Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041837.01.T01 | XP_013443816.1 | 90.706 | 538 | 13 | 2 | 1 | 507 | 192 | 723 | 0 | 953 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041837.01.T01 | Q93YU8 | 63.42 | 462 | 133 | 5 | 77 | 507 | 340 | 796 | 0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041837.01.T01 | A0A072TKX3 | 90.706 | 538 | 13 | 2 | 1 | 507 | 192 | 723 | 0.0 | 953 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0880041837.01 | 0.810279 | 1.247657e-50 | 7.488935e-48 |
| MsG0080048258.01 | MsG0880041837.01 | 0.823993 | 1.026896e-53 | 8.981104e-51 |
| MsG0080048781.01 | MsG0880041837.01 | 0.803547 | 3.309922e-49 | 1.668039e-46 |
| MsG0080048948.01 | MsG0880041837.01 | -0.812266 | 4.623097e-51 | 2.925949e-48 |
| MsG0180000076.01 | MsG0880041837.01 | 0.816952 | 4.242242e-52 | 3.048792e-49 |
| MsG0180000111.01 | MsG0880041837.01 | 0.807091 | 5.986791e-50 | 3.304541e-47 |
| MsG0180000601.01 | MsG0880041837.01 | 0.817350 | 3.452210e-52 | 2.507951e-49 |
| MsG0180001293.01 | MsG0880041837.01 | 0.819491 | 1.129361e-52 | 8.703998e-50 |
| MsG0180001719.01 | MsG0880041837.01 | 0.813782 | 2.149869e-51 | 1.417101e-48 |
| MsG0180002397.01 | MsG0880041837.01 | 0.804457 | 2.140662e-49 | 1.104265e-46 |
| MsG0180002583.01 | MsG0880041837.01 | 0.823965 | 1.042636e-53 | 9.112468e-51 |
| MsG0180003796.01 | MsG0880041837.01 | 0.830523 | 2.798802e-55 | 2.956049e-52 |
| MsG0180003857.01 | MsG0880041837.01 | 0.821593 | 3.717218e-53 | 3.037242e-50 |
| MsG0180004120.01 | MsG0880041837.01 | 0.819303 | 1.246890e-52 | 9.558349e-50 |
| MsG0180004124.01 | MsG0880041837.01 | -0.813446 | 2.549147e-51 | 1.665154e-48 |
| MsG0180004125.01 | MsG0880041837.01 | -0.816405 | 5.624544e-52 | 3.981797e-49 |
| MsG0180004559.01 | MsG0880041837.01 | 0.801078 | 1.066690e-48 | 5.048352e-46 |
| MsG0180004583.01 | MsG0880041837.01 | 0.816330 | 5.846592e-52 | 4.130797e-49 |
| MsG0180005835.01 | MsG0880041837.01 | 0.835723 | 1.421153e-56 | 1.752795e-53 |
| MsG0180006133.01 | MsG0880041837.01 | 0.820977 | 5.156978e-53 | 4.142461e-50 |
| MsG0780040364.01 | MsG0880041837.01 | 0.840030 | 1.111382e-57 | 1.563390e-54 |
| MsG0780040641.01 | MsG0880041837.01 | 0.812591 | 3.924962e-51 | 2.505667e-48 |
| MsG0780041008.01 | MsG0880041837.01 | 0.839861 | 1.229603e-57 | 1.720304e-54 |
| MsG0780041100.01 | MsG0880041837.01 | 0.805778 | 1.132749e-49 | 6.045635e-47 |
| MsG0780041271.01 | MsG0880041837.01 | 0.806120 | 9.595911e-50 | 5.166447e-47 |
| MsG0880041837.01 | MsG0880042906.01 | 0.807595 | 4.682382e-50 | 2.618479e-47 |
| MsG0880041837.01 | MsG0880042927.01 | 0.819610 | 1.060977e-52 | 8.203438e-50 |
| MsG0880041837.01 | MsG0880044984.01 | 0.823955 | 1.047868e-53 | 9.155775e-51 |
| MsG0880041837.01 | MsG0880044989.01 | 0.847179 | 1.362397e-59 | 2.401585e-56 |
| MsG0880041837.01 | MsG0880045439.01 | 0.820139 | 8.031428e-53 | 6.303014e-50 |
| MsG0880041837.01 | MsG0880045584.01 | 0.834975 | 2.196432e-56 | 2.648974e-53 |
| MsG0880041837.01 | MsG0880045612.01 | 0.831696 | 1.441827e-55 | 1.576774e-52 |
| MsG0880041837.01 | MsG0880045647.01 | 0.802924 | 4.453925e-49 | 2.208910e-46 |
| MsG0880041837.01 | MsG0880045989.01 | 0.842903 | 1.945580e-58 | 2.993016e-55 |
| MsG0880041837.01 | MsG0880046431.01 | 0.807679 | 4.493077e-50 | 2.518271e-47 |
| MsG0880041837.01 | MsG0880046905.01 | 0.805633 | 1.215036e-49 | 6.460514e-47 |
| MsG0880041837.01 | MsG0880047223.01 | 0.812132 | 4.944611e-51 | 3.118021e-48 |
| MsG0880041837.01 | MsG0880047649.01 | 0.846471 | 2.127838e-59 | 3.666770e-56 |
| MsG0380012472.01 | MsG0880041837.01 | 0.800396 | 1.469884e-48 | 6.836918e-46 |
| MsG0380013041.01 | MsG0880041837.01 | 0.810097 | 1.365233e-50 | 8.156242e-48 |
| MsG0380014666.01 | MsG0880041837.01 | 0.808656 | 2.781884e-50 | 1.599632e-47 |
| MsG0680034415.01 | MsG0880041837.01 | 0.812373 | 4.379454e-51 | 2.779677e-48 |
| MsG0480018526.01 | MsG0880041837.01 | 0.840081 | 1.077730e-57 | 1.518467e-54 |
| MsG0480018767.01 | MsG0880041837.01 | 0.804818 | 1.799609e-49 | 9.370935e-47 |
| MsG0480021456.01 | MsG0880041837.01 | 0.808261 | 3.377583e-50 | 1.922375e-47 |
| MsG0480021773.01 | MsG0880041837.01 | 0.815322 | 9.809033e-52 | 6.741337e-49 |
| MsG0480021902.01 | MsG0880041837.01 | 0.817651 | 2.951874e-52 | 2.162269e-49 |
| MsG0480022378.01 | MsG0880041837.01 | 0.826570 | 2.522750e-54 | 2.374730e-51 |
| MsG0480022784.01 | MsG0880041837.01 | 0.808120 | 3.620692e-50 | 2.052971e-47 |
