AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000601.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000601.01.T01 MTR_1g012530 90.062 161 13 1 75 235 302 459 2.37e-92 279
MsG0180000601.01.T01 MTR_1g012530 43.137 153 39 3 1 106 1 152 3.38e-24 100
MsG0180000601.01.T01 MTR_3g107050 52.941 170 64 3 75 231 285 451 1.80e-37 136
MsG0180000601.01.T01 MTR_1g012530 43.137 153 39 3 1 106 1 152 2.78e-24 99.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000601.01.T01 AT2G25480 47.664 107 42 5 75 175 256 354 1.33e-11 63.9
MsG0180000601.01.T01 AT2G25480 47.664 107 42 5 75 175 257 355 1.50e-11 63.5

Find 64 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGCAAACTGCAGGTTAT+TGG 0.278404 1:+8488453 MsG0180000601.01.T01:exon
AGGCTTGCAAATTTGCATTA+TGG 0.281106 1:+8488540 MsG0180000601.01.T01:three_prime_UTR
TTGCCTGCTGATGGACTTGA+TGG 0.301418 1:+8484178 MsG0180000601.01.T01:CDS
TTTCTCTTCCCCTGTAGCTT+TGG 0.320925 1:-8488251 None:intergenic
TGTTAAACAAATTATATTGT+TGG 0.341935 1:+8488794 MsG0180000601.01.T01:three_prime_UTR
TGCAAGGTCATTGTAGTTGA+TGG 0.351840 1:+8488696 MsG0180000601.01.T01:three_prime_UTR
TGCAACATTTGTCTGTTTAG+TGG 0.370135 1:+8488731 MsG0180000601.01.T01:three_prime_UTR
TGCAGGTGCAGCTGCTGAAT+TGG 0.371251 1:-8488197 None:intergenic
TCAGCAGGCAAAGGATTAAC+TGG 0.373496 1:-8484166 None:intergenic
GTTCGTCGTGAACACCGTTT+TGG 0.381078 1:-8484207 None:intergenic
TTCTTTGTTGACCTGGATGC+AGG 0.395862 1:-8488214 None:intergenic
AGCTGCTGAATTGGAAGAAT+TGG 0.396114 1:-8488188 None:intergenic
GTCTTCTTCCGACCAAGCTT+GGG 0.398482 1:-8487998 None:intergenic
CAGTTGGAAAGCACTGGAAC+TGG 0.409681 1:+8484333 MsG0180000601.01.T01:intron
GGAACAGTCAAGAGCACAAA+AGG 0.414883 1:+8484535 MsG0180000601.01.T01:CDS
ATTATATTGTTGGCTTGTAC+AGG 0.420045 1:+8488804 MsG0180000601.01.T01:three_prime_UTR
GTTAATCCTTTGCCTGCTGA+TGG 0.423284 1:+8484169 MsG0180000601.01.T01:CDS
TCGGATTAATTTGACAATGA+AGG 0.426363 1:+8488520 MsG0180000601.01.T01:three_prime_UTR
AGTCTTCTTCCGACCAAGCT+TGG 0.436954 1:-8487999 None:intergenic
GCAACATTTGTCTGTTTAGT+GGG 0.446998 1:+8488732 MsG0180000601.01.T01:three_prime_UTR
TTTGCATTCTTATTCTTGAC+AGG 0.449148 1:-8484560 None:intergenic
ACTAGCTTGTCCAAAGCTAC+AGG 0.460635 1:+8488241 MsG0180000601.01.T01:CDS
GACAAGGGTATCTCCTTTAG+TGG 0.463423 1:-8488110 None:intergenic
TGTGCTCTTGACTGTTCCGT+TGG 0.466042 1:-8484530 None:intergenic
CAATAATTTGATCGTTTCAA+AGG 0.466984 1:+8484403 MsG0180000601.01.T01:CDS
AGTATCTTTCTTTGTTGACC+TGG 0.468982 1:-8488221 None:intergenic
AATTCAGAGTCTGATGGAAA+TGG 0.469317 1:+8488028 MsG0180000601.01.T01:CDS
TTCACAAGACATTCTTCACT+TGG 0.478405 1:-8488364 None:intergenic
ATCAATCAGTTGGAAAGCAC+TGG 0.499209 1:+8484327 MsG0180000601.01.T01:intron
GATAAAGAAACAATGACGCT+TGG 0.508980 1:-8488587 None:intergenic
TCTTCACTTGGCTTATCTGA+AGG 0.516242 1:-8488352 None:intergenic
CAGAAGCAAGTCGAGTAGGA+AGG 0.516976 1:-8488159 None:intergenic
TCTGAAGGAACCGCATTATG+AGG 0.520062 1:-8488337 None:intergenic
CAGCAGCTGCACCTGCATCC+AGG 0.529437 1:+8488203 MsG0180000601.01.T01:CDS
AGAAGCAAGTCGAGTAGGAA+GGG 0.545934 1:-8488158 None:intergenic
TCACAAGGAAACTCCACTAA+AGG 0.546027 1:+8488097 MsG0180000601.01.T01:CDS
CAAAATCTCCCAAGCTTGGT+CGG 0.552099 1:+8487990 MsG0180000601.01.T01:CDS
AGAGCAAAATCTCCCAAGCT+TGG 0.555915 1:+8487986 MsG0180000601.01.T01:CDS
GCTCAATGCACAGTCATGAT+CGG 0.564147 1:-8488436 None:intergenic
TCAACAAATTCAGAGTCTGA+TGG 0.564610 1:+8488022 MsG0180000601.01.T01:CDS
CTAGCTTGTCCAAAGCTACA+GGG 0.570374 1:+8488242 MsG0180000601.01.T01:CDS
CTTGATGGTGTCCACCAAAA+CGG 0.575182 1:+8484193 MsG0180000601.01.T01:CDS
AATGTATGTAACTATTTGCA+AGG 0.577460 1:+8488680 MsG0180000601.01.T01:three_prime_UTR
CTTTCAGAAGCAAGTCGAGT+AGG 0.581698 1:-8488163 None:intergenic
CTACTCGACTTGCTTCTGAA+AGG 0.582535 1:+8488164 MsG0180000601.01.T01:CDS
ACACCATCAAGTCCATCAGC+AGG 0.591707 1:-8484181 None:intergenic
TCTTGTGACAACACGAGCTG+AGG 0.603555 1:-8488412 None:intergenic
AGTGAAGAATGTCTTGTGAA+TGG 0.604525 1:+8488367 MsG0180000601.01.T01:CDS
