Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50108.t1 | XP_003616506.2 | 100 | 327 | 0 | 0 | 1 | 327 | 1 | 327 | 2.50E-182 | 647.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50108.t1 | Q54MZ4 | 41.1 | 299 | 166 | 4 | 25 | 321 | 133 | 423 | 9.7e-58 | 225.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50108.t1 | G7K211 | 100.0 | 327 | 0 | 0 | 1 | 327 | 1 | 327 | 1.8e-182 | 647.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04991 | MS.gene50108 | -0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene50108 | 0.803804 | 2.93E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene50108 | 0.816874 | 4.42E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene50108 | 0.818265 | 2.14E-52 | -1.69E-46 |
| MS.gene055505 | MS.gene50108 | 0.851081 | 1.12E-60 | -1.69E-46 |
| MS.gene060084 | MS.gene50108 | 0.850371 | 1.77E-60 | -1.69E-46 |
| MS.gene060940 | MS.gene50108 | 0.803812 | 2.92E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030289 | MS.gene50108 | PPI |
| MS.gene034290 | MS.gene50108 | PPI |
| MS.gene066511 | MS.gene50108 | PPI |
| MS.gene064047 | MS.gene50108 | PPI |
| MS.gene50108 | MS.gene074632 | PPI |
| MS.gene064043 | MS.gene50108 | PPI |
| MS.gene074631 | MS.gene50108 | PPI |
| MS.gene046369 | MS.gene50108 | PPI |
| MS.gene32803 | MS.gene50108 | PPI |
| MS.gene052972 | MS.gene50108 | PPI |
| MS.gene37414 | MS.gene50108 | PPI |
| MS.gene66338 | MS.gene50108 | PPI |
| MS.gene59586 | MS.gene50108 | PPI |
| MS.gene015005 | MS.gene50108 | PPI |
| MS.gene75068 | MS.gene50108 | PPI |
| MS.gene95300 | MS.gene50108 | PPI |
| MS.gene064041 | MS.gene50108 | PPI |
| MS.gene79746 | MS.gene50108 | PPI |
| MS.gene98135 | MS.gene50108 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50108.t1 | MTR_5g081150 | 100.000 | 327 | 0 | 0 | 1 | 327 | 1 | 327 | 0.0 | 671 |
| MS.gene50108.t1 | MTR_5g081150 | 97.276 | 257 | 7 | 0 | 1 | 257 | 1 | 257 | 0.0 | 509 |
| MS.gene50108.t1 | MTR_5g081150 | 100.000 | 248 | 0 | 0 | 1 | 248 | 1 | 248 | 0.0 | 508 |
| MS.gene50108.t1 | MTR_7g064980 | 70.625 | 320 | 87 | 3 | 7 | 323 | 1 | 316 | 5.44e-162 | 454 |
| MS.gene50108.t1 | MTR_7g064980 | 28.571 | 203 | 121 | 6 | 33 | 227 | 133 | 319 | 2.56e-13 | 70.1 |
| MS.gene50108.t1 | MTR_5g009500 | 38.318 | 321 | 170 | 7 | 22 | 321 | 25 | 338 | 8.01e-63 | 203 |
| MS.gene50108.t1 | MTR_8g027975 | 35.276 | 326 | 187 | 6 | 16 | 321 | 32 | 353 | 1.29e-60 | 198 |
| MS.gene50108.t1 | MTR_6g091800 | 33.333 | 303 | 174 | 5 | 33 | 321 | 18 | 306 | 1.64e-48 | 165 |
| MS.gene50108.t1 | MTR_6g091800 | 31.472 | 197 | 119 | 5 | 140 | 323 | 18 | 211 | 9.40e-19 | 85.5 |
| MS.gene50108.t1 | MTR_6g091800 | 28.070 | 228 | 139 | 7 | 16 | 229 | 97 | 313 | 9.81e-17 | 79.7 |
| MS.gene50108.t1 | MTR_3g104600 | 33.228 | 316 | 168 | 8 | 31 | 321 | 32 | 329 | 1.02e-47 | 164 |
| MS.gene50108.t1 | MTR_3g104600 | 30.841 | 214 | 129 | 3 | 129 | 323 | 19 | 232 | 9.69e-24 | 100 |
| MS.gene50108.t1 | MTR_6g091800 | 30.887 | 327 | 174 | 5 | 33 | 321 | 18 | 330 | 1.26e-45 | 158 |
| MS.gene50108.t1 | MTR_4g119770 | 31.325 | 332 | 196 | 9 | 22 | 325 | 2 | 329 | 1.09e-44 | 155 |
| MS.gene50108.t1 | MTR_3g098460 | 33.447 | 293 | 173 | 9 | 34 | 321 | 205 | 480 | 4.18e-44 | 157 |
| MS.gene50108.t1 | MTR_3g098460 | 29.958 | 237 | 141 | 7 | 92 | 318 | 157 | 378 | 6.04e-23 | 99.4 |
| MS.gene50108.t1 | MTR_3g098460 | 32.500 | 200 | 116 | 5 | 27 | 220 | 292 | 478 | 1.39e-19 | 89.4 |
| MS.gene50108.t1 | MTR_7g068340 | 33.096 | 281 | 164 | 7 | 45 | 322 | 98 | 357 | 5.88e-43 | 152 |
| MS.gene50108.t1 | MTR_7g068340 | 28.492 | 179 | 110 | 6 | 153 | 323 | 99 | 267 | 5.88e-11 | 63.2 |
| MS.gene50108.t1 | MTR_7g084400 | 33.557 | 298 | 163 | 9 | 34 | 321 | 213 | 485 | 2.21e-42 | 153 |
| MS.gene50108.t1 | MTR_7g084400 | 32.323 | 198 | 114 | 5 | 27 | 220 | 302 | 483 | 1.60e-22 | 98.2 |
| MS.gene50108.t1 | MTR_7g084400 | 33.152 | 184 | 111 | 4 | 140 | 318 | 212 | 388 | 1.35e-21 | 95.5 |
| MS.gene50108.t1 | MTR_3g107510 | 32.803 | 314 | 186 | 9 | 12 | 323 | 105 | 395 | 5.74e-42 | 150 |
| MS.gene50108.t1 | MTR_3g107510 | 29.224 | 219 | 137 | 6 | 15 | 229 | 196 | 400 | 1.13e-21 | 95.1 |
| MS.gene50108.t1 | MTR_3g107510 | 29.412 | 187 | 113 | 5 | 144 | 324 | 125 | 298 | 4.61e-17 | 81.6 |
| MS.gene50108.t1 | MTR_2g436930 | 30.915 | 317 | 189 | 9 | 36 | 326 | 17 | 329 | 1.65e-41 | 147 |
| MS.gene50108.t1 | MTR_2g436930 | 28.641 | 206 | 124 | 5 | 35 | 225 | 129 | 326 | 1.04e-16 | 80.1 |
| MS.gene50108.t1 | MTR_1g012030 | 33.220 | 295 | 175 | 9 | 30 | 321 | 135 | 410 | 3.46e-41 | 148 |
| MS.gene50108.t1 | MTR_1g012030 | 29.412 | 187 | 121 | 4 | 140 | 324 | 138 | 315 | 1.36e-19 | 89.4 |
| MS.gene50108.t1 | MTR_1g012030 | 28.708 | 209 | 131 | 6 | 15 | 219 | 213 | 407 | 9.19e-19 | 86.7 |
| MS.gene50108.t1 | MTR_8g096050 | 32.423 | 293 | 176 | 7 | 34 | 321 | 227 | 502 | 1.25e-40 | 149 |
| MS.gene50108.t1 | MTR_8g096050 | 34.239 | 184 | 111 | 5 | 140 | 320 | 226 | 402 | 4.48e-22 | 97.1 |
| MS.gene50108.t1 | MTR_8g096050 | 33.000 | 200 | 115 | 6 | 27 | 220 | 314 | 500 | 7.96e-21 | 93.2 |
| MS.gene50108.t1 | MTR_6g091800 | 34.836 | 244 | 131 | 5 | 33 | 262 | 18 | 247 | 1.38e-40 | 143 |
| MS.gene50108.t1 | MTR_6g091800 | 31.472 | 197 | 119 | 5 | 140 | 323 | 18 | 211 | 6.30e-19 | 85.5 |
| MS.gene50108.t1 | MTR_6g091800 | 34.836 | 244 | 131 | 5 | 33 | 262 | 18 | 247 | 2.31e-40 | 142 |
| MS.gene50108.t1 | MTR_6g091800 | 31.472 | 197 | 119 | 5 | 140 | 323 | 18 | 211 | 5.83e-19 | 85.5 |
| MS.gene50108.t1 | MTR_6g091800 | 30.097 | 309 | 164 | 5 | 33 | 303 | 18 | 312 | 5.03e-40 | 143 |
| MS.gene50108.t1 | MTR_4g114320 | 30.847 | 295 | 186 | 5 | 30 | 323 | 119 | 396 | 2.91e-39 | 143 |
| MS.gene50108.t1 | MTR_4g114320 | 29.302 | 215 | 131 | 7 | 19 | 226 | 198 | 398 | 3.67e-19 | 87.8 |
| MS.gene50108.t1 | MTR_6g091800 | 31.716 | 268 | 131 | 5 | 33 | 262 | 18 | 271 | 1.53e-37 | 136 |
| MS.gene50108.t1 | MTR_6g091800 | 31.716 | 268 | 131 | 5 | 33 | 262 | 18 | 271 | 2.36e-37 | 135 |
| MS.gene50108.t1 | MTR_6g034145 | 31.373 | 255 | 152 | 4 | 81 | 321 | 7 | 252 | 2.85e-36 | 131 |
| MS.gene50108.t1 | MTR_6g034145 | 27.632 | 228 | 140 | 7 | 16 | 229 | 43 | 259 | 3.18e-15 | 74.7 |
| MS.gene50108.t1 | MTR_6g034145 | 30.323 | 155 | 96 | 3 | 180 | 323 | 4 | 157 | 3.41e-14 | 71.6 |
| MS.gene50108.t1 | MTR_6g092210 | 31.325 | 249 | 154 | 4 | 81 | 321 | 7 | 246 | 1.81e-35 | 129 |
| MS.gene50108.t1 | MTR_6g092210 | 27.354 | 223 | 141 | 7 | 16 | 229 | 43 | 253 | 3.28e-14 | 71.6 |
| MS.gene50108.t1 | MTR_6g092210 | 28.859 | 149 | 100 | 3 | 180 | 323 | 4 | 151 | 1.71e-13 | 69.7 |
| MS.gene50108.t1 | MTR_4g016730 | 32.500 | 280 | 164 | 7 | 45 | 322 | 100 | 356 | 1.96e-35 | 132 |
| MS.gene50108.t1 | MTR_3g074490 | 30.476 | 315 | 175 | 7 | 29 | 321 | 111 | 403 | 5.47e-34 | 129 |
| MS.gene50108.t1 | MTR_3g104500 | 30.068 | 296 | 192 | 7 | 33 | 320 | 33 | 321 | 3.66e-33 | 125 |
| MS.gene50108.t1 | MTR_3g104500 | 24.771 | 218 | 141 | 6 | 125 | 323 | 14 | 227 | 1.44e-12 | 67.8 |
| MS.gene50108.t1 | MTR_4g119770 | 30.153 | 262 | 160 | 6 | 22 | 263 | 2 | 260 | 3.96e-31 | 118 |