| MsG0480023003.01 | MsG0880041837.01 | 0.800228 | 1.590211e-48 | 7.365091e-46 |
| MsG0480023324.01 | MsG0880041837.01 | 0.803197 | 3.911354e-49 | 1.953413e-46 |
| MsG0480023532.01 | MsG0880041837.01 | 0.869011 | 4.262571e-66 | 1.574582e-62 |
| MsG0480024002.01 | MsG0880041837.01 | 0.812354 | 4.422812e-51 | 2.805905e-48 |
| MsG0580024060.01 | MsG0880041837.01 | 0.801691 | 7.990106e-49 | 3.840146e-46 |
| MsG0580024787.01 | MsG0880041837.01 | 0.811045 | 8.518874e-51 | 5.219063e-48 |
| MsG0580024954.01 | MsG0880041837.01 | 0.856516 | 3.051368e-62 | 7.303159e-59 |
| MsG0580025056.01 | MsG0880041837.01 | 0.808141 | 3.583205e-50 | 2.032893e-47 |
| MsG0580025186.01 | MsG0880041837.01 | 0.812311 | 4.519685e-51 | 2.863913e-48 |
| MsG0580025464.01 | MsG0880041837.01 | 0.838353 | 3.023814e-57 | 4.039474e-54 |
| MsG0580025515.01 | MsG0880041837.01 | 0.824420 | 8.149583e-54 | 7.214340e-51 |
| MsG0380015161.01 | MsG0880041837.01 | 0.830628 | 2.638754e-55 | 2.795526e-52 |
| MsG0380015340.01 | MsG0880041837.01 | 0.803033 | 4.227458e-49 | 2.102397e-46 |
| MsG0380015394.01 | MsG0880041837.01 | 0.808525 | 2.966847e-50 | 1.700294e-47 |
| MsG0380015552.01 | MsG0880041837.01 | 0.848354 | 6.467632e-60 | 1.183632e-56 |
| MsG0380015954.01 | MsG0880041837.01 | 0.837000 | 6.725991e-57 | 8.621187e-54 |
| MsG0380016110.01 | MsG0880041837.01 | 0.811916 | 5.510282e-51 | 3.454177e-48 |
| MsG0380017150.01 | MsG0880041837.01 | 0.801110 | 1.050710e-48 | 4.976666e-46 |
| MsG0380017632.01 | MsG0880041837.01 | 0.803627 | 3.184847e-49 | 1.608262e-46 |
| MsG0380017989.01 | MsG0880041837.01 | 0.806583 | 7.667049e-50 | 4.176820e-47 |
| MsG0480018228.01 | MsG0880041837.01 | 0.805578 | 1.247350e-49 | 6.622949e-47 |
| MsG0580028927.01 | MsG0880041837.01 | 0.849141 | 3.912049e-60 | 7.346818e-57 |
| MsG0580029591.01 | MsG0880041837.01 | 0.834182 | 3.475539e-56 | 4.092399e-53 |
| MsG0580030179.01 | MsG0880041837.01 | 0.836821 | 7.472464e-57 | 9.526213e-54 |
| MsG0280006909.01 | MsG0880041837.01 | 0.801577 | 8.432529e-49 | 4.041195e-46 |
| MsG0280008407.01 | MsG0880041837.01 | 0.813807 | 2.122673e-51 | 1.400193e-48 |
| MsG0780038402.01 | MsG0880041837.01 | 0.809918 | 1.491765e-50 | 8.870675e-48 |
| MsG0780038736.01 | MsG0880041837.01 | 0.828412 | 9.119506e-55 | 9.058062e-52 |
| MsG0780038810.01 | MsG0880041837.01 | 0.826127 | 3.216628e-54 | 2.990041e-51 |
| MsG0780039303.01 | MsG0880041837.01 | 0.800264 | 1.563978e-48 | 7.250225e-46 |
| MsG0780039861.01 | MsG0880041837.01 | 0.839986 | 1.141018e-57 | 1.602856e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041837.01.T01 | MTR_8g006850 | 90.706 | 538 | 13 | 2 | 1 | 507 | 192 | 723 | 0.0 | 953 |
| MsG0880041837.01.T01 | MTR_7g081705 | 64.972 | 531 | 116 | 9 | 37 | 507 | 323 | 843 | 0.0 | 652 |
| MsG0880041837.01.T01 | MTR_5g022530 | 42.204 | 372 | 196 | 6 | 132 | 503 | 283 | 635 | 6.24e-90 | 288 |
| MsG0880041837.01.T01 | MTR_2g048360 | 33.962 | 371 | 212 | 7 | 140 | 503 | 289 | 633 | 1.29e-53 | 191 |
| MsG0880041837.01.T01 | MTR_3g109450 | 31.006 | 358 | 227 | 8 | 147 | 499 | 358 | 700 | 2.25e-48 | 178 |
| MsG0880041837.01.T01 | MTR_2g102050 | 31.304 | 345 | 226 | 6 | 147 | 489 | 403 | 738 | 4.04e-46 | 172 |
| MsG0880041837.01.T01 | MTR_4g012430 | 36.226 | 265 | 161 | 3 | 145 | 409 | 205 | 461 | 5.20e-42 | 157 |
| MsG0880041837.01.T01 | MTR_1g112850 | 29.262 | 393 | 256 | 7 | 102 | 489 | 334 | 709 | 8.51e-41 | 156 |
| MsG0880041837.01.T01 | MTR_3g088190 | 29.640 | 361 | 243 | 6 | 143 | 499 | 546 | 899 | 2.48e-40 | 155 |
| MsG0880041837.01.T01 | MTR_4g127620 | 30.992 | 242 | 157 | 5 | 148 | 381 | 423 | 662 | 2.19e-26 | 113 |
| MsG0880041837.01.T01 | MTR_5g087740 | 33.621 | 232 | 137 | 5 | 145 | 367 | 429 | 652 | 8.41e-25 | 108 |
| MsG0880041837.01.T01 | MTR_2g036920 | 39.106 | 179 | 97 | 4 | 148 | 316 | 599 | 775 | 2.42e-24 | 107 |
| MsG0880041837.01.T01 | MTR_2g036920 | 39.106 | 179 | 97 | 4 | 148 | 316 | 570 | 746 | 2.78e-24 | 107 |
| MsG0880041837.01.T01 | MTR_5g098980 | 24.789 | 355 | 231 | 7 | 144 | 495 | 434 | 755 | 3.84e-24 | 107 |
| MsG0880041837.01.T01 | MTR_8g091250 | 29.433 | 282 | 182 | 8 | 121 | 391 | 353 | 628 | 6.07e-24 | 106 |
| MsG0880041837.01.T01 | MTR_3g096950 | 27.246 | 345 | 237 | 6 | 146 | 489 | 433 | 764 | 6.37e-24 | 106 |
| MsG0880041837.01.T01 | MTR_3g078830 | 32.751 | 229 | 147 | 3 | 145 | 369 | 445 | 670 | 1.01e-22 | 102 |
| MsG0880041837.01.T01 | MTR_3g115120 | 25.316 | 395 | 231 | 10 | 115 | 490 | 321 | 670 | 1.93e-22 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041837.01.T01 | AT3G60320 | 63.420 | 462 | 133 | 5 | 77 | 507 | 340 | 796 | 0.0 | 574 |