TCTTGTGAATGGTGACATAG+TGG 0.607830 1:+8488378 MsG0180000601.01.T01:CDS
TCAAGTCCATCAGCAGGCAA+AGG 0.607953 1:-8484175 None:intergenic
GAACAGTCAAGAGCACAAAA+GGG 0.609638 1:+8484536 MsG0180000601.01.T01:CDS
AGTGAAAATAAAAGTTCCAA+CGG 0.609860 1:+8484514 MsG0180000601.01.T01:CDS
AACATTTGTATCACTTGACA+AGG 0.624464 1:-8488308 None:intergenic
TGTCAAGAATAAGAATGCAA+AGG 0.627462 1:+8484562 MsG0180000601.01.T01:CDS
TGTTATAGAAGCTTATGACT+CGG 0.629585 1:+8488501 MsG0180000601.01.T01:three_prime_UTR
CTGTGCATTGAGCAAACTGC+AGG 0.634892 1:+8488446 MsG0180000601.01.T01:exon
GGTAGCTGCAGTTCTCGACA+AGG 0.636601 1:+8488049 MsG0180000601.01.T01:CDS
CTCGTCTATGAAGAAATCGA+AGG 0.646890 1:+8484359 MsG0180000601.01.T01:CDS
TAGCTTGTCCAAAGCTACAG+GGG 0.653664 1:+8488243 MsG0180000601.01.T01:CDS
GACGCTTGGACAAAGACAAG+AGG 0.655678 1:-8488573 None:intergenic
CTGAACGAGAAAGTGTCACA+AGG 0.655908 1:+8488082 MsG0180000601.01.T01:CDS
TGTTGCTCTACCTCATAATG+CGG 0.662005 1:+8488327 MsG0180000601.01.T01:CDS
GTAGGAAGGGACTTTCGTAG+TGG 0.671200 1:-8488145 None:intergenic
CGAAGGATCGAATGACAACG+TGG 0.698275 1:+8484376 MsG0180000601.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATAAGATTATGTAA+AGG - Chr1:8487786-8487805 None:intergenic 10.0%
!!! ATATAATAATTTTAGAATTC+AGG - Chr1:8487019-8487038 None:intergenic 10.0%
!!! ATTTTTATTTATACTAGAAA+AGG + Chr1:8487528-8487547 MsG0180000601.01.T01:intron 10.0%
!!! TTTTCTAGTATAAATAAAAA+TGG - Chr1:8487529-8487548 None:intergenic 10.0%
!! AAAAAAAAATAAGGTTTCAA+AGG - Chr1:8487195-8487214 None:intergenic 15.0%
!! AAAAACAAAATCATTGAAAA+AGG + Chr1:8485263-8485282 MsG0180000601.01.T01:intron 15.0%
!! TAGTAAAAATGATACTTATA+AGG + Chr1:8485192-8485211 MsG0180000601.01.T01:intron 15.0%
!! TGTTAAACAAATTATATTGT+TGG + Chr1:8488794-8488813 MsG0180000601.01.T01:three_prime_UTR 15.0%
!!! TAAACTATTTCTATAGTTAA+GGG + Chr1:8484991-8485010 MsG0180000601.01.T01:intron 15.0%
!!! TTAAACTATTTCTATAGTTA+AGG + Chr1:8484990-8485009 MsG0180000601.01.T01:intron 15.0%
!! ATACGGATATATGAAATAAA+AGG + Chr1:8486668-8486687 MsG0180000601.01.T01:intron 20.0%
!! CAACAAATAAGATTATGTAA+AGG - Chr1:8487683-8487702 None:intergenic 20.0%
!! CATTAGATAATCTGAAAATA+TGG + Chr1:8486723-8486742 MsG0180000601.01.T01:intron 20.0%
!! TCATATATCCGTATAAATAA+TGG - Chr1:8486662-8486681 None:intergenic 20.0%
!! TCTAAATCAGTTATATGATT+TGG + Chr1:8484458-8484477 MsG0180000601.01.T01:intron 20.0%
!! TGATAGTTTATGATAATCTA+AGG + Chr1:8484962-8484981 MsG0180000601.01.T01:intron 20.0%
!! TTATTTATACTAGAAAAGGT+TGG + Chr1:8487532-8487551 MsG0180000601.01.T01:intron 20.0%
!! TTGTAAGACCATTATTTATA+CGG + Chr1:8486651-8486670 MsG0180000601.01.T01:intron 20.0%
!!! AAAAAAAAAAGAGCATAATG+AGG - Chr1:8488641-8488660 None:intergenic 20.0%
!!! AATAATTTTAGAATTCAGGT+TGG - Chr1:8487015-8487034 None:intergenic 20.0%
!!! ACTATTTTAAAAGTAACTGA+GGG - Chr1:8484913-8484932 None:intergenic 20.0%
!!! AGATAATTTTCAAATCTGAA+TGG - Chr1:8487283-8487302 None:intergenic 20.0%
!!! ATAATTTTAGAATTCAGGTT+GGG - Chr1:8487014-8487033 None:intergenic 20.0%
!!! TAATATATTTGCTTTGTTCT+AGG + Chr1:8484484-8484503 MsG0180000601.01.T01:intron 20.0%
!!! TAATTATGATTTGGTTATTG+TGG + Chr1:8487215-8487234 MsG0180000601.01.T01:intron 20.0%
!!! TACTATTTTAAAAGTAACTG+AGG - Chr1:8484914-8484933 None:intergenic 20.0%
!!! TATTGTGGCTTTTAAAATTA+TGG + Chr1:8487230-8487249 MsG0180000601.01.T01:intron 20.0%
!!! TATTTTCAGATTATCTAATG+TGG - Chr1:8486723-8486742 None:intergenic 20.0%
!!! TTATCTAAAACAGAAAGAAA+AGG - Chr1:8484851-8484870 None:intergenic 20.0%
! AAAATAGAAGAAGACACAAA+AGG - Chr1:8484827-8484846 None:intergenic 25.0%
! AAAGCAAACAAAAAATCTTC+TGG - Chr1:8486088-8486107 None:intergenic 25.0%
! AAATAAACTCATAAGGAGAA+AGG - Chr1:8485332-8485351 None:intergenic 25.0%
! AATGTATGTAACTATTTGCA+AGG + Chr1:8488680-8488699 MsG0180000601.01.T01:three_prime_UTR 25.0%
! AGTGAAAATAAAAGTTCCAA+CGG + Chr1:8484514-8484533 MsG0180000601.01.T01:CDS 25.0%
! ATTGTGATTTCAATTTCAGT+TGG + Chr1:8487080-8487099 MsG0180000601.01.T01:intron 25.0%