| MS.gene50108.t1 | MTR_4g119770 | 30.000 | 200 | 116 | 5 | 139 | 318 | 12 | 207 | 1.11e-20 | 90.1 |
| MS.gene50108.t1 | MTR_8g090210 | 27.707 | 314 | 187 | 6 | 28 | 321 | 104 | 397 | 7.17e-30 | 117 |
| MS.gene50108.t1 | MTR_7g109135 | 30.640 | 297 | 181 | 9 | 36 | 321 | 24 | 306 | 8.51e-29 | 113 |
| MS.gene50108.t1 | MTR_7g109135 | 35.567 | 194 | 115 | 6 | 138 | 323 | 17 | 208 | 9.55e-20 | 88.6 |
| MS.gene50108.t1 | MTR_7g109135 | 31.351 | 185 | 116 | 6 | 48 | 229 | 137 | 313 | 2.14e-15 | 76.3 |
| MS.gene50108.t1 | MTR_6g091800 | 36.872 | 179 | 87 | 4 | 33 | 197 | 18 | 184 | 7.19e-28 | 107 |
| MS.gene50108.t1 | MTR_6g091800 | 31.765 | 170 | 100 | 5 | 140 | 296 | 18 | 184 | 4.34e-14 | 70.1 |
| MS.gene50108.t1 | MTR_4g005330 | 25.333 | 300 | 198 | 6 | 35 | 321 | 1 | 287 | 3.15e-27 | 108 |
| MS.gene50108.t1 | MTR_4g005330 | 25.000 | 304 | 202 | 6 | 31 | 321 | 63 | 353 | 4.53e-27 | 109 |
| MS.gene50108.t1 | MTR_2g436930 | 30.705 | 241 | 146 | 7 | 103 | 326 | 3 | 239 | 8.21e-27 | 106 |
| MS.gene50108.t1 | MTR_2g436930 | 28.641 | 206 | 124 | 5 | 35 | 225 | 39 | 236 | 5.33e-17 | 79.3 |
| MS.gene50108.t1 | MTR_5g055410 | 32.566 | 304 | 180 | 10 | 29 | 321 | 16 | 305 | 3.91e-26 | 106 |
| MS.gene50108.t1 | MTR_5g055410 | 34.118 | 170 | 107 | 4 | 157 | 323 | 37 | 204 | 3.49e-17 | 81.6 |
| MS.gene50108.t1 | MTR_3g028590 | 26.144 | 306 | 209 | 7 | 24 | 321 | 83 | 379 | 2.72e-25 | 105 |
| MS.gene50108.t1 | MTR_3g028590 | 26.144 | 306 | 209 | 7 | 24 | 321 | 87 | 383 | 3.20e-25 | 104 |
| MS.gene50108.t1 | MTR_6g091800 | 32.512 | 203 | 87 | 4 | 33 | 197 | 18 | 208 | 5.42e-25 | 100 |
| MS.gene50108.t1 | MTR_6g091800 | 34.959 | 123 | 75 | 3 | 140 | 259 | 18 | 138 | 5.20e-11 | 62.0 |
| MS.gene50108.t1 | MTR_7g109135 | 29.592 | 294 | 181 | 9 | 36 | 321 | 24 | 299 | 1.03e-24 | 102 |
| MS.gene50108.t1 | MTR_7g109135 | 33.679 | 193 | 113 | 7 | 138 | 323 | 17 | 201 | 3.81e-16 | 78.2 |
| MS.gene50108.t1 | MTR_7g109135 | 31.395 | 172 | 107 | 6 | 61 | 229 | 143 | 306 | 5.96e-14 | 71.6 |
| MS.gene50108.t1 | MTR_1g087840 | 29.310 | 290 | 182 | 8 | 46 | 325 | 31 | 307 | 1.28e-24 | 102 |
| MS.gene50108.t1 | MTR_1g087840 | 30.481 | 187 | 115 | 5 | 48 | 229 | 134 | 310 | 1.47e-16 | 79.3 |
| MS.gene50108.t1 | MTR_8g107270 | 24.561 | 285 | 199 | 6 | 33 | 309 | 17 | 293 | 1.54e-24 | 101 |
| MS.gene50108.t1 | MTR_8g107270 | 24.870 | 193 | 133 | 3 | 141 | 321 | 18 | 210 | 5.94e-11 | 62.8 |
| MS.gene50108.t1 | MTR_8g036880 | 25.733 | 307 | 210 | 7 | 24 | 321 | 92 | 389 | 6.64e-24 | 101 |
| MS.gene50108.t1 | MTR_4g078545 | 26.774 | 310 | 207 | 8 | 23 | 321 | 61 | 361 | 1.37e-23 | 100 |
| MS.gene50108.t1 | MTR_2g098070 | 27.097 | 310 | 206 | 8 | 23 | 321 | 52 | 352 | 1.50e-23 | 99.8 |
| MS.gene50108.t1 | MTR_8g098240 | 27.425 | 299 | 197 | 7 | 24 | 322 | 310 | 588 | 2.24e-23 | 100 |
| MS.gene50108.t1 | MTR_7g084400 | 33.333 | 222 | 124 | 8 | 34 | 247 | 207 | 412 | 2.31e-22 | 97.1 |
| MS.gene50108.t1 | MTR_7g084400 | 34.239 | 184 | 109 | 5 | 140 | 318 | 206 | 382 | 9.41e-22 | 95.5 |
| MS.gene50108.t1 | MTR_6g091910 | 31.100 | 209 | 121 | 6 | 33 | 229 | 18 | 215 | 4.20e-22 | 92.8 |
| MS.gene50108.t1 | MTR_6g091910 | 29.534 | 193 | 123 | 3 | 140 | 321 | 18 | 208 | 2.29e-19 | 85.5 |
| MS.gene50108.t1 | MTR_4g057850 | 26.207 | 290 | 182 | 10 | 35 | 311 | 23 | 293 | 2.67e-21 | 92.8 |
| MS.gene50108.t1 | MTR_4g057850 | 32.000 | 200 | 122 | 6 | 27 | 218 | 106 | 299 | 3.85e-13 | 69.3 |
| MS.gene50108.t1 | MTR_7g109135 | 31.405 | 242 | 141 | 9 | 91 | 321 | 1 | 228 | 4.05e-21 | 90.9 |
| MS.gene50108.t1 | MTR_7g109135 | 31.351 | 185 | 116 | 6 | 48 | 229 | 59 | 235 | 2.19e-15 | 74.7 |
| MS.gene50108.t1 | MTR_7g109135 | 34.351 | 131 | 83 | 3 | 193 | 322 | 1 | 129 | 6.34e-11 | 62.0 |
| MS.gene50108.t1 | MTR_5g073040 | 26.351 | 296 | 194 | 9 | 34 | 323 | 39 | 316 | 4.41e-21 | 92.4 |
| MS.gene50108.t1 | MTR_5g073040 | 30.811 | 185 | 119 | 3 | 142 | 325 | 40 | 216 | 1.64e-19 | 87.8 |
| MS.gene50108.t1 | MTR_5g073040 | 33.537 | 164 | 100 | 3 | 75 | 233 | 167 | 326 | 2.33e-14 | 73.2 |
| MS.gene50108.t1 | MTR_1g090330 | 23.203 | 306 | 205 | 5 | 26 | 318 | 6 | 294 | 8.12e-21 | 91.3 |
| MS.gene50108.t1 | MTR_7g117030 | 28.736 | 261 | 160 | 8 | 81 | 323 | 85 | 337 | 1.27e-20 | 91.3 |
| MS.gene50108.t1 | MTR_7g109135 | 34.091 | 176 | 101 | 7 | 155 | 321 | 38 | 207 | 8.26e-20 | 86.7 |
| MS.gene50108.t1 | MTR_7g109135 | 31.351 | 185 | 116 | 6 | 48 | 229 | 38 | 214 | 1.10e-15 | 75.5 |
| MS.gene50108.t1 | MTR_8g076760 | 30.279 | 251 | 150 | 7 | 86 | 321 | 65 | 305 | 5.55e-19 | 86.3 |
| MS.gene50108.t1 | MTR_8g076760 | 32.571 | 175 | 112 | 3 | 156 | 326 | 29 | 201 | 7.67e-19 | 85.9 |
| MS.gene50108.t1 | MTR_8g076760 | 26.923 | 208 | 133 | 7 | 33 | 228 | 112 | 312 | 8.27e-12 | 65.5 |
| MS.gene50108.t1 | MTR_6g034515 | 26.950 | 282 | 179 | 6 | 47 | 321 | 80 | 341 | 1.22e-18 | 85.9 |
| MS.gene50108.t1 | MTR_3g090820 | 26.056 | 284 | 180 | 5 | 62 | 321 | 110 | 387 | 1.62e-18 | 85.9 |
| MS.gene50108.t1 | MTR_8g066975 | 25.243 | 309 | 203 | 7 | 28 | 321 | 1 | 296 | 4.01e-18 | 83.6 |
| MS.gene50108.t1 | MTR_8g066975 | 32.178 | 202 | 122 | 5 | 132 | 322 | 3 | 200 | 4.47e-18 | 83.6 |
| MS.gene50108.t1 | MTR_5g030530 | 28.713 | 202 | 129 | 5 | 132 | 322 | 3 | 200 | 5.65e-18 | 83.2 |
| MS.gene50108.t1 | MTR_5g030530 | 24.092 | 303 | 203 | 7 | 33 | 321 | 7 | 296 | 9.16e-15 | 73.9 |
| MS.gene50108.t1 | MTR_1g097890 | 24.828 | 290 | 182 | 6 | 35 | 323 | 52 | 306 | 8.78e-18 | 82.8 |
| MS.gene50108.t1 | MTR_1g097890 | 29.592 | 196 | 120 | 4 | 25 | 219 | 123 | 301 | 3.34e-16 | 78.2 |
| MS.gene50108.t1 | MTR_1g097890 | 27.189 | 217 | 115 | 7 | 114 | 319 | 23 | 207 | 4.04e-12 | 66.2 |
| MS.gene50108.t1 | MTR_8g092080 | 27.974 | 311 | 179 | 12 | 19 | 323 | 36 | 307 | 3.98e-17 | 81.3 |
| MS.gene50108.t1 | MTR_8g092080 | 28.713 | 202 | 128 | 4 | 25 | 226 | 124 | 309 | 6.05e-16 | 77.8 |
| MS.gene50108.t1 | MTR_4g012850 | 31.720 | 186 | 117 | 5 | 140 | 321 | 15 | 194 | 7.98e-17 | 80.1 |
| MS.gene50108.t1 | MTR_4g012850 | 28.365 | 208 | 137 | 4 | 21 | 227 | 101 | 297 | 3.00e-16 | 78.2 |
| MS.gene50108.t1 | MTR_4g012850 | 25.430 | 291 | 190 | 9 | 33 | 315 | 15 | 286 | 1.65e-13 | 70.5 |
| MS.gene50108.t1 | MTR_3g025800 | 24.611 | 321 | 198 | 8 | 33 | 323 | 27 | 333 | 1.12e-16 | 80.1 |
| MS.gene50108.t1 | MTR_3g025800 | 24.091 | 220 | 144 | 3 | 122 | 318 | 6 | 225 | 5.32e-12 | 66.2 |
| MS.gene50108.t1 | MTR_2g102010 | 30.968 | 155 | 101 | 2 | 49 | 202 | 125 | 274 | 2.06e-16 | 78.6 |
| MS.gene50108.t1 | MTR_2g102010 | 25.182 | 274 | 175 | 7 | 33 | 296 | 16 | 269 | 4.33e-11 | 63.2 |
| MS.gene50108.t1 | MTR_3g100570 | 24.390 | 328 | 195 | 13 | 31 | 323 | 3 | 312 | 4.16e-16 | 78.2 |
| MS.gene50108.t1 | MTR_3g100570 | 22.222 | 216 | 153 | 3 | 14 | 221 | 101 | 309 | 1.70e-11 | 64.7 |
| MS.gene50108.t1 | MTR_6g015860 | 23.552 | 259 | 171 | 5 | 82 | 323 | 60 | 308 | 8.30e-16 | 77.4 |
| MS.gene50108.t1 | MTR_6g015860 | 30.168 | 179 | 109 | 9 | 124 | 294 | 4 | 174 | 9.03e-13 | 68.6 |
| MS.gene50108.t1 | MTR_7g015870 | 28.272 | 191 | 115 | 7 | 145 | 318 | 126 | 311 | 7.92e-15 | 74.3 |
