Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045989.01.T01 | XP_003608528.1 | 97.549 | 204 | 3 | 1 | 1 | 204 | 303 | 504 | 3.15E-141 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045989.01.T01 | Q9SZF7 | 63.033 | 211 | 69 | 4 | 1 | 204 | 322 | 530 | 1.96E-83 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045989.01.T01 | G7JE24 | 97.549 | 204 | 3 | 1 | 1 | 204 | 303 | 504 | 1.50e-141 | 414 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0880045989.01 | 0.807661 | 4.533724e-50 | 2.539797e-47 |
| MsG0080048258.01 | MsG0880045989.01 | 0.857312 | 1.778219e-62 | 4.370254e-59 |
| MsG0080048781.01 | MsG0880045989.01 | 0.828919 | 6.877268e-55 | 6.931762e-52 |
| MsG0180000076.01 | MsG0880045989.01 | 0.807599 | 4.671514e-50 | 2.612742e-47 |
| MsG0180000601.01 | MsG0880045989.01 | 0.808720 | 2.695793e-50 | 1.552689e-47 |
| MsG0180001147.01 | MsG0880045989.01 | -0.816616 | 5.045252e-52 | 3.592396e-49 |
| MsG0180001293.01 | MsG0880045989.01 | 0.835186 | 1.943183e-56 | 2.358311e-53 |
| MsG0180001588.01 | MsG0880045989.01 | 0.806927 | 6.485616e-50 | 3.564690e-47 |
| MsG0180001719.01 | MsG0880045989.01 | 0.813028 | 3.148931e-51 | 2.033580e-48 |
| MsG0180002218.01 | MsG0880045989.01 | 0.812261 | 4.633189e-51 | 2.932017e-48 |
| MsG0180002397.01 | MsG0880045989.01 | 0.800988 | 1.113260e-48 | 5.256879e-46 |
| MsG0180002583.01 | MsG0880045989.01 | 0.802930 | 4.440908e-49 | 2.202766e-46 |
| MsG0880044688.01 | MsG0880045989.01 | 0.801892 | 7.264512e-49 | 3.509570e-46 |
| MsG0880044984.01 | MsG0880045989.01 | 0.849338 | 3.446867e-60 | 6.514018e-57 |
| MsG0880044989.01 | MsG0880045989.01 | 0.809984 | 1.444035e-50 | 8.601879e-48 |
| MsG0880045439.01 | MsG0880045989.01 | 0.812500 | 4.109717e-51 | 2.617358e-48 |
| MsG0880045584.01 | MsG0880045989.01 | 0.835127 | 2.010501e-56 | 2.435502e-53 |
| MsG0880045612.01 | MsG0880045989.01 | 0.833485 | 5.191636e-56 | 5.987180e-53 |
| MsG0880045647.01 | MsG0880045989.01 | 0.831098 | 2.024055e-55 | 2.174356e-52 |
| MsG0880045900.01 | MsG0880045989.01 | 0.801495 | 8.765753e-49 | 4.192286e-46 |
| MsG0880045989.01 | MsG0880046431.01 | 0.808216 | 3.454492e-50 | 1.963757e-47 |
| MsG0880045989.01 | MsG0880046904.01 | 0.803178 | 3.945521e-49 | 1.969546e-46 |
| MsG0880045989.01 | MsG0880046905.01 | 0.807796 | 4.242651e-50 | 2.385226e-47 |
| MsG0880045989.01 | MsG0880046993.01 | 0.833334 | 5.659916e-56 | 6.498497e-53 |
| MsG0880045989.01 | MsG0880047649.01 | 0.843408 | 1.426901e-58 | 2.230623e-55 |
| MsG0180003427.01 | MsG0880045989.01 | 0.810914 | 9.096309e-51 | 5.553544e-48 |
| MsG0180003796.01 | MsG0880045989.01 | 0.820637 | 6.173364e-53 | 4.911293e-50 |
| MsG0180003857.01 | MsG0880045989.01 | 0.825988 | 3.472067e-54 | 3.214832e-51 |
| MsG0180004120.01 | MsG0880045989.01 | 0.854874 | 9.205192e-62 | 2.085717e-58 |
| MsG0180004124.01 | MsG0880045989.01 | -0.810048 | 1.398841e-50 | 8.346474e-48 |
| MsG0180004125.01 | MsG0880045989.01 | -0.810373 | 1.190756e-50 | 7.165225e-48 |
| MsG0180004126.01 | MsG0880045989.01 | 0.832646 | 8.392301e-56 | 9.438950e-53 |
| MsG0180004185.01 | MsG0880045989.01 | 0.814524 | 1.474807e-51 | 9.919201e-49 |
| MsG0180004299.01 | MsG0880045989.01 | 0.824774 | 6.728526e-54 | 6.018376e-51 |
| MsG0180004510.01 | MsG0880045989.01 | 0.804321 | 2.284564e-49 | 1.174394e-46 |
| MsG0180004538.01 | MsG0880045989.01 | 0.814487 | 1.502272e-51 | 1.009400e-48 |
| MsG0180004559.01 | MsG0880045989.01 | 0.802963 | 4.370938e-49 | 2.169923e-46 |
| MsG0180004583.01 | MsG0880045989.01 | 0.834649 | 2.652632e-56 | 3.167781e-53 |
| MsG0180005002.01 | MsG0880045989.01 | 0.813330 | 2.703685e-51 | 1.760432e-48 |
| MsG0180005553.01 | MsG0880045989.01 | 0.811905 | 5.540987e-51 | 3.472413e-48 |