! CAATAATTTGATCGTTTCAA+AGG + Chr1:8484403-8484422 MsG0180000601.01.T01:CDS 25.0%
! GAATTACTGACATGATTAAA+AGG - Chr1:8485773-8485792 None:intergenic 25.0%
! GAGGAATAAATAAACTCATA+AGG - Chr1:8485339-8485358 None:intergenic 25.0%
! TAGAACAAGTTTATAGTTCA+GGG + Chr1:8484932-8484951 MsG0180000601.01.T01:intron 25.0%
! TCAAGATATAACTACGTATA+TGG + Chr1:8487048-8487067 MsG0180000601.01.T01:intron 25.0%
! TCTGAAAATATGGTTATAAG+TGG + Chr1:8486733-8486752 MsG0180000601.01.T01:intron 25.0%
! TGCTTATTAAACACATCATT+GGG + Chr1:8487604-8487623 MsG0180000601.01.T01:intron 25.0%
! TTCTGTATTTACAGTAACAT+GGG - Chr1:8484277-8484296 None:intergenic 25.0%
! TTTCTGTATTTACAGTAACA+TGG - Chr1:8484278-8484297 None:intergenic 25.0%
!! AGTAATTCTCACACTTTTAT+AGG + Chr1:8485785-8485804 MsG0180000601.01.T01:intron 25.0%
!! ATATTTTCAGAATTTCCATC+TGG - Chr1:8484309-8484328 None:intergenic 25.0%
!! CAGATTTTCTTGTTAAGAAA+AGG - Chr1:8486263-8486282 None:intergenic 25.0%
!! CTTTTCTTAACAAGAAAATC+TGG + Chr1:8486261-8486280 MsG0180000601.01.T01:intron 25.0%
!! TTAGTGGGATATATATTTTG+AGG + Chr1:8488747-8488766 MsG0180000601.01.T01:three_prime_UTR 25.0%
!! TTCTGAAAATATCAATCAGT+TGG + Chr1:8484317-8484336 MsG0180000601.01.T01:intron 25.0%
!! TTTAGCTCATTATAGTGATT+TGG + Chr1:8486584-8486603 MsG0180000601.01.T01:intron 25.0%
!!! AAAAGTTTGGTCTTATCATT+TGG + Chr1:8487911-8487930 MsG0180000601.01.T01:intron 25.0%
!!! ATTGTTTTTTTCCTGTTATC+TGG + Chr1:8487752-8487771 MsG0180000601.01.T01:intron 25.0%
!!! TATGATGATGTGTATTTTTG+TGG + Chr1:8485412-8485431 MsG0180000601.01.T01:intron 25.0%
!!! TTGTTTTTTTCCTGTTATCT+GGG + Chr1:8487753-8487772 MsG0180000601.01.T01:intron 25.0%
!!! TTTTGATGCTGTTTTTTTCA+TGG - Chr1:8486290-8486309 None:intergenic 25.0%
AAACCTGGATAATGATACAA+AGG - Chr1:8485577-8485596 None:intergenic 30.0%
AACAGGAAAAACAATCAAGA+GGG - Chr1:8487646-8487665 None:intergenic 30.0%
AACATTGGGAAGAAAAACAA+AGG - Chr1:8484773-8484792 None:intergenic 30.0%
AACATTTGTATCACTTGACA+AGG - Chr1:8488311-8488330 None:intergenic 30.0%
AACTATCACTCTCTCTTATT+TGG - Chr1:8485018-8485037 None:intergenic 30.0%
AAGAAATATCATATCTGTGG+AGG + Chr1:8486628-8486647 MsG0180000601.01.T01:intron 30.0%
AAGCTTATTCAAATGAAACC+TGG - Chr1:8485592-8485611 None:intergenic 30.0%
ACAGCATTTGGTAAAAATGA+GGG - Chr1:8487835-8487854 None:intergenic 30.0%
ACAGGAAAAAAACAATCAAG+AGG - Chr1:8487748-8487767 None:intergenic 30.0%
AGAATAAGAATGCAAAGGTT+TGG + Chr1:8484567-8484586 MsG0180000601.01.T01:intron 30.0%
ATGAGTTCCTAAGTAAACAT+TGG - Chr1:8484788-8484807 None:intergenic 30.0%
ATTAAACACATCATTGGGAA+AGG + Chr1:8487609-8487628 MsG0180000601.01.T01:intron 30.0%
CAGGAAAAAAACAATCAAGA+GGG - Chr1:8487747-8487766 None:intergenic 30.0%
CTGCTTATTAAACACATCAT+TGG + Chr1:8487603-8487622 MsG0180000601.01.T01:intron 30.0%
GAAAATATGGTTATAAGTGG+TGG + Chr1:8486736-8486755 MsG0180000601.01.T01:intron 30.0%
GCTAAGAAATATCATATCTG+TGG + Chr1:8486625-8486644 MsG0180000601.01.T01:intron 30.0%
GTAACCCATTTAAAAACTTC+TGG - Chr1:8487888-8487907 None:intergenic 30.0%
GTAGAACAAGTTTATAGTTC+AGG + Chr1:8484931-8484950 MsG0180000601.01.T01:intron 30.0%
TAAACCATCTACTGATAAGA+GGG - Chr1:8487386-8487405 None:intergenic 30.0%
TAACAGGAAAAACAATCAAG+AGG - Chr1:8487647-8487666 None:intergenic 30.0%
TAACTCAACCCTAAGAAAAT+TGG - Chr1:8486780-8486799 None:intergenic 30.0%
TCCAGAAAATATGTTACAAG+TGG + Chr1:8486944-8486963 MsG0180000601.01.T01:intron 30.0%
TCTGTATTTACAGTAACATG+GGG - Chr1:8484276-8484295 None:intergenic 30.0%
TCTTATCAGTAGATGGTTTA+GGG + Chr1:8487386-8487405 MsG0180000601.01.T01:intron 30.0%
TCTTCTGCAATTTATATCTC+AGG - Chr1:8486539-8486558 None:intergenic 30.0%
TGAAACTTAACATGCTAAAC+AGG - Chr1:8486238-8486257 None:intergenic 30.0%
TGAGTTCCTAAGTAAACATT+GGG - Chr1:8484787-8484806 None:intergenic 30.0%
TGTCAAGAATAAGAATGCAA+AGG + Chr1:8484562-8484581 MsG0180000601.01.T01:CDS 30.0%
TGTTATAGAAGCTTATGACT+CGG + Chr1:8488501-8488520 MsG0180000601.01.T01:three_prime_UTR 30.0%