| MS.gene50108.t1 | MTR_7g015870 | 27.805 | 205 | 133 | 6 | 119 | 314 | 4 | 202 | 2.63e-12 | 67.0 |
| MS.gene50108.t1 | MTR_4g094578 | 27.717 | 184 | 117 | 4 | 139 | 315 | 27 | 201 | 1.44e-14 | 73.6 |
| MS.gene50108.t1 | MTR_4g018750 | 24.306 | 288 | 195 | 7 | 40 | 318 | 21 | 294 | 1.99e-14 | 73.2 |
| MS.gene50108.t1 | MTR_7g015870 | 27.461 | 193 | 118 | 7 | 145 | 320 | 122 | 309 | 2.41e-14 | 73.2 |
| MS.gene50108.t1 | MTR_7g015870 | 27.586 | 203 | 131 | 7 | 121 | 314 | 3 | 198 | 1.54e-12 | 67.8 |
| MS.gene50108.t1 | MTR_1g088995 | 22.105 | 285 | 205 | 5 | 38 | 320 | 37 | 306 | 1.31e-13 | 70.9 |
| MS.gene50108.t1 | MTR_7g066690 | 22.635 | 296 | 206 | 7 | 40 | 326 | 23 | 304 | 1.84e-12 | 67.4 |
| MS.gene50108.t1 | MTR_6g033280 | 27.751 | 209 | 132 | 8 | 118 | 317 | 37 | 235 | 2.99e-12 | 67.0 |
| MS.gene50108.t1 | MTR_2g032610 | 23.985 | 271 | 187 | 7 | 59 | 317 | 52 | 315 | 7.62e-12 | 65.5 |
| MS.gene50108.t1 | MTR_5g081910 | 27.778 | 144 | 101 | 3 | 176 | 317 | 99 | 241 | 4.08e-11 | 62.8 |
| MS.gene50108.t1 | MTR_8g068890 | 21.148 | 331 | 204 | 11 | 31 | 323 | 3 | 314 | 4.13e-11 | 63.5 |
| MS.gene50108.t1 | MTR_5g081910 | 21.190 | 269 | 184 | 6 | 76 | 317 | 48 | 315 | 4.72e-11 | 63.5 |
| MS.gene50108.t1 | MTR_7g083790 | 27.586 | 174 | 113 | 5 | 148 | 317 | 90 | 254 | 4.97e-11 | 63.5 |
| MS.gene50108.t1 | MTR_3g462140 | 24.104 | 307 | 209 | 7 | 25 | 321 | 6 | 298 | 5.28e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50108.t1 | AT3G55640 | 70.606 | 330 | 91 | 2 | 1 | 326 | 3 | 330 | 2.76e-170 | 476 |
| MS.gene50108.t1 | AT3G55640 | 70.606 | 330 | 91 | 2 | 1 | 326 | 3 | 330 | 2.76e-170 | 476 |
| MS.gene50108.t1 | AT3G53940 | 63.260 | 362 | 92 | 2 | 4 | 324 | 2 | 363 | 1.24e-164 | 463 |
| MS.gene50108.t1 | AT2G37890 | 63.881 | 335 | 110 | 1 | 1 | 324 | 1 | 335 | 1.82e-156 | 441 |
| MS.gene50108.t1 | AT3G55640 | 68.651 | 252 | 73 | 2 | 1 | 248 | 3 | 252 | 6.36e-122 | 351 |
| MS.gene50108.t1 | AT3G55640 | 32.353 | 204 | 120 | 6 | 127 | 318 | 26 | 223 | 1.27e-19 | 87.0 |
| MS.gene50108.t1 | AT3G55640 | 68.651 | 252 | 73 | 2 | 1 | 248 | 3 | 252 | 6.36e-122 | 351 |
| MS.gene50108.t1 | AT3G55640 | 32.353 | 204 | 120 | 6 | 127 | 318 | 26 | 223 | 1.27e-19 | 87.0 |
| MS.gene50108.t1 | AT3G53940 | 58.392 | 286 | 78 | 2 | 4 | 248 | 2 | 287 | 3.20e-113 | 330 |
| MS.gene50108.t1 | AT3G53940 | 29.358 | 218 | 133 | 4 | 113 | 318 | 50 | 258 | 1.44e-19 | 87.4 |
| MS.gene50108.t1 | AT4G01100 | 37.459 | 307 | 169 | 6 | 34 | 321 | 42 | 344 | 1.05e-60 | 198 |
| MS.gene50108.t1 | AT4G01100 | 34.031 | 191 | 116 | 4 | 136 | 318 | 37 | 225 | 4.47e-23 | 98.2 |
| MS.gene50108.t1 | AT4G01100 | 36.137 | 321 | 168 | 7 | 34 | 321 | 42 | 358 | 6.10e-58 | 191 |
| MS.gene50108.t1 | AT4G01100 | 32.683 | 205 | 114 | 5 | 136 | 318 | 37 | 239 | 3.08e-21 | 93.6 |
| MS.gene50108.t1 | AT4G01100 | 36.242 | 298 | 167 | 6 | 43 | 321 | 1 | 294 | 1.91e-56 | 185 |
| MS.gene50108.t1 | AT5G51050 | 35.974 | 303 | 165 | 9 | 26 | 321 | 215 | 495 | 6.16e-47 | 166 |
| MS.gene50108.t1 | AT4G26180 | 32.258 | 310 | 171 | 7 | 32 | 321 | 19 | 309 | 8.42e-45 | 156 |
| MS.gene50108.t1 | AT4G32400 | 35.473 | 296 | 171 | 7 | 30 | 323 | 110 | 387 | 1.37e-43 | 154 |
| MS.gene50108.t1 | AT4G32400 | 31.163 | 215 | 128 | 6 | 20 | 228 | 191 | 391 | 2.60e-21 | 94.0 |
| MS.gene50108.t1 | AT5G61810 | 32.423 | 293 | 170 | 7 | 34 | 322 | 65 | 333 | 9.20e-42 | 148 |
| MS.gene50108.t1 | AT5G61810 | 29.897 | 194 | 124 | 4 | 27 | 220 | 149 | 330 | 3.61e-19 | 87.0 |
| MS.gene50108.t1 | AT5G61810 | 32.423 | 293 | 170 | 7 | 34 | 322 | 208 | 476 | 1.29e-40 | 148 |
| MS.gene50108.t1 | AT5G61810 | 29.897 | 194 | 124 | 4 | 27 | 220 | 292 | 473 | 9.37e-19 | 87.0 |
| MS.gene50108.t1 | AT1G14560 | 32.203 | 295 | 164 | 8 | 45 | 318 | 38 | 317 | 1.69e-40 | 144 |
| MS.gene50108.t1 | AT1G14560 | 29.646 | 226 | 131 | 7 | 16 | 223 | 105 | 320 | 6.53e-21 | 92.0 |
| MS.gene50108.t1 | AT1G14560 | 30.435 | 184 | 114 | 4 | 153 | 323 | 39 | 221 | 1.04e-16 | 80.1 |
| MS.gene50108.t1 | AT5G48970 | 31.975 | 319 | 184 | 9 | 36 | 325 | 24 | 338 | 3.67e-40 | 144 |
| MS.gene50108.t1 | AT3G21390 | 31.596 | 307 | 180 | 7 | 36 | 315 | 21 | 324 | 5.22e-40 | 143 |
| MS.gene50108.t1 | AT3G21390 | 29.843 | 191 | 114 | 5 | 144 | 318 | 22 | 208 | 4.02e-19 | 87.0 |
| MS.gene50108.t1 | AT3G21390 | 31.596 | 307 | 180 | 7 | 36 | 315 | 43 | 346 | 6.46e-40 | 144 |
| MS.gene50108.t1 | AT3G21390 | 29.688 | 192 | 115 | 5 | 143 | 318 | 43 | 230 | 4.97e-19 | 87.0 |
| MS.gene50108.t1 | AT5G01500 | 32.258 | 279 | 169 | 5 | 45 | 322 | 130 | 389 | 9.26e-40 | 144 |
| MS.gene50108.t1 | AT3G51870 | 32.746 | 284 | 161 | 8 | 45 | 322 | 102 | 361 | 1.16e-39 | 144 |
| MS.gene50108.t1 | AT3G51870 | 29.609 | 179 | 108 | 6 | 153 | 323 | 103 | 271 | 1.67e-12 | 68.2 |
| MS.gene50108.t1 | AT4G26180 | 31.507 | 292 | 161 | 7 | 32 | 303 | 19 | 291 | 4.83e-39 | 140 |
| MS.gene50108.t1 | AT4G26180 | 30.729 | 192 | 117 | 5 | 140 | 318 | 20 | 208 | 1.19e-19 | 87.8 |
| MS.gene50108.t1 | AT5G64970 | 30.573 | 314 | 178 | 7 | 28 | 321 | 129 | 422 | 1.42e-35 | 134 |
| MS.gene50108.t1 | AT5G48970 | 33.333 | 264 | 152 | 7 | 82 | 325 | 8 | 267 | 3.09e-35 | 129 |
| MS.gene50108.t1 | AT5G48970 | 32.886 | 149 | 92 | 4 | 179 | 323 | 3 | 147 | 2.76e-17 | 80.9 |
| MS.gene50108.t1 | AT5G07320 | 32.404 | 287 | 160 | 10 | 43 | 322 | 218 | 477 | 3.35e-35 | 133 |
| MS.gene50108.t1 | AT5G07320 | 32.821 | 195 | 117 | 5 | 27 | 220 | 293 | 474 | 4.31e-19 | 88.2 |
| MS.gene50108.t1 | AT1G14560 | 31.429 | 280 | 156 | 8 | 45 | 303 | 38 | 302 | 1.08e-34 | 129 |
| MS.gene50108.t1 | AT1G14560 | 30.435 | 184 | 114 | 4 | 153 | 323 | 39 | 221 | 7.78e-17 | 80.1 |
| MS.gene50108.t1 | AT5G64970 | 30.293 | 307 | 174 | 7 | 35 | 321 | 12 | 298 | 1.20e-34 | 128 |
| MS.gene50108.t1 | AT5G56450 | 29.245 | 318 | 201 | 9 | 20 | 321 | 16 | 325 | 7.65e-33 | 124 |
| MS.gene50108.t1 | AT5G56450 | 26.282 | 156 | 110 | 2 | 174 | 325 | 79 | 233 | 2.08e-13 | 70.5 |
| MS.gene50108.t1 | AT1G78180 | 30.422 | 332 | 184 | 7 | 10 | 321 | 111 | 415 | 3.29e-31 | 122 |
| MS.gene50108.t1 | AT1G14560 | 34.649 | 228 | 118 | 7 | 112 | 318 | 2 | 219 | 1.87e-30 | 115 |
| MS.gene50108.t1 | AT1G14560 | 29.646 | 226 | 131 | 7 | 16 | 223 | 7 | 222 | 1.28e-21 | 92.0 |
| MS.gene50108.t1 | AT5G64970 | 30.068 | 296 | 167 | 7 | 28 | 303 | 129 | 404 | 7.87e-30 | 117 |
| MS.gene50108.t1 | AT4G11440 | 29.010 | 293 | 184 | 6 | 35 | 322 | 331 | 604 | 1.32e-26 | 110 |
| MS.gene50108.t1 | AT4G11440 | 29.010 | 293 | 184 | 6 | 35 | 322 | 331 | 604 | 1.32e-26 | 110 |
| MS.gene50108.t1 | AT3G08580 | 26.846 | 298 | 200 | 7 | 33 | 321 | 83 | 371 | 1.30e-25 | 105 |
| MS.gene50108.t1 | AT3G08580 | 26.846 | 298 | 200 | 7 | 33 | 321 | 83 | 371 | 1.30e-25 | 105 |
| MS.gene50108.t1 | AT3G20240 | 24.756 | 307 | 205 | 7 | 33 | 326 | 51 | 344 | 3.84e-25 | 103 |
| MS.gene50108.t1 | AT1G07030 | 27.703 | 296 | 195 | 6 | 34 | 325 | 40 | 320 | 4.52e-25 | 103 |
| MS.gene50108.t1 | AT1G07030 | 34.756 | 164 | 94 | 4 | 75 | 231 | 168 | 325 | 2.20e-16 | 79.0 |
| MS.gene50108.t1 | AT4G27940 | 29.231 | 260 | 160 | 5 | 80 | 321 | 154 | 407 | 1.02e-24 | 103 |