| MsG0880041837.01.T01 | AT1G02110 | 55.636 | 550 | 171 | 12 | 15 | 506 | 168 | 702 | 0.0 | 573 |
| MsG0880041837.01.T01 | AT3G51290 | 38.444 | 450 | 221 | 9 | 92 | 506 | 200 | 628 | 2.76e-89 | 286 |
| MsG0880041837.01.T01 | AT3G51290 | 38.667 | 450 | 220 | 9 | 92 | 506 | 200 | 628 | 3.83e-87 | 285 |
| MsG0880041837.01.T01 | AT3G51290 | 38.000 | 450 | 217 | 10 | 92 | 506 | 200 | 622 | 2.18e-83 | 271 |
| MsG0880041837.01.T01 | AT2G34670 | 34.332 | 367 | 224 | 6 | 134 | 499 | 324 | 674 | 5.62e-62 | 215 |
| MsG0880041837.01.T01 | AT5G25590 | 31.405 | 363 | 223 | 6 | 147 | 499 | 412 | 758 | 2.04e-48 | 179 |
| MsG0880041837.01.T01 | AT1G52320 | 30.725 | 345 | 227 | 6 | 147 | 489 | 106 | 440 | 5.37e-48 | 173 |
| MsG0880041837.01.T01 | AT1G52320 | 30.725 | 345 | 227 | 6 | 147 | 489 | 106 | 440 | 5.37e-48 | 173 |
| MsG0880041837.01.T01 | AT1G52320 | 30.725 | 345 | 227 | 6 | 147 | 489 | 409 | 743 | 3.21e-46 | 172 |
| MsG0880041837.01.T01 | AT1G52320 | 30.725 | 345 | 227 | 6 | 147 | 489 | 432 | 766 | 3.28e-46 | 172 |
| MsG0880041837.01.T01 | AT1G52320 | 30.725 | 345 | 227 | 6 | 147 | 489 | 432 | 766 | 3.28e-46 | 172 |
| MsG0880041837.01.T01 | AT1G21740 | 29.050 | 358 | 246 | 5 | 145 | 499 | 589 | 941 | 1.40e-39 | 154 |
| MsG0880041837.01.T01 | AT1G77500 | 28.889 | 360 | 221 | 7 | 145 | 499 | 541 | 870 | 1.17e-33 | 136 |
| MsG0880041837.01.T01 | AT2G34670 | 33.628 | 226 | 142 | 4 | 134 | 359 | 324 | 541 | 3.54e-33 | 133 |
| MsG0880041837.01.T01 | AT4G35240 | 26.301 | 365 | 229 | 7 | 144 | 503 | 502 | 831 | 1.33e-27 | 117 |
| MsG0880041837.01.T01 | AT4G35240 | 26.301 | 365 | 229 | 7 | 144 | 503 | 502 | 831 | 1.33e-27 | 117 |
| MsG0880041837.01.T01 | AT4G35240 | 26.301 | 365 | 229 | 7 | 144 | 503 | 502 | 831 | 1.35e-27 | 117 |
| MsG0880041837.01.T01 | AT4G35240 | 26.301 | 365 | 229 | 7 | 144 | 503 | 502 | 831 | 1.35e-27 | 117 |
| MsG0880041837.01.T01 | AT2G17110 | 30.769 | 234 | 156 | 4 | 144 | 373 | 399 | 630 | 5.90e-27 | 115 |
| MsG0880041837.01.T01 | AT2G27090 | 33.621 | 232 | 144 | 6 | 145 | 371 | 425 | 651 | 9.53e-25 | 108 |
| MsG0880041837.01.T01 | AT2G27090 | 33.621 | 232 | 144 | 6 | 145 | 371 | 425 | 651 | 9.53e-25 | 108 |
| MsG0880041837.01.T01 | AT4G39790 | 31.696 | 224 | 146 | 5 | 148 | 367 | 375 | 595 | 5.24e-23 | 103 |
| MsG0880041837.01.T01 | AT4G30130 | 31.429 | 245 | 153 | 5 | 148 | 381 | 401 | 641 | 4.23e-22 | 100 |
| MsG0880041837.01.T01 | AT4G30130 | 31.429 | 245 | 153 | 5 | 148 | 381 | 401 | 641 | 4.23e-22 | 100 |
| MsG0880041837.01.T01 | AT2G19090 | 29.880 | 251 | 151 | 5 | 148 | 381 | 482 | 724 | 2.19e-21 | 98.6 |
| MsG0880041837.01.T01 | AT5G54480 | 24.124 | 485 | 287 | 13 | 57 | 499 | 270 | 715 | 1.31e-20 | 95.9 |
| MsG0880041837.01.T01 | AT1G20530 | 24.311 | 399 | 239 | 11 | 77 | 433 | 219 | 596 | 7.56e-18 | 87.0 |
| MsG0880041837.01.T01 | AT4G30130 | 43.210 | 81 | 45 | 1 | 148 | 228 | 401 | 480 | 7.46e-12 | 68.2 |
| MsG0880041837.01.T01 | AT4G30130 | 43.210 | 81 | 45 | 1 | 148 | 228 | 401 | 480 | 7.46e-12 | 68.2 |
Find 102 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATAAATTACCTACTTTA+TGG | 0.098163 | 8:+65863 | None:intergenic |
| CTCCACTTTGGACCGGCTTT+TGG | 0.216350 | 8:-68893 | MsG0880041837.01.T01:CDS |
| CAGCTGCCATCAATGGTCTT+AGG | 0.218432 | 8:-67877 | MsG0880041837.01.T01:CDS |
| CCAATATCTTCCACAGAGTT+TGG | 0.255194 | 8:+66113 | None:intergenic |
| GTCAAGAACTCAAGATTAAA+AGG | 0.266491 | 8:-66241 | MsG0880041837.01.T01:CDS |
| CCAAACTCTGTGGAAGATAT+TGG | 0.303854 | 8:-66113 | MsG0880041837.01.T01:CDS |
| ATGGGAAAACAAACTCTTTC+AGG | 0.306558 | 8:-68869 | MsG0880041837.01.T01:CDS |
| AGGTTTGCCTGGAATGTTTC+AGG | 0.312214 | 8:-65949 | MsG0880041837.01.T01:CDS |
| TCATATTCTATGGTTGGTAT+TGG | 0.351215 | 8:-66143 | MsG0880041837.01.T01:CDS |
| CAATGTTGCTTTGCGTTTCA+TGG | 0.352365 | 8:+66621 | None:intergenic |
| AAAGTGGAGCAGAGGCTCTT+TGG | 0.352489 | 8:+68907 | None:intergenic |
| TGTTGCCGGCGGTGAGGTTC+CGG | 0.353203 | 8:-69435 | MsG0880041837.01.T01:CDS |
| CAGCAGCATTAGCAACAAAA+TGG | 0.360224 | 8:-66390 | MsG0880041837.01.T01:CDS |
| TCACCGCCGGCAACAAATTC+CGG | 0.362313 | 8:+69443 | None:intergenic |
| GCTTCCGAAGCGACAGTGTC+TGG | 0.370101 | 8:+66311 | None:intergenic |
| TGCTTTGCGTTTCATGGTAC+TGG | 0.378095 | 8:+66627 | None:intergenic |
| AACTGCCAATGGTGGCTTTG+AGG | 0.395022 | 8:+68972 | None:intergenic |
