 30.0% | |
| ATTCTAATGTTGCAACTTTG+AGG | + | chr5.1:63125545-63125564 | MS.gene32489:CDS | 30.0% | |
| ATTTCACATAAAAAGGGATC+AGG | + | chr5.1:63127955-63127974 | MS.gene32489:intron | 30.0% | |
| CAAGAAATGACATTATGTGA+CGG | - | chr5.1:63127155-63127174 | None:intergenic | 30.0% | |
| CAATTGCAAGAAACATCAAA+AGG | - | chr5.1:63126713-63126732 | None:intergenic | 30.0% | |
| GATAATAACATCATACCAAG+AGG | - | chr5.1:63126259-63126278 | None:intergenic | 30.0% | |
| GTACATTCAAGCATATATTC+CGG | + | chr5.1:63128132-63128151 | MS.gene32489:CDS | 30.0% | |
| TAACAGAAGAGTAAGGTAAA+CGG | - | chr5.1:63125660-63125679 | None:intergenic | 30.0% | |
| TATCAATATCAATTGGATGG+TGG | + | chr5.1:63127481-63127500 | MS.gene32489:intron | 30.0% | |
| TCAAGAATAATCCATGAAGA+GGG | + | chr5.1:63125592-63125611 | MS.gene32489:CDS | 30.0% | |
| TCATAACTCATAAGCTGTTT+GGG | + | chr5.1:63125029-63125048 | MS.gene32489:intron | 30.0% | |
| TGCTTTACAAACAATTGTCA+AGG | + | chr5.1:63126193-63126212 | MS.gene32489:CDS | 30.0% | |
| TGGTGCATTTCACATAAAAA+GGG | + | chr5.1:63127949-63127968 | MS.gene32489:intron | 30.0% | |
| TTCAAGAATAATCCATGAAG+AGG | + | chr5.1:63125591-63125610 | MS.gene32489:CDS | 30.0% | |
| TTCTATTGACACTAACTACT+TGG | + | chr5.1:63127521-63127540 | MS.gene32489:intron | 30.0% | |
| TTTGATGTTTCTTGCAATTG+GGG | + | chr5.1:63126713-63126732 | MS.gene32489:intron | 30.0% | |
| ! | CTCTCGAATTTCGATAATTT+TGG | + | chr5.1:63125340-63125359 | MS.gene32489:intron | 30.0% |
| ! | CTTTGTATACATTTTGTTGG+TGG | + | chr5.1:63125850-63125869 | MS.gene32489:CDS | 30.0% |
| ! | CTTTTGATGTTTCTTGCAAT+TGG | + | chr5.1:63126711-63126730 | MS.gene32489:intron | 30.0% |
| ! | GGAATATATGCTTTGAGTAA+TGG | - | chr5.1:63126288-63126307 | None:intergenic | 30.0% |
| ! | TCAACAGGTTAGTTATCAAA+AGG | + | chr5.1:63126587-63126606 | MS.gene32489:intron | 30.0% |
| ! | TCTTGATTGTTGAACTTTTG+AGG | + | chr5.1:63126655-63126674 | MS.gene32489:intron | 30.0% |
| ! | TTGGGGTTTGTATATTCTTT+TGG | + | chr5.1:63126730-63126749 | MS.gene32489:intron | 30.0% |
| !! | TTGATATGCACTTTTGTTGT+CGG | + | chr5.1:63125735-63125754 | MS.gene32489:intron | 30.0% |
| !!! | TTTTGGAATTAGTTCTCACT+GGG | + | chr5.1:63127899-63127918 | MS.gene32489:intron | 30.0% |
| AACAATGATTGAGAGAGAGA+TGG | + | chr5.1:63125419-63125438 | MS.gene32489:intron | 35.0% | |
| ACAAACAATTGTCAAGGAAG+AGG | + | chr5.1:63126199-63126218 | MS.gene32489:CDS | 35.0% | |
| ATAAAACAAATGCCTACACC+AGG | - | chr5.1:63128215-63128234 | None:intergenic | 35.0% | |