| MS.gene50108.t1 | AT2G30160 | 27.425 | 299 | 195 | 7 | 34 | 325 | 42 | 325 | 1.20e-24 | 102 |
| MS.gene50108.t1 | AT1G25380 | 30.742 | 283 | 172 | 8 | 46 | 317 | 33 | 302 | 3.47e-24 | 101 |
| MS.gene50108.t1 | AT1G25380 | 28.497 | 193 | 121 | 6 | 47 | 229 | 134 | 319 | 2.03e-17 | 82.4 |
| MS.gene50108.t1 | AT1G25380 | 30.742 | 283 | 172 | 8 | 46 | 317 | 33 | 302 | 3.47e-24 | 101 |
| MS.gene50108.t1 | AT1G25380 | 28.497 | 193 | 121 | 6 | 47 | 229 | 134 | 319 | 2.03e-17 | 82.4 |
| MS.gene50108.t1 | AT4G28390 | 25.879 | 313 | 213 | 8 | 19 | 321 | 66 | 369 | 3.52e-24 | 102 |
| MS.gene50108.t1 | AT4G28390 | 25.879 | 313 | 213 | 8 | 19 | 321 | 66 | 369 | 3.52e-24 | 102 |
| MS.gene50108.t1 | AT5G13490 | 25.839 | 298 | 203 | 7 | 33 | 321 | 87 | 375 | 8.90e-24 | 100 |
| MS.gene50108.t1 | AT5G13490 | 25.839 | 298 | 203 | 7 | 33 | 321 | 87 | 375 | 8.90e-24 | 100 |
| MS.gene50108.t1 | AT5G01340 | 25.083 | 303 | 195 | 8 | 20 | 311 | 8 | 289 | 2.50e-21 | 92.8 |
| MS.gene50108.t1 | AT1G34065 | 29.545 | 308 | 178 | 13 | 19 | 323 | 59 | 330 | 6.64e-21 | 92.0 |
| MS.gene50108.t1 | AT1G34065 | 29.469 | 207 | 127 | 5 | 25 | 230 | 147 | 335 | 1.21e-17 | 82.8 |
| MS.gene50108.t1 | AT1G34065 | 26.697 | 221 | 112 | 6 | 120 | 319 | 40 | 231 | 4.98e-13 | 69.3 |
| MS.gene50108.t1 | AT1G34065 | 29.545 | 308 | 178 | 13 | 19 | 323 | 66 | 337 | 7.00e-21 | 92.0 |
| MS.gene50108.t1 | AT1G34065 | 29.469 | 207 | 127 | 5 | 25 | 230 | 154 | 342 | 1.70e-17 | 82.4 |
| MS.gene50108.t1 | AT1G34065 | 26.697 | 221 | 112 | 6 | 120 | 319 | 47 | 238 | 5.91e-13 | 69.3 |
| MS.gene50108.t1 | AT2G47490 | 27.869 | 305 | 202 | 8 | 24 | 321 | 7 | 300 | 1.62e-20 | 90.5 |
| MS.gene50108.t1 | AT2G47490 | 35.057 | 174 | 102 | 5 | 157 | 323 | 33 | 202 | 2.23e-15 | 75.9 |
| MS.gene50108.t1 | AT2G47490 | 28.947 | 190 | 123 | 7 | 48 | 233 | 131 | 312 | 7.49e-15 | 74.3 |
| MS.gene50108.t1 | AT5G66380 | 28.990 | 307 | 189 | 10 | 36 | 326 | 12 | 305 | 4.43e-20 | 89.4 |
| MS.gene50108.t1 | AT5G17400 | 24.476 | 286 | 200 | 6 | 32 | 309 | 12 | 289 | 5.34e-19 | 86.3 |
| MS.gene50108.t1 | AT1G14140 | 24.262 | 305 | 200 | 7 | 30 | 320 | 12 | 299 | 3.75e-18 | 84.0 |
| MS.gene50108.t1 | AT5G46800 | 25.325 | 308 | 196 | 7 | 33 | 321 | 7 | 299 | 1.31e-17 | 82.4 |
| MS.gene50108.t1 | AT5G46800 | 29.208 | 202 | 129 | 3 | 135 | 322 | 2 | 203 | 1.65e-17 | 82.0 |
| MS.gene50108.t1 | AT5G46800 | 25.325 | 308 | 196 | 7 | 33 | 321 | 7 | 299 | 1.31e-17 | 82.4 |
| MS.gene50108.t1 | AT5G46800 | 29.208 | 202 | 129 | 3 | 135 | 322 | 2 | 203 | 1.65e-17 | 82.0 |
| MS.gene50108.t1 | AT5G46800 | 25.325 | 308 | 196 | 7 | 33 | 321 | 7 | 299 | 1.31e-17 | 82.4 |
| MS.gene50108.t1 | AT5G46800 | 29.208 | 202 | 129 | 3 | 135 | 322 | 2 | 203 | 1.65e-17 | 82.0 |
| MS.gene50108.t1 | AT1G79900 | 30.256 | 195 | 119 | 5 | 37 | 229 | 112 | 291 | 8.99e-17 | 79.7 |
| MS.gene50108.t1 | AT2G33820 | 26.282 | 312 | 198 | 11 | 26 | 320 | 10 | 306 | 2.93e-16 | 78.6 |
| MS.gene50108.t1 | AT5G58970 | 26.115 | 314 | 195 | 9 | 24 | 321 | 6 | 298 | 6.49e-16 | 77.4 |
| MS.gene50108.t1 | AT4G39460 | 29.808 | 208 | 122 | 5 | 25 | 228 | 130 | 317 | 6.58e-16 | 77.8 |
| MS.gene50108.t1 | AT4G39460 | 27.797 | 295 | 169 | 12 | 34 | 323 | 58 | 313 | 1.05e-15 | 77.0 |
| MS.gene50108.t1 | AT4G39460 | 29.808 | 208 | 122 | 5 | 25 | 228 | 130 | 317 | 6.58e-16 | 77.8 |
| MS.gene50108.t1 | AT4G39460 | 27.797 | 295 | 169 | 12 | 34 | 323 | 58 | 313 | 1.05e-15 | 77.0 |
| MS.gene50108.t1 | AT4G39460 | 29.808 | 208 | 122 | 5 | 25 | 228 | 130 | 317 | 6.58e-16 | 77.8 |
| MS.gene50108.t1 | AT4G39460 | 27.797 | 295 | 169 | 12 | 34 | 323 | 58 | 313 | 1.05e-15 | 77.0 |
| MS.gene50108.t1 | AT2G46320 | 26.848 | 257 | 156 | 7 | 81 | 318 | 109 | 352 | 2.04e-15 | 76.6 |
| MS.gene50108.t1 | AT1G74240 | 24.545 | 330 | 208 | 6 | 16 | 318 | 18 | 333 | 5.64e-15 | 75.5 |
| MS.gene50108.t1 | AT5G42130 | 24.549 | 277 | 187 | 5 | 50 | 321 | 134 | 393 | 1.24e-14 | 74.7 |
| MS.gene50108.t1 | AT3G54110 | 23.208 | 293 | 204 | 6 | 40 | 324 | 21 | 300 | 1.75e-14 | 73.2 |
| MS.gene50108.t1 | AT3G54110 | 24.868 | 189 | 133 | 2 | 33 | 221 | 117 | 296 | 3.69e-11 | 63.5 |
| MS.gene50108.t1 | AT2G46320 | 26.482 | 253 | 154 | 7 | 85 | 318 | 14 | 253 | 3.07e-14 | 72.0 |
| MS.gene50108.t1 | AT2G46320 | 26.482 | 253 | 154 | 7 | 85 | 318 | 14 | 253 | 3.07e-14 | 72.0 |
| MS.gene50108.t1 | AT2G46320 | 26.482 | 253 | 154 | 7 | 85 | 318 | 14 | 253 | 3.07e-14 | 72.0 |
| MS.gene50108.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 62 | 237 | 4.35e-14 | 71.2 |
| MS.gene50108.t1 | AT4G03115 | 23.243 | 185 | 137 | 2 | 134 | 318 | 56 | 235 | 4.73e-12 | 65.5 |
| MS.gene50108.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 70 | 245 | 4.49e-14 | 71.2 |
| MS.gene50108.t1 | AT4G03115 | 21.429 | 238 | 174 | 3 | 81 | 318 | 19 | 243 | 4.09e-12 | 65.9 |
| MS.gene50108.t1 | AT4G03115 | 21.725 | 313 | 224 | 6 | 9 | 318 | 12 | 306 | 6.11e-14 | 72.0 |
| MS.gene50108.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 133 | 308 | 6.34e-14 | 71.6 |
| MS.gene50108.t1 | AT2G33820 | 25.625 | 320 | 198 | 12 | 26 | 320 | 10 | 314 | 8.36e-14 | 71.6 |
| MS.gene50108.t1 | AT4G03115 | 21.382 | 304 | 221 | 5 | 15 | 318 | 53 | 338 | 1.05e-13 | 71.2 |
| MS.gene50108.t1 | AT4G03115 | 26.425 | 193 | 121 | 4 | 33 | 221 | 165 | 340 | 1.13e-13 | 71.2 |
| MS.gene50108.t1 | AT2G22500 | 22.884 | 319 | 197 | 9 | 37 | 323 | 9 | 310 | 2.62e-13 | 70.1 |
| MS.gene50108.t1 | AT3G48850 | 27.128 | 188 | 124 | 5 | 142 | 324 | 72 | 251 | 3.09e-13 | 70.1 |
| MS.gene50108.t1 | AT5G15640 | 28.500 | 200 | 119 | 6 | 142 | 322 | 126 | 320 | 9.73e-13 | 68.6 |
| MS.gene50108.t1 | AT5G15640 | 28.500 | 200 | 119 | 6 | 142 | 322 | 119 | 313 | 9.80e-13 | 68.2 |
| MS.gene50108.t1 | AT5G09470 | 25.926 | 189 | 133 | 2 | 31 | 219 | 148 | 329 | 1.11e-12 | 68.2 |
| MS.gene50108.t1 | AT4G24570 | 21.429 | 322 | 212 | 7 | 31 | 323 | 3 | 312 | 1.22e-12 | 68.2 |
| MS.gene50108.t1 | AT2G17270 | 24.713 | 174 | 123 | 2 | 142 | 315 | 23 | 188 | 1.90e-12 | 67.4 |
| MS.gene50108.t1 | AT5G14040 | 28.736 | 174 | 111 | 5 | 148 | 317 | 90 | 254 | 2.74e-11 | 64.3 |
| MS.gene50108.t1 | AT2G33820 | 25.424 | 177 | 131 | 1 | 41 | 216 | 43 | 219 | 2.93e-11 | 62.8 |
| MS.gene50108.t1 | AT1G74240 | 24.101 | 278 | 172 | 5 | 68 | 318 | 20 | 285 | 5.38e-11 | 63.2 |
Find 80 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCTTGTGGCAGTCTTTC+AGG | 0.123605 | 5.4:+63756060 | MS.gene50108:CDS |
| TAATCCATGAAGAGGGGTTT+AGG | 0.243240 | 5.4:+63755105 | MS.gene50108:CDS |
| GAGAAGCTGATTGCTATATT+TGG | 0.270991 | 5.4:-63755861 | None:intergenic |
| GGGATTACTCGGCCTTTATA+AGG | 0.273893 | 5.4:+63755726 | MS.gene50108:CDS |
| CTTTGAGGAAAGCGAGTATA+TGG | 0.320572 | 5.4:+63755066 | MS.gene50108:CDS |
| ATGAAAGCTTGCGATCGTTT+TGG | 0.327150 | 5.4:+63755889 | MS.gene50108:CDS |
| AATCCATGAAGAGGGGTTTA+GGG | 0.337988 | 5.4:+63755106 | MS.gene50108:CDS |
| TTTACTTACTATAGAGGTAT+TGG | 0.338091 | 5.4:+63755673 | MS.gene50108:CDS |
| TTCAACTGTTGTTGTTAGTC+TGG | 0.353204 | 5.4:+63756041 | MS.gene50108:CDS |
| ATTCTAATGTTGCAACTTTG+AGG | 0.359407 | 5.4:+63755051 | MS.gene50108:CDS |