| TTTGATGCCGGTTCACTTGA+AGG | 0.399037 | 8:-68940 | MsG0880041837.01.T01:CDS |
| TAGTGACTGTAACCTTGTTA+TGG | 0.407255 | 8:+67934 | None:intergenic |
| AGGAGGTTCGGTGTAGTGAT+TGG | 0.415100 | 8:-69541 | MsG0880041837.01.T01:CDS |
| GTCAATGCCTGAAACATTCC+AGG | 0.419912 | 8:+65942 | None:intergenic |
| AGCTGCCATCAATGGTCTTA+GGG | 0.421008 | 8:-67876 | MsG0880041837.01.T01:CDS |
| CAGCTTGTTGAGCTTTGTCA+TGG | 0.421587 | 8:-67836 | MsG0880041837.01.T01:CDS |
| AGTTGCCTGTTTGTGTGATT+CGG | 0.424981 | 8:+66547 | None:intergenic |
| GCCCGGTCCTTCAAGTGAAC+CGG | 0.428595 | 8:+68933 | None:intergenic |
| AGAGTCCCTAAGACCATTGA+TGG | 0.436049 | 8:+67871 | None:intergenic |
| TAACCTTGTTATGGTAGCCT+TGG | 0.439375 | 8:+67943 | None:intergenic |
| AACATCCGAATCACACAAAC+AGG | 0.442893 | 8:-66552 | MsG0880041837.01.T01:CDS |
| AACATTGTACAGCAAGTTTG+TGG | 0.443164 | 8:-66605 | MsG0880041837.01.T01:CDS |
| AAATCACCGGAATTTGTTGC+CGG | 0.450095 | 8:-69449 | MsG0880041837.01.T01:CDS |
| AATCTACAGACAGGTTTGCC+TGG | 0.453101 | 8:-65960 | MsG0880041837.01.T01:CDS |
| CACCATTGGCAGTTAAATAC+CGG | 0.462465 | 8:-68963 | MsG0880041837.01.T01:CDS |
| TTGTTGTTGTCATTGTTGAC+TGG | 0.464323 | 8:+66413 | None:intergenic |
| CGAGGAGGTGAATGAAGAAA+AGG | 0.465133 | 8:-69402 | MsG0880041837.01.T01:CDS |
| GGAGGTTCGGTGTAGTGATT+GGG | 0.467726 | 8:-69540 | MsG0880041837.01.T01:CDS |
| TGCCGGTTCACTTGAAGGAC+CGG | 0.468386 | 8:-68935 | MsG0880041837.01.T01:CDS |
| ACTAATTATTGTAACATCTC+AGG | 0.470791 | 8:-67915 | MsG0880041837.01.T01:CDS |
| GTTAAATACCGGTTTGATGC+CGG | 0.472409 | 8:-68952 | MsG0880041837.01.T01:CDS |
| GAAAACTGACACTGCTTACA+AGG | 0.482447 | 8:-66219 | MsG0880041837.01.T01:CDS |
| TACAACTCATATTCTATGGT+TGG | 0.486108 | 8:-66149 | MsG0880041837.01.T01:CDS |
| AAAGGTGAAGATGAAGCATA+AGG | 0.487575 | 8:-69384 | MsG0880041837.01.T01:CDS |
| AAACGGAACGTGAGGAGGTT+CGG | 0.488757 | 8:-69553 | MsG0880041837.01.T01:CDS |
| AAAGAGCCTCTGCTCCACTT+TGG | 0.490480 | 8:-68905 | MsG0880041837.01.T01:CDS |
| TTTGAGAAAGCGGCGGTGGC+CGG | 0.491434 | 8:-69326 | MsG0880041837.01.T01:CDS |
| TGTTCCAGACACTGTCGCTT+CGG | 0.496334 | 8:-66315 | MsG0880041837.01.T01:CDS |
| ACCTCCTCGTCTTTCCTCAC+CGG | 0.497977 | 8:+69416 | None:intergenic |
| ACTACCTCAGCTGCCATCAA+TGG | 0.500376 | 8:-67884 | MsG0880041837.01.T01:CDS |
| GAAGCATTCGAAGGCTATTG+AGG | 0.506274 | 8:-66006 | MsG0880041837.01.T01:CDS |
| GTGTGAAGATTGAGCATGAA+AGG | 0.511307 | 8:-68030 | MsG0880041837.01.T01:CDS |
| TAGTTTCCATCCATCACAAA+AGG | 0.515874 | 8:+66349 | None:intergenic |
| CTTGTGAACCAATCATCAAA+AGG | 0.523864 | 8:-66581 | MsG0880041837.01.T01:CDS |
| GGAACAAGAACTAGATCGAT+TGG | 0.523973 | 8:-69576 | MsG0880041837.01.T01:CDS |
| AGCTTGTTGAGCTTTGTCAT+GGG | 0.524450 | 8:-67835 | MsG0880041837.01.T01:intron |
| TAGAATCAGCTCTGTCAGCT+TGG | 0.525936 | 8:-66517 | MsG0880041837.01.T01:CDS |
| CAAGTGAACCGGCATCAAAC+CGG | 0.530021 | 8:+68944 | None:intergenic |
| TGAGCAAAGTGAGCTCAACT+TGG | 0.530284 | 8:-68996 | MsG0880041837.01.T01:intron |
| AAGCGGCGGTGGCCGGAGAT+CGG | 0.531676 | 8:-69319 | MsG0880041837.01.T01:intron |
| CAGAGGCTCTTTGGACCGCC+CGG | 0.533714 | 8:+68916 | None:intergenic |
| GGAAGATATTGGACAAGGCT+TGG | 0.535265 | 8:-66102 | MsG0880041837.01.T01:CDS |
| AGAACTAGATCGATTGGAAA+CGG | 0.539459 | 8:-69570 | MsG0880041837.01.T01:CDS |
| TCAGAATCACAAGACTGAAA+CGG | 0.540629 | 8:-69597 | MsG0880041837.01.T01:CDS |
| ACACTTAATAATCTACAGAC+AGG | 0.546583 | 8:-65969 | MsG0880041837.01.T01:CDS |
| GCCTCTGCTCCACTTTGGAC+CGG | 0.546977 | 8:-68900 | MsG0880041837.01.T01:CDS |
| TTGCTTAATTAGGCTAGAGA+AGG | 0.551085 | 8:-68052 | MsG0880041837.01.T01:intron |
| ATTGGAAACGGAACGTGAGG+AGG | 0.556480 | 8:-69558 | MsG0880041837.01.T01:CDS |
| GGAATTTGTTGCCGGCGGTG+AGG | 0.568540 | 8:-69441 | MsG0880041837.01.T01:CDS |
| CAAAAGGAAAATGCATCAGA+TGG | 0.571615 | 8:+66365 | None:intergenic |
| AACCGGTATTTAACTGCCAA+TGG | 0.572575 | 8:+68961 | None:intergenic |
| CCGTTCATATGCCATAAAGT+AGG | 0.573938 | 8:-65874 | None:intergenic |
| TTGGACCTCAAAGCCACCAT+TGG | 0.576071 | 8:-68977 | MsG0880041837.01.T01:CDS |
| CAGTGTCTGGAACACGGTCA+AGG | 0.579288 | 8:+66324 | None:intergenic |
| TGCCAAAAGCCGGTCCAAAG+TGG | 0.581464 | 8:+68891 | None:intergenic |
| CAAACTCTTTCAGGAAGTGA+AGG | 0.582816 | 8:-68860 | MsG0880041837.01.T01:intron |
| TCTGCAGAGTGAAGAATGCA+AGG | 0.582873 | 8:-67996 | MsG0880041837.01.T01:CDS |
| TATCGCCGGTTTGAAGTCAT+CGG | 0.584629 | 8:-69474 | MsG0880041837.01.T01:CDS |
| GATAGAGATGAAGTTATCGC+CGG | 0.585630 | 8:-69488 | MsG0880041837.01.T01:CDS |