| ATGAACCTATATCATTCCCT+CGG | + | chr5.1:63127176-63127195 | MS.gene32489:intron | 35.0% | |
| CAAACAATTGTCAAGGAAGA+GGG | + | chr5.1:63126200-63126219 | MS.gene32489:CDS | 35.0% | |
| CAAGAATAATCCATGAAGAG+GGG | + | chr5.1:63125593-63125612 | MS.gene32489:CDS | 35.0% | |
| CACTGGACAATTACATTTAC+AGG | - | chr5.1:63127782-63127801 | None:intergenic | 35.0% | |
| CAGGTAAAATTCCTCTGTAA+AGG | - | chr5.1:63128175-63128194 | None:intergenic | 35.0% | |
| CGATCTCAAGCTTTCATATA+CGG | - | chr5.1:63126380-63126399 | None:intergenic | 35.0% | |
| GAAATAGTTCCAATCTGTTG+CGG | - | chr5.1:63124496-63124515 | None:intergenic | 35.0% | |
| GAGAAGCTGATTGCTATATT+TGG | - | chr5.1:63126358-63126377 | None:intergenic | 35.0% | |
| GTCATAACTCATAAGCTGTT+TGG | + | chr5.1:63125028-63125047 | MS.gene32489:intron | 35.0% | |
| GTCCATTTGACAACAAATTG+CGG | + | chr5.1:63127706-63127725 | MS.gene32489:intron | 35.0% | |
| GTTGTCAAATGGACAAGATA+TGG | - | chr5.1:63127700-63127719 | None:intergenic | 35.0% | |
| TAAATGTAATTGTCCAGTGC+AGG | + | chr5.1:63127783-63127802 | MS.gene32489:intron | 35.0% | |
| TAACAGATGAATTCAACCGT+AGG | - | chr5.1:63128010-63128029 | None:intergenic | 35.0% | |
| TAGTTCCAAGTCCCTTATAA+AGG | - | chr5.1:63126235-63126254 | None:intergenic | 35.0% | |
| TCTCTATTACTTTGCAGTTG+CGG | - | chr5.1:63125814-63125833 | None:intergenic | 35.0% | |
| TGTAAGACTATGACCCTATT+TGG | - | chr5.1:63125259-63125278 | None:intergenic | 35.0% | |
| TTCCATTGGATCTTGTTAGA+CGG | + | chr5.1:63128051-63128070 | MS.gene32489:CDS | 35.0% | |
| TTCTTACGAGCATTACAAGA+AGG | + | chr5.1:63125687-63125706 | MS.gene32489:CDS | 35.0% | |
| TTGCTCATGATAAAAGCCAA+TGG | + | chr5.1:63127391-63127410 | MS.gene32489:intron | 35.0% | |
| ! | ACAAGTTTTACTCAAAGCTC+CGG | - | chr5.1:63124542-63124561 | None:intergenic | 35.0% |
| ! | ATGAAAGCTTGAGATCGTTT+TGG | + | chr5.1:63126383-63126402 | MS.gene32489:CDS | 35.0% |
| ! | CGTCACATAATGTCATTTCT+TGG | + | chr5.1:63127153-63127172 | MS.gene32489:intron | 35.0% |
| ! | TACTTGTTCACATGTTTCTG+AGG | + | chr5.1:63127289-63127308 | MS.gene32489:intron | 35.0% |
| ! | TAGACTCACAATCCTTTTTC+AGG | + | chr5.1:63124576-63124595 | MS.gene32489:CDS | 35.0% |
| ! | TTACCTTTTTCCTACATCTC+TGG | + | chr5.1:63126756-63126775 | MS.gene32489:intron | 35.0% |
| ! | TTCAACTGTTGTTGTTAGTC+TGG | + | chr5.1:63126535-63126554 | MS.gene32489:CDS | 35.0% |
| ! | TTTGGAATTAGTTCTCACTG+GGG | + | chr5.1:63127900-63127919 | MS.gene32489:intron | 35.0% |
| ! | TTTTATACGTGCAGTTTCTG+AGG | + | chr5.1:63125782-63125801 | MS.gene32489:intron | 35.0% |