| AAGCCCTAAACCCCTCTTCA+TGG | 0.361238 | 5.4:-63755109 | None:intergenic |
| GGCACAACCTTATAGTATTC+AGG | 0.364759 | 5.4:-63757698 | None:intergenic |
| TTTGTTGGTGGTGGGTTGGC+AGG | 0.370802 | 5.4:+63755368 | MS.gene50108:CDS |
| CGATCGCAAGCTTTCATATA+CGG | 0.396542 | 5.4:-63755883 | None:intergenic |
| CTCGGCCTTTATAAGGGACT+TGG | 0.408288 | 5.4:+63755733 | MS.gene50108:CDS |
| TCAGGCATTGCATCATCAAC+AGG | 0.416081 | 5.4:+63756078 | MS.gene50108:CDS |
| AAGAACGCGGCTTGCTGCAC+AGG | 0.423096 | 5.4:+63755430 | MS.gene50108:CDS |
| CTTCTCGCCGGAGGAGTTGC+CGG | 0.423493 | 5.4:+63754026 | MS.gene50108:CDS |
| ACAAACAATTGTCAAGGAAG+AGG | 0.426240 | 5.4:+63755705 | MS.gene50108:CDS |
| GGATTACTCGGCCTTTATAA+GGG | 0.437307 | 5.4:+63755727 | MS.gene50108:CDS |
| TAGTTCCAAGTCCCTTATAA+AGG | 0.439391 | 5.4:-63755738 | None:intergenic |
| TAACGGTGGACGGTGGTGTT+CGG | 0.453198 | 5.4:+63753952 | MS.gene50108:CDS |
| CAACCACCGCCGCAACAGAT+TGG | 0.456851 | 5.4:+63753990 | MS.gene50108:CDS |
| GTTCCAATCTGTTGCGGCGG+TGG | 0.457668 | 5.4:-63753993 | None:intergenic |
| TAAAAGTTAACAGAAGAGTA+AGG | 0.459944 | 5.4:-63755170 | None:intergenic |
| TGCTACATCTACTTATCCCT+TGG | 0.467252 | 5.4:+63755400 | MS.gene50108:CDS |
| GTACATTCAAGCATATATTC+CGG | 0.468396 | 5.4:+63757639 | MS.gene50108:CDS |
| TTCAAGAATAATCCATGAAG+AGG | 0.469893 | 5.4:+63755097 | MS.gene50108:CDS |
| TGGAGATGCAAACGGAAGCT+AGG | 0.470661 | 5.4:+63753922 | None:intergenic |
| TGGTGCTAATGCAGACTGTT+GGG | 0.472674 | 5.4:+63755838 | MS.gene50108:intron |
| ATATGCAGCAACGTTTCCAT+TGG | 0.474353 | 5.4:+63757544 | MS.gene50108:intron |
| CAGGTAAAATTCCTCTGTAA+AGG | 0.481174 | 5.4:-63757679 | None:intergenic |
| GTGTACAATACAGGTCTCTT+TGG | 0.487805 | 5.4:+63757617 | MS.gene50108:CDS |
| CTGGTGCTAATGCAGACTGT+TGG | 0.488868 | 5.4:+63755837 | MS.gene50108:intron |
| TTGGAATTTGGAGATGCAAA+CGG | 0.491470 | 5.4:+63753914 | None:intergenic |
| CAAAGCTCCGGCAACTCCTC+CGG | 0.494245 | 5.4:-63754033 | None:intergenic |
| CAAACAATTGTCAAGGAAGA+GGG | 0.494902 | 5.4:+63755706 | MS.gene50108:CDS |
| CGAGCGCGTGTGTACAATAC+AGG | 0.494967 | 5.4:+63757608 | MS.gene50108:CDS |
| AACCATCTTCAGTGTCTCAT+AGG | 0.501803 | 5.4:-63757744 | None:intergenic |
| GACCTATGAGACACTGAAGA+TGG | 0.501950 | 5.4:+63757742 | MS.gene50108:CDS |
| TCTCTATTACTTTGCAGTTG+CGG | 0.504953 | 5.4:-63755317 | None:intergenic |
| TTCTTATGAGCATTACAAGA+AGG | 0.522188 | 5.4:+63755193 | MS.gene50108:CDS |
| TATAAGGTTGTGCCTGGTGT+AGG | 0.529307 | 5.4:+63757707 | MS.gene50108:CDS |
| TAACAGAAGAGTAAGGTAAA+CGG | 0.531609 | 5.4:-63755163 | None:intergenic |
| GGAAGCTAGGGTTGGTGTAA+CGG | 0.532148 | 5.4:+63753935 | MS.gene50108:CDS |
| CTCCGTCTAACAAGATCCAA+TGG | 0.539106 | 5.4:-63757560 | None:intergenic |
| TCAAGAATAATCCATGAAGA+GGG | 0.543154 | 5.4:+63755098 | MS.gene50108:CDS |
| AGGGTTGGTGTAACGGTGGA+CGG | 0.554866 | 5.4:+63753942 | MS.gene50108:CDS |
| GGAGATGCAAACGGAAGCTA+GGG | 0.555939 | 5.4:+63753923 | None:intergenic |
| AACAACAACAGTTGAATCAT+CGG | 0.558241 | 5.4:-63756034 | None:intergenic |
| GTCAAGGAAGAGGGATTACT+CGG | 0.560113 | 5.4:+63755715 | MS.gene50108:CDS |
| ACTATTTCTCAGCTTCTCGC+CGG | 0.561608 | 5.4:+63754014 | MS.gene50108:CDS |
| AAGCATATATTCCGGTCAGA+AGG | 0.563525 | 5.4:+63757647 | MS.gene50108:CDS |
| TTCCATTGGATCTTGTTAGA+CGG | 0.564464 | 5.4:+63757558 | MS.gene50108:CDS |
| GGGACTTGGAACTACCCTCT+TGG | 0.572235 | 5.4:+63755747 | MS.gene50108:CDS |
| AGTTGATGGGTGTAATCATA+CGG | 0.572720 | 5.4:-63757783 | None:intergenic |
| CCGCGTTCTTACAAGATCCA+AGG | 0.576326 | 5.4:-63755417 | None:intergenic |
| TGCTTTACAAACAATTGTCA+AGG | 0.578320 | 5.4:+63755699 | MS.gene50108:CDS |
| AGACGGAGGAAGCAACTTGA+GGG | 0.579075 | 5.4:+63757575 | MS.gene50108:CDS |
| CGCGTTCTTACAAGATCCAA+GGG | 0.583255 | 5.4:-63755416 | None:intergenic |
| GGCCACGCAAACCTTCTGAC+CGG | 0.592865 | 5.4:-63757658 | None:intergenic |
| TAGACGGAGGAAGCAACTTG+AGG | 0.593462 | 5.4:+63757574 | MS.gene50108:CDS |
| ATTTCTCAGCTTCTCGCCGG+AGG | 0.601058 | 5.4:+63754017 | MS.gene50108:CDS |
| GAATACTATAAGGTTGTGCC+TGG | 0.602847 | 5.4:+63757701 | MS.gene50108:CDS |
| ATGCAAACGGAAGCTAGGGT+TGG | 0.605982 | 5.4:+63753927 | MS.gene50108:CDS |
| CCTTGGATCTTGTAAGAACG+CGG | 0.611552 | 5.4:+63755417 | MS.gene50108:CDS |
| TTCCGGTCAGAAGGTTTGCG+TGG | 0.617988 | 5.4:+63757656 | MS.gene50108:CDS |
| CATTGGATCTTGTTAGACGG+AGG | 0.625988 | 5.4:+63757561 | MS.gene50108:CDS |
| GAAATAGTTCCAATCTGTTG+CGG | 0.634856 | 5.4:-63753999 | None:intergenic |
| GGTTTGCGTGGCCTTTACAG+AGG | 0.639547 | 5.4:+63757668 | MS.gene50108:CDS |
| CAAGAATAATCCATGAAGAG+GGG | 0.640978 | 5.4:+63755099 | MS.gene50108:CDS |
| GTTGTTGTTAGTCTGGCTTG+TGG | 0.646435 | 5.4:+63756048 | MS.gene50108:CDS |
| AGCTAGGGTTGGTGTAACGG+TGG | 0.654947 | 5.4:+63753938 | MS.gene50108:CDS |
| ACGGAGGAAGCAACTTGAGG+GGG | 0.659118 | 5.4:+63757577 | MS.gene50108:CDS |
| GTTGGTGTAACGGTGGACGG+TGG | 0.659448 | 5.4:+63753945 | MS.gene50108:CDS |
| GACGGAGGAAGCAACTTGAG+GGG | 0.659793 | 5.4:+63757576 | MS.gene50108:CDS |
| ATAGTTCCAATCTGTTGCGG+CGG | 0.660860 | 5.4:-63753996 | None:intergenic |
| ATAAAACAAATGCCTACACC+AGG | 0.667613 | 5.4:-63757719 | None:intergenic |
| AGGATTGTGAGTCTAGCAAG+TGG | 0.683649 | 5.4:-63754074 | None:intergenic |
| ATAATAACATCATACCAAGA+GGG | 0.684442 | 5.4:-63755761 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGATATTGATAATATA+TGG | - | chr5.4:63756982-63757001 | None:intergenic | 10.0% |
| !!! | TTTTTATTCATTTTGTTATT+GGG | + | chr5.4:63754151-63754170 | MS.gene50108:intron | 10.0% |
| !!! | TTTTTTATTCATTTTGTTAT+TGG | + | chr5.4:63754150-63754169 | MS.gene50108:intron | 10.0% |
| !! | ATTATCAATATCAATATCAA+TGG | + | chr5.4:63756985-63757004 | MS.gene50108:intron | 15.0% |
| !! | TTATGAAAATAAGGTAAAAA+TGG | + | chr5.4:63754500-63754519 | MS.gene50108:intron | 15.0% |
| !!! | ATAATAATTCTAGAAAACTA+AGG | - | chr5.4:63754987-63755006 | None:intergenic | 15.0% |
| !!! | TTCTTCAATTTTTATTTAAC+TGG | - | chr5.4:63756334-63756353 | None:intergenic | 15.0% |
| !!! | TTTTGAATTGAGATAATTTT+GGG | + | chr5.4:63754270-63754289 | MS.gene50108:intron | 15.0% |
| !! | AAATTATCAGGAATATGTAT+AGG | - | chr5.4:63756195-63756214 | None:intergenic | 20.0% |
| !! | AAATTCAATAGTTTGACTAA+AGG | - | chr5.4:63756358-63756377 | None:intergenic | 20.0% |
| !! | ACATGTCATAAAATAAAACT+TGG | - | chr5.4:63756615-63756634 | None:intergenic | 20.0% |
| !! | ACTGTATGAGTTAATTAATT+TGG | + | chr5.4:63754247-63754266 | MS.gene50108:intron | 20.0% |
| !! | ATAAATGAAATTGTCAACAT+AGG | + | chr5.4:63756920-63756939 | MS.gene50108:intron | 20.0% |
| !! | ATAAGTTGTTTATCCAAATA+GGG | + | chr5.4:63754749-63754768 | MS.gene50108:intron | 20.0% |
| !! | CATGTCATAAAATAAAACTT+GGG | - | chr5.4:63756614-63756633 | None:intergenic | 20.0% |
| !! | TAATAAATTTCCTGAAAAAC+AGG | - | chr5.4:63756559-63756578 | None:intergenic | 20.0% |
| !! | TATGAATATACATGAATTAG+AGG | - | chr5.4:63755973-63755992 | None:intergenic | 20.0% |
| !! | TTCAAATATGATTAGATTTC+TGG | + | chr5.4:63757383-63757402 | MS.gene50108:intron | 20.0% |
| !! | TTTCCAAAATTGAAATTAAG+AGG | - | chr5.4:63755521-63755540 | None:intergenic | 20.0% |