TTAAACACATCATTGGGAAA+GGG + Chr1:8487610-8487629 MsG0180000601.01.T01:intron 30.0%
TTCTCCTTGAACTTTATCAA+GGG - Chr1:8485291-8485310 None:intergenic 30.0%
TTTCTTCCCAATGTTTACTT+AGG + Chr1:8484778-8484797 MsG0180000601.01.T01:intron 30.0%
TTTGCATTCTTATTCTTGAC+AGG - Chr1:8484563-8484582 None:intergenic 30.0%
! AATTTAACTTCTGTATCCTC+TGG + Chr1:8487936-8487955 MsG0180000601.01.T01:intron 30.0%
! ACATGTGATCTATTGATTAC+AGG + Chr1:8485232-8485251 MsG0180000601.01.T01:intron 30.0%
! ACCACTTGTAACATATTTTC+TGG - Chr1:8486948-8486967 None:intergenic 30.0%
! AGCTTCCAGAAGTTTTTAAA+TGG + Chr1:8487880-8487899 MsG0180000601.01.T01:intron 30.0%
! CATGTGATCTATTGATTACA+GGG + Chr1:8485233-8485252 MsG0180000601.01.T01:intron 30.0%
! CTTACAAGCCAATTTTCTTA+GGG + Chr1:8486769-8486788 MsG0180000601.01.T01:intron 30.0%
! GCTTCCAGAAGTTTTTAAAT+GGG + Chr1:8487881-8487900 MsG0180000601.01.T01:intron 30.0%
! GTAATGTATGTTTTATGCGA+GGG + Chr1:8486118-8486137 MsG0180000601.01.T01:intron 30.0%
! TAAGATAAGAGTACACAACA+AGG - Chr1:8486041-8486060 None:intergenic 30.0%
! TAAGGTTTCAAAGGAGATTT+TGG - Chr1:8487186-8487205 None:intergenic 30.0%
! TCGGATTAATTTGACAATGA+AGG + Chr1:8488520-8488539 MsG0180000601.01.T01:three_prime_UTR 30.0%
! TGATTTTCCTTTTCTTGAGT+TGG + Chr1:8484431-8484450 MsG0180000601.01.T01:intron 30.0%
! TGTAATGTATGTTTTATGCG+AGG + Chr1:8486117-8486136 MsG0180000601.01.T01:intron 30.0%
! TTGAATGAGCGGTTTTTAAT+AGG - Chr1:8484709-8484728 None:intergenic 30.0%
!! AATGGAGTTGCTTTAAAGTT+AGG - Chr1:8485848-8485867 None:intergenic 30.0%
!! AATGGGTTACTGTAAAAGTT+TGG + Chr1:8487898-8487917 MsG0180000601.01.T01:intron 30.0%
!! ATTATATTGTTGGCTTGTAC+AGG + Chr1:8488804-8488823 MsG0180000601.01.T01:three_prime_UTR 30.0%
!! GATTGTTTTTCCTGTTATCT+GGG + Chr1:8487650-8487669 MsG0180000601.01.T01:intron 30.0%
!! TGATTGTTTTTCCTGTTATC+TGG + Chr1:8487649-8487668 MsG0180000601.01.T01:intron 30.0%
!! TTGGTACTTTTAGAGGATTA+AGG - Chr1:8485439-8485458 None:intergenic 30.0%
!!! TGTGGCTTTTAAAATTATGG+TGG + Chr1:8487233-8487252 MsG0180000601.01.T01:intron 30.0%
AAAACCGCTCATTCAATGAT+CGG + Chr1:8484713-8484732 MsG0180000601.01.T01:intron 35.0%
AAAGGTTGAGGAAAAGATTC+AGG + Chr1:8485661-8485680 MsG0180000601.01.T01:intron 35.0%
AAATGCTGTGTGAAAGTTCT+TGG + Chr1:8487846-8487865 MsG0180000601.01.T01:intron 35.0%
AAGAACTTTCACACAGCATT+TGG - Chr1:8487847-8487866 None:intergenic 35.0%
AATTCAGAGTCTGATGGAAA+TGG + Chr1:8488028-8488047 MsG0180000601.01.T01:CDS 35.0%
AGAGAAACCAACTCAAGAAA+AGG - Chr1:8484441-8484460 None:intergenic 35.0%
AGAGTCTATCCAATATCCAT+TGG + Chr1:8486828-8486847 MsG0180000601.01.T01:intron 35.0%
AGGCTTGCAAATTTGCATTA+TGG + Chr1:8488540-8488559 MsG0180000601.01.T01:three_prime_UTR 35.0%
AGTATCTTTCTTTGTTGACC+TGG - Chr1:8488224-8488243 None:intergenic 35.0%
AGTGAAGAATGTCTTGTGAA+TGG + Chr1:8488367-8488386 MsG0180000601.01.T01:CDS 35.0%
ATAAGAATGCAAAGGTTTGG+TGG + Chr1:8484570-8484589 MsG0180000601.01.T01:intron 35.0%
ATGCAAAATCAGTTGGAAGA+AGG - Chr1:8486361-8486380 None:intergenic 35.0%
CACAGCATTTGGTAAAAATG+AGG - Chr1:8487836-8487855 None:intergenic 35.0%
CAGCATTTGGTAAAAATGAG+GGG - Chr1:8487834-8487853 None:intergenic 35.0%
CATGCTAAACAGGCAATTAT+AGG - Chr1:8486228-8486247 None:intergenic 35.0%
CCAATTATGGATTCAGTTTC+AGG + Chr1:8485496-8485515 MsG0180000601.01.T01:intron 35.0%
CCTGAAACTGAATCCATAAT+TGG - Chr1:8485499-8485518 None:intergenic 35.0%
CTAAACCATCTACTGATAAG+AGG - Chr1:8487387-8487406 None:intergenic 35.0%
CTCTTATCAGTAGATGGTTT+AGG + Chr1:8487385-8487404 MsG0180000601.01.T01:intron 35.0%
CTGTATTTACAGTAACATGG+GGG - Chr1:8484275-8484294 None:intergenic 35.0%
CTTATCAGTAGATGGTTTAG+GGG + Chr1:8487387-8487406 MsG0180000601.01.T01:intron 35.0%
CTTCCTAAGCTTTCTAATCT+CGG - Chr1:8485823-8485842 None:intergenic 35.0%
CTTCTCCTTGAACTTTATCA+AGG - Chr1:8485292-8485311 None:intergenic 35.0%
GAGTCTATCCAATATCCATT+GGG + Chr1:8486829-8486848 MsG0180000601.01.T01:intron 35.0%
GATAAAGAAACAATGACGCT+TGG - Chr1:8488590-8488609 None:intergenic 35.0%
GATATCAACTATTCTCACCT+TGG - Chr1:8485723-8485742 None:intergenic 35.0%