| MsG0180005655.01 | MsG0880045989.01 | 0.825516 | 4.491231e-54 | 4.102800e-51 |
| MsG0180005835.01 | MsG0880045989.01 | 0.811313 | 7.452943e-51 | 4.597962e-48 |
| MsG0180006062.01 | MsG0880045989.01 | 0.814830 | 1.261617e-51 | 8.555254e-49 |
| MsG0180006133.01 | MsG0880045989.01 | 0.832439 | 9.447714e-56 | 1.056025e-52 |
| MsG0180006182.01 | MsG0880045989.01 | 0.850221 | 1.953085e-60 | 3.798910e-57 |
| MsG0780040276.01 | MsG0880045989.01 | 0.806377 | 8.471456e-50 | 4.590926e-47 |
| MsG0780040364.01 | MsG0880045989.01 | 0.877088 | 8.319650e-69 | 4.130434e-65 |
| MsG0780040460.01 | MsG0880045989.01 | 0.854323 | 1.328647e-61 | 2.955866e-58 |
| MsG0780040620.01 | MsG0880045989.01 | 0.805228 | 1.477438e-49 | 7.774138e-47 |
| MsG0780040641.01 | MsG0880045989.01 | 0.828903 | 6.940666e-55 | 6.992148e-52 |
| MsG0780040899.01 | MsG0880045989.01 | 0.819748 | 9.866653e-53 | 7.658860e-50 |
| MsG0780041143.01 | MsG0880045989.01 | 0.800347 | 1.504193e-48 | 6.987884e-46 |
| MsG0780041271.01 | MsG0880045989.01 | 0.800757 | 1.241014e-48 | 5.825233e-46 |
| MsG0780041273.01 | MsG0880045989.01 | 0.803116 | 4.065126e-49 | 2.025922e-46 |
| MsG0880041837.01 | MsG0880045989.01 | 0.842903 | 1.945580e-58 | 2.993016e-55 |
| MsG0880042833.01 | MsG0880045989.01 | 0.807453 | 5.016671e-50 | 2.795411e-47 |
| MsG0880042906.01 | MsG0880045989.01 | 0.812844 | 3.455162e-51 | 2.220320e-48 |
| MsG0880042927.01 | MsG0880045989.01 | 0.826495 | 2.628733e-54 | 2.469205e-51 |
| MsG0880043684.01 | MsG0880045989.01 | 0.819837 | 9.414629e-53 | 7.326311e-50 |
| MsG0880043714.01 | MsG0880045989.01 | 0.828001 | 1.145992e-54 | 1.124686e-51 |
| MsG0280010617.01 | MsG0880045989.01 | 0.819440 | 1.160000e-52 | 8.927051e-50 |
| MsG0380012118.01 | MsG0880045989.01 | 0.815564 | 8.664316e-52 | 5.994436e-49 |
| MsG0380012472.01 | MsG0880045989.01 | 0.828464 | 8.861958e-55 | 8.815258e-52 |
| MsG0380012818.01 | MsG0880045989.01 | 0.816149 | 6.417901e-52 | 4.511872e-49 |
| MsG0380013041.01 | MsG0880045989.01 | 0.855781 | 5.009706e-62 | 1.169986e-58 |
| MsG0380014542.01 | MsG0880045989.01 | 0.819322 | 1.234006e-52 | 9.464774e-50 |
| MsG0380014544.01 | MsG0880045989.01 | 0.807575 | 4.726606e-50 | 2.641924e-47 |
| MsG0380014666.01 | MsG0880045989.01 | 0.809048 | 2.293387e-50 | 1.332565e-47 |
| MsG0680034415.01 | MsG0880045989.01 | 0.823342 | 1.458241e-53 | 1.252127e-50 |
| MsG0480018526.01 | MsG0880045989.01 | 0.829817 | 4.163523e-55 | 4.309391e-52 |
| MsG0480018767.01 | MsG0880045989.01 | 0.819538 | 1.101913e-52 | 8.503594e-50 |
| MsG0480019588.01 | MsG0880045989.01 | 0.806158 | 9.423857e-50 | 5.078748e-47 |
| MsG0480020366.01 | MsG0880045989.01 | 0.804971 | 1.672181e-49 | 8.741431e-47 |
| MsG0480020398.01 | MsG0880045989.01 | 0.817206 | 3.719546e-52 | 2.691519e-49 |
| MsG0480021175.01 | MsG0880045989.01 | 0.828912 | 6.905421e-55 | 6.958519e-52 |
| MsG0480021456.01 | MsG0880045989.01 | 0.829972 | 3.815354e-55 | 3.966090e-52 |
| MsG0480021773.01 | MsG0880045989.01 | 0.829726 | 4.381665e-55 | 4.522768e-52 |
| MsG0480021902.01 | MsG0880045989.01 | 0.825696 | 4.072509e-54 | 3.739456e-51 |
| MsG0480022320.01 | MsG0880045989.01 | 0.842445 | 2.575341e-58 | 3.906072e-55 |
| MsG0480022378.01 | MsG0880045989.01 | 0.817742 | 2.816422e-52 | 2.068302e-49 |
| MsG0480023324.01 | MsG0880045989.01 | 0.818394 | 2.005162e-52 | 1.499242e-49 |
| MsG0480023375.01 | MsG0880045989.01 | -0.802760 | 4.815403e-49 | 2.378286e-46 |
| MsG0480023426.01 | MsG0880045989.01 | 0.805755 | 1.145261e-49 | 6.109007e-47 |
| MsG0480023532.01 | MsG0880045989.01 | 0.844699 | 6.432689e-59 | 1.047037e-55 |
| MsG0480023626.01 | MsG0880045989.01 | 0.811363 | 7.266721e-51 | 4.489130e-48 |
| MsG0480023706.01 | MsG0880045989.01 | 0.823669 | 1.222895e-53 | 1.059948e-50 |
