Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006012.01.T01 | XP_013470249.1 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 2.81E-177 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006012.01.T01 | Q9FNN6 | 54.545 | 187 | 69 | 3 | 25 | 200 | 12 | 193 | 2.07E-59 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006012.01.T01 | G7ZYT0 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 1.34e-177 | 496 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0180006012.01.T01 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048387.01 | MsG0180006012.01 | 0.801653 | 8.134086e-49 | 3.905611e-46 |
| MsG0080048754.01 | MsG0180006012.01 | -0.802229 | 6.195317e-49 | 3.018598e-46 |
| MsG0180000019.01 | MsG0180006012.01 | 0.851638 | 7.792589e-61 | 1.587372e-57 |
| MsG0180000089.01 | MsG0180006012.01 | 0.818820 | 1.605909e-52 | 1.214782e-49 |
| MsG0180000222.01 | MsG0180006012.01 | 0.829043 | 6.419280e-55 | 6.493492e-52 |
| MsG0180000337.01 | MsG0180006012.01 | 0.804372 | 2.229936e-49 | 1.147812e-46 |
| MsG0180000567.01 | MsG0180006012.01 | 0.815633 | 8.367327e-52 | 5.800124e-49 |
| MsG0180001053.01 | MsG0180006012.01 | 0.820531 | 6.530814e-53 | 5.180722e-50 |
| MsG0180002912.01 | MsG0180006012.01 | 0.830982 | 2.160484e-55 | 2.313094e-52 |
| MsG0180003241.01 | MsG0180006012.01 | 0.814961 | 1.180181e-51 | 8.031234e-49 |
| MsG0180004079.01 | MsG0180006012.01 | 0.839638 | 1.405743e-57 | 1.953202e-54 |
| MsG0180004110.01 | MsG0180006012.01 | 0.865550 | 5.444390e-65 | 1.778453e-61 |
| MsG0180004752.01 | MsG0180006012.01 | 0.882936 | 6.854801e-71 | 4.257883e-67 |
| MsG0180004761.01 | MsG0180006012.01 | -0.815987 | 6.974752e-52 | 4.881653e-49 |
| MsG0180004867.01 | MsG0180006012.01 | 0.865246 | 6.788311e-65 | 2.193489e-61 |
| MsG0180005125.01 | MsG0180006012.01 | 0.826467 | 2.669969e-54 | 2.505944e-51 |
| MsG0180005172.01 | MsG0180006012.01 | 0.808518 | 2.977003e-50 | 1.705766e-47 |
| MsG0180005331.01 | MsG0180006012.01 | 0.840312 | 9.379210e-58 | 1.330694e-54 |
| MsG0180006012.01 | MsG0180006016.01 | 0.823924 | 1.065747e-53 | 9.303574e-51 |
| MsG0180006012.01 | MsG0180006047.01 | 0.822961 | 1.790225e-53 | 1.520821e-50 |
| MsG0180006012.01 | MsG0180006069.01 | 0.832170 | 1.101432e-55 | 1.221278e-52 |
| MsG0180006012.01 | MsG0180006097.01 | 0.823395 | 1.417400e-53 | 1.218804e-50 |
| MsG0180006012.01 | MsG0180006226.01 | -0.850215 | 1.960750e-60 | 3.812957e-57 |
| MsG0180006012.01 | MsG0280006475.01 | -0.815966 | 7.051929e-52 | 4.932750e-49 |
| MsG0180006012.01 | MsG0280006974.01 | 0.813373 | 2.645284e-51 | 1.724490e-48 |
| MsG0180006012.01 | MsG0280007133.01 | -0.860009 | 2.784402e-63 | 7.500042e-60 |
| MsG0180006012.01 | MsG0280007191.01 | 0.800903 | 1.158701e-48 | 5.459448e-46 |
| MsG0180006012.01 | MsG0280007253.01 | 0.807327 | 5.336054e-50 | 2.963594e-47 |
| MsG0180006012.01 | MsG0280007272.01 | 0.818265 | 2.145391e-52 | 1.598168e-49 |
| MsG0180006012.01 | MsG0280007351.01 | 0.818697 | 1.712040e-52 | 1.290665e-49 |
| MsG0180006012.01 | MsG0280007369.01 | 0.822951 | 1.799298e-53 | 1.528121e-50 |
| MsG0180006012.01 | MsG0280007549.01 | 0.801595 | 8.360000e-49 | 4.008092e-46 |
| MsG0180006012.01 | MsG0280007751.01 | 0.808224 | 3.439645e-50 | 1.955771e-47 |
| MsG0180006012.01 | MsG0280007840.01 | 0.824139 | 9.491042e-54 | 8.335482e-51 |
| MsG0180006012.01 | MsG0280009235.01 | 0.819034 | 1.435676e-52 | 1.092545e-49 |
| MsG0180006012.01 | MsG0280009394.01 | 0.856352 | 3.409002e-62 | 8.113788e-59 |
| MsG0180006012.01 | MsG0280009610.01 | 0.822791 | 1.960903e-53 | 1.657836e-50 |
| MsG0180006012.01 | MsG0280009838.01 | 0.819886 | 9.175229e-53 | 7.149532e-50 |
| MsG0180006012.01 | MsG0280010275.01 | -0.811525 | 6.703490e-51 | 4.159099e-48 |
| MsG0180006012.01 | MsG0280010276.01 | -0.813284 | 2.766607e-51 | 1.799101e-48 |
| MsG0180006012.01 | MsG0280010416.01 | 0.802824 | 4.669292e-49 | 2.310063e-46 |
| MsG0180006012.01 | MsG0280010695.01 | -0.805120 | 1.555807e-49 | 8.164292e-47 |
| MsG0180006012.01 | MsG0280011152.01 | 0.837153 | 6.146826e-57 | 7.914868e-54 |
| MsG0180006012.01 | MsG0280011288.01 | 0.827149 | 1.834816e-54 | 1.756417e-51 |
| MsG0180006012.01 | MsG0280011473.01 | 0.857709 | 1.357074e-62 | 3.379981e-59 |
| MsG0180006012.01 | MsG0380013957.01 | -0.801211 | 1.002171e-48 | 4.758723e-46 |
| MsG0180006012.01 | MsG0380014680.01 | 0.835994 | 1.213694e-56 | 1.509156e-53 |
| MsG0180006012.01 | MsG0380015245.01 | 0.823930 | 1.062129e-53 | 9.273731e-51 |
| MsG0180006012.01 | MsG0380016273.01 | 0.801382 | 9.243288e-49 | 4.408047e-46 |
| MsG0180006012.01 | MsG0380016367.01 | -0.844960 | 5.470108e-59 | 8.977625e-56 |
| MsG0180006012.01 | MsG0380017067.01 | 0.806083 | 9.770017e-50 | 5.255158e-47 |
| MsG0180006012.01 | MsG0380017158.01 | 0.839617 | 1.423642e-57 | 1.976767e-54 |
| MsG0180006012.01 | MsG0380017550.01 | 0.818757 | 1.659446e-52 | 1.253167e-49 |
| MsG0180006012.01 | MsG0480018333.01 | 0.855209 | 7.355127e-62 | 1.685033e-58 |
| MsG0180006012.01 | MsG0480018500.01 | 0.820156 | 7.960210e-53 | 6.249770e-50 |
| MsG0180006012.01 | MsG0480018998.01 | 0.803277 | 3.764933e-49 | 1.884107e-46 |
| MsG0180006012.01 | MsG0480019036.01 | 0.805663 | 1.197132e-49 | 6.370327e-47 |
| MsG0180006012.01 | MsG0480019038.01 | 0.877858 | 4.484720e-69 | 2.290584e-65 |