| GCCGGTTCACTTGAAGGACC+GGG | 0.588752 | 8:-68934 | MsG0880041837.01.T01:CDS |
| GCCGGTCCAAAGTGGAGCAG+AGG | 0.591183 | 8:+68899 | None:intergenic |
| CATCTCCGATAACCGATCTC+CGG | 0.591527 | 8:+69307 | None:intergenic |
| GGTTCGGTGTAGTGATTGGG+AGG | 0.592402 | 8:-69537 | MsG0880041837.01.T01:CDS |
| AGTGTCTGGAACACGGTCAA+GGG | 0.596369 | 8:+66325 | None:intergenic |
| AAGACCATTGATGGCAGCTG+AGG | 0.609697 | 8:+67880 | None:intergenic |
| CGGTATTTAACTGCCAATGG+TGG | 0.612149 | 8:+68964 | None:intergenic |
| TGGAATAATTCCAAACTCTG+TGG | 0.623866 | 8:-66123 | MsG0880041837.01.T01:CDS |
| AACATAGAATCATTCACATG+TGG | 0.629855 | 8:-66661 | MsG0880041837.01.T01:intron |
| TGAAAAGTTGAAGCATTCGA+AGG | 0.634173 | 8:-66015 | MsG0880041837.01.T01:CDS |
| TCGATTGGAAACGGAACGTG+AGG | 0.636903 | 8:-69561 | MsG0880041837.01.T01:CDS |
| CAGAGTGAAGAATGCAAGGG+AGG | 0.640119 | 8:-67992 | MsG0880041837.01.T01:CDS |
| CCTACTTTATGGCATATGAA+CGG | 0.642947 | 8:+65874 | None:intergenic |
| TGACAAAGCTCAACAAGCTG+AGG | 0.646039 | 8:+67839 | None:intergenic |
| AAACCAAGGCTACCATAACA+AGG | 0.647826 | 8:-67946 | MsG0880041837.01.T01:CDS |
| TCACCGGAATTTGTTGCCGG+CGG | 0.648273 | 8:-69446 | MsG0880041837.01.T01:CDS |
| AAGCGACAGTGTCTGGAACA+CGG | 0.656033 | 8:+66318 | None:intergenic |
| ATTGCTTAACTGATATTACG+TGG | 0.657821 | 8:+66264 | None:intergenic |
| CCTCACCGGAACCTCACCGC+CGG | 0.660549 | 8:+69430 | None:intergenic |
| CTGCAGAGTGAAGAATGCAA+GGG | 0.667767 | 8:-67995 | MsG0880041837.01.T01:CDS |
| AACAAAGATAGACAAAACCA+AGG | 0.673276 | 8:-67960 | MsG0880041837.01.T01:CDS |
| TCCGGTGAGGAAAGACGAGG+AGG | 0.676721 | 8:-69417 | MsG0880041837.01.T01:CDS |
| CCGGCGGTGAGGTTCCGGTG+AGG | 0.679781 | 8:-69430 | MsG0880041837.01.T01:CDS |
| TCTGTGGAAGATATTGGACA+AGG | 0.692232 | 8:-66107 | MsG0880041837.01.T01:CDS |
| GGTTCCGGTGAGGAAAGACG+AGG | 0.762077 | 8:-69420 | MsG0880041837.01.T01:CDS |
| GGTTCACTTGAAGGACCGGG+CGG | 0.787079 | 8:-68931 | MsG0880041837.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATCATATATTTAAATTG+GGG | - | Chr8:67807-67826 | MsG0880041837.01.T01:intron | 10.0% |
| !! | AAATAGTATTTGAGAAAATA+TGG | - | Chr8:68018-68037 | MsG0880041837.01.T01:CDS | 15.0% |
| !! | ATATTGAAATTTGAATTGTA+AGG | + | Chr8:68638-68657 | None:intergenic | 15.0% |
| !! | ATGAAATTGGAAAATTATAA+TGG | - | Chr8:68560-68579 | MsG0880041837.01.T01:intron | 15.0% |
| !! | TAATCATATATTTAAATTGG+GGG | - | Chr8:67808-67827 | MsG0880041837.01.T01:intron | 15.0% |
| !! | TATATAGTACTAATAATTGA+TGG | - | Chr8:66792-66811 | MsG0880041837.01.T01:intron | 15.0% |
| !! | TATTGAAATTTGAATTGTAA+GGG | + | Chr8:68637-68656 | None:intergenic | 15.0% |
| !!! | AGTTAAGATTTATTTTGAAA+AGG | - | Chr8:66289-66308 | MsG0880041837.01.T01:CDS | 15.0% |
| !!! | CAAATACTATTTCAAAATTT+TGG | + | Chr8:68010-68029 | None:intergenic | 15.0% |
| !!! | TATAAACTTGATAATCATAA+AGG | - | Chr8:68655-68674 | MsG0880041837.01.T01:intron | 15.0% |
| !! | AGATTTATATCTGAAGAAAT+TGG | - | Chr8:66394-66413 | MsG0880041837.01.T01:CDS | 20.0% |
| !! | ATTTGAGAGTTAATTATCAA+TGG | - | Chr8:68113-68132 | MsG0880041837.01.T01:intron | 20.0% |
| !! | TCTAAATACTCATCTAAATT+AGG | - | Chr8:67404-67423 | MsG0880041837.01.T01:intron | 20.0% |
| !! | TCTCAATACTAGTATATATA+TGG | + | Chr8:68693-68712 | None:intergenic | 20.0% |
| !!! | ATACTATTTCAAAATTTTGG+TGG | + | Chr8:68007-68026 | None:intergenic | 20.0% |
| !!! | ATTTAGAGTTAATTTGTGAA+GGG | + | Chr8:67391-67410 | None:intergenic | 20.0% |
| !!! | ATTTTCTAGTAAAATGAGAT+TGG | - | Chr8:67873-67892 | MsG0880041837.01.T01:CDS | 20.0% |
| !!! | TAGTTTAGGTTGAATTAAAA+AGG | + | Chr8:67346-67365 | None:intergenic | 20.0% |
| !!! | TATTTAGAGTTAATTTGTGA+AGG | + | Chr8:67392-67411 | None:intergenic | 20.0% |
| !!! | TTTTGCTTAATTGCTTAATT+AGG | - | Chr8:67451-67470 | MsG0880041837.01.T01:intron | 20.0% |
| ! | AACTTGATTCTACTGTATTA+TGG | + | Chr8:68160-68179 | None:intergenic | 25.0% |
| ! | ACTAATTATTGTAACATCTC+AGG | - | Chr8:67598-67617 | MsG0880041837.01.T01:intron | 25.0% |
| ! | AGTGAACAAAAAATAACTTC+AGG | + | Chr8:68268-68287 | None:intergenic | 25.0% |
| ! | CATATATGTACACATTCAAT+TGG | - | Chr8:67962-67981 | MsG0880041837.01.T01:CDS | 25.0% |
| ! | GTAACTGTCAACAAATAAAA+TGG | + | Chr8:68416-68435 | None:intergenic | 25.0% |
| ! | TGTGTTTGATATTCAATTCA+AGG | - | Chr8:67930-67949 | MsG0880041837.01.T01:CDS | 25.0% |
| !! | GGATTTAATGTTTTTCGTTA+TGG | - | Chr8:66415-66434 | MsG0880041837.01.T01:CDS | 25.0% |