GCAACATTTGTCTGTTTAGT+GGG + Chr1:8488732-8488751 MsG0180000601.01.T01:three_prime_UTR 35.0%
GGATTTGTCTCATCTAATGT+GGG - Chr1:8486927-8486946 None:intergenic 35.0%
TCAACAAATTCAGAGTCTGA+TGG + Chr1:8488022-8488041 MsG0180000601.01.T01:CDS 35.0%
TCTACATTAGTATTGTCCAG+AGG - Chr1:8487955-8487974 None:intergenic 35.0%
TCTCCTTGAACTTTATCAAG+GGG - Chr1:8485290-8485309 None:intergenic 35.0%
TGCAAAATCAGTTGGAAGAA+GGG - Chr1:8486360-8486379 None:intergenic 35.0%
TGCAACATTTGTCTGTTTAG+TGG + Chr1:8488731-8488750 MsG0180000601.01.T01:three_prime_UTR 35.0%
TGGATTTGTCTCATCTAATG+TGG - Chr1:8486928-8486947 None:intergenic 35.0%
TTATCAGTAGATGGTTTAGG+GGG + Chr1:8487388-8487407 MsG0180000601.01.T01:intron 35.0%
TTCACAAGACATTCTTCACT+TGG - Chr1:8488367-8488386 None:intergenic 35.0%
! ACTTTTATAGGAGAGTCAAG+AGG + Chr1:8485797-8485816 MsG0180000601.01.T01:intron 35.0%
! CCTTACAAGCCAATTTTCTT+AGG + Chr1:8486768-8486787 MsG0180000601.01.T01:intron 35.0%
! GCATAGTTCTACATTTGCAT+AGG - Chr1:8485361-8485380 None:intergenic 35.0%
! GGTAATGACAGGGTATTTAT+GGG - Chr1:8486435-8486454 None:intergenic 35.0%
! TAGTTCTACATTTGCATAGG+AGG - Chr1:8485358-8485377 None:intergenic 35.0%
! TGGTAATGACAGGGTATTTA+TGG - Chr1:8486436-8486455 None:intergenic 35.0%
!! ATCAAAGGTTTGGTAATGAC+AGG - Chr1:8486446-8486465 None:intergenic 35.0%
!! ATTTGCTTTGTTCTAGGACA+AGG + Chr1:8484490-8484509 MsG0180000601.01.T01:intron 35.0%
!! CCTAAGAAAATTGGCTTGTA+AGG - Chr1:8486771-8486790 None:intergenic 35.0%
!! GATGGGTTGTGAATAGTTTA+GGG - Chr1:8484882-8484901 None:intergenic 35.0%
!! TCAAAGGTTTGGTAATGACA+GGG - Chr1:8486445-8486464 None:intergenic 35.0%
!! TGATGGGTTGTGAATAGTTT+AGG - Chr1:8484883-8484902 None:intergenic 35.0%
!!! CAAGGTACTGTTTTCTTCAT+TGG - Chr1:8488293-8488312 None:intergenic 35.0%
!!! TTCAGTGTTGGTACTTTTAG+AGG - Chr1:8485446-8485465 None:intergenic 35.0%
AACAATCAGTGCAGACTCAA+GGG - Chr1:8486065-8486084 None:intergenic 40.0%
AACTGAGGGACTAACTTGAT+GGG - Chr1:8484899-8484918 None:intergenic 40.0%
ACACCACATCAAGAACTTTG+TGG - Chr1:8487424-8487443 None:intergenic 40.0%
ACAGAAACTGTTGTTCCAGA+TGG + Chr1:8484291-8484310 MsG0180000601.01.T01:intron 40.0%
AGCTGCTGAATTGGAAGAAT+TGG - Chr1:8488191-8488210 None:intergenic 40.0%
ATAGTCCTAACCTTACAAGC+TGG + Chr1:8486969-8486988 MsG0180000601.01.T01:intron 40.0%
ATATAACGCGCAGCAATCAA+AGG - Chr1:8486461-8486480 None:intergenic 40.0%
ATCCTCTCCAGAGAATTAGA+AGG - Chr1:8484232-8484251 None:intergenic 40.0%
CCACCTTTGTATCATTATCC+AGG + Chr1:8485571-8485590 MsG0180000601.01.T01:intron 40.0%
CCTGGATAATGATACAAAGG+TGG - Chr1:8485574-8485593 None:intergenic 40.0%
CTAACCCTCTTATCAGTAGA+TGG + Chr1:8487379-8487398 MsG0180000601.01.T01:intron 40.0%
CTCGTCTATGAAGAAATCGA+AGG + Chr1:8484359-8484378 MsG0180000601.01.T01:CDS 40.0%
GCAAAATCAGTTGGAAGAAG+GGG - Chr1:8486359-8486378 None:intergenic 40.0%
GCAGTGCAACAAACAAAACT+TGG - Chr1:8487587-8487606 None:intergenic 40.0%
GGTAACAACAGAGTTTACCT+TGG - Chr1:8484752-8484771 None:intergenic 40.0%
TAACTGAGGGACTAACTTGA+TGG - Chr1:8484900-8484919 None:intergenic 40.0%
TATCAGTAGATGGTTTAGGG+GGG + Chr1:8487389-8487408 MsG0180000601.01.T01:intron 40.0%
TCACAAGGAAACTCCACTAA+AGG + Chr1:8488097-8488116 MsG0180000601.01.T01:CDS 40.0%
TCAGCACATGCAAAATCAGT+TGG - Chr1:8486368-8486387 None:intergenic 40.0%
TCCATTGCCAACTTTCTATC+AGG + Chr1:8485862-8485881 MsG0180000601.01.T01:intron 40.0%
TCCTGATAGAAAGTTGGCAA+TGG - Chr1:8485866-8485885 None:intergenic 40.0%
TCTTCACTTGGCTTATCTGA+AGG - Chr1:8488355-8488374 None:intergenic 40.0%
TCTTGTGAATGGTGACATAG+TGG + Chr1:8488378-8488397 MsG0180000601.01.T01:CDS 40.0%
TGAGGAAAAGATTCAGGCAA+AGG + Chr1:8485667-8485686 MsG0180000601.01.T01:intron 40.0%
TGCAAGGTCATTGTAGTTGA+TGG + Chr1:8488696-8488715 MsG0180000601.01.T01:three_prime_UTR 40.0%
TGTTGCTCTACCTCATAATG+CGG + Chr1:8488327-8488346 MsG0180000601.01.T01:CDS 40.0%
TTGAGCAAACTGCAGGTTAT+TGG + Chr1:8488453-8488472 MsG0180000601.01.T01:exon 40.0%