| !! | GATAATTTTGGGGACTGAAT+TGG | + | chr5.1:63124775-63124794 | MS.gene32489:intron | 35.0% |
| !! | GGTTGTTGCTTATGATTTTG+TGG | + | chr5.1:63124796-63124815 | MS.gene32489:intron | 35.0% |
| !! | TCACACTTTTCCTGTTTTTC+AGG | + | chr5.1:63127040-63127059 | MS.gene32489:intron | 35.0% |
| !! | TGTATACATTTTGTTGGTGG+TGG | + | chr5.1:63125853-63125872 | MS.gene32489:CDS | 35.0% |
| !! | TTTTGGAAACTTGCAAGACT+TGG | + | chr5.1:63126026-63126045 | MS.gene32489:intron | 35.0% |
| !!! | GTATACATTTTGTTGGTGGT+GGG | + | chr5.1:63125854-63125873 | MS.gene32489:CDS | 35.0% |
| !!! | GTTTTGGAATTAGTTCTCAC+TGG | + | chr5.1:63127898-63127917 | MS.gene32489:intron | 35.0% |
| AACAGTTGAATCATCGGATC+TGG | - | chr5.1:63126525-63126544 | None:intergenic | 40.0% | |
| AACCATCTTCAGTGTCTCAT+AGG | - | chr5.1:63128240-63128259 | None:intergenic | 40.0% | |
| AAGCATATATTCCGGTCAGA+AGG | + | chr5.1:63128140-63128159 | MS.gene32489:CDS | 40.0% | |
| AATCCATGAAGAGGGGTTTA+GGG | + | chr5.1:63125600-63125619 | MS.gene32489:CDS | 40.0% | |
| AATGATTGAGAGAGAGATGG+TGG | + | chr5.1:63125422-63125441 | MS.gene32489:intron | 40.0% | |
| ACATACAGTTGTTGTAGCAG+TGG | - | chr5.1:63127591-63127610 | None:intergenic | 40.0% | |
| AGAGACCTGTATTGTACACA+CGG | - | chr5.1:63128109-63128128 | None:intergenic | 40.0% | |
| AGTCAATCAAAACAGGCACT+AGG | + | chr5.1:63125310-63125329 | MS.gene32489:intron | 40.0% | |
| ATACTTGATGCCAGAGATGT+AGG | - | chr5.1:63126769-63126788 | None:intergenic | 40.0% | |
| ATATGCAGCAACGTTTCCAT+TGG | + | chr5.1:63128037-63128056 | MS.gene32489:intron | 40.0% | |
| ATGATTGAGAGAGAGATGGT+GGG | + | chr5.1:63125423-63125442 | MS.gene32489:intron | 40.0% | |
| ATGCCAGAGATGTAGGAAAA+AGG | - | chr5.1:63126762-63126781 | None:intergenic | 40.0% | |
| CTTGTAGACTAGAATGCCTA+CGG | + | chr5.1:63127991-63128010 | MS.gene32489:intron | 40.0% | |
| GAATACTATAAGGTTGTGCC+TGG | + | chr5.1:63128194-63128213 | MS.gene32489:CDS | 40.0% | |
| GCTACAACAACTGTATGTTC+AGG | + | chr5.1:63127593-63127612 | MS.gene32489:intron | 40.0% | |
| GGATTACTCGGCCTTTATAA+GGG | + | chr5.1:63126221-63126240 | MS.gene32489:CDS | 40.0% | |
| GGCACAACCTTATAGTATTC+AGG | - | chr5.1:63128194-63128213 | None:intergenic | 40.0% | |
| GTGTACAATACAGGTCTCTT+TGG | + | chr5.1:63128110-63128129 | MS.gene32489:CDS | 40.0% | |
| TAAGAAAGACAGCACTACAC+AGG | - | chr5.1:63127752-63127771 | None:intergenic | 40.0% | |
| TAATCCATGAAGAGGGGTTT+AGG | + | chr5.1:63125599-63125618 | MS.gene32489:CDS | 40.0% | |