| !! | GTTTTACAACTCATATTCTA+TGG | - | Chr8:69360-69379 | MsG0880041837.01.T01:CDS | 25.0% |
| !! | TACGATAAATTTTCATGTTG+AGG | - | Chr8:66895-66914 | MsG0880041837.01.T01:intron | 25.0% |
| !! | TTGCAAGTTCATATTAGTTT+AGG | + | Chr8:67360-67379 | None:intergenic | 25.0% |
| !!! | AATAAAATGGTTTGCTCAAA+TGG | + | Chr8:68403-68422 | None:intergenic | 25.0% |
| !!! | ATAAAATGGTTTGCTCAAAT+GGG | + | Chr8:68402-68421 | None:intergenic | 25.0% |
| !!! | CTCTTTGAAATTTTATGATC+CGG | + | Chr8:69036-69055 | None:intergenic | 25.0% |
| !!! | GAAGTTATTTTTTGTTCACT+AGG | - | Chr8:68268-68287 | MsG0880041837.01.T01:intron | 25.0% |
| !!! | TAAAAAGGAAGTGACTTTTT+TGG | + | Chr8:67331-67350 | None:intergenic | 25.0% |
| !!! | TATTTTGAAAAGGAAGATGT+TGG | - | Chr8:66299-66318 | MsG0880041837.01.T01:CDS | 25.0% |
| !!! | TGATTCAATTTCGAGTTATA+AGG | - | Chr8:67131-67150 | MsG0880041837.01.T01:intron | 25.0% |
| AACAAAGATAGACAAAACCA+AGG | - | Chr8:67553-67572 | MsG0880041837.01.T01:intron | 30.0% | |
| AACAATGTAAAGCTCTTGTA+CGG | - | Chr8:66748-66767 | MsG0880041837.01.T01:intron | 30.0% | |
| AACATAGAATCATTCACATG+TGG | - | Chr8:68852-68871 | MsG0880041837.01.T01:intron | 30.0% | |
| ACACTTAATAATCTACAGAC+AGG | - | Chr8:69544-69563 | MsG0880041837.01.T01:CDS | 30.0% | |
| ACTTATATCTAAGTTCAGAG+AGG | + | Chr8:67730-67749 | None:intergenic | 30.0% | |
| AGGGAAACAATTATACAGAA+TGG | + | Chr8:68517-68536 | None:intergenic | 30.0% | |
| ATGTCTCTCTATTCTACTAT+TGG | - | Chr8:67702-67721 | MsG0880041837.01.T01:intron | 30.0% | |
| ATTGCTTAACTGATATTACG+TGG | + | Chr8:69252-69271 | None:intergenic | 30.0% | |
| ATTGGTATTCGTACTTTCAT+TGG | - | Chr8:67980-67999 | MsG0880041837.01.T01:CDS | 30.0% | |
| CAATTTCATATACTATTGCC+AGG | + | Chr8:68549-68568 | None:intergenic | 30.0% | |
| CATGTGAATGATTCTATGTT+TGG | + | Chr8:68852-68871 | None:intergenic | 30.0% | |
| CTGGCAATAGTATATGAAAT+TGG | - | Chr8:68547-68566 | MsG0880041837.01.T01:intron | 30.0% | |
| CTGTATAATTGTTTCCCTTA+AGG | - | Chr8:68519-68538 | MsG0880041837.01.T01:intron | 30.0% | |
| CTTATATCTAAGTTCAGAGA+GGG | + | Chr8:67729-67748 | None:intergenic | 30.0% | |
| GAACATAGTAGCATATTTCT+TGG | - | Chr8:68582-68601 | MsG0880041837.01.T01:intron | 30.0% | |
| GTATTTGCACAATGTATGAA+AGG | - | Chr8:67833-67852 | MsG0880041837.01.T01:intron | 30.0% | |
| GTCAAGAACTCAAGATTAAA+AGG | - | Chr8:69272-69291 | MsG0880041837.01.T01:intron | 30.0% | |
| TACAACTCATATTCTATGGT+TGG | - | Chr8:69364-69383 | MsG0880041837.01.T01:CDS | 30.0% | |
| TATCTTATTCACATATGAGC+TGG | - | Chr8:67763-67782 | MsG0880041837.01.T01:intron | 30.0% | |
| TTGATGCACAACAATAATGT+AGG | + | Chr8:68764-68783 | None:intergenic | 30.0% | |
| TTGGTATTCGTACTTTCATT+GGG | - | Chr8:67981-68000 | MsG0880041837.01.T01:CDS | 30.0% | |
| ! | AATACAGTAGAATCAAGTTG+TGG | - | Chr8:68161-68180 | MsG0880041837.01.T01:intron | 30.0% |
| ! | ATTTCTTGGTAAAGCATCTT+TGG | - | Chr8:68596-68615 | MsG0880041837.01.T01:intron | 30.0% |
| ! | TCATATTCTATGGTTGGTAT+TGG | - | Chr8:69370-69389 | MsG0880041837.01.T01:CDS | 30.0% |
| ! | TGCACATCATAATTTTGTTG+AGG | - | Chr8:67027-67046 | MsG0880041837.01.T01:intron | 30.0% |
| !! | AAGAGAGAATTTTGAGAAAG+CGG | - | Chr8:66177-66196 | MsG0880041837.01.T01:CDS | 30.0% |
| !! | TAAAATGGTTTGCTCAAATG+GGG | + | Chr8:68401-68420 | None:intergenic | 30.0% |
| !! | TATGAAGATGAATTTTCGAG+TGG | + | Chr8:65883-65902 | None:intergenic | 30.0% |
| !! | TTATTTTGTCACTACATGGT+TGG | - | Chr8:69059-69078 | MsG0880041837.01.T01:intron | 30.0% |
| !!! | GACTTTATTTTGTCACTACA+TGG | - | Chr8:69055-69074 | MsG0880041837.01.T01:intron | 30.0% |
| !!! | TATTTTTTGTTCACTAGGTG+TGG | - | Chr8:68273-68292 | MsG0880041837.01.T01:intron | 30.0% |
| AAAGGTGAAGATGAAGCATA+AGG | - | Chr8:66129-66148 | MsG0880041837.01.T01:CDS | 35.0% | |
| AACACTAAAACACCTAAAGC+AGG | + | Chr8:66940-66959 | None:intergenic | 35.0% | |
| AACATTGTACAGCAAGTTTG+TGG | - | Chr8:68908-68927 | MsG0880041837.01.T01:CDS | 35.0% | |
| ACAATGTAAAGCTCTTGTAC+GGG | - | Chr8:66749-66768 | MsG0880041837.01.T01:intron | 35.0% | |
| AGAACTAGATCGATTGGAAA+CGG | - | Chr8:65943-65962 | MsG0880041837.01.T01:CDS | 35.0% | |
| ATGGGAAAACAAACTCTTTC+AGG | - | Chr8:66644-66663 | MsG0880041837.01.T01:CDS | 35.0% | |
| CAAAAGGAAAATGCATCAGA+TGG | + | Chr8:69151-69170 | None:intergenic | 35.0% | |
| CAGTGAGTTAAGCAAAATCA+CGG | + | Chr8:67090-67109 | None:intergenic | 35.0% | |
| CTACTGTATTATGGCAATAC+AGG | + | Chr8:68151-68170 | None:intergenic | 35.0% | |
| CTTGTGAACCAATCATCAAA+AGG | - | Chr8:68932-68951 | MsG0880041837.01.T01:CDS | 35.0% | |