| MsG0180006012.01 | MsG0480019295.01 | 0.824524 | 7.705522e-54 | 6.842231e-51 |
| MsG0180006012.01 | MsG0480019880.01 | 0.881267 | 2.766721e-70 | 1.610036e-66 |
| MsG0180006012.01 | MsG0480020372.01 | 0.804930 | 1.705028e-49 | 8.904236e-47 |
| MsG0180006012.01 | MsG0480020444.01 | 0.850872 | 1.281810e-60 | 2.546775e-57 |
| MsG0180006012.01 | MsG0480020445.01 | 0.821079 | 4.885220e-53 | 3.935282e-50 |
| MsG0180006012.01 | MsG0480021298.01 | 0.841992 | 3.393143e-58 | 5.072973e-55 |
| MsG0180006012.01 | MsG0480021642.01 | 0.835181 | 1.948299e-56 | 2.364145e-53 |
| MsG0180006012.01 | MsG0480022274.01 | 0.822188 | 2.708026e-53 | 2.250344e-50 |
| MsG0180006012.01 | MsG0480022479.01 | 0.806369 | 8.507812e-50 | 4.609556e-47 |
| MsG0180006012.01 | MsG0480022480.01 | 0.842455 | 2.559861e-58 | 3.883693e-55 |
| MsG0180006012.01 | MsG0480022486.01 | 0.822911 | 1.838782e-53 | 1.559938e-50 |
| MsG0180006012.01 | MsG0480022760.01 | 0.833666 | 4.677850e-56 | 5.423897e-53 |
| MsG0180006012.01 | MsG0480023088.01 | 0.831631 | 1.496395e-55 | 1.633188e-52 |
| MsG0180006012.01 | MsG0480023318.01 | 0.867668 | 1.155123e-65 | 4.065798e-62 |
| MsG0180006012.01 | MsG0480023417.01 | 0.804990 | 1.656943e-49 | 8.665826e-47 |
| MsG0180006012.01 | MsG0480023490.01 | 0.839987 | 1.140437e-57 | 1.602069e-54 |
| MsG0180006012.01 | MsG0480023517.01 | 0.813886 | 2.039636e-51 | 1.348257e-48 |
| MsG0180006012.01 | MsG0480023947.01 | 0.812837 | 3.467388e-51 | 2.227741e-48 |
| MsG0180006012.01 | MsG0580024204.01 | 0.814410 | 1.562578e-51 | 1.047749e-48 |
| MsG0180006012.01 | MsG0580024407.01 | 0.809569 | 1.773637e-50 | 1.045012e-47 |
| MsG0180006012.01 | MsG0580024871.01 | 0.830545 | 2.764787e-55 | 2.921880e-52 |
| MsG0180006012.01 | MsG0580024999.01 | 0.861168 | 1.240328e-63 | 3.476763e-60 |
| MsG0180006012.01 | MsG0580025134.01 | 0.806332 | 8.659962e-50 | 4.687702e-47 |
| MsG0180006012.01 | MsG0580027073.01 | 0.823898 | 1.080871e-53 | 9.428784e-51 |
| MsG0180006012.01 | MsG0580027074.01 | 0.802785 | 4.757281e-49 | 2.351143e-46 |
| MsG0180006012.01 | MsG0580027129.01 | 0.814017 | 1.908219e-51 | 1.265871e-48 |
| MsG0180006012.01 | MsG0580027227.01 | 0.822321 | 2.522381e-53 | 2.104246e-50 |
| MsG0180006012.01 | MsG0580027345.01 | 0.861422 | 1.037556e-63 | 2.934619e-60 |
| MsG0180006012.01 | MsG0580027733.01 | 0.810546 | 1.092407e-50 | 6.603582e-48 |
| MsG0180006012.01 | MsG0580028355.01 | 0.879960 | 8.131299e-70 | 4.498930e-66 |
| MsG0180006012.01 | MsG0580028560.01 | 0.827888 | 1.220021e-54 | 1.193331e-51 |
| MsG0180006012.01 | MsG0580029583.01 | 0.802408 | 5.689216e-49 | 2.784856e-46 |
| MsG0180006012.01 | MsG0580029798.01 | 0.844608 | 6.805412e-59 | 1.104574e-55 |
| MsG0180006012.01 | MsG0580029901.01 | 0.840387 | 8.964488e-58 | 1.274973e-54 |
| MsG0180006012.01 | MsG0580029906.01 | 0.827287 | 1.700521e-54 | 1.634535e-51 |
| MsG0180006012.01 | MsG0580029930.01 | 0.845672 | 3.510250e-59 | 5.894499e-56 |
| MsG0180006012.01 | MsG0680031055.01 | 0.801447 | 8.963905e-49 | 4.281857e-46 |
| MsG0180006012.01 | MsG0680033971.01 | 0.818427 | 1.971820e-52 | 1.475610e-49 |
| MsG0180006012.01 | MsG0680034395.01 | 0.816234 | 6.143032e-52 | 4.328585e-49 |
| MsG0180006012.01 | MsG0680035741.01 | 0.807641 | 4.578090e-50 | 2.563305e-47 |
| MsG0180006012.01 | MsG0680035777.01 | 0.854082 | 1.559818e-61 | 3.443596e-58 |
| MsG0180006012.01 | MsG0780037258.01 | 0.816040 | 6.788831e-52 | 4.758522e-49 |
| MsG0180006012.01 | MsG0780037599.01 | 0.874325 | 7.376148e-68 | 3.306088e-64 |
| MsG0180006012.01 | MsG0780037895.01 | 0.802001 | 6.901580e-49 | 3.343198e-46 |
| MsG0180006012.01 | MsG0780038123.01 | 0.837183 | 6.041298e-57 | 7.786095e-54 |
| MsG0180006012.01 | MsG0780038135.01 | 0.841999 | 3.378355e-58 | 5.051963e-55 |
| MsG0180006012.01 | MsG0780038444.01 | 0.818658 | 1.747109e-52 | 1.315680e-49 |
| MsG0180006012.01 | MsG0780039354.01 | -0.848301 | 6.688165e-60 | 1.222008e-56 |
| MsG0180006012.01 | MsG0780039472.01 | 0.821991 | 3.007858e-53 | 2.485547e-50 |
| MsG0180006012.01 | MsG0780039877.01 | 0.851376 | 9.240116e-61 | 1.866694e-57 |
| MsG0180006012.01 | MsG0780040144.01 | 0.877397 | 6.495876e-69 | 3.261696e-65 |
| MsG0180006012.01 | MsG0780040442.01 | 0.811502 | 6.779956e-51 | 4.204113e-48 |
| MsG0180006012.01 | MsG0780040505.01 | 0.833195 | 6.130978e-56 | 7.009566e-53 |
| MsG0180006012.01 | MsG0780040713.01 | 0.801848 | 7.417499e-49 | 3.579344e-46 |
| MsG0180006012.01 | MsG0780041014.01 | -0.813966 | 1.958885e-51 | 1.297657e-48 |
| MsG0180006012.01 | MsG0780041357.01 | 0.876375 | 1.467592e-68 | 7.097851e-65 |
| MsG0180006012.01 | MsG0780041380.01 | 0.817385 | 3.389390e-52 | 2.464855e-49 |
| MsG0180006012.01 | MsG0880041985.01 | 0.890663 | 8.039928e-74 | 6.824659e-70 |
| MsG0180006012.01 | MsG0880042494.01 | 0.824883 | 6.341813e-54 | 5.690260e-51 |
| MsG0180006012.01 | MsG0880042811.01 | 0.833522 | 5.080401e-56 | 5.865683e-53 |
| MsG0180006012.01 | MsG0880042843.01 | 0.838807 | 2.308473e-57 | 3.126963e-54 |
| MsG0180006012.01 | MsG0880042957.01 | 0.825362 | 4.885545e-54 | 4.443323e-51 |
| MsG0180006012.01 | MsG0880042967.01 | 0.841586 | 4.345001e-58 | 6.413886e-55 |
| MsG0180006012.01 | MsG0880043285.01 | 0.865036 | 7.899908e-65 | 2.534294e-61 |