TTGGTGAAAAACAGCGAAGT+TGG + Chr1:8484618-8484637 MsG0180000601.01.T01:intron 40.0%
TTTGGTAAAAATGAGGGGAG+CGG - Chr1:8487829-8487848 None:intergenic 40.0%
! AACCTTCTAATTCTCTGGAG+AGG + Chr1:8484227-8484246 MsG0180000601.01.T01:intron 40.0%
! ATCAATCAGTTGGAAAGCAC+TGG + Chr1:8484327-8484346 MsG0180000601.01.T01:intron 40.0%
! CGGTTTTTAATAGGCTGTCT+GGG - Chr1:8484700-8484719 None:intergenic 40.0%
! CTTTTCCTCAACCTTTAGTG+AGG - Chr1:8485657-8485676 None:intergenic 40.0%
! GAACAGTCAAGAGCACAAAA+GGG + Chr1:8484536-8484555 MsG0180000601.01.T01:CDS 40.0%
! GGAGATTTTGCTCTTGTAGT+TGG - Chr1:8487980-8487999 None:intergenic 40.0%
! TAGCTTGCAAGCAAAATCCA+AGG + Chr1:8485703-8485722 MsG0180000601.01.T01:intron 40.0%
! TATGGATTCAGTTTCAGGTG+CGG + Chr1:8485501-8485520 MsG0180000601.01.T01:intron 40.0%
! TGTTACCTCTCTCCTTTTCT+CGG - Chr1:8485534-8485553 None:intergenic 40.0%
! TTCGTAGTGGCTTCTTTTGA+TGG - Chr1:8488135-8488154 None:intergenic 40.0%
! TTCTAATTCTCTGGAGAGGA+TGG + Chr1:8484231-8484250 MsG0180000601.01.T01:intron 40.0%
!! GAAAATTGGCTTGTAAGGTG+AGG - Chr1:8486766-8486785 None:intergenic 40.0%
!! TGGCTTCTTTTGATGGACAA+GGG - Chr1:8488128-8488147 None:intergenic 40.0%
AAAGATTCAGGCAAAGGAGG+AGG + Chr1:8485673-8485692 MsG0180000601.01.T01:intron 45.0%
AAGTATACACACGCAGTCAG+AGG - Chr1:8485975-8485994 None:intergenic 45.0%
AGAAGCAAGTCGAGTAGGAA+GGG - Chr1:8488161-8488180 None:intergenic 45.0%
AGAAGGGGAAGTGGAAAACA+AGG - Chr1:8486344-8486363 None:intergenic 45.0%
AGAGCAAAATCTCCCAAGCT+TGG + Chr1:8487986-8488005 MsG0180000601.01.T01:CDS 45.0%
AGGATCAATGCCCAGATAAC+AGG - Chr1:8487663-8487682 None:intergenic 45.0%
AGGCCGAGATTAGAAAGCTT+AGG + Chr1:8485817-8485836 MsG0180000601.01.T01:intron 45.0%
AGGTTTGGCATCTTCAGTGT+TGG - Chr1:8485458-8485477 None:intergenic 45.0%
AGTGGGGACACTTCCAATTA+TGG + Chr1:8485483-8485502 MsG0180000601.01.T01:intron 45.0%
ATATCCAGTCCTTGGCACAA+GGG + Chr1:8486886-8486905 MsG0180000601.01.T01:intron 45.0%
CAAAATCTCCCAAGCTTGGT+CGG + Chr1:8487990-8488009 MsG0180000601.01.T01:CDS 45.0%
CAAACTTGCATTAACACCGC+TGG - Chr1:8484601-8484620 None:intergenic 45.0%
CAGTTCCTCACTAAAGGTTG+AGG + Chr1:8485649-8485668 MsG0180000601.01.T01:intron 45.0%
CGACCACAAAGTTCTTGATG+TGG + Chr1:8487418-8487437 MsG0180000601.01.T01:intron 45.0%
CGACGAACCTTCTAATTCTC+TGG + Chr1:8484222-8484241 MsG0180000601.01.T01:intron 45.0%
CTTTCAGAAGCAAGTCGAGT+AGG - Chr1:8488166-8488185 None:intergenic 45.0%
GAACAATCAGTGCAGACTCA+AGG - Chr1:8486066-8486085 None:intergenic 45.0%
GCAAACCAGCTTGTAAGGTT+AGG - Chr1:8486977-8486996 None:intergenic 45.0%
GCGAAGTTGGAAAAGACAAC+AGG + Chr1:8484631-8484650 MsG0180000601.01.T01:intron 45.0%
GCTCAATGCACAGTCATGAT+CGG - Chr1:8488439-8488458 None:intergenic 45.0%
GGAAAAGATTCAGGCAAAGG+AGG + Chr1:8485670-8485689 MsG0180000601.01.T01:intron 45.0%
GGACCCCTTGATAAAGTTCA+AGG + Chr1:8485284-8485303 MsG0180000601.01.T01:intron 45.0%
GTGACTTCTTGATTGCATGC+AGG + Chr1:8486015-8486034 MsG0180000601.01.T01:intron 45.0%
GTTAATCCTTTGCCTGCTGA+TGG + Chr1:8484169-8484188 MsG0180000601.01.T01:CDS 45.0%
TCAGCAGGCAAAGGATTAAC+TGG - Chr1:8484169-8484188 None:intergenic 45.0%
TCTGAAGGAACCGCATTATG+AGG - Chr1:8488340-8488359 None:intergenic 45.0%
TGCATTTGCTTGCTCAAGTG+TGG + Chr1:8486480-8486499 MsG0180000601.01.T01:intron 45.0%
TGCTGTGTGAAAGTTCTTGG+TGG + Chr1:8487849-8487868 MsG0180000601.01.T01:intron 45.0%
TGTGAGCAGTTCCTCACTAA+AGG + Chr1:8485643-8485662 MsG0180000601.01.T01:intron 45.0%
TTCTTTGTTGACCTGGATGC+AGG - Chr1:8488217-8488236 None:intergenic 45.0%
TTTCTCTTCCCCTGTAGCTT+TGG - Chr1:8488254-8488273 None:intergenic 45.0%
! ACTAGCTTGTCCAAAGCTAC+AGG + Chr1:8488241-8488260 MsG0180000601.01.T01:CDS 45.0%
! ATGGATTCAGTTTCAGGTGC+GGG + Chr1:8485502-8485521 MsG0180000601.01.T01:intron 45.0%
! CAGCGGTGTTAATGCAAGTT+TGG + Chr1:8484599-8484618 MsG0180000601.01.T01:intron 45.0%
! CTACTCGACTTGCTTCTGAA+AGG + Chr1:8488164-8488183 MsG0180000601.01.T01:CDS 45.0%
! CTAGCTTGTCCAAAGCTACA+GGG + Chr1:8488242-8488261 MsG0180000601.01.T01:CDS 45.0%