| !!! | AACATAATTTGTTATTGAAG+TGG | - | chr5.4:63757344-63757363 | None:intergenic | 20.0% |
| !!! | AATTTTACCTGAATACTATA+AGG | + | chr5.4:63757691-63757710 | MS.gene50108:CDS | 20.0% |
| !!! | ATAAATTTTTCACCTGAAAA+AGG | - | chr5.4:63754097-63754116 | None:intergenic | 20.0% |
| !!! | GTTTTGAATTGAGATAATTT+TGG | + | chr5.4:63754269-63754288 | MS.gene50108:intron | 20.0% |
| !!! | TATAACATTACTTGATTTGA+TGG | + | chr5.4:63757436-63757455 | MS.gene50108:intron | 20.0% |
| !!! | TATAATTTTTGCAGATTCAA+GGG | + | chr5.4:63755024-63755043 | MS.gene50108:intron | 20.0% |
| !!! | TTAGTAATTTTGTTGTATCT+TGG | + | chr5.4:63754176-63754195 | MS.gene50108:intron | 20.0% |
| !!! | TTATAATTTTTGCAGATTCA+AGG | + | chr5.4:63755023-63755042 | MS.gene50108:intron | 20.0% |
| !!! | TTTGAATTGAGATAATTTTG+GGG | + | chr5.4:63754271-63754290 | MS.gene50108:intron | 20.0% |
| ! | AAAACATACTATTGCTGTAT+TGG | - | chr5.4:63757075-63757094 | None:intergenic | 25.0% |
| ! | AAAGAAGTTAATATCTGTAG+TGG | + | chr5.4:63756396-63756415 | MS.gene50108:intron | 25.0% |
| ! | AATAAGGTAAAAATGGTATG+TGG | + | chr5.4:63754507-63754526 | MS.gene50108:intron | 25.0% |
| ! | ACATCAAAAGGTAAATTATC+AGG | - | chr5.4:63756207-63756226 | None:intergenic | 25.0% |
| ! | ATAAGGTAAAAATGGTATGT+GGG | + | chr5.4:63754508-63754527 | MS.gene50108:intron | 25.0% |
| ! | ATAATAACATCATACCAAGA+GGG | - | chr5.4:63755764-63755783 | None:intergenic | 25.0% |
| ! | GATAAGTTGTTTATCCAAAT+AGG | + | chr5.4:63754748-63754767 | MS.gene50108:intron | 25.0% |
| ! | GCCATTTGAAAATTTAGTAA+GGG | + | chr5.4:63756511-63756530 | MS.gene50108:intron | 25.0% |
| ! | TAAAAGTTAACAGAAGAGTA+AGG | - | chr5.4:63755173-63755192 | None:intergenic | 25.0% |
| ! | TCAATATCAATATCAATGGA+TGG | + | chr5.4:63756989-63757008 | MS.gene50108:intron | 25.0% |
| ! | TGACAATTTCATTTATCCAT+TGG | - | chr5.4:63756916-63756935 | None:intergenic | 25.0% |
| ! | TTACAAGAAGGTAAGAATAT+TGG | + | chr5.4:63755205-63755224 | MS.gene50108:intron | 25.0% |
| ! | TTAGCGAGTTTATGAAAATA+AGG | + | chr5.4:63754491-63754510 | MS.gene50108:intron | 25.0% |
| ! | TTGTCAAAACTGTATTCTAT+TGG | + | chr5.4:63757018-63757037 | MS.gene50108:intron | 25.0% |
| !! | AATCACAATTTTCTTCGTTT+AGG | - | chr5.4:63756861-63756880 | None:intergenic | 25.0% |
| !! | ACGAATTTTACTTACTATAG+AGG | + | chr5.4:63755667-63755686 | MS.gene50108:CDS | 25.0% |
| !! | ATATGGTTTTCTTTCTTTGA+AGG | - | chr5.4:63756965-63756984 | None:intergenic | 25.0% |
| !! | CATCCTCTTAATTTCAATTT+TGG | + | chr5.4:63755515-63755534 | MS.gene50108:intron | 25.0% |
| !! | GATCTTTGTATACATTTTGT+TGG | + | chr5.4:63755353-63755372 | MS.gene50108:CDS | 25.0% |
| !! | TATAATTTTTGTCACTGTGT+TGG | + | chr5.4:63754889-63754908 | MS.gene50108:intron | 25.0% |
| !! | TCCCTTACTAAATTTTCAAA+TGG | - | chr5.4:63756515-63756534 | None:intergenic | 25.0% |
| !! | TGCCATTTGAAAATTTAGTA+AGG | + | chr5.4:63756510-63756529 | MS.gene50108:intron | 25.0% |
| !! | TTTACTTACTATAGAGGTAT+TGG | + | chr5.4:63755673-63755692 | MS.gene50108:CDS | 25.0% |
| !! | TTTTGATGTTTCTTGCAATT+GGG | + | chr5.4:63756218-63756237 | MS.gene50108:intron | 25.0% |
| !!! | TATGATTAGATTTCTGGTTT+TGG | + | chr5.4:63757389-63757408 | MS.gene50108:intron | 25.0% |
| AACAACAACAGTTGAATCAT+CGG | - | chr5.4:63756037-63756056 | None:intergenic | 30.0% | |
| AAGCATATATTCCTTTCTTG+TGG | + | chr5.4:63755801-63755820 | MS.gene50108:intron | 30.0% | |
| ACTGTTATCATTAGCTATCT+TGG | - | chr5.4:63754626-63754645 | None:intergenic | 30.0% | |
| ATAAAATAACAACTCCATCC+CGG | - | chr5.4:63756489-63756508 | None:intergenic | 30.0% | |
| ATATCAATATCAATGGATGG+TGG | + | chr5.4:63756992-63757011 | MS.gene50108:intron | 30.0% | |
| ATGAATTAGAGGAAAATCAG+TGG | - | chr5.4:63755962-63755981 | None:intergenic | 30.0% | |
| ATGGTGCATTTCACATAAAA+AGG | + | chr5.4:63757455-63757474 | MS.gene50108:intron | 30.0% | |
| ATTCTAATGTTGCAACTTTG+AGG | + | chr5.4:63755051-63755070 | MS.gene50108:CDS | 30.0% | |
| ATTTCACATAAAAAGGGATC+AGG | + | chr5.4:63757462-63757481 | MS.gene50108:intron | 30.0% | |
| CAATTGCAAGAAACATCAAA+AGG | - | chr5.4:63756219-63756238 | None:intergenic | 30.0% | |
| GATAATAACATCATACCAAG+AGG | - | chr5.4:63755765-63755784 | None:intergenic | 30.0% | |
| GTACATTCAAGCATATATTC+CGG | + | chr5.4:63757639-63757658 | MS.gene50108:CDS | 30.0% | |
| TAACAGAAGAGTAAGGTAAA+CGG | - | chr5.4:63755166-63755185 | None:intergenic | 30.0% | |
| TCAAGAATAATCCATGAAGA+GGG | + | chr5.4:63755098-63755117 | MS.gene50108:CDS | 30.0% | |
| TCATAACTCATAAGCTGTTT+GGG | + | chr5.4:63754535-63754554 | MS.gene50108:intron | 30.0% | |
| TGCTTTACAAACAATTGTCA+AGG | + | chr5.4:63755699-63755718 | MS.gene50108:CDS | 30.0% | |
| TGGTGCATTTCACATAAAAA+GGG | + | chr5.4:63757456-63757475 | MS.gene50108:intron | 30.0% | |
| TTCAAGAATAATCCATGAAG+AGG | + | chr5.4:63755097-63755116 | MS.gene50108:CDS | 30.0% | |
| TTCTTATGAGCATTACAAGA+AGG | + | chr5.4:63755193-63755212 | MS.gene50108:CDS | 30.0% | |
| TTTGATGTTTCTTGCAATTG+GGG | + | chr5.4:63756219-63756238 | MS.gene50108:intron | 30.0% | |
| ! | CTCTCGAATTTCGATAATTT+TGG | + | chr5.4:63754846-63754865 | MS.gene50108:intron | 30.0% |
| ! | CTTTGTATACATTTTGTTGG+TGG | + | chr5.4:63755356-63755375 | MS.gene50108:CDS | 30.0% |
| ! | CTTTTGATGTTTCTTGCAAT+TGG | + | chr5.4:63756217-63756236 | MS.gene50108:intron | 30.0% |
| ! | GGAATATATGCTTTGAGTAA+TGG | - | chr5.4:63755794-63755813 | None:intergenic | 30.0% |
| ! | TCAACAGGTTAGTTATCAAA+AGG | + | chr5.4:63756093-63756112 | MS.gene50108:intron | 30.0% |
| ! | TCTTGATTGTTGAACTTTTG+AGG | + | chr5.4:63756161-63756180 | MS.gene50108:intron | 30.0% |
| ! | TTGATATGCACTTTTGTTCT+CGG | + | chr5.4:63755241-63755260 | MS.gene50108:intron | 30.0% |
| ! | TTGGGGTTTGTATATTCTTT+TGG | + | chr5.4:63756236-63756255 | MS.gene50108:intron | 30.0% |
| !! | TAGCATCTTTCATGTTTTTG+AGG | + | chr5.4:63757148-63757167 | MS.gene50108:intron | 30.0% |
| !!! | TTTTGGAATTAGTTCTCACT+GGG | + | chr5.4:63757406-63757425 | MS.gene50108:intron | 30.0% |
| AACAATGATTGAGAGAGAGA+TGG | + | chr5.4:63754925-63754944 | MS.gene50108:intron | 35.0% | |
| ACAAACAATTGTCAAGGAAG+AGG | + | chr5.4:63755705-63755724 | MS.gene50108:CDS | 35.0% | |
| AGTCAATCAAAACATGCACT+AGG | + | chr5.4:63754816-63754835 | MS.gene50108:intron | 35.0% | |
| ATAAAACAAATGCCTACACC+AGG | - | chr5.4:63757722-63757741 | None:intergenic | 35.0% | |
| ATGAACCTATATCATTCCCT+CGG | + | chr5.4:63756682-63756701 | MS.gene50108:intron | 35.0% | |
| CAAACAATTGTCAAGGAAGA+GGG | + | chr5.4:63755706-63755725 | MS.gene50108:CDS | 35.0% | |
| CAAGAAATGACCTTATGTGA+CGG | - | chr5.4:63756661-63756680 | None:intergenic | 35.0% | |
| CAAGAATAATCCATGAAGAG+GGG | + | chr5.4:63755099-63755118 | MS.gene50108:CDS | 35.0% | |
| CACTGGACAATTACATTTAC+AGG | - | chr5.4:63757291-63757310 | None:intergenic | 35.0% | |
| CAGGTAAAATTCCTCTGTAA+AGG | - | chr5.4:63757682-63757701 | None:intergenic | 35.0% | |
| GAAATAGTTCCAATCTGTTG+CGG | - | chr5.4:63754002-63754021 | None:intergenic | 35.0% | |
| GAGAAGCTGATTGCTATATT+TGG | - | chr5.4:63755864-63755883 | None:intergenic | 35.0% | |
| GTCATAACTCATAAGCTGTT+TGG | + | chr5.4:63754534-63754553 | MS.gene50108:intron | 35.0% | |