| MsG0480024002.01 | MsG0880045989.01 | 0.843787 | 1.130495e-58 | 1.788125e-55 |
| MsG0580024276.01 | MsG0880045989.01 | 0.806811 | 6.862761e-50 | 3.760811e-47 |
| MsG0580024388.01 | MsG0880045989.01 | 0.820184 | 7.841483e-53 | 6.161343e-50 |
| MsG0580024787.01 | MsG0880045989.01 | 0.821282 | 4.386630e-53 | 3.553205e-50 |
| MsG0580024954.01 | MsG0880045989.01 | 0.871340 | 7.364631e-67 | 2.960395e-63 |
| MsG0580025056.01 | MsG0880045989.01 | 0.825360 | 4.891515e-54 | 4.448457e-51 |
| MsG0580025385.01 | MsG0880045989.01 | 0.843036 | 1.793127e-58 | 2.769870e-55 |
| MsG0580025464.01 | MsG0880045989.01 | 0.875341 | 3.326046e-68 | 1.547114e-64 |
| MsG0580025504.01 | MsG0880045989.01 | 0.804764 | 1.846844e-49 | 9.603265e-47 |
| MsG0580025506.01 | MsG0880045989.01 | 0.810660 | 1.032337e-50 | 6.259831e-48 |
| MsG0580025775.01 | MsG0880045989.01 | 0.808059 | 3.730426e-50 | 2.111737e-47 |
| MsG0380015340.01 | MsG0880045989.01 | 0.819293 | 1.253223e-52 | 9.604395e-50 |
| MsG0380015394.01 | MsG0880045989.01 | 0.825388 | 4.817721e-54 | 4.384890e-51 |
| MsG0380015552.01 | MsG0880045989.01 | 0.832809 | 7.649190e-56 | 8.644322e-53 |
| MsG0380015656.01 | MsG0880045989.01 | 0.800471 | 1.419001e-48 | 6.612630e-46 |
| MsG0380015828.01 | MsG0880045989.01 | -0.807499 | 4.906296e-50 | 2.737163e-47 |
| MsG0380015954.01 | MsG0880045989.01 | 0.816184 | 6.302235e-52 | 4.434831e-49 |
| MsG0380016091.01 | MsG0880045989.01 | 0.812174 | 4.840498e-51 | 3.055887e-48 |
| MsG0380016143.01 | MsG0880045989.01 | 0.807562 | 4.757284e-50 | 2.658190e-47 |
| MsG0380016217.01 | MsG0880045989.01 | 0.804262 | 2.350816e-49 | 1.206570e-46 |
| MsG0380016225.01 | MsG0880045989.01 | 0.800806 | 1.212385e-48 | 5.698048e-46 |
| MsG0380016819.01 | MsG0880045989.01 | 0.808247 | 3.402228e-50 | 1.935662e-47 |
| MsG0380017181.01 | MsG0880045989.01 | 0.812571 | 3.964862e-51 | 2.529785e-48 |
| MsG0380017332.01 | MsG0880045989.01 | 0.812568 | 3.971066e-51 | 2.533536e-48 |
| MsG0380017588.01 | MsG0880045989.01 | 0.812840 | 3.462153e-51 | 2.224568e-48 |
| MsG0380017989.01 | MsG0880045989.01 | 0.803399 | 3.551357e-49 | 1.782906e-46 |
| MsG0480018106.01 | MsG0880045989.01 | 0.807884 | 4.065044e-50 | 2.290507e-47 |
| MsG0480018228.01 | MsG0880045989.01 | 0.843300 | 1.525151e-58 | 2.376083e-55 |
| MsG0580028330.01 | MsG0880045989.01 | 0.826077 | 3.306446e-54 | 3.069059e-51 |
| MsG0580028927.01 | MsG0880045989.01 | 0.867579 | 1.233703e-65 | 4.329048e-62 |
| MsG0580029591.01 | MsG0880045989.01 | 0.842533 | 2.439992e-58 | 3.710720e-55 |
| MsG0580030179.01 | MsG0880045989.01 | 0.836354 | 9.831581e-57 | 1.235972e-53 |
| MsG0680030628.01 | MsG0880045989.01 | 0.811658 | 6.269638e-51 | 3.903344e-48 |
| MsG0280006563.01 | MsG0880045989.01 | 0.808745 | 2.662859e-50 | 1.534798e-47 |
| MsG0280006884.01 | MsG0880045989.01 | 0.802336 | 5.887239e-49 | 2.876487e-46 |
| MsG0280007688.01 | MsG0880045989.01 | 0.821117 | 4.788110e-53 | 3.860885e-50 |
| MsG0280008407.01 | MsG0880045989.01 | 0.823859 | 1.103918e-53 | 9.619494e-51 |
| MsG0280009866.01 | MsG0880045989.01 | 0.810110 | 1.356346e-50 | 8.106180e-48 |
| MsG0680035776.01 | MsG0880045989.01 | 0.802256 | 6.115076e-49 | 2.981638e-46 |
| MsG0780036553.01 | MsG0880045989.01 | 0.810858 | 9.353450e-51 | 5.701922e-48 |
| MsG0780038393.01 | MsG0880045989.01 | 0.826950 | 2.047068e-54 | 1.948322e-51 |
| MsG0780038736.01 | MsG0880045989.01 | 0.817289 | 3.562752e-52 | 2.583924e-49 |
| MsG0780038810.01 | MsG0880045989.01 | 0.823095 | 1.665970e-53 | 1.420686e-50 |
| MsG0780039303.01 | MsG0880045989.01 | 0.850405 | 1.735030e-60 | 3.395019e-57 |
| MsG0780039536.01 | MsG0880045989.01 | 0.821694 | 3.523237e-53 | 2.887149e-50 |
| MsG0780039578.01 | MsG0880045989.01 | 0.845574 | 3.730477e-59 | 6.243906e-56 |