| MsG0180006012.01 | MsG0880043286.01 | 0.823624 | 1.253198e-53 | 1.084768e-50 |
| MsG0180006012.01 | MsG0880043685.01 | 0.871179 | 8.322990e-67 | 3.325496e-63 |
| MsG0180006012.01 | MsG0880043715.01 | 0.892795 | 1.141529e-74 | 1.058967e-70 |
| MsG0180006012.01 | MsG0880043745.01 | 0.815428 | 9.292770e-52 | 6.405148e-49 |
| MsG0180006012.01 | MsG0880044100.01 | 0.813913 | 2.012201e-51 | 1.331031e-48 |
| MsG0180006012.01 | MsG0880045277.01 | 0.834030 | 3.793300e-56 | 4.446664e-53 |
| MsG0180006012.01 | MsG0880045290.01 | 0.827919 | 1.198929e-54 | 1.173771e-51 |
| MsG0180006012.01 | MsG0880045819.01 | 0.805012 | 1.638929e-49 | 8.576466e-47 |
| MsG0180006012.01 | MsG0880045907.01 | 0.813049 | 3.116247e-51 | 2.013562e-48 |
| MsG0180006012.01 | MsG0880046099.01 | -0.818517 | 1.880677e-52 | 1.410868e-49 |
| MsG0180006012.01 | MsG0880046113.01 | 0.812122 | 4.969860e-51 | 3.133034e-48 |
| MsG0180006012.01 | MsG0880046226.01 | 0.824268 | 8.849868e-54 | 7.800387e-51 |
| MsG0180006012.01 | MsG0880046251.01 | -0.867391 | 1.417256e-65 | 4.940795e-62 |
| MsG0180006012.01 | MsG0880046329.01 | 0.828350 | 9.441227e-55 | 9.359865e-52 |
| MsG0180006012.01 | MsG0880046467.01 | 0.821368 | 4.191141e-53 | 3.403048e-50 |
| MsG0180006012.01 | MsG0880046586.01 | 0.812127 | 4.957304e-51 | 3.125611e-48 |
| MsG0180006012.01 | MsG0880046642.01 | 0.817998 | 2.464725e-52 | 1.822734e-49 |
| MsG0180006012.01 | MsG0880046753.01 | 0.811093 | 8.316840e-51 | 5.101651e-48 |
| MsG0180006012.01 | MsG0880047081.01 | 0.840371 | 9.055186e-58 | 1.287183e-54 |
| MsG0180006012.01 | MsG0880047497.01 | 0.818237 | 2.177088e-52 | 1.620500e-49 |
| MsG0180006012.01 | MsG0880047531.01 | 0.844951 | 5.500829e-59 | 9.025583e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006012.01.T01 | MTR_1g111830 | 97.959 | 245 | 4 | 1 | 1 | 245 | 1 | 244 | 0.0 | 496 |
| MsG0180006012.01.T01 | MTR_3g462790 | 44.578 | 249 | 108 | 8 | 23 | 245 | 41 | 285 | 5.44e-59 | 189 |
| MsG0180006012.01.T01 | MTR_5g069710 | 50.282 | 177 | 79 | 2 | 23 | 193 | 27 | 200 | 1.02e-55 | 181 |
| MsG0180006012.01.T01 | MTR_7g067080 | 49.206 | 189 | 79 | 4 | 23 | 200 | 33 | 215 | 1.12e-54 | 178 |
| MsG0180006012.01.T01 | MTR_5g081860 | 49.189 | 185 | 80 | 4 | 23 | 200 | 25 | 202 | 1.24e-54 | 177 |
| MsG0180006012.01.T01 | MTR_4g111975 | 46.500 | 200 | 77 | 3 | 25 | 194 | 8 | 207 | 8.02e-54 | 176 |
| MsG0180006012.01.T01 | MTR_8g063600 | 51.892 | 185 | 73 | 3 | 23 | 200 | 8 | 183 | 1.57e-53 | 174 |
| MsG0180006012.01.T01 | MTR_8g063870 | 45.556 | 180 | 80 | 2 | 23 | 200 | 6 | 169 | 1.39e-45 | 154 |
| MsG0180006012.01.T01 | MTR_4g100630 | 52.800 | 125 | 43 | 2 | 94 | 202 | 49 | 173 | 1.25e-35 | 129 |
| MsG0180006012.01.T01 | MTR_2g100930 | 62.222 | 90 | 33 | 1 | 120 | 208 | 104 | 193 | 6.31e-33 | 122 |
| MsG0180006012.01.T01 | MTR_5g075760 | 40.526 | 190 | 97 | 8 | 24 | 209 | 12 | 189 | 1.09e-32 | 119 |
| MsG0180006012.01.T01 | MTR_5g075790 | 40.415 | 193 | 92 | 8 | 24 | 209 | 21 | 197 | 1.68e-31 | 115 |
| MsG0180006012.01.T01 | MTR_8g101650 | 62.069 | 87 | 32 | 1 | 103 | 189 | 83 | 168 | 2.34e-30 | 114 |
| MsG0180006012.01.T01 | MTR_6g092540 | 71.429 | 70 | 20 | 0 | 120 | 189 | 92 | 161 | 2.75e-30 | 114 |
| MsG0180006012.01.T01 | MTR_5g037080 | 68.421 | 76 | 24 | 0 | 116 | 191 | 93 | 168 | 5.19e-27 | 106 |
| MsG0180006012.01.T01 | MTR_4g107230 | 65.169 | 89 | 29 | 2 | 118 | 206 | 77 | 163 | 4.74e-26 | 103 |
| MsG0180006012.01.T01 | MTR_1g033600 | 42.308 | 130 | 65 | 2 | 23 | 142 | 10 | 139 | 4.45e-25 | 96.7 |
| MsG0180006012.01.T01 | MTR_1g033620 | 75.000 | 60 | 15 | 0 | 141 | 200 | 21 | 80 | 1.79e-24 | 98.2 |
| MsG0180006012.01.T01 | MTR_0036s0260 | 64.179 | 67 | 24 | 0 | 125 | 191 | 28 | 94 | 2.51e-24 | 96.7 |
| MsG0180006012.01.T01 | MTR_5g088010 | 40.000 | 155 | 70 | 6 | 73 | 210 | 11 | 159 | 3.66e-24 | 97.4 |
| MsG0180006012.01.T01 | MTR_5g027570 | 41.304 | 138 | 68 | 5 | 86 | 219 | 56 | 184 | 5.32e-24 | 96.7 |
| MsG0180006012.01.T01 | MTR_2g090305 | 65.672 | 67 | 23 | 0 | 125 | 191 | 28 | 94 | 1.84e-23 | 94.0 |
| MsG0180006012.01.T01 | MTR_3g104370 | 64.789 | 71 | 22 | 2 | 122 | 189 | 88 | 158 | 2.60e-23 | 94.7 |
| MsG0180006012.01.T01 | MTR_5g088060 | 65.672 | 67 | 20 | 1 | 127 | 190 | 274 | 340 | 2.09e-22 | 95.5 |
| MsG0180006012.01.T01 | MTR_5g488160 | 65.672 | 67 | 20 | 1 | 127 | 190 | 274 | 340 | 2.09e-22 | 95.5 |
| MsG0180006012.01.T01 | MTR_4g015130 | 56.338 | 71 | 28 | 1 | 135 | 202 | 3 | 73 | 6.34e-22 | 86.7 |
| MsG0180006012.01.T01 | MTR_5g027550 | 48.387 | 93 | 44 | 2 | 115 | 203 | 67 | 159 | 3.97e-18 | 80.9 |
| MsG0180006012.01.T01 | MTR_1g048660 | 51.562 | 64 | 31 | 0 | 126 | 189 | 13 | 76 | 3.04e-17 | 74.7 |
| MsG0180006012.01.T01 | MTR_1g022290 | 42.254 | 71 | 41 | 0 | 25 | 95 | 7 | 77 | 5.83e-16 | 71.2 |
| MsG0180006012.01.T01 | MTR_8g051670 | 85.417 | 48 | 7 | 0 | 1 | 48 | 1 | 48 | 8.31e-16 | 69.7 |
| MsG0180006012.01.T01 | MTR_3g116720 | 47.619 | 63 | 33 | 0 | 25 | 87 | 16 | 78 | 1.44e-15 | 70.1 |
| MsG0180006012.01.T01 | MTR_3g111880 | 41.667 | 72 | 42 | 0 | 23 | 94 | 5 | 76 | 3.72e-15 | 69.3 |
| MsG0180006012.01.T01 | MTR_5g020170 | 44.928 | 69 | 38 | 0 | 19 | 87 | 13 | 81 | 1.31e-14 | 67.8 |
| MsG0180006012.01.T01 | MTR_1g083180 | 52.055 | 73 | 31 | 2 | 127 | 196 | 63 | 134 | 7.01e-14 | 68.2 |