| TGCTACATCTACTTATCCCT+TGG | + | chr5.1:63125894-63125913 | MS.gene32489:CDS | 40.0% | |
| TGTGTAGTGCTGTCTTTCTT+AGG | + | chr5.1:63127751-63127770 | MS.gene32489:intron | 40.0% | |
| ! | CTTTGAGGAAAGCGAGTATA+TGG | + | chr5.1:63125560-63125579 | MS.gene32489:CDS | 40.0% |
| ! | TCAAAACAGGCACTAGGTTT+TGG | + | chr5.1:63125316-63125335 | MS.gene32489:intron | 40.0% |
| !! | CTCCGCAATTTGTTGTCAAA+TGG | - | chr5.1:63127711-63127730 | None:intergenic | 40.0% |
| !! | GATCGTTTTGGATGTCAAAC+AGG | + | chr5.1:63126395-63126414 | MS.gene32489:CDS | 40.0% |
| !! | GGTTTAGGGCTTTTTGGAAA+GGG | + | chr5.1:63125614-63125633 | MS.gene32489:CDS | 40.0% |
| !!! | GACACTGAAGATGGTTTTAG+CGG | + | chr5.1:63128244-63128263 | MS.gene32489:CDS | 40.0% |
| AAGAGGACACCTCTCACATT+TGG | - | chr5.1:63127205-63127224 | None:intergenic | 45.0% | |
| ACATCAGGTGAAGGTAACCT+AGG | - | chr5.1:63127244-63127263 | None:intergenic | 45.0% | |
| ACCTTCACCTGATGTTTGGA+CGG | + | chr5.1:63127249-63127268 | MS.gene32489:intron | 45.0% | |
| ACGGAATCAGCTGCATAACT+TGG | - | chr5.1:63127136-63127155 | None:intergenic | 45.0% | |
| AGGATTGTGAGTCTAGCAAG+TGG | - | chr5.1:63124571-63124590 | None:intergenic | 45.0% | |
| AGTGGCTAAGTCCACAAGAA+AGG | - | chr5.1:63126309-63126328 | None:intergenic | 45.0% | |
| ATAGTTCCAATCTGTTGCGG+CGG | - | chr5.1:63124493-63124512 | None:intergenic | 45.0% | |
| CAACAACTGTATGTTCAGGC+AGG | + | chr5.1:63127597-63127616 | MS.gene32489:intron | 45.0% | |
| CATTGGATCTTGTTAGACGG+AGG | + | chr5.1:63128054-63128073 | MS.gene32489:CDS | 45.0% | |
| CCTTGGATCTTGTAAGAACG+CGG | + | chr5.1:63125911-63125930 | MS.gene32489:CDS | 45.0% | |
| CGCGTTCTTACAAGATCCAA+GGG | - | chr5.1:63125913-63125932 | None:intergenic | 45.0% | |
| CGGAATCAGCTGCATAACTT+GGG | - | chr5.1:63127135-63127154 | None:intergenic | 45.0% | |
| CTCCGTCTAACAAGATCCAA+TGG | - | chr5.1:63128056-63128075 | None:intergenic | 45.0% | |
| CTGATATCCGTCCAAACATC+AGG | - | chr5.1:63127259-63127278 | None:intergenic | 45.0% | |
| GACCTATGAGACACTGAAGA+TGG | + | chr5.1:63128235-63128254 | MS.gene32489:CDS | 45.0% | |
| GAGACCTGTATTGTACACAC+GGG | - | chr5.1:63128108-63128127 | None:intergenic | 45.0% | |
| GGAATCAGCTGCATAACTTG+GGG | - | chr5.1:63127134-63127153 | None:intergenic | 45.0% | |
| GGGATTACTCGGCCTTTATA+AGG | + | chr5.1:63126220-63126239 | MS.gene32489:CDS | 45.0% | |
| GGTAACCGAGGGAATGATAT+AGG | - | chr5.1:63127184-63127203 | None:intergenic | 45.0% | |
| GGTTACCTTCACCTGATGTT+TGG | + | chr5.1:63127245-63127264 | MS.gene32489:intron | 45.0% | |