| MsG0780039861.01 | MsG0880045989.01 | 0.849381 | 3.354887e-60 | 6.348415e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045989.01.T01 | MTR_4g097080 | 97.549 | 204 | 3 | 1 | 1 | 204 | 303 | 504 | 3.81e-145 | 414 |
| MsG0880045989.01.T01 | MTR_5g015490 | 69.484 | 213 | 53 | 4 | 1 | 204 | 282 | 491 | 7.42e-98 | 293 |
| MsG0880045989.01.T01 | MTR_2g099110 | 43.318 | 217 | 104 | 7 | 1 | 204 | 242 | 452 | 1.50e-48 | 164 |
| MsG0880045989.01.T01 | MTR_5g094450 | 30.622 | 209 | 130 | 5 | 2 | 203 | 332 | 532 | 5.49e-29 | 113 |
| MsG0880045989.01.T01 | MTR_1g029420 | 28.846 | 208 | 136 | 4 | 1 | 203 | 392 | 592 | 9.78e-29 | 112 |
| MsG0880045989.01.T01 | MTR_2g082090 | 32.367 | 207 | 128 | 4 | 2 | 203 | 380 | 579 | 1.35e-28 | 112 |
| MsG0880045989.01.T01 | MTR_2g026250 | 32.039 | 206 | 128 | 4 | 3 | 203 | 398 | 596 | 1.44e-28 | 112 |
| MsG0880045989.01.T01 | MTR_3g056110 | 28.641 | 206 | 135 | 4 | 3 | 203 | 344 | 542 | 5.89e-28 | 110 |
| MsG0880045989.01.T01 | MTR_7g027190 | 32.843 | 204 | 124 | 6 | 3 | 203 | 480 | 673 | 1.55e-27 | 109 |
| MsG0880045989.01.T01 | MTR_5g097480 | 28.155 | 206 | 136 | 4 | 3 | 203 | 346 | 544 | 3.27e-26 | 105 |
| MsG0880045989.01.T01 | MTR_3g089055 | 27.404 | 208 | 139 | 4 | 1 | 203 | 365 | 565 | 8.06e-26 | 104 |
| MsG0880045989.01.T01 | MTR_3g089055 | 27.404 | 208 | 139 | 4 | 1 | 203 | 370 | 570 | 8.32e-26 | 104 |
| MsG0880045989.01.T01 | MTR_2g089100 | 29.798 | 198 | 127 | 4 | 12 | 204 | 254 | 444 | 3.52e-24 | 99.4 |
| MsG0880045989.01.T01 | MTR_4g133660 | 28.155 | 206 | 136 | 4 | 2 | 202 | 344 | 542 | 4.80e-24 | 99.4 |
| MsG0880045989.01.T01 | MTR_4g102790 | 27.315 | 216 | 135 | 6 | 1 | 204 | 458 | 663 | 1.15e-21 | 92.4 |
| MsG0880045989.01.T01 | MTR_5g015950 | 28.141 | 199 | 117 | 3 | 25 | 204 | 256 | 447 | 5.58e-21 | 90.1 |
| MsG0880045989.01.T01 | MTR_3g053270 | 28.141 | 199 | 117 | 3 | 25 | 204 | 256 | 447 | 5.58e-21 | 90.1 |
| MsG0880045989.01.T01 | MTR_7g057230 | 28.155 | 206 | 136 | 4 | 1 | 202 | 459 | 656 | 2.11e-20 | 89.0 |
| MsG0880045989.01.T01 | MTR_4g095500 | 26.601 | 203 | 116 | 4 | 28 | 204 | 274 | 469 | 1.10e-19 | 86.7 |
| MsG0880045989.01.T01 | MTR_8g442410 | 27.885 | 208 | 136 | 8 | 1 | 203 | 327 | 525 | 2.14e-19 | 85.9 |
| MsG0880045989.01.T01 | MTR_8g020840 | 30.000 | 200 | 124 | 7 | 8 | 203 | 361 | 548 | 4.47e-19 | 85.1 |
| MsG0880045989.01.T01 | MTR_4g104020 | 25.962 | 208 | 139 | 5 | 1 | 203 | 323 | 520 | 1.16e-18 | 83.6 |
| MsG0880045989.01.T01 | MTR_3g065980 | 25.346 | 217 | 143 | 4 | 1 | 203 | 329 | 540 | 1.35e-18 | 83.6 |
| MsG0880045989.01.T01 | MTR_4g077760 | 28.780 | 205 | 136 | 5 | 1 | 203 | 359 | 555 | 3.61e-18 | 82.4 |
| MsG0880045989.01.T01 | MTR_4g064160 | 27.273 | 209 | 139 | 6 | 2 | 204 | 484 | 685 | 1.65e-17 | 80.5 |
| MsG0880045989.01.T01 | MTR_2g097350 | 25.714 | 210 | 143 | 6 | 2 | 204 | 438 | 641 | 8.86e-17 | 78.6 |
| MsG0880045989.01.T01 | MTR_3g022830 | 28.395 | 162 | 108 | 4 | 43 | 203 | 282 | 436 | 2.32e-16 | 77.0 |
| MsG0880045989.01.T01 | MTR_2g097410 | 29.524 | 210 | 134 | 7 | 2 | 204 | 540 | 742 | 7.85e-16 | 75.5 |
| MsG0880045989.01.T01 | MTR_4g064180 | 30.108 | 186 | 116 | 6 | 21 | 200 | 445 | 622 | 9.12e-16 | 75.5 |
| MsG0880045989.01.T01 | MTR_4g064200 | 26.667 | 210 | 140 | 7 | 2 | 204 | 449 | 651 | 1.40e-15 | 74.7 |
| MsG0880045989.01.T01 | MTR_4g064120 | 28.293 | 205 | 132 | 7 | 3 | 200 | 426 | 622 | 3.33e-15 | 73.9 |
| MsG0880045989.01.T01 | MTR_2g097467 | 24.402 | 209 | 143 | 5 | 3 | 204 | 455 | 655 | 3.40e-15 | 73.9 |
| MsG0880045989.01.T01 | MTR_2g097310 | 25.238 | 210 | 142 | 6 | 3 | 204 | 437 | 639 | 4.90e-15 | 73.2 |
| MsG0880045989.01.T01 | MTR_2g097463 | 26.087 | 207 | 142 | 5 | 3 | 204 | 456 | 656 | 6.96e-15 | 72.8 |