| MsG0180006012.01.T01 | MTR_6g004250 | 43.284 | 67 | 38 | 0 | 23 | 89 | 8 | 74 | 7.42e-14 | 65.5 |
| MsG0180006012.01.T01 | MTR_3g070110 | 34.014 | 147 | 73 | 5 | 68 | 193 | 27 | 170 | 2.66e-13 | 67.4 |
| MsG0180006012.01.T01 | MTR_7g089210 | 50.000 | 58 | 29 | 0 | 30 | 87 | 17 | 74 | 3.96e-13 | 63.5 |
| MsG0180006012.01.T01 | MTR_3g013440 | 40.909 | 66 | 38 | 1 | 25 | 89 | 10 | 75 | 4.50e-12 | 60.8 |
| MsG0180006012.01.T01 | MTR_3g111920 | 33.333 | 90 | 52 | 2 | 25 | 114 | 3 | 84 | 3.28e-11 | 58.5 |
| MsG0180006012.01.T01 | MTR_8g077360 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 4.66e-11 | 57.8 |
| MsG0180006012.01.T01 | MTR_8g077380 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 5.58e-11 | 57.4 |
| MsG0180006012.01.T01 | MTR_8g077390 | 40.000 | 65 | 38 | 1 | 23 | 87 | 3 | 66 | 5.58e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006012.01.T01 | AT5G04760 | 58.296 | 223 | 82 | 4 | 23 | 245 | 4 | 215 | 2.52e-80 | 240 |
| MsG0180006012.01.T01 | AT5G08520 | 54.545 | 187 | 69 | 3 | 25 | 200 | 12 | 193 | 2.11e-60 | 192 |
| MsG0180006012.01.T01 | AT3G11280 | 51.497 | 167 | 75 | 2 | 25 | 191 | 33 | 193 | 2.55e-55 | 178 |
| MsG0180006012.01.T01 | AT3G11280 | 51.497 | 167 | 75 | 2 | 25 | 191 | 33 | 193 | 2.55e-55 | 178 |
| MsG0180006012.01.T01 | AT2G38090 | 40.000 | 260 | 130 | 6 | 6 | 243 | 7 | 262 | 9.26e-55 | 178 |
| MsG0180006012.01.T01 | AT5G58900 | 47.778 | 180 | 79 | 2 | 25 | 193 | 34 | 209 | 2.61e-53 | 174 |
| MsG0180006012.01.T01 | AT5G05790 | 46.591 | 176 | 88 | 2 | 21 | 193 | 27 | 199 | 5.18e-53 | 173 |
| MsG0180006012.01.T01 | AT5G05790 | 46.591 | 176 | 88 | 2 | 21 | 193 | 27 | 199 | 5.18e-53 | 173 |
| MsG0180006012.01.T01 | AT1G49010 | 45.175 | 228 | 87 | 7 | 25 | 226 | 8 | 223 | 6.32e-53 | 174 |
| MsG0180006012.01.T01 | AT5G01200 | 40.376 | 213 | 103 | 5 | 1 | 193 | 6 | 214 | 2.66e-45 | 152 |
| MsG0180006012.01.T01 | AT5G23650 | 40.359 | 223 | 111 | 3 | 23 | 229 | 11 | 227 | 4.07e-45 | 154 |
| MsG0180006012.01.T01 | AT3G10580 | 44.550 | 211 | 93 | 6 | 25 | 234 | 8 | 195 | 1.79e-43 | 147 |
| MsG0180006012.01.T01 | AT3G10580 | 44.550 | 211 | 93 | 6 | 25 | 234 | 8 | 195 | 3.71e-43 | 148 |
| MsG0180006012.01.T01 | AT4G09450 | 49.102 | 167 | 69 | 3 | 24 | 190 | 6 | 156 | 5.54e-42 | 142 |
| MsG0180006012.01.T01 | AT5G47390 | 66.265 | 83 | 26 | 1 | 120 | 202 | 91 | 171 | 5.74e-32 | 120 |
| MsG0180006012.01.T01 | AT5G61620 | 51.724 | 116 | 54 | 1 | 80 | 193 | 61 | 176 | 4.57e-29 | 112 |
| MsG0180006012.01.T01 | AT5G56840 | 65.432 | 81 | 24 | 2 | 120 | 196 | 86 | 166 | 8.91e-29 | 108 |
| MsG0180006012.01.T01 | AT1G70000 | 73.333 | 75 | 20 | 0 | 116 | 190 | 89 | 163 | 1.22e-28 | 109 |
| MsG0180006012.01.T01 | AT1G70000 | 73.333 | 75 | 20 | 0 | 116 | 190 | 89 | 163 | 1.22e-28 | 109 |
| MsG0180006012.01.T01 | AT3G16350 | 50.000 | 122 | 52 | 3 | 110 | 229 | 125 | 239 | 2.09e-25 | 103 |
| MsG0180006012.01.T01 | AT3G10590 | 38.021 | 192 | 106 | 7 | 24 | 208 | 6 | 191 | 6.43e-25 | 98.2 |
| MsG0180006012.01.T01 | AT1G19000 | 50.847 | 118 | 51 | 2 | 74 | 191 | 58 | 168 | 8.61e-24 | 97.1 |
| MsG0180006012.01.T01 | AT1G19000 | 50.847 | 118 | 51 | 2 | 74 | 191 | 58 | 168 | 8.61e-24 | 97.1 |
| MsG0180006012.01.T01 | AT3G10585 | 38.323 | 167 | 67 | 4 | 25 | 190 | 7 | 138 | 1.60e-23 | 93.6 |
| MsG0180006012.01.T01 | AT1G74840 | 65.333 | 75 | 26 | 0 | 117 | 191 | 88 | 162 | 7.38e-23 | 93.6 |
| MsG0180006012.01.T01 | AT1G74840 | 65.333 | 75 | 26 | 0 | 117 | 191 | 88 | 162 | 1.07e-22 | 94.0 |
| MsG0180006012.01.T01 | AT3G10595 | 31.792 | 173 | 85 | 6 | 25 | 195 | 6 | 147 | 1.95e-18 | 80.5 |
| MsG0180006012.01.T01 | AT1G75250 | 42.667 | 75 | 41 | 1 | 13 | 87 | 2 | 74 | 1.27e-16 | 73.2 |
| MsG0180006012.01.T01 | AT1G75250 | 42.667 | 75 | 41 | 1 | 13 | 87 | 2 | 74 | 2.14e-16 | 73.6 |
| MsG0180006012.01.T01 | AT4G39250 | 39.474 | 76 | 46 | 0 | 25 | 100 | 14 | 89 | 1.97e-15 | 70.1 |
| MsG0180006012.01.T01 | AT2G18328 | 50.000 | 60 | 30 | 0 | 30 | 89 | 16 | 75 | 3.55e-13 | 63.5 |
| MsG0180006012.01.T01 | AT2G21650 | 41.096 | 73 | 43 | 0 | 25 | 97 | 14 | 86 | 3.57e-12 | 61.6 |
| MsG0180006012.01.T01 | AT1G19510 | 44.068 | 59 | 33 | 0 | 29 | 87 | 16 | 74 | 4.79e-12 | 61.2 |
| MsG0180006012.01.T01 | AT4G36570 | 59.091 | 44 | 18 | 0 | 25 | 68 | 12 | 55 | 3.71e-11 | 57.4 |
Find 92 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTACTGCTTTGCTATT+TGG | 0.108905 | 1:+98816625 | MsG0180006012.01.T01:three_prime_UTR |
| CTTATTGGGCTGACCAAATT+TGG | 0.115459 | 1:+98816084 | MsG0180006012.01.T01:CDS |
| CCAATCTCCTTTCCCAAATT+TGG | 0.134856 | 1:-98816097 | None:intergenic |
| CTGTGCAGGCTGTTTCTTAT+TGG | 0.143950 | 1:+98816069 | MsG0180006012.01.T01:intron |
| GTAAGTCTGCGACGGAAATT+AGG | 0.198649 | 1:+98815024 | MsG0180006012.01.T01:CDS |
| TCTCTTTCTTCACCGAATTC+TGG | 0.216560 | 1:-98816197 | None:intergenic |
| GCATATGGGTATTCAAATTA+TGG | 0.241889 | 1:+98816381 | MsG0180006012.01.T01:CDS |
| TATAGTTACTTAAAACAAAT+AGG | 0.257836 | 1:+98816550 | MsG0180006012.01.T01:three_prime_UTR |
| CTGTGCCTATTGATCAGAAC+TGG | 0.289180 | 1:+98816271 | MsG0180006012.01.T01:CDS |
| TGTGCAGGCTGTTTCTTATT+GGG | 0.291908 | 1:+98816070 | MsG0180006012.01.T01:intron |
| CCAAATTTGGGAAAGGAGAT+TGG | 0.329445 | 1:+98816097 | MsG0180006012.01.T01:CDS |
| CCGCGTCGTGGCGGCGGTGG+TGG | 0.329644 | 1:-98814883 | None:intergenic |