| TAGTGACTGTAACCTTGTTA+TGG | + | Chr8:67582-67601 | None:intergenic | 35.0% | |
| TAGTTTCCATCCATCACAAA+AGG | + | Chr8:69167-69186 | None:intergenic | 35.0% | |
| TATAAGGAATGAGTCGAGTA+GGG | - | Chr8:67147-67166 | MsG0880041837.01.T01:intron | 35.0% | |
| TCAGAATCACAAGACTGAAA+CGG | - | Chr8:65916-65935 | MsG0880041837.01.T01:CDS | 35.0% | |
| TGGAATAATTCCAAACTCTG+TGG | - | Chr8:69390-69409 | MsG0880041837.01.T01:CDS | 35.0% | |
| TTATAAGGAATGAGTCGAGT+AGG | - | Chr8:67146-67165 | MsG0880041837.01.T01:intron | 35.0% | |
| TTGCTTAATTAGGCTAGAGA+AGG | - | Chr8:67461-67480 | MsG0880041837.01.T01:intron | 35.0% | |
| ! | ATCACAGAATCAGTCACTTT+CGG | - | Chr8:66829-66848 | MsG0880041837.01.T01:intron | 35.0% |
| ! | GATGCATTTTCCTTTTGTGA+TGG | - | Chr8:69154-69173 | MsG0880041837.01.T01:intron | 35.0% |
| ! | TGAAAAGTTGAAGCATTCGA+AGG | - | Chr8:69498-69517 | MsG0880041837.01.T01:CDS | 35.0% |
| ! | TTCCTGACTTTGTTGACTAA+TGG | + | Chr8:67900-67919 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTCATTGTTGAC+TGG | + | Chr8:69103-69122 | None:intergenic | 35.0% |
| ! | TTTTTCCGATGACTTCAAAC+CGG | + | Chr8:66047-66066 | None:intergenic | 35.0% |
| !! | CATTTTCCTTTTGTGATGGA+TGG | - | Chr8:69158-69177 | MsG0880041837.01.T01:intron | 35.0% |
| !! | CTTGGCATTCAAGTTTTATC+CGG | - | Chr8:69014-69033 | MsG0880041837.01.T01:intron | 35.0% |
| !! | CTTTTGATGATTGGTTCACA+AGG | + | Chr8:68934-68953 | None:intergenic | 35.0% |
| !! | TTGAGTGACCTTTTGATGAT+TGG | + | Chr8:68943-68962 | None:intergenic | 35.0% |
| !!! | CCAATTTTTTCTCAGCAAGA+GGG | + | Chr8:69447-69466 | None:intergenic | 35.0% |
| !!! | TCCAATTTTTTCTCAGCAAG+AGG | + | Chr8:69448-69467 | None:intergenic | 35.0% |
| AAACCAAGGCTACCATAACA+AGG | - | Chr8:67567-67586 | MsG0880041837.01.T01:intron | 40.0% | |
| AACATCCGAATCACACAAAC+AGG | - | Chr8:68961-68980 | MsG0880041837.01.T01:CDS | 40.0% | |
| AACCGGTATTTAACTGCCAA+TGG | + | Chr8:66555-66574 | None:intergenic | 40.0% | |
| AGTTGCCTGTTTGTGTGATT+CGG | + | Chr8:68969-68988 | None:intergenic | 40.0% | |
| ATCGGAGATGTTGAGATAGT+AGG | - | Chr8:66219-66238 | MsG0880041837.01.T01:CDS | 40.0% | |
| CAAACTCTTTCAGGAAGTGA+AGG | - | Chr8:66653-66672 | MsG0880041837.01.T01:CDS | 40.0% | |
| CACCATTGGCAGTTAAATAC+CGG | - | Chr8:66550-66569 | MsG0880041837.01.T01:CDS | 40.0% | |
| CAGCAGCATTAGCAACAAAA+TGG | - | Chr8:69123-69142 | MsG0880041837.01.T01:intron | 40.0% | |
| CATGCTAATCAAACCACGTT+TGG | + | Chr8:67216-67235 | None:intergenic | 40.0% | |
| CCAAACTCTGTGGAAGATAT+TGG | - | Chr8:69400-69419 | MsG0880041837.01.T01:CDS | 40.0% | |
| CCAATATCTTCCACAGAGTT+TGG | + | Chr8:69403-69422 | None:intergenic | 40.0% | |
| CCCTCTTGCTGAGAAAAAAT+TGG | - | Chr8:69444-69463 | MsG0880041837.01.T01:CDS | 40.0% | |
| CGTGGTTTGATTAGCATGTT+TGG | - | Chr8:67218-67237 | MsG0880041837.01.T01:intron | 40.0% | |
| CTTAACTCACTGCGAAACAA+GGG | - | Chr8:67098-67117 | MsG0880041837.01.T01:intron | 40.0% | |
| GAAAACTGACACTGCTTACA+AGG | - | Chr8:69294-69313 | MsG0880041837.01.T01:intron | 40.0% | |
| GAAGTCATCGGAAAAATCAC+CGG | - | Chr8:66051-66070 | MsG0880041837.01.T01:CDS | 40.0% | |
| GACCATTAGTCAACAAAGTC+AGG | - | Chr8:67895-67914 | MsG0880041837.01.T01:CDS | 40.0% | |
| GATAGAGATGAAGTTATCGC+CGG | - | Chr8:66025-66044 | MsG0880041837.01.T01:CDS | 40.0% | |
| GGAACAAGAACTAGATCGAT+TGG | - | Chr8:65937-65956 | MsG0880041837.01.T01:CDS | 40.0% | |
| GTCAACAAAGTCAGGAACTT+AGG | - | Chr8:67903-67922 | MsG0880041837.01.T01:CDS | 40.0% | |
| GTGTGAAGATTGAGCATGAA+AGG | - | Chr8:67483-67502 | MsG0880041837.01.T01:intron | 40.0% | |
| TCGGAGATGTTGAGATAGTA+GGG | - | Chr8:66220-66239 | MsG0880041837.01.T01:CDS | 40.0% | |
| TCTGTGGAAGATATTGGACA+AGG | - | Chr8:69406-69425 | MsG0880041837.01.T01:CDS | 40.0% | |
| ! | CTGATGATGTTTCCTGCTTT+AGG | - | Chr8:66925-66944 | MsG0880041837.01.T01:intron | 40.0% |
| ! | TAACCTTGTTATGGTAGCCT+TGG | + | Chr8:67573-67592 | None:intergenic | 40.0% |
| ! | TATTGCCAGGTTGACCTTAA+GGG | + | Chr8:68536-68555 | None:intergenic | 40.0% |
| !! | AAATCACCGGAATTTGTTGC+CGG | - | Chr8:66064-66083 | MsG0880041837.01.T01:CDS | 40.0% |
| !! | AGAGAATTTTGAGAAAGCGG+CGG | - | Chr8:66180-66199 | MsG0880041837.01.T01:CDS | 40.0% |
| !! | AGCTTGTTGAGCTTTGTCAT+GGG | - | Chr8:67678-67697 | MsG0880041837.01.T01:intron | 40.0% |
| !! | CAATGTTGCTTTGCGTTTCA+TGG | + | Chr8:68895-68914 | None:intergenic | 40.0% |
| !! | GTTAAATACCGGTTTGATGC+CGG | - | Chr8:66561-66580 | MsG0880041837.01.T01:CDS | 40.0% |