| MsG0880045989.01.T01 | MTR_6g047750 | 25.229 | 218 | 130 | 7 | 3 | 203 | 461 | 662 | 6.97e-15 | 72.8 |
| MsG0880045989.01.T01 | MTR_4g064150 | 26.794 | 209 | 139 | 7 | 3 | 204 | 533 | 734 | 3.06e-14 | 70.9 |
| MsG0880045989.01.T01 | MTR_7g062120 | 24.155 | 207 | 146 | 4 | 3 | 204 | 541 | 741 | 4.01e-14 | 70.9 |
| MsG0880045989.01.T01 | MTR_5g009080 | 29.677 | 155 | 100 | 4 | 51 | 203 | 331 | 478 | 1.49e-13 | 68.9 |
| MsG0880045989.01.T01 | MTR_2g097390 | 23.810 | 210 | 145 | 6 | 3 | 204 | 440 | 642 | 1.20e-12 | 66.2 |
| MsG0880045989.01.T01 | MTR_4g076140 | 26.115 | 157 | 107 | 4 | 49 | 203 | 320 | 469 | 2.59e-11 | 62.4 |
| MsG0880045989.01.T01 | MTR_4g076020 | 25.714 | 210 | 136 | 10 | 1 | 204 | 235 | 430 | 2.73e-11 | 62.4 |
| MsG0880045989.01.T01 | MTR_2g034260 | 23.902 | 205 | 148 | 4 | 1 | 203 | 386 | 584 | 5.23e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045989.01.T01 | AT4G37650 | 63.033 | 211 | 69 | 4 | 1 | 204 | 322 | 530 | 2.00e-84 | 259 |
| MsG0880045989.01.T01 | AT2G04890 | 30.097 | 206 | 132 | 4 | 3 | 203 | 215 | 413 | 3.24e-31 | 117 |
| MsG0880045989.01.T01 | AT1G50600 | 31.401 | 207 | 130 | 4 | 2 | 203 | 327 | 526 | 5.90e-31 | 118 |
| MsG0880045989.01.T01 | AT1G50600 | 31.401 | 207 | 130 | 4 | 2 | 203 | 398 | 597 | 7.48e-31 | 118 |
| MsG0880045989.01.T01 | AT1G50600 | 31.401 | 207 | 130 | 4 | 2 | 203 | 402 | 601 | 8.21e-31 | 118 |
| MsG0880045989.01.T01 | AT1G21450 | 30.660 | 212 | 126 | 5 | 2 | 203 | 393 | 593 | 3.84e-27 | 108 |
| MsG0880045989.01.T01 | AT1G66350 | 31.884 | 207 | 127 | 6 | 1 | 203 | 310 | 506 | 1.58e-26 | 106 |
| MsG0880045989.01.T01 | AT5G48150 | 27.053 | 207 | 139 | 4 | 2 | 203 | 291 | 490 | 7.34e-26 | 103 |
| MsG0880045989.01.T01 | AT5G48150 | 27.053 | 207 | 139 | 4 | 2 | 203 | 291 | 490 | 7.34e-26 | 103 |
| MsG0880045989.01.T01 | AT5G48150 | 27.053 | 207 | 139 | 4 | 2 | 203 | 291 | 490 | 7.34e-26 | 103 |
| MsG0880045989.01.T01 | AT5G48150 | 27.053 | 207 | 139 | 4 | 2 | 203 | 291 | 490 | 7.34e-26 | 103 |
| MsG0880045989.01.T01 | AT3G03450 | 28.708 | 209 | 134 | 4 | 1 | 203 | 346 | 545 | 1.02e-25 | 103 |
| MsG0880045989.01.T01 | AT5G17490 | 28.708 | 209 | 134 | 4 | 1 | 203 | 317 | 516 | 9.97e-24 | 98.2 |
| MsG0880045989.01.T01 | AT4G17230 | 27.404 | 208 | 139 | 4 | 2 | 204 | 326 | 526 | 3.66e-23 | 96.7 |
| MsG0880045989.01.T01 | AT4G17230 | 27.404 | 208 | 139 | 4 | 2 | 204 | 326 | 526 | 3.66e-23 | 96.7 |
| MsG0880045989.01.T01 | AT5G52510 | 26.442 | 208 | 141 | 4 | 1 | 203 | 440 | 640 | 1.10e-21 | 92.8 |
| MsG0880045989.01.T01 | AT3G49950 | 32.065 | 184 | 111 | 4 | 27 | 204 | 234 | 409 | 2.66e-21 | 90.9 |
| MsG0880045989.01.T01 | AT1G14920 | 26.961 | 204 | 139 | 5 | 3 | 203 | 333 | 529 | 1.99e-19 | 85.9 |
| MsG0880045989.01.T01 | AT2G29060 | 27.404 | 208 | 139 | 5 | 3 | 204 | 455 | 656 | 2.43e-18 | 82.8 |
| MsG0880045989.01.T01 | AT2G29065 | 27.830 | 212 | 137 | 7 | 2 | 204 | 425 | 629 | 2.59e-18 | 82.8 |
| MsG0880045989.01.T01 | AT2G29060 | 27.404 | 208 | 139 | 5 | 3 | 204 | 492 | 693 | 3.04e-18 | 82.8 |
| MsG0880045989.01.T01 | AT2G01570 | 25.490 | 204 | 142 | 5 | 3 | 203 | 385 | 581 | 5.15e-18 | 82.0 |
| MsG0880045989.01.T01 | AT1G07530 | 27.404 | 208 | 138 | 6 | 3 | 204 | 566 | 766 | 2.25e-17 | 80.1 |
| MsG0880045989.01.T01 | AT2G37650 | 28.365 | 208 | 138 | 5 | 2 | 204 | 501 | 702 | 6.81e-17 | 79.0 |
| MsG0880045989.01.T01 | AT2G37650 | 28.365 | 208 | 138 | 5 | 2 | 204 | 513 | 714 | 7.74e-17 | 78.6 |
| MsG0880045989.01.T01 | AT5G66770 | 29.557 | 203 | 134 | 6 | 5 | 203 | 387 | 584 | 3.25e-16 | 76.6 |
| MsG0880045989.01.T01 | AT1G63100 | 27.778 | 216 | 138 | 6 | 1 | 202 | 417 | 628 | 4.77e-16 | 76.3 |
| MsG0880045989.01.T01 | AT1G63100 | 27.778 | 216 | 138 | 6 | 1 | 202 | 442 | 653 | 5.36e-16 | 76.3 |