| GTTGATAATTAAATTATTAG+TGG | 0.352552 | 1:+98816526 | MsG0180006012.01.T01:three_prime_UTR |
| TGATATACTGGAAATTGATT+CGG | 0.359965 | 1:+98815070 | MsG0180006012.01.T01:CDS |
| TGGTGGTGGATTGGCTGAAT+GGG | 0.366393 | 1:+98815136 | MsG0180006012.01.T01:CDS |
| AGCTTTGGTTCATGATATAC+TGG | 0.372414 | 1:+98815058 | MsG0180006012.01.T01:CDS |
| CAGGATCAAATGAGTGCATA+TGG | 0.389179 | 1:+98816366 | MsG0180006012.01.T01:CDS |
| ATAGTTACTTAAAACAAATA+GGG | 0.389710 | 1:+98816551 | MsG0180006012.01.T01:three_prime_UTR |
| GATGGTGCCGGAGGATTTAC+CGG | 0.392546 | 1:+98814968 | MsG0180006012.01.T01:CDS |
| TAGGGATCACTATGAAGCTT+TGG | 0.393734 | 1:+98815043 | MsG0180006012.01.T01:CDS |
| GTGGTGGTGGATTGGCTGAA+TGG | 0.393857 | 1:+98815135 | MsG0180006012.01.T01:CDS |
| CGGCCACCGCGTCGTGGCGG+CGG | 0.396563 | 1:-98814889 | None:intergenic |
| TTATTGGGCTGACCAAATTT+GGG | 0.397453 | 1:+98816085 | MsG0180006012.01.T01:CDS |
| AATTGATTCGGGTCGGGTTG+AGG | 0.401169 | 1:+98815082 | MsG0180006012.01.T01:CDS |
| TCTTCGAATCAAATTTCGTT+TGG | 0.406289 | 1:+98815161 | MsG0180006012.01.T01:CDS |
| GTACTTTCTTCGCCAGAATT+CGG | 0.412820 | 1:+98816185 | MsG0180006012.01.T01:CDS |
| CAGAACTGGGTTCCTCCTCC+TGG | 0.418709 | 1:+98816285 | MsG0180006012.01.T01:CDS |
| CCACCGCGTCGTGGCGGCGG+TGG | 0.422019 | 1:-98814886 | None:intergenic |
| GATATACTGGAAATTGATTC+GGG | 0.424201 | 1:+98815071 | MsG0180006012.01.T01:CDS |
| GGAACCCAGTTCTGATCAAT+AGG | 0.426296 | 1:-98816276 | None:intergenic |
| GTTCGAGCGAGCTCTGTTGA+TGG | 0.427794 | 1:+98814950 | MsG0180006012.01.T01:CDS |
| TAAGTCTGCGACGGAAATTA+GGG | 0.429071 | 1:+98815025 | MsG0180006012.01.T01:CDS |
| CTGTGTTCTTCTTCAGTCCA+TGG | 0.441575 | 1:-98815230 | None:intergenic |
| TTATCCGTCAAACGATTTGC+AGG | 0.442120 | 1:+98816347 | MsG0180006012.01.T01:CDS |
| TGATCCTGCAAATCGTTTGA+CGG | 0.446093 | 1:-98816351 | None:intergenic |
| ATTTCCGTCGCAGACTTACC+TGG | 0.452535 | 1:-98815020 | None:intergenic |
| TCCGAGTTATTCTGATGAAT+CGG | 0.462771 | 1:+98815106 | MsG0180006012.01.T01:CDS |
| TGGGTTCCTCCTCCTGGTGG+TGG | 0.475189 | 1:+98816291 | MsG0180006012.01.T01:CDS |
| AAGATCGCGGAACAAGTTCC+AGG | 0.479111 | 1:+98815002 | MsG0180006012.01.T01:CDS |
| AAACGACAAAATAGATGTAT+CGG | 0.481957 | 1:+98814841 | MsG0180006012.01.T01:exon |
| GAATCGGCTGTGAGTGGTGG+TGG | 0.484996 | 1:+98815122 | MsG0180006012.01.T01:CDS |
| ACTGGAAATTGATTCGGGTC+GGG | 0.496104 | 1:+98815076 | MsG0180006012.01.T01:CDS |
| GAGATTGGAGAAGCATTTCA+AGG | 0.497665 | 1:+98816112 | MsG0180006012.01.T01:CDS |
| GTTGAATTCAAAAGGTGTGA+TGG | 0.505062 | 1:-98814813 | None:intergenic |
| GCGATCTTCTCCCACCGGTC+CGG | 0.507834 | 1:-98814987 | None:intergenic |
| GGCTGTGAGTGGTGGTGGAT+TGG | 0.511900 | 1:+98815127 | MsG0180006012.01.T01:CDS |
| TACTGGAAATTGATTCGGGT+CGG | 0.512665 | 1:+98815075 | MsG0180006012.01.T01:CDS |
| CACCGGTCCGGTAAATCCTC+CGG | 0.521987 | 1:-98814975 | None:intergenic |
| CCACCACCGCCGCCACGACG+CGG | 0.524799 | 1:+98814883 | MsG0180006012.01.T01:CDS |
| GCGAGCTCTGTTGATGGTGC+CGG | 0.528587 | 1:+98814956 | MsG0180006012.01.T01:CDS |
| GTATCGGGAGTCAGTTGCTA+TGG | 0.535551 | 1:+98814857 | MsG0180006012.01.T01:CDS |
| TGTTGCATTGAACCACCACC+AGG | 0.537371 | 1:-98816303 | None:intergenic |
| AACGACAAAATAGATGTATC+GGG | 0.540302 | 1:+98814842 | MsG0180006012.01.T01:exon |
| GTCCACTGAGTTGGTTGAGT+CGG | 0.541227 | 1:-98814909 | None:intergenic |
| TCGTTATCACCGCCATGTCT+CGG | 0.543106 | 1:-98815191 | None:intergenic |
| GGTGATAACGAGAGGAAGAA+AGG | 0.548667 | 1:+98815203 | MsG0180006012.01.T01:CDS |
| CGGAGGATTTACCGGACCGG+TGG | 0.556040 | 1:+98814976 | MsG0180006012.01.T01:CDS |
| TTTGGTTCGAAGCCGAGACA+TGG | 0.569715 | 1:+98815179 | MsG0180006012.01.T01:CDS |
| GTTCCGCGATCTTCTCCCAC+CGG | 0.572597 | 1:-98814992 | None:intergenic |
| AACTGGGTTCCTCCTCCTGG+TGG | 0.574702 | 1:+98816288 | MsG0180006012.01.T01:CDS |
| GGGCTGACCAAATTTGGGAA+AGG | 0.576808 | 1:+98816090 | MsG0180006012.01.T01:CDS |
| CTCGCTCGAACAGCTTGTCA+TGG | 0.578069 | 1:-98814938 | None:intergenic |
| CAGTTCTGATCAATAGGCAC+AGG | 0.581958 | 1:-98816270 | None:intergenic |
| GCATGGCTAGCCACCTGAGT+TGG | 0.585938 | 1:-98816156 | None:intergenic |
| TGCCGGAGGATTTACCGGAC+CGG | 0.588914 | 1:+98814973 | MsG0180006012.01.T01:CDS |
| TGGTCTCGAGTCCACTGAGT+TGG | 0.594247 | 1:-98814918 | None:intergenic |
| TGTGACAAGAACACCAACTC+AGG | 0.595788 | 1:+98816143 | MsG0180006012.01.T01:CDS |
| AGCTCTGTTGATGGTGCCGG+AGG | 0.598113 | 1:+98814959 | MsG0180006012.01.T01:CDS |
| AGTCGGCCACCGCGTCGTGG+CGG | 0.599166 | 1:-98814892 | None:intergenic |
| AGGATCAAATGAGTGCATAT+GGG | 0.599865 | 1:+98816367 | MsG0180006012.01.T01:CDS |
| AGAGGAAGAAAGGAACTCCA+TGG | 0.603418 | 1:+98815213 | MsG0180006012.01.T01:CDS |
| AGAATTCGGTGAAGAAAGAG+AGG | 0.605688 | 1:+98816199 | MsG0180006012.01.T01:CDS |
| TGTGCCTATTGATCAGAACT+GGG | 0.607519 | 1:+98816272 | MsG0180006012.01.T01:CDS |
| TTGAGTCGGCCACCGCGTCG+TGG | 0.614569 | 1:-98814895 | None:intergenic |
| CCACCGCCGCCACGACGCGG+TGG | 0.616473 | 1:+98814886 | MsG0180006012.01.T01:CDS |
| ATTGAACCACCACCAGGAGG+AGG | 0.621879 | 1:-98816297 | None:intergenic |
| TGCTAGTTGACAGAGTAACT+AGG | 0.622724 | 1:+98816498 | MsG0180006012.01.T01:three_prime_UTR |
| TCTGATGAATCGGCTGTGAG+TGG | 0.640798 | 1:+98815116 | MsG0180006012.01.T01:CDS |