! GCGGTTTTTAATAGGCTGTC+TGG - Chr1:8484701-8484720 None:intergenic 45.0%
! GGAACAGTCAAGAGCACAAA+AGG + Chr1:8484535-8484554 MsG0180000601.01.T01:CDS 45.0%
! TAGCTTGTCCAAAGCTACAG+GGG + Chr1:8488243-8488262 MsG0180000601.01.T01:CDS 45.0%
! TGCTCTAGATATCCAGTCCT+TGG + Chr1:8486878-8486897 MsG0180000601.01.T01:intron 45.0%
!! ACCTTACAAGCTGGTTTGCA+AGG + Chr1:8486978-8486997 MsG0180000601.01.T01:intron 45.0%
!! AGAAGTGCCATTTGAGACAG+CGG - Chr1:8484663-8484682 None:intergenic 45.0%
!! CCTTACAAGCTGGTTTGCAA+GGG + Chr1:8486979-8486998 MsG0180000601.01.T01:intron 45.0%
!! CTGAACGAGAAAGTGTCACA+AGG + Chr1:8488082-8488101 MsG0180000601.01.T01:CDS 45.0%
!! CTTGATGGTGTCCACCAAAA+CGG + Chr1:8484193-8484212 MsG0180000601.01.T01:CDS 45.0%
!! GACAAGGGTATCTCCTTTAG+TGG - Chr1:8488113-8488132 None:intergenic 45.0%
!! GTGGCTTCTTTTGATGGACA+AGG - Chr1:8488129-8488148 None:intergenic 45.0%
!! TCATAATTAAAAAAAAAATA+AGG - Chr1:8487204-8487223 None:intergenic 5.0%
!!! TTTTTTTTTTAATTATGATT+TGG + Chr1:8487206-8487225 MsG0180000601.01.T01:intron 5.0%
ACACCATCAAGTCCATCAGC+AGG - Chr1:8484184-8484203 None:intergenic 50.0%
ACATCAGAAGACGCTGCTTC+AGG - Chr1:8485131-8485150 None:intergenic 50.0%
ACCTTCTTCAGCTCCACCTT+AGG - Chr1:8485899-8485918 None:intergenic 50.0%
ACGCGCAGCAATCAAAGGTT+TGG - Chr1:8486456-8486475 None:intergenic 50.0%
AGGGGAGACCCAATGGATAT+TGG - Chr1:8486840-8486859 None:intergenic 50.0%
AGTCTTCTTCCGACCAAGCT+TGG - Chr1:8488002-8488021 None:intergenic 50.0%
ATCCATTGGGTCTCCCCTAT+CGG + Chr1:8486842-8486861 MsG0180000601.01.T01:intron 50.0%
CAGAAGCAAGTCGAGTAGGA+AGG - Chr1:8488162-8488181 None:intergenic 50.0%
CCCTTGCAAACCAGCTTGTA+AGG - Chr1:8486982-8487001 None:intergenic 50.0%
CCTGCCGATCATTGAATGAG+CGG - Chr1:8484720-8484739 None:intergenic 50.0%
CGAAGGATCGAATGACAACG+TGG + Chr1:8484376-8484395 MsG0180000601.01.T01:CDS 50.0%
CGTGCTTGCACACGTATATC+TGG + Chr1:8485942-8485961 MsG0180000601.01.T01:intron 50.0%
CTGTGCATTGAGCAAACTGC+AGG + Chr1:8488446-8488465 MsG0180000601.01.T01:exon 50.0%
GACGCTTGGACAAAGACAAG+AGG - Chr1:8488576-8488595 None:intergenic 50.0%
GATATCCAGTCCTTGGCACA+AGG + Chr1:8486885-8486904 MsG0180000601.01.T01:intron 50.0%
GCAGGCTCCTGATAGAAAGT+TGG - Chr1:8485872-8485891 None:intergenic 50.0%
GCATCATCCGCTGTCTCAAA+TGG + Chr1:8484653-8484672 MsG0180000601.01.T01:intron 50.0%
GTCTTCTTCCGACCAAGCTT+GGG - Chr1:8488001-8488020 None:intergenic 50.0%
TCAAGTCCATCAGCAGGCAA+AGG - Chr1:8484178-8484197 None:intergenic 50.0%
TCAGTTGGAAGAAGGGGAAG+TGG - Chr1:8486353-8486372 None:intergenic 50.0%
TCCTAAGGTGGAGCTGAAGA+AGG + Chr1:8485895-8485914 MsG0180000601.01.T01:intron 50.0%
TCTTGTGACAACACGAGCTG+AGG - Chr1:8488415-8488434 None:intergenic 50.0%
TGTGCTCTTGACTGTTCCGT+TGG - Chr1:8484533-8484552 None:intergenic 50.0%
TTCTTCAGCTCCACCTTAGG+AGG - Chr1:8485896-8485915 None:intergenic 50.0%
! CAGGCAATTATAGGAGCACG+CGG - Chr1:8486219-8486238 None:intergenic 50.0%
! CTGGTTTGCAAGGGTTGAGT+AGG + Chr1:8486988-8487007 MsG0180000601.01.T01:intron 50.0%
! GTTCGTCGTGAACACCGTTT+TGG - Chr1:8484210-8484229 None:intergenic 50.0%
! TATCTAGAGCATGACCCGAG+TGG - Chr1:8486869-8486888 None:intergenic 50.0%
!! AGGTTTGGTGGTAGTTCCAG+CGG + Chr1:8484582-8484601 MsG0180000601.01.T01:intron 50.0%
!! CAGTTGGAAAGCACTGGAAC+TGG + Chr1:8484333-8484352 MsG0180000601.01.T01:intron 50.0%
!! TCAGGCTTTGAAGGTTGCTG+AGG - Chr1:8485113-8485132 None:intergenic 50.0%
!! TTGCCTGCTGATGGACTTGA+TGG + Chr1:8484178-8484197 MsG0180000601.01.T01:CDS 50.0%
AATGCACCTCCCTTGTGCCA+AGG - Chr1:8486898-8486917 None:intergenic 55.0%
ACGAGCCGAGAAAAGGAGAG+AGG + Chr1:8485526-8485545 MsG0180000601.01.T01:intron 55.0%
AGATGCCAAACCTCGCAGAG+TGG + Chr1:8485465-8485484 MsG0180000601.01.T01:intron 55.0%
ATGCCAAACCTCGCAGAGTG+GGG + Chr1:8485467-8485486 MsG0180000601.01.T01:intron 55.0%
CCGCTCATTCAATGATCGGC+AGG + Chr1:8484717-8484736 MsG0180000601.01.T01:intron 55.0%
GATGCCAAACCTCGCAGAGT+GGG + Chr1:8485466-8485485 MsG0180000601.01.T01:intron 55.0%
GGTAAAAATGAGGGGAGCGG+AGG - Chr1:8487826-8487845 None:intergenic 55.0%