| GTCCATTTGACAACAAATTG+CGG | + | chr5.4:63757215-63757234 | MS.gene50108:intron | 35.0% | |
| GTTGTCAAATGGACAAGATA+TGG | - | chr5.4:63757209-63757228 | None:intergenic | 35.0% | |
| TAAATGTAATTGTCCAGTGC+AGG | + | chr5.4:63757292-63757311 | MS.gene50108:intron | 35.0% | |
| TAACAGATGAATTCAACCGT+AGG | - | chr5.4:63757517-63757536 | None:intergenic | 35.0% | |
| TAGTTCCAAGTCCCTTATAA+AGG | - | chr5.4:63755741-63755760 | None:intergenic | 35.0% | |
| TCTCTATTACTTTGCAGTTG+CGG | - | chr5.4:63755320-63755339 | None:intergenic | 35.0% | |
| TGTAAGACTATGACCCTATT+TGG | - | chr5.4:63754765-63754784 | None:intergenic | 35.0% | |
| TTCCATTGGATCTTGTTAGA+CGG | + | chr5.4:63757558-63757577 | MS.gene50108:CDS | 35.0% | |
| TTCTATTGGCACTAACTACT+TGG | + | chr5.4:63757032-63757051 | MS.gene50108:intron | 35.0% | |
| TTGCTCATGATAAAAGCCAA+TGG | + | chr5.4:63756897-63756916 | MS.gene50108:intron | 35.0% | |
| ! | ACAAGTTTTACTCAAAGCTC+CGG | - | chr5.4:63754048-63754067 | None:intergenic | 35.0% |
| ! | TACTTGTTCACATGTTTCTG+AGG | + | chr5.4:63756795-63756814 | MS.gene50108:intron | 35.0% |
| ! | TAGACTCACAATCCTTTTTC+AGG | + | chr5.4:63754082-63754101 | MS.gene50108:CDS | 35.0% |
| ! | TCAAAACATGCACTAGGTTT+TGG | + | chr5.4:63754822-63754841 | MS.gene50108:intron | 35.0% |
| ! | TTACCTTTTTCCTACATCTC+TGG | + | chr5.4:63756262-63756281 | MS.gene50108:intron | 35.0% |
| ! | TTCAACTGTTGTTGTTAGTC+TGG | + | chr5.4:63756041-63756060 | MS.gene50108:CDS | 35.0% |
| ! | TTTGGAATTAGTTCTCACTG+GGG | + | chr5.4:63757407-63757426 | MS.gene50108:intron | 35.0% |
| ! | TTTTATACGTGCAGTTTCTG+AGG | + | chr5.4:63755288-63755307 | MS.gene50108:intron | 35.0% |
| !! | GATAATTTTGGGGACTGAAT+TGG | + | chr5.4:63754281-63754300 | MS.gene50108:intron | 35.0% |
| !! | GGTTGTTGCTTATGATTTTG+TGG | + | chr5.4:63754302-63754321 | MS.gene50108:intron | 35.0% |
| !! | TCACACTTTTCCTGTTTTTC+AGG | + | chr5.4:63756546-63756565 | MS.gene50108:intron | 35.0% |
| !! | TGTATACATTTTGTTGGTGG+TGG | + | chr5.4:63755359-63755378 | MS.gene50108:CDS | 35.0% |
| !! | TTTTGGAAACTTGCAAGACT+TGG | + | chr5.4:63755532-63755551 | MS.gene50108:intron | 35.0% |
| !!! | GTATACATTTTGTTGGTGGT+GGG | + | chr5.4:63755360-63755379 | MS.gene50108:CDS | 35.0% |
| !!! | GTTTTGGAATTAGTTCTCAC+TGG | + | chr5.4:63757405-63757424 | MS.gene50108:intron | 35.0% |
| AACAGTTGAATCATCGGATC+TGG | - | chr5.4:63756031-63756050 | None:intergenic | 40.0% | |
| AACCATCTTCAGTGTCTCAT+AGG | - | chr5.4:63757747-63757766 | None:intergenic | 40.0% | |
| AAGCATATATTCCGGTCAGA+AGG | + | chr5.4:63757647-63757666 | MS.gene50108:CDS | 40.0% | |
| AATCCATGAAGAGGGGTTTA+GGG | + | chr5.4:63755106-63755125 | MS.gene50108:CDS | 40.0% | |
| AATGATTGAGAGAGAGATGG+TGG | + | chr5.4:63754928-63754947 | MS.gene50108:intron | 40.0% | |
| ACATACAGTTGTAGTAGCAG+TGG | - | chr5.4:63757102-63757121 | None:intergenic | 40.0% | |
| ATATGCAGCAACGTTTCCAT+TGG | + | chr5.4:63757544-63757563 | MS.gene50108:intron | 40.0% | |
| ATGATTGAGAGAGAGATGGT+GGG | + | chr5.4:63754929-63754948 | MS.gene50108:intron | 40.0% | |
| ATGCCAGAGATGTAGGAAAA+AGG | - | chr5.4:63756268-63756287 | None:intergenic | 40.0% | |
| CGATCGCAAGCTTTCATATA+CGG | - | chr5.4:63755886-63755905 | None:intergenic | 40.0% | |
| CGTCACATAAGGTCATTTCT+TGG | + | chr5.4:63756659-63756678 | MS.gene50108:intron | 40.0% | |
| CTTGTAGACTAGAATGCCTA+CGG | + | chr5.4:63757498-63757517 | MS.gene50108:intron | 40.0% | |
| GAATACTATAAGGTTGTGCC+TGG | + | chr5.4:63757701-63757720 | MS.gene50108:CDS | 40.0% | |
| GCTACTACAACTGTATGTTC+AGG | + | chr5.4:63757104-63757123 | MS.gene50108:intron | 40.0% | |
| GGATTACTCGGCCTTTATAA+GGG | + | chr5.4:63755727-63755746 | MS.gene50108:CDS | 40.0% | |
| GGCACAACCTTATAGTATTC+AGG | - | chr5.4:63757701-63757720 | None:intergenic | 40.0% | |
| GTGTACAATACAGGTCTCTT+TGG | + | chr5.4:63757617-63757636 | MS.gene50108:CDS | 40.0% | |
| TAAGAAAGACAGCACTACAC+AGG | - | chr5.4:63757261-63757280 | None:intergenic | 40.0% | |
| TAATCCATGAAGAGGGGTTT+AGG | + | chr5.4:63755105-63755124 | MS.gene50108:CDS | 40.0% | |
| TGCTACATCTACTTATCCCT+TGG | + | chr5.4:63755400-63755419 | MS.gene50108:CDS | 40.0% | |
| TGTGTAGTGCTGTCTTTCTT+AGG | + | chr5.4:63757260-63757279 | MS.gene50108:intron | 40.0% | |
| ! | ATGAAAGCTTGCGATCGTTT+TGG | + | chr5.4:63755889-63755908 | MS.gene50108:CDS | 40.0% |
| ! | CTTTGAGGAAAGCGAGTATA+TGG | + | chr5.4:63755066-63755085 | MS.gene50108:CDS | 40.0% |
| !! | CTCCGCAATTTGTTGTCAAA+TGG | - | chr5.4:63757220-63757239 | None:intergenic | 40.0% |
| !! | GATCGTTTTGGATGTCAAAC+AGG | + | chr5.4:63755901-63755920 | MS.gene50108:CDS | 40.0% |
| !! | GGTTTAGGGCTTTTTGGAAA+GGG | + | chr5.4:63755120-63755139 | MS.gene50108:CDS | 40.0% |
| !!! | GACACTGAAGATGGTTTTAG+CGG | + | chr5.4:63757751-63757770 | MS.gene50108:CDS | 40.0% |
| AAGAGGACACCTCTCACATT+TGG | - | chr5.4:63756711-63756730 | None:intergenic | 45.0% | |
| ACACTTGATGCCAGAGATGT+AGG | - | chr5.4:63756275-63756294 | None:intergenic | 45.0% | |
| ACATCAGGTGAAGGTAACCT+AGG | - | chr5.4:63756750-63756769 | None:intergenic | 45.0% | |
| ACCTTCACCTGATGTTTGGA+CGG | + | chr5.4:63756755-63756774 | MS.gene50108:intron | 45.0% | |
| ACGGAATCAGCTGCATAACT+TGG | - | chr5.4:63756642-63756661 | None:intergenic | 45.0% | |
| AGGATTGTGAGTCTAGCAAG+TGG | - | chr5.4:63754077-63754096 | None:intergenic | 45.0% | |
| AGTGGCTAAGTCCACAAGAA+AGG | - | chr5.4:63755815-63755834 | None:intergenic | 45.0% | |
| ATAGTTCCAATCTGTTGCGG+CGG | - | chr5.4:63753999-63754018 | None:intergenic | 45.0% | |
| CATTGGATCTTGTTAGACGG+AGG | + | chr5.4:63757561-63757580 | MS.gene50108:CDS | 45.0% | |
| CCTTGGATCTTGTAAGAACG+CGG | + | chr5.4:63755417-63755436 | MS.gene50108:CDS | 45.0% | |
| CGCGTTCTTACAAGATCCAA+GGG | - | chr5.4:63755419-63755438 | None:intergenic | 45.0% | |
| CGGAATCAGCTGCATAACTT+GGG | - | chr5.4:63756641-63756660 | None:intergenic | 45.0% | |
| CTACAACTGTATGTTCAGGC+AGG | + | chr5.4:63757108-63757127 | MS.gene50108:intron | 45.0% | |
| CTCCGTCTAACAAGATCCAA+TGG | - | chr5.4:63757563-63757582 | None:intergenic | 45.0% | |
| CTGATATCCGTCCAAACATC+AGG | - | chr5.4:63756765-63756784 | None:intergenic | 45.0% | |
| GACCTATGAGACACTGAAGA+TGG | + | chr5.4:63757742-63757761 | MS.gene50108:CDS | 45.0% | |
| GGAATCAGCTGCATAACTTG+GGG | - | chr5.4:63756640-63756659 | None:intergenic | 45.0% | |
| GGGATTACTCGGCCTTTATA+AGG | + | chr5.4:63755726-63755745 | MS.gene50108:CDS | 45.0% | |
| GGTAACCGAGGGAATGATAT+AGG | - | chr5.4:63756690-63756709 | None:intergenic | 45.0% | |
| GGTTACCTTCACCTGATGTT+TGG | + | chr5.4:63756751-63756770 | MS.gene50108:intron | 45.0% | |
| GTCAAGGAAGAGGGATTACT+CGG | + | chr5.4:63755715-63755734 | MS.gene50108:CDS | 45.0% | |
| TATAAGGTTGTGCCTGGTGT+AGG | + | chr5.4:63757707-63757726 | MS.gene50108:CDS | 45.0% | |
| TCTGCATTAGCACCAGTAAG+TGG | - | chr5.4:63755833-63755852 | None:intergenic | 45.0% | |
| TGATTGAGAGAGAGATGGTG+GGG | + | chr5.4:63754930-63754949 | MS.gene50108:intron | 45.0% | |
| TTGAGGTATGCTTCTCACCT+AGG | + | chr5.4:63756730-63756749 | MS.gene50108:intron | 45.0% | |