| GGCCGACTCAACCAACTCAG+TGG | 0.643487 | 1:+98814907 | MsG0180006012.01.T01:CDS |
| TATTCATGACATTACATCGG+TGG | 0.643904 | 1:+98816233 | MsG0180006012.01.T01:CDS |
| GGAGGATTTACCGGACCGGT+GGG | 0.645323 | 1:+98814977 | MsG0180006012.01.T01:CDS |
| GACATGGCGGTGATAACGAG+AGG | 0.648245 | 1:+98815195 | MsG0180006012.01.T01:CDS |
| GATGAATCGGCTGTGAGTGG+TGG | 0.651355 | 1:+98815119 | MsG0180006012.01.T01:CDS |
| AGTTCCAGGTAAGTCTGCGA+CGG | 0.655266 | 1:+98815016 | MsG0180006012.01.T01:CDS |
| GGACCGGTGGGAGAAGATCG+CGG | 0.663194 | 1:+98814989 | MsG0180006012.01.T01:CDS |
| GACAAGAACACCAACTCAGG+TGG | 0.663453 | 1:+98816146 | MsG0180006012.01.T01:CDS |
| AAGTATTCATGACATTACAT+CGG | 0.675179 | 1:+98816230 | MsG0180006012.01.T01:CDS |
| GCCGATTCATCAGAATAACT+CGG | 0.681119 | 1:-98815107 | None:intergenic |
| GCACTATATACAAAATCACA+CGG | 0.691824 | 1:-98816430 | None:intergenic |
| TGCATTGAACCACCACCAGG+AGG | 0.701355 | 1:-98816300 | None:intergenic |
| CATGGACTGAAGAAGAACAC+AGG | 0.714829 | 1:+98815231 | MsG0180006012.01.T01:CDS |
| GGTTCGAAGCCGAGACATGG+CGG | 0.716484 | 1:+98815182 | MsG0180006012.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCAAAAAAAAAAAAAAAAA+CGG | + | Chr1:98815657-98815676 | MsG0180006012.01.T01:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTCT+GGG | + | Chr1:98815293-98815312 | MsG0180006012.01.T01:intron | 10.0% |
| !!! | TAGTTTTTTTTTTTTTTTTC+TGG | + | Chr1:98815292-98815311 | MsG0180006012.01.T01:intron | 10.0% |
| !!! | TTTAATTTTAATCTTTTTTG+GGG | + | Chr1:98815418-98815437 | MsG0180006012.01.T01:intron | 10.0% |
| !! | AAAAGTTATGTTAAAGATAA+AGG | - | Chr1:98815358-98815377 | None:intergenic | 15.0% |
| !! | ATAGTTACTTAAAACAAATA+GGG | + | Chr1:98816551-98816570 | MsG0180006012.01.T01:three_prime_UTR | 15.0% |
| !! | TATAGTTACTTAAAACAAAT+AGG | + | Chr1:98816550-98816569 | MsG0180006012.01.T01:three_prime_UTR | 15.0% |
| !!! | GTTGATAATTAAATTATTAG+TGG | + | Chr1:98816526-98816545 | MsG0180006012.01.T01:three_prime_UTR | 15.0% |
| !!! | TTAATTTTAATCTTTTTTGG+GGG | + | Chr1:98815419-98815438 | MsG0180006012.01.T01:intron | 15.0% |
| !!! | TTATCTTTAACATAACTTTT+TGG | + | Chr1:98815358-98815377 | MsG0180006012.01.T01:intron | 15.0% |
| !! | TACAAAATGTAGTTAAATAG+AGG | + | Chr1:98815986-98816005 | MsG0180006012.01.T01:intron | 20.0% |
| !!! | GTTTATTGGTTTTGATTTTA+GGG | + | Chr1:98815315-98815334 | MsG0180006012.01.T01:intron | 20.0% |
| !!! | TAATTTTAATCTTTTTTGGG+GGG | + | Chr1:98815420-98815439 | MsG0180006012.01.T01:intron | 20.0% |
| !!! | TTAACATAACTTTTTGGAAT+TGG | + | Chr1:98815364-98815383 | MsG0180006012.01.T01:intron | 20.0% |
| !!! | TTTTGTTAGTTGAATTCAAA+AGG | - | Chr1:98814824-98814843 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTGGGTTTAT+TGG | + | Chr1:98815301-98815320 | MsG0180006012.01.T01:intron | 20.0% |
| ! | AAACGACAAAATAGATGTAT+CGG | + | Chr1:98814841-98814860 | MsG0180006012.01.T01:exon | 25.0% |
| ! | AAGTATTCATGACATTACAT+CGG | + | Chr1:98816230-98816249 | MsG0180006012.01.T01:CDS | 25.0% |
| ! | ACTATAGCAATTTAACATAG+CGG | + | Chr1:98815848-98815867 | MsG0180006012.01.T01:intron | 25.0% |
| ! | AGAATTTGAACAAATCACTT+TGG | + | Chr1:98815943-98815962 | MsG0180006012.01.T01:intron | 25.0% |
| ! | ATGTTAAATTGCTATAGTGT+CGG | - | Chr1:98815846-98815865 | None:intergenic | 25.0% |
| ! | ATTCCCATTCCTTAAAATTA+TGG | - | Chr1:98815393-98815412 | None:intergenic | 25.0% |
| ! | TAAACAATGATGTCAAATAG+CGG | + | Chr1:98815691-98815710 | MsG0180006012.01.T01:intron | 25.0% |
| ! | TGATATACTGGAAATTGATT+CGG | + | Chr1:98815070-98815089 | MsG0180006012.01.T01:CDS | 25.0% |
| !! | AAAACAAATAGGGAACTTTT+AGG | + | Chr1:98816561-98816580 | MsG0180006012.01.T01:three_prime_UTR | 25.0% |
| !! | AATTGGATGCCATAATTTTA+AGG | + | Chr1:98815381-98815400 | MsG0180006012.01.T01:intron | 25.0% |
| !! | GCATTAGATTTTCATTTATC+TGG | + | Chr1:98816451-98816470 | MsG0180006012.01.T01:three_prime_UTR | 25.0% |
| !!! | ATGCCATAATTTTAAGGAAT+GGG | + | Chr1:98815387-98815406 | MsG0180006012.01.T01:intron | 25.0% |
| !!! | GGTTTATTGGTTTTGATTTT+AGG | + | Chr1:98815314-98815333 | MsG0180006012.01.T01:intron | 25.0% |
| !!! | GGTTTTATTTGTGAAGTTTA+TGG | + | Chr1:98816472-98816491 | MsG0180006012.01.T01:three_prime_UTR | 25.0% |
| AACGACAAAATAGATGTATC+GGG | + | Chr1:98814842-98814861 | MsG0180006012.01.T01:exon | 30.0% | |
| ACACTAGCAATTTAACATAG+AGG | + | Chr1:98816017-98816036 | MsG0180006012.01.T01:intron | 30.0% | |
| AGATAACATAAAATAGTGGC+GGG | - | Chr1:98816051-98816070 | None:intergenic | 30.0% | |
| CAGATAACATAAAATAGTGG+CGG | - | Chr1:98816052-98816071 | None:intergenic | 30.0% | |
| GCACAGATAACATAAAATAG+TGG | - | Chr1:98816055-98816074 | None:intergenic | 30.0% | |
| GCACTATATACAAAATCACA+CGG | - | Chr1:98816433-98816452 | None:intergenic | 30.0% | |
| GCATATGGGTATTCAAATTA+TGG | + | Chr1:98816381-98816400 | MsG0180006012.01.T01:CDS | 30.0% | |
| TACAAAATGTCCTTGAATAG+AGG | + | Chr1:98815815-98815834 | MsG0180006012.01.T01:intron | 30.0% | |
| TATTACCGATCAAAAGTGAT+AGG | - | Chr1:98815785-98815804 | None:intergenic | 30.0% | |
| TCTTCGAATCAAATTTCGTT+TGG | + | Chr1:98815161-98815180 | MsG0180006012.01.T01:CDS | 30.0% | |
| ! | CCTTGTTTAACATAAAACAG+CGG | - | Chr1:98815886-98815905 | None:intergenic | 30.0% |