| MsG0880045989.01.T01 | AT3G50650 | 28.502 | 207 | 135 | 6 | 5 | 203 | 341 | 542 | 6.11e-16 | 75.9 |
| MsG0880045989.01.T01 | AT1G55580 | 28.022 | 182 | 120 | 5 | 26 | 203 | 271 | 445 | 9.37e-16 | 75.1 |
| MsG0880045989.01.T01 | AT3G54220 | 25.481 | 208 | 138 | 8 | 1 | 204 | 457 | 651 | 1.02e-15 | 75.5 |
| MsG0880045989.01.T01 | AT1G50420 | 28.395 | 162 | 97 | 5 | 49 | 203 | 330 | 479 | 2.67e-14 | 71.2 |
| MsG0880045989.01.T01 | AT3G46600 | 23.923 | 209 | 146 | 5 | 2 | 204 | 171 | 372 | 5.64e-14 | 70.1 |
| MsG0880045989.01.T01 | AT3G46600 | 24.762 | 210 | 143 | 6 | 2 | 204 | 379 | 580 | 1.10e-13 | 69.3 |
| MsG0880045989.01.T01 | AT3G46600 | 24.762 | 210 | 143 | 6 | 2 | 204 | 347 | 548 | 1.10e-13 | 69.3 |
| MsG0880045989.01.T01 | AT3G13840 | 26.368 | 201 | 132 | 7 | 5 | 203 | 324 | 510 | 8.53e-12 | 63.9 |
Find 54 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAATCACGGTGGTTTC+CGG | 0.257711 | 8:-67340283 | None:intergenic |
| AAGAGTGTTTAAGATGGTTT+AGG | 0.258495 | 8:+67340406 | MsG0880045989.01.T01:CDS |
| AGGAGGAGGTTGCATGGTGG+TGG | 0.328666 | 8:+67340576 | MsG0880045989.01.T01:CDS |
| ATGAAGTTTGTGATGATGTT+AGG | 0.345281 | 8:+67340622 | MsG0880045989.01.T01:CDS |
| GCTGATTTAGAAGTTTGTTT+TGG | 0.347659 | 8:+67340360 | MsG0880045989.01.T01:CDS |
| AGAGTGTTTAAGATGGTTTA+GGG | 0.373474 | 8:+67340407 | MsG0880045989.01.T01:CDS |
| TGGAAGAGGTATTGTTGATT+TGG | 0.374691 | 8:+67340500 | MsG0880045989.01.T01:CDS |
| ATCACGGTGGTTTCCGGCTC+CGG | 0.383080 | 8:-67340277 | None:intergenic |
| AACTCTTTACATTCGATATC+CGG | 0.397888 | 8:+67340258 | MsG0880045989.01.T01:CDS |
| CGGTGGTGTGGGCCAGTGTA+TGG | 0.430711 | 8:+67340736 | MsG0880045989.01.T01:CDS |
| CTTCCACGACAAGAATATTC+CGG | 0.431546 | 8:-67340706 | None:intergenic |
| GCATGGTGGTGGGTTTAATA+CGG | 0.431980 | 8:+67340587 | MsG0880045989.01.T01:CDS |
| GGAGGAGGTTGCATGGTGGT+GGG | 0.435450 | 8:+67340577 | MsG0880045989.01.T01:CDS |
| TATTAAAGAAGATGAAGCTT+TGG | 0.437246 | 8:+67340221 | MsG0880045989.01.T01:CDS |
| TGTTTATATCTTTGCTTCGT+GGG | 0.441689 | 8:+67340301 | MsG0880045989.01.T01:CDS |
| TTGTTTATATCTTTGCTTCG+TGG | 0.451946 | 8:+67340300 | MsG0880045989.01.T01:CDS |
| TGCTTCGTGGGTTAGAACCT+AGG | 0.461690 | 8:+67340313 | MsG0880045989.01.T01:CDS |
| CGTCTCTCCATTGACTCATA+AGG | 0.462546 | 8:-67340534 | None:intergenic |
| CAGCGTCACGGTGGAGGAGG+AGG | 0.463327 | 8:+67340562 | MsG0880045989.01.T01:CDS |
| TTTGGTTCGGATTTCGTGGA+AGG | 0.470121 | 8:+67340378 | MsG0880045989.01.T01:CDS |
| TGAAGTTTGTGATGATGTTA+GGG | 0.470148 | 8:+67340623 | MsG0880045989.01.T01:CDS |
| ATGTTAGGGCTTTGTTGAGA+AGG | 0.482294 | 8:+67340637 | MsG0880045989.01.T01:CDS |
| GCTTCGTGGGTTAGAACCTA+GGG | 0.504275 | 8:+67340314 | MsG0880045989.01.T01:CDS |
| TTGATGCTAGAAAGAGAAGC+TGG | 0.507592 | 8:+67340480 | MsG0880045989.01.T01:CDS |
| TGTTCCTCCGATGGTGATGC+CGG | 0.512206 | 8:+67340687 | MsG0880045989.01.T01:CDS |
| CGGTGGAGGAGGAGGTTGCA+TGG | 0.514673 | 8:+67340570 | MsG0880045989.01.T01:CDS |
| GAAGGATAAGCCGGTGGTGT+GGG | 0.516813 | 8:+67340725 | MsG0880045989.01.T01:CDS |
| GGAAGGATAAGCCGGTGGTG+TGG | 0.518070 | 8:+67340724 | MsG0880045989.01.T01:CDS |
| CGGAATATTCTTGTCGTGGA+AGG | 0.518332 | 8:+67340707 | MsG0880045989.01.T01:CDS |
| CTAGAAAGAGAAGCTGGAAG+AGG | 0.518793 | 8:+67340486 | MsG0880045989.01.T01:CDS |
| AAACAGCGTCACGGTGGAGG+AGG | 0.519490 | 8:+67340559 | MsG0880045989.01.T01:CDS |
| CATACACTGGCCCACACCAC+CGG | 0.526670 | 8:-67340735 | None:intergenic |
| TTGTTGAGAAGGTATAAAGA+AGG | 0.530989 | 8:+67340648 | MsG0880045989.01.T01:CDS |
| ACCTCAAGGCCTCCATACAC+TGG | 0.532917 | 8:-67340748 | None:intergenic |
| TCAACAATAGTTAAAACCCT+AGG | 0.537053 | 8:-67340330 | None:intergenic |
| TGTTGAGAAGGTATAAAGAA+GGG | 0.543842 | 8:+67340649 | MsG0880045989.01.T01:CDS |