GGTAGCTGCAGTTCTCGACA+AGG + Chr1:8488049-8488068 MsG0180000601.01.T01:CDS 55.0%
TCCATTGGGTCTCCCCTATC+GGG + Chr1:8486843-8486862 MsG0180000601.01.T01:intron 55.0%
TGCAAGCACGCACACACAGA+GGG - Chr1:8485932-8485951 None:intergenic 55.0%
TGCAGGTGCAGCTGCTGAAT+TGG - Chr1:8488200-8488219 None:intergenic 55.0%
! CGTCGTGAACACCGTTTTGG+TGG - Chr1:8484207-8484226 None:intergenic 55.0%
! GACGCTGCTTCAGGCTTTGA+AGG - Chr1:8485122-8485141 None:intergenic 55.0%
ACCTCCCTTGTGCCAAGGAC+TGG - Chr1:8486893-8486912 None:intergenic 60.0%
AGCTCCACCTTAGGAGGAGC+AGG - Chr1:8485890-8485909 None:intergenic 60.0%
ATGACCCGAGTGGCCCGATA+GGG - Chr1:8486859-8486878 None:intergenic 60.0%
GTGCAAGCACGCACACACAG+AGG - Chr1:8485933-8485952 None:intergenic 60.0%
TCAGGAGCCTGCTCCTCCTA+AGG + Chr1:8485880-8485899 MsG0180000601.01.T01:intron 60.0%
TCCAGTCCTTGGCACAAGGG+AGG + Chr1:8486889-8486908 MsG0180000601.01.T01:intron 60.0%
TCGGCAGGCTCAACTGTCCA+AGG + Chr1:8484732-8484751 MsG0180000601.01.T01:intron 60.0%
TGCGGGAACGAGCCGAGAAA+AGG + Chr1:8485519-8485538 MsG0180000601.01.T01:intron 60.0%
TGTCCCCACTCTGCGAGGTT+TGG - Chr1:8485473-8485492 None:intergenic 60.0%
CAGCAGCTGCACCTGCATCC+AGG + Chr1:8488203-8488222 MsG0180000601.01.T01:CDS 65.0%
CATGACCCGAGTGGCCCGAT+AGG - Chr1:8486860-8486879 None:intergenic 65.0%
GCCCGATAGGGGAGACCCAA+TGG - Chr1:8486847-8486866 None:intergenic 65.0%
GGAGCCTGCTCCTCCTAAGG+TGG + Chr1:8485883-8485902 MsG0180000601.01.T01:intron 65.0%
GTCTCCCCTATCGGGCCACT+CGG + Chr1:8486851-8486870 MsG0180000601.01.T01:intron 65.0%
TCTCCCCTATCGGGCCACTC+GGG + Chr1:8486852-8486871 MsG0180000601.01.T01:intron 65.0%
TGACCCGAGTGGCCCGATAG+GGG - Chr1:8486858-8486877 None:intergenic 65.0%
!! GGAAGTGTCCCCACTCTGCG+AGG - Chr1:8485478-8485497 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 8484157 8488841 8484157 ID=MsG0180000601.01;Name=MsG0180000601.01
Chr1 mRNA 8484157 8488841 8484157 ID=MsG0180000601.01.T01;Parent=MsG0180000601.01;Name=MsG0180000601.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.33|0.25|1|1|1|4|385|235
Chr1 exon 8487974 8488841 8487974 ID=MsG0180000601.01.T01:exon:2451;Parent=MsG0180000601.01.T01
Chr1 exon 8484506 8484583 8484506 ID=MsG0180000601.01.T01:exon:2450;Parent=MsG0180000601.01.T01
Chr1 exon 8484336 8484424 8484336 ID=MsG0180000601.01.T01:exon:2449;Parent=MsG0180000601.01.T01
Chr1 exon 8484157 8484214 8484157 ID=MsG0180000601.01.T01:exon:2448;Parent=MsG0180000601.01.T01
Chr1 CDS 8484157 8484214 8484157 ID=MsG0180000601.01.T01:cds;Parent=MsG0180000601.01.T01
Chr1 CDS 8484336 8484424 8484336 ID=MsG0180000601.01.T01:cds;Parent=MsG0180000601.01.T01
Chr1 CDS 8484506 8484583 8484506 ID=MsG0180000601.01.T01:cds;Parent=MsG0180000601.01.T01
Chr1 CDS 8487974 8488456 8487974 ID=MsG0180000601.01.T01:cds;Parent=MsG0180000601.01.T01
Chr1 three_prime_UTR 8488457 8488841 8488457 ID=MsG0180000601.01.T01:three_prime_utr;Parent=MsG0180000601.01.T01
Gene Sequence

>MsG0180000601.01.T01

ATGATGGATCCAGTTAATCCTTTGCCTGCTGATGGACTTGATGGTGTCCACCAAAACGTTGGAAAGCACTGGAACTGGAAACTCGTCTATGAAGAAATCGAAGGATCGAATGACAACGTGGATGACAATAATTTGATCGTTTCAAAGGACAAGGAAGTGAAAATAAAAGTTCCAACGGAACAGTCAAGAGCACAAAAGGGTCCTGTCAAGAATAAGAATGCAAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGGAAGAAGACTTCAACAAATTCAGAGTCTGATGGAAATGGTAGCTGCAGTTCTCGACAAGGTCGTTTAAGTCTGAACGAGAAAGTGTCACAAGGAAACTCCACTAAAGGAGATACCCTTGTCCATCAAAAGAAGCCACTACGAAAGTCCCTTCCTACTCGACTTGCTTCTGAAAGGACCAATTCTTCCAATTCAGCAGCTGCACCTGCATCCAGGTCAACAAAGAAAGATACTAGCTTGTCCAAAGCTACAGGGGAAGAGAAAACTGAGATTGTCGCAGCCAATGAAGAAAACAGTACCTTGTCAAGTGATACAAATGTTGCTCTACCTCATAATGCGGTTCCTTCAGATAAGCCAAGTGAAGAATGTCTTGTGAATGGTGACATAGTGGTTGAAGAGAATCCTCAGCTCGTGTTGTCACAAGAACCGATCATGACTGTGCATTGA
Protein sequence

>MsG0180000601.01.T01

MMDPVNPLPADGLDGVHQNVGKHWNWKLVYEEIEGSNDNVDDNNLIVSKDKEVKIKVPTEQSRAQKGPVKNKNAKIPTTRAKSPKLGRKKTSTNSESDGNGSCSSRQGRLSLNEKVSQGNSTKGDTLVHQKKPLRKSLPTRLASERTNSSNSAAAPASRSTKKDTSLSKATGEEKTEIVAANEENSTLSSDTNVALPHNAVPSDKPSEECLVNGDIVVEENPQLVLSQEPIMTVH*