| ! | CTATTTTATGTTATCTGTGC+AGG | + | Chr1:98816055-98816074 | MsG0180006012.01.T01:intron | 30.0% |
| ! | GATATACTGGAAATTGATTC+GGG | + | Chr1:98815071-98815090 | MsG0180006012.01.T01:CDS | 30.0% |
| !! | AGGTTCTAAAAAGTGTATTG+CGG | - | Chr1:98815765-98815784 | None:intergenic | 30.0% |
| !! | GATGCCATAATTTTAAGGAA+TGG | + | Chr1:98815386-98815405 | MsG0180006012.01.T01:intron | 30.0% |
| !! | TAGAACCTATCACTTTTGAT+CGG | + | Chr1:98815777-98815796 | MsG0180006012.01.T01:intron | 30.0% |
| !! | TGAATTACTGCTTTGCTATT+TGG | + | Chr1:98816625-98816644 | MsG0180006012.01.T01:three_prime_UTR | 30.0% |
| AGGATCAAATGAGTGCATAT+GGG | + | Chr1:98816367-98816386 | MsG0180006012.01.T01:CDS | 35.0% | |
| GAGCAAACCACAAAATTTGA+GGG | - | Chr1:98815635-98815654 | None:intergenic | 35.0% | |
| GTTTAACATAAAACAGCGGT+GGG | - | Chr1:98815882-98815901 | None:intergenic | 35.0% | |
| TATTCATGACATTACATCGG+TGG | + | Chr1:98816233-98816252 | MsG0180006012.01.T01:CDS | 35.0% | |
| TCCGAGTTATTCTGATGAAT+CGG | + | Chr1:98815106-98815125 | MsG0180006012.01.T01:CDS | 35.0% | |
| TGAGCAAACCACAAAATTTG+AGG | - | Chr1:98815636-98815655 | None:intergenic | 35.0% | |
| TGTTAAACAAGGATGTCAAG+TGG | + | Chr1:98815894-98815913 | MsG0180006012.01.T01:intron | 35.0% | |
| TGTTTAACATAAAACAGCGG+TGG | - | Chr1:98815883-98815902 | None:intergenic | 35.0% | |
| TTATTGGGCTGACCAAATTT+GGG | + | Chr1:98816085-98816104 | MsG0180006012.01.T01:CDS | 35.0% | |
| ! | AGCTTTGGTTCATGATATAC+TGG | + | Chr1:98815058-98815077 | MsG0180006012.01.T01:CDS | 35.0% |
| ! | GTCTAAACCCTCAAATTTTG+TGG | + | Chr1:98815625-98815644 | MsG0180006012.01.T01:intron | 35.0% |
| ! | GTTGAATTCAAAAGGTGTGA+TGG | - | Chr1:98814816-98814835 | None:intergenic | 35.0% |
| !! | CCGCTGTTTTATGTTAAACA+AGG | + | Chr1:98815883-98815902 | MsG0180006012.01.T01:intron | 35.0% |
| !!! | GAAGAAAGTACTTTTGAGCA+TGG | - | Chr1:98816176-98816195 | None:intergenic | 35.0% |
| CAGGATCAAATGAGTGCATA+TGG | + | Chr1:98816366-98816385 | MsG0180006012.01.T01:CDS | 40.0% | |
| CCAAATTTGGGAAAGGAGAT+TGG | + | Chr1:98816097-98816116 | MsG0180006012.01.T01:CDS | 40.0% | |
| CCAATCTCCTTTCCCAAATT+TGG | - | Chr1:98816100-98816119 | None:intergenic | 40.0% | |
| CTTATTGGGCTGACCAAATT+TGG | + | Chr1:98816084-98816103 | MsG0180006012.01.T01:CDS | 40.0% | |
| GTACTTTCTTCGCCAGAATT+CGG | + | Chr1:98816185-98816204 | MsG0180006012.01.T01:CDS | 40.0% | |
| TAAACAAGGATGTCAAGTGG+CGG | + | Chr1:98815897-98815916 | MsG0180006012.01.T01:intron | 40.0% | |
| TAAGTCTGCGACGGAAATTA+GGG | + | Chr1:98815025-98815044 | MsG0180006012.01.T01:CDS | 40.0% | |
| TAGGGATCACTATGAAGCTT+TGG | + | Chr1:98815043-98815062 | MsG0180006012.01.T01:CDS | 40.0% | |
| TCTCTTTCTTCACCGAATTC+TGG | - | Chr1:98816200-98816219 | None:intergenic | 40.0% | |
| TGATCCTGCAAATCGTTTGA+CGG | - | Chr1:98816354-98816373 | None:intergenic | 40.0% | |
| TGCTAGTTGACAGAGTAACT+AGG | + | Chr1:98816498-98816517 | MsG0180006012.01.T01:three_prime_UTR | 40.0% | |
| TGTGCCTATTGATCAGAACT+GGG | + | Chr1:98816272-98816291 | MsG0180006012.01.T01:CDS | 40.0% | |
| TTATCCGTCAAACGATTTGC+AGG | + | Chr1:98816347-98816366 | MsG0180006012.01.T01:CDS | 40.0% | |
| ! | AGAATTCGGTGAAGAAAGAG+AGG | + | Chr1:98816199-98816218 | MsG0180006012.01.T01:CDS | 40.0% |
| ! | GCCGATTCATCAGAATAACT+CGG | - | Chr1:98815110-98815129 | None:intergenic | 40.0% |
| !! | GAGATTGGAGAAGCATTTCA+AGG | + | Chr1:98816112-98816131 | MsG0180006012.01.T01:CDS | 40.0% |
| !! | TACTGGAAATTGATTCGGGT+CGG | + | Chr1:98815075-98815094 | MsG0180006012.01.T01:CDS | 40.0% |
| !! | TGTGCAGGCTGTTTCTTATT+GGG | + | Chr1:98816070-98816089 | MsG0180006012.01.T01:intron | 40.0% |
| !!! | AATCTTTTTTGGGGGGTTTC+TGG | + | Chr1:98815427-98815446 | MsG0180006012.01.T01:intron | 40.0% |
| !!! | ATCTTTTTTGGGGGGTTTCT+GGG | + | Chr1:98815428-98815447 | MsG0180006012.01.T01:intron | 40.0% |
| AGAGGAAGAAAGGAACTCCA+TGG | + | Chr1:98815213-98815232 | MsG0180006012.01.T01:CDS | 45.0% | |
| ATGTCAAATAGCGGTTGCAG+TGG | + | Chr1:98815700-98815719 | MsG0180006012.01.T01:intron | 45.0% | |
| CTGTGCCTATTGATCAGAAC+TGG | + | Chr1:98816271-98816290 | MsG0180006012.01.T01:CDS | 45.0% | |
| CTGTGTTCTTCTTCAGTCCA+TGG | - | Chr1:98815233-98815252 | None:intergenic | 45.0% | |
| GTAAGTCTGCGACGGAAATT+AGG | + | Chr1:98815024-98815043 | MsG0180006012.01.T01:CDS | 45.0% | |
| GTCGGTATAGCCTCTATTCA+AGG | - | Chr1:98815828-98815847 | None:intergenic | 45.0% | |
| TGTGACAAGAACACCAACTC+AGG | + | Chr1:98816143-98816162 | MsG0180006012.01.T01:CDS | 45.0% | |
| ! | CAGTTCTGATCAATAGGCAC+AGG | - | Chr1:98816273-98816292 | None:intergenic | 45.0% |
| ! | CATGGACTGAAGAAGAACAC+AGG | + | Chr1:98815231-98815250 | MsG0180006012.01.T01:CDS | 45.0% |
| ! | GGAACCCAGTTCTGATCAAT+AGG | - | Chr1:98816279-98816298 | None:intergenic | 45.0% |
| ! | GGTGATAACGAGAGGAAGAA+AGG | + | Chr1:98815203-98815222 | MsG0180006012.01.T01:CDS | 45.0% |
| !! | ACTGGAAATTGATTCGGGTC+GGG | + | Chr1:98815076-98815095 | MsG0180006012.01.T01:CDS | 45.0% |
| !! | CTGTGCAGGCTGTTTCTTAT+TGG | + | Chr1:98816069-98816088 | MsG0180006012.01.T01:intron | 45.0% |
| !!! | AATTTAATTTTAATCTTTTT+TGG | + | Chr1:98815416-98815435 | MsG0180006012.01.T01:intron | 5.0% |
| !!! | ATTTAATTTTAATCTTTTTT+GGG | + | Chr1:98815417-98815436 | MsG0180006012.01.T01:intron | 5.0% |