| TTGTGGACTTAGCCACTTAC+TGG | + | chr5.4:63755818-63755837 | MS.gene50108:intron | 45.0% | |
| ! | ACTATTTCTCAGCTTCTCGC+CGG | + | chr5.4:63754014-63754033 | MS.gene50108:CDS | 45.0% |
| ! | CTCTCACATTTGGTAACCGA+GGG | - | chr5.4:63756701-63756720 | None:intergenic | 45.0% |
| ! | GTGAGAAGCATACCTCAAAG+AGG | - | chr5.4:63756728-63756747 | None:intergenic | 45.0% |
| ! | GTTGTTGTTAGTCTGGCTTG+TGG | + | chr5.4:63756048-63756067 | MS.gene50108:CDS | 45.0% |
| ! | TCAGGCATTGCATCATCAAC+AGG | + | chr5.4:63756078-63756097 | MS.gene50108:CDS | 45.0% |
| ! | TGGTGCTAATGCAGACTGTT+GGG | + | chr5.4:63755838-63755857 | MS.gene50108:intron | 45.0% |
| !! | AAGAGGGGTTTAGGGCTTTT+TGG | + | chr5.4:63755114-63755133 | MS.gene50108:CDS | 45.0% |
| !! | GGGTTTAGGGCTTTTTGGAA+AGG | + | chr5.4:63755119-63755138 | MS.gene50108:CDS | 45.0% |
| !!! | ACATTTTGTTGGTGGTGGGT+TGG | + | chr5.4:63755364-63755383 | MS.gene50108:CDS | 45.0% |
| AAGCCCTAAACCCCTCTTCA+TGG | - | chr5.4:63755112-63755131 | None:intergenic | 50.0% | |
| ACAAAGTTGCAAGCCTGCAC+TGG | - | chr5.4:63757308-63757327 | None:intergenic | 50.0% | |
| ACAAATTGCGGAGAGTCTCG+TGG | + | chr5.4:63757227-63757246 | MS.gene50108:intron | 50.0% | |
| AGACGGAGGAAGCAACTTGA+GGG | + | chr5.4:63757575-63757594 | MS.gene50108:CDS | 50.0% | |
| ATGCAAACGGAAGCTAGGGT+TGG | + | chr5.4:63753927-63753946 | MS.gene50108:CDS | 50.0% | |
| CCGCGTTCTTACAAGATCCA+AGG | - | chr5.4:63755420-63755439 | None:intergenic | 50.0% | |
| CCTCGGTTACCAAATGTGAG+AGG | + | chr5.4:63756699-63756718 | MS.gene50108:intron | 50.0% | |
| CTCGGCCTTTATAAGGGACT+TGG | + | chr5.4:63755733-63755752 | MS.gene50108:CDS | 50.0% | |
| TAGACGGAGGAAGCAACTTG+AGG | + | chr5.4:63757574-63757593 | MS.gene50108:CDS | 50.0% | |
| TCCGTCCAAACATCAGGTGA+AGG | - | chr5.4:63756759-63756778 | None:intergenic | 50.0% | |
| TGTATGTTCAGGCAGGCTTG+TGG | + | chr5.4:63757115-63757134 | MS.gene50108:intron | 50.0% | |
| ! | CCTCTCACATTTGGTAACCG+AGG | - | chr5.4:63756702-63756721 | None:intergenic | 50.0% |
| ! | CTGGTGCTAATGCAGACTGT+TGG | + | chr5.4:63755837-63755856 | MS.gene50108:intron | 50.0% |
| ! | GATTGAGAGAGAGATGGTGG+GGG | + | chr5.4:63754931-63754950 | MS.gene50108:intron | 50.0% |
| ! | GCAGCTGATTCCGTCACATA+AGG | + | chr5.4:63756648-63756667 | MS.gene50108:intron | 50.0% |
| !! | GGAAGCTAGGGTTGGTGTAA+CGG | + | chr5.4:63753935-63753954 | MS.gene50108:CDS | 50.0% |
| !! | TGTGAGAGGTGTCCTCTTTG+AGG | + | chr5.4:63756713-63756732 | MS.gene50108:intron | 50.0% |
| AACAACTCCATCCCGGTCTC+TGG | - | chr5.4:63756482-63756501 | None:intergenic | 55.0% | |
| ACGGAGGAAGCAACTTGAGG+GGG | + | chr5.4:63757577-63757596 | MS.gene50108:CDS | 55.0% | |
| ATTTCTCAGCTTCTCGCCGG+AGG | + | chr5.4:63754017-63754036 | MS.gene50108:CDS | 55.0% | |
| CGAGCGCGTGTGTACAATAC+AGG | + | chr5.4:63757608-63757627 | MS.gene50108:CDS | 55.0% | |
| GACGGAGGAAGCAACTTGAG+GGG | + | chr5.4:63757576-63757595 | MS.gene50108:CDS | 55.0% | |
| GGGACTTGGAACTACCCTCT+TGG | + | chr5.4:63755747-63755766 | MS.gene50108:CDS | 55.0% | |
| GGTTTGCGTGGCCTTTACAG+AGG | + | chr5.4:63757668-63757687 | MS.gene50108:CDS | 55.0% | |
| TAACGGTGGACGGTGGTGTT+CGG | + | chr5.4:63753952-63753971 | MS.gene50108:CDS | 55.0% | |
| TGACCCCTAGAACCAGAGAC+CGG | + | chr5.4:63756467-63756486 | MS.gene50108:intron | 55.0% | |
| TTCCGGTCAGAAGGTTTGCG+TGG | + | chr5.4:63757656-63757675 | MS.gene50108:CDS | 55.0% | |
| ! | CTGGCTTGTGGCAGTCTTTC+AGG | + | chr5.4:63756060-63756079 | MS.gene50108:CDS | 55.0% |
| ! | GGTGGGGGTACAGGTTATTG+AGG | + | chr5.4:63754946-63754965 | MS.gene50108:intron | 55.0% |
| !! | AGCTAGGGTTGGTGTAACGG+TGG | + | chr5.4:63753938-63753957 | MS.gene50108:CDS | 55.0% |
| !! | AGGGTTGGTGTAACGGTGGA+CGG | + | chr5.4:63753942-63753961 | MS.gene50108:CDS | 55.0% |
| !! | ATCCCGGTCTCTGGTTCTAG+GGG | - | chr5.4:63756473-63756492 | None:intergenic | 55.0% |
| !! | CATCCCGGTCTCTGGTTCTA+GGG | - | chr5.4:63756474-63756493 | None:intergenic | 55.0% |
| !! | TCTGGTTCTAGGGGTCAGTC+TGG | - | chr5.4:63756464-63756483 | None:intergenic | 55.0% |
| !! | TTTGTTGGTGGTGGGTTGGC+AGG | + | chr5.4:63755368-63755387 | MS.gene50108:CDS | 55.0% |
| AAGCAACTTGAGGGGGCTGG+TGG | + | chr5.4:63757584-63757603 | MS.gene50108:CDS | 60.0% | |
| AGGAAGCAACTTGAGGGGGC+TGG | + | chr5.4:63757581-63757600 | MS.gene50108:CDS | 60.0% | |
| CAAAGCTCCGGCAACTCCTC+CGG | - | chr5.4:63754036-63754055 | None:intergenic | 60.0% | |
| CAACCACCGCCGCAACAGAT+TGG | + | chr5.4:63753990-63754009 | MS.gene50108:CDS | 60.0% | |
| CCTAGAACCAGAGACCGGGA+TGG | + | chr5.4:63756472-63756491 | MS.gene50108:intron | 60.0% | |
| GACCCCTAGAACCAGAGACC+GGG | + | chr5.4:63756468-63756487 | MS.gene50108:intron | 60.0% | |
| GGCCACGCAAACCTTCTGAC+CGG | - | chr5.4:63757661-63757680 | None:intergenic | 60.0% | |
| GTTCCAATCTGTTGCGGCGG+TGG | - | chr5.4:63753996-63754015 | None:intergenic | 60.0% | |
| GTTGGTGTAACGGTGGACGG+TGG | + | chr5.4:63753945-63753964 | MS.gene50108:CDS | 60.0% | |
| ! | AGCAACTTGAGGGGGCTGGT+GGG | + | chr5.4:63757585-63757604 | MS.gene50108:CDS | 60.0% |
| !! | AAGAACGCGGCTTGCTGCAC+AGG | + | chr5.4:63755430-63755449 | MS.gene50108:CDS | 60.0% |
| !! | CCATCCCGGTCTCTGGTTCT+AGG | - | chr5.4:63756475-63756494 | None:intergenic | 60.0% |
| !! | GAGAGAGATGGTGGGGGTAC+AGG | + | chr5.4:63754937-63754956 | MS.gene50108:intron | 60.0% |
| CTTCTCGCCGGAGGAGTTGC+CGG | + | chr5.4:63754026-63754045 | MS.gene50108:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 63753927 | 63757790 | 63753927 | ID=MS.gene50108 |
| chr5.4 | mRNA | 63753927 | 63757790 | 63753927 | ID=MS.gene50108.t1;Parent=MS.gene50108 |
| chr5.4 | exon | 63753927 | 63754103 | 63753927 | ID=MS.gene50108.t1.exon1;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63753927 | 63754103 | 63753927 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| chr5.4 | exon | 63755038 | 63755214 | 63755038 | ID=MS.gene50108.t1.exon2;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63755038 | 63755214 | 63755038 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| chr5.4 | exon | 63755302 | 63755451 | 63755302 | ID=MS.gene50108.t1.exon3;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63755302 | 63755451 | 63755302 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| chr5.4 | exon | 63755667 | 63755768 | 63755667 | ID=MS.gene50108.t1.exon4;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63755667 | 63755768 | 63755667 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| chr5.4 | exon | 63755852 | 63755922 | 63755852 | ID=MS.gene50108.t1.exon5;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63755852 | 63755922 | 63755852 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| chr5.4 | exon | 63756032 | 63756099 | 63756032 | ID=MS.gene50108.t1.exon6;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63756032 | 63756099 | 63756032 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| chr5.4 | exon | 63757552 | 63757790 | 63757552 | ID=MS.gene50108.t1.exon7;Parent=MS.gene50108.t1 |
| chr5.4 | CDS | 63757552 | 63757790 | 63757552 | ID=cds.MS.gene50108.t1;Parent=MS.gene50108.t1 |
| Gene Sequence |
| Protein sequence |