| TTGTGATCCTTATGAGTCAA+TGG | 0.560449 | 8:+67340527 | MsG0880045989.01.T01:CDS |
| GCCAGTGTATGGAGGCCTTG+AGG | 0.566308 | 8:+67340747 | MsG0880045989.01.T01:CDS |
| GTGAAACAGCGTCACGGTGG+AGG | 0.572256 | 8:+67340556 | MsG0880045989.01.T01:CDS |
| GAATATTCCGGCATCACCAT+CGG | 0.580354 | 8:-67340694 | None:intergenic |
| TTTCAAGAACAAGTAGTGAG+AGG | 0.582987 | 8:+67340457 | MsG0880045989.01.T01:CDS |
| TTACATTCGATATCCGGAGC+CGG | 0.585693 | 8:+67340264 | MsG0880045989.01.T01:CDS |
| ATGACACAGTGTTCCTCCGA+TGG | 0.587322 | 8:+67340678 | MsG0880045989.01.T01:CDS |
| CTTGTCGTGGAAGGATAAGC+CGG | 0.587868 | 8:+67340716 | MsG0880045989.01.T01:CDS |
| GCAAAGATATAAACAAATCA+CGG | 0.596997 | 8:-67340293 | None:intergenic |
| TGGTGTGGGCCAGTGTATGG+AGG | 0.609272 | 8:+67340739 | MsG0880045989.01.T01:CDS |
| ATGCCGGAATATTCTTGTCG+TGG | 0.614564 | 8:+67340703 | MsG0880045989.01.T01:CDS |
| TGAGAAGGTATAAAGAAGGG+TGG | 0.652792 | 8:+67340652 | MsG0880045989.01.T01:CDS |
| GTCGTGGAAGGATAAGCCGG+TGG | 0.674105 | 8:+67340719 | MsG0880045989.01.T01:CDS |
| TATTCCGGCATCACCATCGG+AGG | 0.676733 | 8:-67340691 | None:intergenic |
| TGGAGGAGGAGGTTGCATGG+TGG | 0.690855 | 8:+67340573 | MsG0880045989.01.T01:CDS |
| AGAGACGTGAAACAGCGTCA+CGG | 0.722636 | 8:+67340550 | MsG0880045989.01.T01:CDS |
| GACGTGAAACAGCGTCACGG+TGG | 0.727045 | 8:+67340553 | MsG0880045989.01.T01:CDS |
| AAGATATAAACAAATCACGG+TGG | 0.755243 | 8:-67340290 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GCAAAGATATAAACAAATCA+CGG | - | Chr8:67340296-67340315 | None:intergenic | 25.0% |
| ! | TATTAAAGAAGATGAAGCTT+TGG | + | Chr8:67340221-67340240 | MsG0880045989.01.T01:CDS | 25.0% |
| !!! | GTTTTAAAGAGTGTTTAAGA+TGG | + | Chr8:67340400-67340419 | MsG0880045989.01.T01:CDS | 25.0% |
| !!! | TTTAGAAGTTTGTTTTGGTT+CGG | + | Chr8:67340365-67340384 | MsG0880045989.01.T01:CDS | 25.0% |
| AACTCTTTACATTCGATATC+CGG | + | Chr8:67340258-67340277 | MsG0880045989.01.T01:CDS | 30.0% | |
| AAGATATAAACAAATCACGG+TGG | - | Chr8:67340293-67340312 | None:intergenic | 30.0% | |
| TCAACAATAGTTAAAACCCT+AGG | - | Chr8:67340333-67340352 | None:intergenic | 30.0% | |
| TGTTTATATCTTTGCTTCGT+GGG | + | Chr8:67340301-67340320 | MsG0880045989.01.T01:CDS | 30.0% | |
| TTGTTTATATCTTTGCTTCG+TGG | + | Chr8:67340300-67340319 | MsG0880045989.01.T01:CDS | 30.0% | |
| ! | AGAGTGTTTAAGATGGTTTA+GGG | + | Chr8:67340407-67340426 | MsG0880045989.01.T01:CDS | 30.0% |
| ! | ATGAAGTTTGTGATGATGTT+AGG | + | Chr8:67340622-67340641 | MsG0880045989.01.T01:CDS | 30.0% |
| ! | TGAAGTTTGTGATGATGTTA+GGG | + | Chr8:67340623-67340642 | MsG0880045989.01.T01:CDS | 30.0% |
| ! | TGTTGAGAAGGTATAAAGAA+GGG | + | Chr8:67340649-67340668 | MsG0880045989.01.T01:CDS | 30.0% |
| ! | TTGTTGAGAAGGTATAAAGA+AGG | + | Chr8:67340648-67340667 | MsG0880045989.01.T01:CDS | 30.0% |
| !! | AAGAGTGTTTAAGATGGTTT+AGG | + | Chr8:67340406-67340425 | MsG0880045989.01.T01:CDS | 30.0% |
| !! | GCTGATTTAGAAGTTTGTTT+TGG | + | Chr8:67340360-67340379 | MsG0880045989.01.T01:CDS | 30.0% |
| !!! | GGTTTTAACTATTGTTGAAG+AGG | + | Chr8:67340335-67340354 | MsG0880045989.01.T01:CDS | 30.0% |
| TTGTGATCCTTATGAGTCAA+TGG | + | Chr8:67340527-67340546 | MsG0880045989.01.T01:CDS | 35.0% | |
| TTTCAAGAACAAGTAGTGAG+AGG | + | Chr8:67340457-67340476 | MsG0880045989.01.T01:CDS | 35.0% | |
| !! | TGGAAGAGGTATTGTTGATT+TGG | + | Chr8:67340500-67340519 | MsG0880045989.01.T01:CDS | 35.0% |
| AAACAAATCACGGTGGTTTC+CGG | - | Chr8:67340286-67340305 | None:intergenic | 40.0% | |
| CTTCCACGACAAGAATATTC+CGG | - | Chr8:67340709-67340728 | None:intergenic | 40.0% | |
| TTGATGCTAGAAAGAGAAGC+TGG | + | Chr8:67340480-67340499 | MsG0880045989.01.T01:CDS | 40.0% | |