| AAGATCGCGGAACAAGTTCC+AGG | + | Chr1:98815002-98815021 | MsG0180006012.01.T01:CDS | 50.0% | |
| AGTTCCAGGTAAGTCTGCGA+CGG | + | Chr1:98815016-98815035 | MsG0180006012.01.T01:CDS | 50.0% | |
| ATTTCCGTCGCAGACTTACC+TGG | - | Chr1:98815023-98815042 | None:intergenic | 50.0% | |
| GACAAGAACACCAACTCAGG+TGG | + | Chr1:98816146-98816165 | MsG0180006012.01.T01:CDS | 50.0% | |
| GGGCTGACCAAATTTGGGAA+AGG | + | Chr1:98816090-98816109 | MsG0180006012.01.T01:CDS | 50.0% | |
| GTATCGGGAGTCAGTTGCTA+TGG | + | Chr1:98814857-98814876 | MsG0180006012.01.T01:CDS | 50.0% | |
| TCGTTATCACCGCCATGTCT+CGG | - | Chr1:98815194-98815213 | None:intergenic | 50.0% | |
| TCTGATGAATCGGCTGTGAG+TGG | + | Chr1:98815116-98815135 | MsG0180006012.01.T01:CDS | 50.0% | |
| TGTTGCATTGAACCACCACC+AGG | - | Chr1:98816306-98816325 | None:intergenic | 50.0% | |
| ! | TTTGGTTCGAAGCCGAGACA+TGG | + | Chr1:98815179-98815198 | MsG0180006012.01.T01:CDS | 50.0% |
| !! | AATTGATTCGGGTCGGGTTG+AGG | + | Chr1:98815082-98815101 | MsG0180006012.01.T01:CDS | 50.0% |
| !! | GTCCACTGAGTTGGTTGAGT+CGG | - | Chr1:98814912-98814931 | None:intergenic | 50.0% |
| !! | TGGTGGTGGATTGGCTGAAT+GGG | + | Chr1:98815136-98815155 | MsG0180006012.01.T01:CDS | 50.0% |
| ATTGAACCACCACCAGGAGG+AGG | - | Chr1:98816300-98816319 | None:intergenic | 55.0% | |
| CTCGCTCGAACAGCTTGTCA+TGG | - | Chr1:98814941-98814960 | None:intergenic | 55.0% | |
| GATGAATCGGCTGTGAGTGG+TGG | + | Chr1:98815119-98815138 | MsG0180006012.01.T01:CDS | 55.0% | |
| GTTCGAGCGAGCTCTGTTGA+TGG | + | Chr1:98814950-98814969 | MsG0180006012.01.T01:CDS | 55.0% | |
| TGCATTGAACCACCACCAGG+AGG | - | Chr1:98816303-98816322 | None:intergenic | 55.0% | |
| TGGTCTCGAGTCCACTGAGT+TGG | - | Chr1:98814921-98814940 | None:intergenic | 55.0% | |
| ! | GACATGGCGGTGATAACGAG+AGG | + | Chr1:98815195-98815214 | MsG0180006012.01.T01:CDS | 55.0% |
| ! | GATGGTGCCGGAGGATTTAC+CGG | + | Chr1:98814968-98814987 | MsG0180006012.01.T01:CDS | 55.0% |
| !! | GTGGTGGTGGATTGGCTGAA+TGG | + | Chr1:98815135-98815154 | MsG0180006012.01.T01:CDS | 55.0% |
| AACTGGGTTCCTCCTCCTGG+TGG | + | Chr1:98816288-98816307 | MsG0180006012.01.T01:CDS | 60.0% | |
| CACCGGTCCGGTAAATCCTC+CGG | - | Chr1:98814978-98814997 | None:intergenic | 60.0% | |
| CAGAACTGGGTTCCTCCTCC+TGG | + | Chr1:98816285-98816304 | MsG0180006012.01.T01:CDS | 60.0% | |
| GAATCGGCTGTGAGTGGTGG+TGG | + | Chr1:98815122-98815141 | MsG0180006012.01.T01:CDS | 60.0% | |
| GGAGGATTTACCGGACCGGT+GGG | + | Chr1:98814977-98814996 | MsG0180006012.01.T01:CDS | 60.0% | |
| GGTTCGAAGCCGAGACATGG+CGG | + | Chr1:98815182-98815201 | MsG0180006012.01.T01:CDS | 60.0% | |
| GTTCCGCGATCTTCTCCCAC+CGG | - | Chr1:98814995-98815014 | None:intergenic | 60.0% | |
| TGCCGGAGGATTTACCGGAC+CGG | + | Chr1:98814973-98814992 | MsG0180006012.01.T01:CDS | 60.0% | |
| ! | GCATGGCTAGCCACCTGAGT+TGG | - | Chr1:98816159-98816178 | None:intergenic | 60.0% |
| ! | GGCCGACTCAACCAACTCAG+TGG | + | Chr1:98814907-98814926 | MsG0180006012.01.T01:CDS | 60.0% |
| !! | AGCTCTGTTGATGGTGCCGG+AGG | + | Chr1:98814959-98814978 | MsG0180006012.01.T01:CDS | 60.0% |
| !! | GCGAGCTCTGTTGATGGTGC+CGG | + | Chr1:98814956-98814975 | MsG0180006012.01.T01:CDS | 60.0% |
| !! | GGCTGTGAGTGGTGGTGGAT+TGG | + | Chr1:98815127-98815146 | MsG0180006012.01.T01:CDS | 60.0% |
| CGGAGGATTTACCGGACCGG+TGG | + | Chr1:98814976-98814995 | MsG0180006012.01.T01:CDS | 65.0% | |
| GCGATCTTCTCCCACCGGTC+CGG | - | Chr1:98814990-98815009 | None:intergenic | 65.0% | |
| GGACCGGTGGGAGAAGATCG+CGG | + | Chr1:98814989-98815008 | MsG0180006012.01.T01:CDS | 65.0% | |
| TGGGTTCCTCCTCCTGGTGG+TGG | + | Chr1:98816291-98816310 | MsG0180006012.01.T01:CDS | 65.0% | |
| TTGAGTCGGCCACCGCGTCG+TGG | - | Chr1:98814898-98814917 | None:intergenic | 70.0% | |
| AGTCGGCCACCGCGTCGTGG+CGG | - | Chr1:98814895-98814914 | None:intergenic | 75.0% | |
| ! | CCACCACCGCCGCCACGACG+CGG | + | Chr1:98814883-98814902 | MsG0180006012.01.T01:CDS | 80.0% |
| ! | CCACCGCCGCCACGACGCGG+TGG | + | Chr1:98814886-98814905 | MsG0180006012.01.T01:CDS | 85.0% |
| ! | CCACCGCGTCGTGGCGGCGG+TGG | - | Chr1:98814889-98814908 | None:intergenic | 85.0% |
| ! | CCGCGTCGTGGCGGCGGTGG+TGG | - | Chr1:98814886-98814905 | None:intergenic | 85.0% |
| ! | CGGCCACCGCGTCGTGGCGG+CGG | - | Chr1:98814892-98814911 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 98814739 | 98816649 | 98814739 | ID=MsG0180006012.01;Name=MsG0180006012.01 |
| Chr1 | mRNA | 98814739 | 98816649 | 98814739 | ID=MsG0180006012.01.T01;Parent=MsG0180006012.01;Name=MsG0180006012.01.T01;_AED=0.35;_eAED=0.35;_QI=116|1|1|1|1|1|2|233|245 |
| Chr1 | exon | 98814739 | 98815252 | 98814739 | ID=MsG0180006012.01.T01:exon:50951;Parent=MsG0180006012.01.T01 |
| Chr1 | exon | 98816077 | 98816649 | 98816077 | ID=MsG0180006012.01.T01:exon:50952;Parent=MsG0180006012.01.T01 |
| Chr1 | five_prime_UTR | 98814739 | 98814854 | 98814739 | ID=MsG0180006012.01.T01:five_prime_utr;Parent=MsG0180006012.01.T01 |
| Chr1 | CDS | 98814855 | 98815252 | 98814855 | ID=MsG0180006012.01.T01:cds;Parent=MsG0180006012.01.T01 |
| Chr1 | CDS | 98816077 | 98816416 | 98816077 | ID=MsG0180006012.01.T01:cds;Parent=MsG0180006012.01.T01 |
| Chr1 | three_prime_UTR | 98816417 | 98816649 | 98816417 | ID=MsG0180006012.01.T01:three_prime_utr;Parent=MsG0180006012.01.T01 |
| Gene Sequence |
| Protein sequence |