| GTCAAGGAAGAGGGATTACT+CGG | + | chr5.1:63126209-63126228 | MS.gene32489:CDS | 45.0% | |
| TATAAGGTTGTGCCTGGTGT+AGG | + | chr5.1:63128200-63128219 | MS.gene32489:CDS | 45.0% | |
| TCTGCATTAGCACCAGTAAG+TGG | - | chr5.1:63126327-63126346 | None:intergenic | 45.0% | |
| TGATTGAGAGAGAGATGGTG+GGG | + | chr5.1:63125424-63125443 | MS.gene32489:intron | 45.0% | |
| TTGAGGTATGCTTCTCACCT+AGG | + | chr5.1:63127224-63127243 | MS.gene32489:intron | 45.0% | |
| TTGTGGACTTAGCCACTTAC+TGG | + | chr5.1:63126312-63126331 | MS.gene32489:intron | 45.0% | |
| ! | ACTATTTCTCAGCTTCTCGC+CGG | + | chr5.1:63124508-63124527 | MS.gene32489:CDS | 45.0% |
| ! | CTCTCACATTTGGTAACCGA+GGG | - | chr5.1:63127195-63127214 | None:intergenic | 45.0% |
| ! | GTGAGAAGCATACCTCAAAG+AGG | - | chr5.1:63127222-63127241 | None:intergenic | 45.0% |
| ! | GTTGTTGTTAGTCTGGCTTG+TGG | + | chr5.1:63126542-63126561 | MS.gene32489:CDS | 45.0% |
| ! | TCAGGCATTGCATCATCAAC+AGG | + | chr5.1:63126572-63126591 | MS.gene32489:CDS | 45.0% |
| ! | TGGTGCTAATGCAGACTGTT+GGG | + | chr5.1:63126332-63126351 | MS.gene32489:intron | 45.0% |
| !! | AAGAGGGGTTTAGGGCTTTT+TGG | + | chr5.1:63125608-63125627 | MS.gene32489:CDS | 45.0% |
| !! | GGGTTTAGGGCTTTTTGGAA+AGG | + | chr5.1:63125613-63125632 | MS.gene32489:CDS | 45.0% |
| !!! | ACATTTTGTTGGTGGTGGGT+TGG | + | chr5.1:63125858-63125877 | MS.gene32489:CDS | 45.0% |
| AAGCCCTAAACCCCTCTTCA+TGG | - | chr5.1:63125606-63125625 | None:intergenic | 50.0% | |
| ACAAAGTTGCAAGCCTGCAC+TGG | - | chr5.1:63127799-63127818 | None:intergenic | 50.0% | |
| ACAAATTGCGGAGAGTCTCG+TGG | + | chr5.1:63127718-63127737 | MS.gene32489:intron | 50.0% | |
| AGACGGAGGAAGCAACTTGA+GGG | + | chr5.1:63128068-63128087 | MS.gene32489:CDS | 50.0% | |
| ATGCAAACGGAAGCTAGGGT+TGG | + | chr5.1:63124421-63124440 | MS.gene32489:CDS | 50.0% | |
| CCGCGTTCTTACAAGATCCA+AGG | - | chr5.1:63125914-63125933 | None:intergenic | 50.0% | |
| CCTCGGTTACCAAATGTGAG+AGG | + | chr5.1:63127193-63127212 | MS.gene32489:intron | 50.0% | |
| CTCGGCCTTTATAAGGGACT+TGG | + | chr5.1:63126227-63126246 | MS.gene32489:CDS | 50.0% | |
| TAGACGGAGGAAGCAACTTG+AGG | + | chr5.1:63128067-63128086 | MS.gene32489:CDS | 50.0% | |
| TCCGTCCAAACATCAGGTGA+AGG | - | chr5.1:63127253-63127272 | None:intergenic | 50.0% | |
| TGTATGTTCAGGCAGGCTTG+TGG | + | chr5.1:63127604-63127623 | MS.gene32489:intron | 50.0% | |
| ! | CCTCTCACATTTGGTAACCG+AGG | - | chr5.1:63127196-63127215 | None:intergenic | 50.0% |