| ! | TGAGAAGGTATAAAGAAGGG+TGG | + | Chr8:67340652-67340671 | MsG0880045989.01.T01:CDS | 40.0% |
| !! | ATGTTAGGGCTTTGTTGAGA+AGG | + | Chr8:67340637-67340656 | MsG0880045989.01.T01:CDS | 40.0% |
| !!! | TTGTTTTGGTTCGGATTTCG+TGG | + | Chr8:67340374-67340393 | MsG0880045989.01.T01:CDS | 40.0% |
| ATGCCGGAATATTCTTGTCG+TGG | + | Chr8:67340703-67340722 | MsG0880045989.01.T01:CDS | 45.0% | |
| CGGAATATTCTTGTCGTGGA+AGG | + | Chr8:67340707-67340726 | MsG0880045989.01.T01:CDS | 45.0% | |
| CTAGAAAGAGAAGCTGGAAG+AGG | + | Chr8:67340486-67340505 | MsG0880045989.01.T01:CDS | 45.0% | |
| GAATATTCCGGCATCACCAT+CGG | - | Chr8:67340697-67340716 | None:intergenic | 45.0% | |
| TTACATTCGATATCCGGAGC+CGG | + | Chr8:67340264-67340283 | MsG0880045989.01.T01:CDS | 45.0% | |
| !! | CGTCTCTCCATTGACTCATA+AGG | - | Chr8:67340537-67340556 | None:intergenic | 45.0% |
| !! | GCATGGTGGTGGGTTTAATA+CGG | + | Chr8:67340587-67340606 | MsG0880045989.01.T01:CDS | 45.0% |
| !! | TTTGGTTCGGATTTCGTGGA+AGG | + | Chr8:67340378-67340397 | MsG0880045989.01.T01:CDS | 45.0% |
| !!! | AAAATAATTTTGAATTTAAA+CGG | - | Chr8:67340165-67340184 | None:intergenic | 5.0% |
| AGAGACGTGAAACAGCGTCA+CGG | + | Chr8:67340550-67340569 | MsG0880045989.01.T01:CDS | 50.0% | |
| ATGACACAGTGTTCCTCCGA+TGG | + | Chr8:67340678-67340697 | MsG0880045989.01.T01:CDS | 50.0% | |
| CTTGTCGTGGAAGGATAAGC+CGG | + | Chr8:67340716-67340735 | MsG0880045989.01.T01:CDS | 50.0% | |
| !! | GCTTCGTGGGTTAGAACCTA+GGG | + | Chr8:67340314-67340333 | MsG0880045989.01.T01:CDS | 50.0% |
| !! | TGCTTCGTGGGTTAGAACCT+AGG | + | Chr8:67340313-67340332 | MsG0880045989.01.T01:CDS | 50.0% |
| GAAGGATAAGCCGGTGGTGT+GGG | + | Chr8:67340725-67340744 | MsG0880045989.01.T01:CDS | 55.0% | |
| TATTCCGGCATCACCATCGG+AGG | - | Chr8:67340694-67340713 | None:intergenic | 55.0% | |
| ! | TGTTCCTCCGATGGTGATGC+CGG | + | Chr8:67340687-67340706 | MsG0880045989.01.T01:CDS | 55.0% |
| AAACAGCGTCACGGTGGAGG+AGG | + | Chr8:67340559-67340578 | MsG0880045989.01.T01:CDS | 60.0% | |
| AGGAGGAGGTTGCATGGTGG+TGG | + | Chr8:67340576-67340595 | MsG0880045989.01.T01:CDS | 60.0% | |
| ATCACGGTGGTTTCCGGCTC+CGG | - | Chr8:67340280-67340299 | None:intergenic | 60.0% | |
| CATACACTGGCCCACACCAC+CGG | - | Chr8:67340738-67340757 | None:intergenic | 60.0% | |
| GACGTGAAACAGCGTCACGG+TGG | + | Chr8:67340553-67340572 | MsG0880045989.01.T01:CDS | 60.0% | |
| GGAAGGATAAGCCGGTGGTG+TGG | + | Chr8:67340724-67340743 | MsG0880045989.01.T01:CDS | 60.0% | |
| GGAGGAGGTTGCATGGTGGT+GGG | + | Chr8:67340577-67340596 | MsG0880045989.01.T01:CDS | 60.0% | |
| GTCGTGGAAGGATAAGCCGG+TGG | + | Chr8:67340719-67340738 | MsG0880045989.01.T01:CDS | 60.0% | |
| GTGAAACAGCGTCACGGTGG+AGG | + | Chr8:67340556-67340575 | MsG0880045989.01.T01:CDS | 60.0% | |
| TGGAGGAGGAGGTTGCATGG+TGG | + | Chr8:67340573-67340592 | MsG0880045989.01.T01:CDS | 60.0% | |
| TGGTGTGGGCCAGTGTATGG+AGG | + | Chr8:67340739-67340758 | MsG0880045989.01.T01:CDS | 60.0% | |
| CGGTGGAGGAGGAGGTTGCA+TGG | + | Chr8:67340570-67340589 | MsG0880045989.01.T01:CDS | 65.0% | |
| CGGTGGTGTGGGCCAGTGTA+TGG | + | Chr8:67340736-67340755 | MsG0880045989.01.T01:CDS | 65.0% | |
| CAGCGTCACGGTGGAGGAGG+AGG | + | Chr8:67340562-67340581 | MsG0880045989.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 67340153 | 67340767 | 67340153 | ID=MsG0880045989.01;Name=MsG0880045989.01 |
| Chr8 | mRNA | 67340153 | 67340767 | 67340153 | ID=MsG0880045989.01.T01;Parent=MsG0880045989.01;Name=MsG0880045989.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|204 |
| Chr8 | exon | 67340153 | 67340767 | 67340153 | ID=MsG0880045989.01.T01:exon:13956;Parent=MsG0880045989.01.T01 |
| Chr8 | CDS | 67340153 | 67340767 | 67340153 | ID=MsG0880045989.01.T01:cds;Parent=MsG0880045989.01.T01 |
| Gene Sequence |
| Protein sequence |