| ! | CTGGTGCTAATGCAGACTGT+TGG | + | chr5.1:63126331-63126350 | MS.gene32489:intron | 50.0% |
| ! | GATTGAGAGAGAGATGGTGG+GGG | + | chr5.1:63125425-63125444 | MS.gene32489:intron | 50.0% |
| !! | GGAAGCTAGGGTTGGTGTAA+CGG | + | chr5.1:63124429-63124448 | MS.gene32489:CDS | 50.0% |
| !! | TGTGAGAGGTGTCCTCTTTG+AGG | + | chr5.1:63127207-63127226 | MS.gene32489:intron | 50.0% |
| AACAACTCCATCCCGGTCTC+TGG | - | chr5.1:63126976-63126995 | None:intergenic | 55.0% | |
| ACGGAGGAAGCAACTTGAGG+GGG | + | chr5.1:63128070-63128089 | MS.gene32489:CDS | 55.0% | |
| ATTTCTCAGCTTCTCGCCGG+AGG | + | chr5.1:63124511-63124530 | MS.gene32489:CDS | 55.0% | |
| CGAGCCCGTGTGTACAATAC+AGG | + | chr5.1:63128101-63128120 | MS.gene32489:CDS | 55.0% | |
| GACGGAGGAAGCAACTTGAG+GGG | + | chr5.1:63128069-63128088 | MS.gene32489:CDS | 55.0% | |
| GGGACTTGGAACTACCCTCT+TGG | + | chr5.1:63126241-63126260 | MS.gene32489:CDS | 55.0% | |
| GGTTTGCGTGGCCTTTACAG+AGG | + | chr5.1:63128161-63128180 | MS.gene32489:CDS | 55.0% | |
| TAACGGTGGACGGTGGTGTT+CGG | + | chr5.1:63124446-63124465 | MS.gene32489:CDS | 55.0% | |
| TGACCCCTAGAACCAGAGAC+CGG | + | chr5.1:63126961-63126980 | MS.gene32489:intron | 55.0% | |
| TTCCGGTCAGAAGGTTTGCG+TGG | + | chr5.1:63128149-63128168 | MS.gene32489:CDS | 55.0% | |
| ! | CTGGCTTGTGGCAGTCTTTC+AGG | + | chr5.1:63126554-63126573 | MS.gene32489:CDS | 55.0% |
| ! | GGTGGGGGTACAGGTTATTG+AGG | + | chr5.1:63125440-63125459 | MS.gene32489:intron | 55.0% |
| !! | AGCTAGGGTTGGTGTAACGG+TGG | + | chr5.1:63124432-63124451 | MS.gene32489:CDS | 55.0% |
| !! | AGGGTTGGTGTAACGGTGGA+CGG | + | chr5.1:63124436-63124455 | MS.gene32489:CDS | 55.0% |
| !! | ATCCCGGTCTCTGGTTCTAG+GGG | - | chr5.1:63126967-63126986 | None:intergenic | 55.0% |
| !! | CATCCCGGTCTCTGGTTCTA+GGG | - | chr5.1:63126968-63126987 | None:intergenic | 55.0% |
| !! | TCTGGTTCTAGGGGTCAGTC+TGG | - | chr5.1:63126958-63126977 | None:intergenic | 55.0% |
| !! | TTTGTTGGTGGTGGGTTGGC+AGG | + | chr5.1:63125862-63125881 | MS.gene32489:CDS | 55.0% |
| AAGCAACTTGAGGGGGCTGG+TGG | + | chr5.1:63128077-63128096 | MS.gene32489:CDS | 60.0% | |
| AGGAAGCAACTTGAGGGGGC+TGG | + | chr5.1:63128074-63128093 | MS.gene32489:CDS | 60.0% | |
| CAAAGCTCCGGCAACTCCTC+CGG | - | chr5.1:63124530-63124549 | None:intergenic | 60.0% | |
| CAACCACCGCCGCAACAGAT+TGG | + | chr5.1:63124484-63124503 | MS.gene32489:CDS | 60.0% | |
| CCTAGAACCAGAGACCGGGA+TGG | + | chr5.1:63126966-63126985 | MS.gene32489:intron | 60.0% | |
| GACCCCTAGAACCAGAGACC+GGG | + | chr5.1:63126962-63126981 | MS.gene32489:intron | 60.0% | |
| GGCCACGCAAACCTTCTGAC+CGG | - | chr5.1:63128154-63128173 | None:intergenic | 60.0% | |
| GTTCCAATCTGTTGCGGCGG+TGG | - | chr5.1:63124490-63124509 | None:intergenic | 60.0% | |
| GTTGGTGTAACGGTGGACGG+TGG | + | chr5.1:63124439-63124458 | MS.gene32489:CDS | 60.0% | |
| ! | AGCAACTTGAGGGGGCTGGT+GGG | + | chr5.1:63128078-63128097 | MS.gene32489:CDS | 60.0% |
| !! | AAGAACGCGGCTTGCTGCAC+AGG | + | chr5.1:63125924-63125943 | MS.gene32489:CDS | 60.0% |
| !! | CCATCCCGGTCTCTGGTTCT+AGG | - | chr5.1:63126969-63126988 | None:intergenic | 60.0% |
| !! | GAGAGAGATGGTGGGGGTAC+AGG | + | chr5.1:63125431-63125450 | MS.gene32489:intron | 60.0% |
| CTTCTCGCCGGAGGAGTTGC+CGG | + | chr5.1:63124520-63124539 | MS.gene32489:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 63124421 | 63128283 | 63124421 | ID=MS.gene32489 |
| chr5.1 | mRNA | 63124421 | 63128283 | 63124421 | ID=MS.gene32489.t1;Parent=MS.gene32489 |
| chr5.1 | exon | 63124421 | 63124597 | 63124421 | ID=MS.gene32489.t1.exon1;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63124421 | 63124597 | 63124421 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| chr5.1 | exon | 63125532 | 63125708 | 63125532 | ID=MS.gene32489.t1.exon2;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63125532 | 63125708 | 63125532 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| chr5.1 | exon | 63125796 | 63125945 | 63125796 | ID=MS.gene32489.t1.exon3;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63125796 | 63125945 | 63125796 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| chr5.1 | exon | 63126161 | 63126262 | 63126161 | ID=MS.gene32489.t1.exon4;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63126161 | 63126262 | 63126161 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| chr5.1 | exon | 63126346 | 63126416 | 63126346 | ID=MS.gene32489.t1.exon5;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63126346 | 63126416 | 63126346 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| chr5.1 | exon | 63126526 | 63126593 | 63126526 | ID=MS.gene32489.t1.exon6;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63126526 | 63126593 | 63126526 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| chr5.1 | exon | 63128045 | 63128283 | 63128045 | ID=MS.gene32489.t1.exon7;Parent=MS.gene32489.t1 |
| chr5.1 | CDS | 63128045 | 63128283 | 63128045 | ID=cds.MS.gene32489.t1;Parent=MS.gene32489.t1 |
| Gene Sequence |
| Protein sequence |