| !! | TGTTGGCTTATGAGAAAGTG+CGG | - | Chr8:66316-66335 | MsG0880041837.01.T01:CDS | 40.0% |
| AAGAACCTGACTGATCCAGT+TGG | + | Chr8:66246-66265 | None:intergenic | 45.0% | |
| AATCTACAGACAGGTTTGCC+TGG | - | Chr8:69553-69572 | MsG0880041837.01.T01:CDS | 45.0% | |
| ACGTTCAAATGCACCAAACG+TGG | - | Chr8:67200-67219 | MsG0880041837.01.T01:intron | 45.0% | |
| AGAGTCCCTAAGACCATTGA+TGG | + | Chr8:67645-67664 | None:intergenic | 45.0% | |
| AGGGTGAGTGGATGGATAAT+AGG | - | Chr8:67166-67185 | MsG0880041837.01.T01:intron | 45.0% | |
| AGGTTTGCCTGGAATGTTTC+AGG | - | Chr8:69564-69583 | MsG0880041837.01.T01:CDS | 45.0% | |
| ATTAACCGTCATTGCTGCAC+AGG | + | Chr8:68717-68736 | None:intergenic | 45.0% | |
| CACTAGGTGTGGTGTATGAA+TGG | - | Chr8:68284-68303 | MsG0880041837.01.T01:intron | 45.0% | |
| CAGCGAGTTCTGCGAAATTA+CGG | - | Chr8:68312-68331 | MsG0880041837.01.T01:intron | 45.0% | |
| CGAGGAGGTGAATGAAGAAA+AGG | - | Chr8:66111-66130 | MsG0880041837.01.T01:CDS | 45.0% | |
| CGGTATTTAACTGCCAATGG+TGG | + | Chr8:66552-66571 | None:intergenic | 45.0% | |
| CTGCAGAGTGAAGAATGCAA+GGG | - | Chr8:67518-67537 | MsG0880041837.01.T01:intron | 45.0% | |
| GAGCAACACTGAGTCTGAAT+TGG | + | Chr8:68053-68072 | None:intergenic | 45.0% | |
| GCAGGAAACATCATCAGCAA+AGG | + | Chr8:66922-66941 | None:intergenic | 45.0% | |
| GCTTAACTCACTGCGAAACA+AGG | - | Chr8:67097-67116 | MsG0880041837.01.T01:intron | 45.0% | |
| GGAAGATATTGGACAAGGCT+TGG | - | Chr8:69411-69430 | MsG0880041837.01.T01:CDS | 45.0% | |
| GGATCAGTCAGGTTCTTGAT+CGG | - | Chr8:66249-66268 | MsG0880041837.01.T01:CDS | 45.0% | |
| GTCAATGCCTGAAACATTCC+AGG | + | Chr8:69574-69593 | None:intergenic | 45.0% | |
| TAGAATCAGCTCTGTCAGCT+TGG | - | Chr8:68996-69015 | MsG0880041837.01.T01:intron | 45.0% | |
| TCTGCAGAGTGAAGAATGCA+AGG | - | Chr8:67517-67536 | MsG0880041837.01.T01:intron | 45.0% | |
| TCTTGTACGGGTAGTGTAGT+GGG | - | Chr8:66761-66780 | MsG0880041837.01.T01:intron | 45.0% | |
| TGACAAAGCTCAACAAGCTG+AGG | + | Chr8:67677-67696 | None:intergenic | 45.0% | |
| TGAGCAAAGTGAGCTCAACT+TGG | - | Chr8:66517-66536 | MsG0880041837.01.T01:CDS | 45.0% | |
| TGCTTTGCGTTTCATGGTAC+TGG | + | Chr8:68889-68908 | None:intergenic | 45.0% | |
| TGTGCAGCAATGACGGTTAA+TGG | - | Chr8:68716-68735 | MsG0880041837.01.T01:intron | 45.0% | |
| TGTTTCCCTTAAGGTCAACC+TGG | - | Chr8:68528-68547 | MsG0880041837.01.T01:intron | 45.0% | |
| ! | AGCTGCCATCAATGGTCTTA+GGG | - | Chr8:67637-67656 | MsG0880041837.01.T01:intron | 45.0% |
| ! | CTATTGCCAGGTTGACCTTA+AGG | + | Chr8:68537-68556 | None:intergenic | 45.0% |
| ! | GAAGCATTCGAAGGCTATTG+AGG | - | Chr8:69507-69526 | MsG0880041837.01.T01:CDS | 45.0% |
| ! | GTTGGCTTATGAGAAAGTGC+GGG | - | Chr8:66317-66336 | MsG0880041837.01.T01:CDS | 45.0% |
| ! | TGTTTTCCCATGCCAAAAGC+CGG | + | Chr8:66635-66654 | None:intergenic | 45.0% |
| !! | CAGCTTGTTGAGCTTTGTCA+TGG | - | Chr8:67677-67696 | MsG0880041837.01.T01:intron | 45.0% |
| !! | TATCGCCGGTTTGAAGTCAT+CGG | - | Chr8:66039-66058 | MsG0880041837.01.T01:CDS | 45.0% |
| !! | TTTGATGCCGGTTCACTTGA+AGG | - | Chr8:66573-66592 | MsG0880041837.01.T01:CDS | 45.0% |
| !! | TTTAATCATATATTTAAATT+GGG | - | Chr8:67806-67825 | MsG0880041837.01.T01:intron | 5.0% |
| !!! | TTTTAATCATATATTTAAAT+TGG | - | Chr8:67805-67824 | MsG0880041837.01.T01:intron | 5.0% |
| AAACGGAACGTGAGGAGGTT+CGG | - | Chr8:65960-65979 | MsG0880041837.01.T01:CDS | 50.0% | |
| AAAGAGCCTCTGCTCCACTT+TGG | - | Chr8:66608-66627 | MsG0880041837.01.T01:CDS | 50.0% | |
| AAAGTGGAGCAGAGGCTCTT+TGG | + | Chr8:66609-66628 | None:intergenic | 50.0% | |
| AATGAGTCGAGTAGGGTGAG+TGG | - | Chr8:67154-67173 | MsG0880041837.01.T01:intron | 50.0% | |
| ACTACCTCAGCTGCCATCAA+TGG | - | Chr8:67629-67648 | MsG0880041837.01.T01:intron | 50.0% | |
| ATTGGAAACGGAACGTGAGG+AGG | - | Chr8:65955-65974 | MsG0880041837.01.T01:CDS | 50.0% | |
| CAAGTGAACCGGCATCAAAC+CGG | + | Chr8:66572-66591 | None:intergenic | 50.0% | |
| CAGAGTGAAGAATGCAAGGG+AGG | - | Chr8:67521-67540 | MsG0880041837.01.T01:intron | 50.0% | |
| CAGCTGCCATCAATGGTCTT+AGG | - | Chr8:67636-67655 | MsG0880041837.01.T01:intron | 50.0% | |
| CATCTCCGATAACCGATCTC+CGG | + | Chr8:66209-66228 | None:intergenic | 50.0% | |
| CTCTTGTACGGGTAGTGTAG+TGG | - | Chr8:66760-66779 | MsG0880041837.01.T01:intron | 50.0% | |
| GAGAACCTGTGCAGCAATGA+CGG | - | Chr8:68709-68728 | MsG0880041837.01.T01:intron | 50.0% | |
| GTTGAGATAGTAGGGCCAAC+TGG | - | Chr8:66228-66247 | MsG0880041837.01.T01:CDS | 50.0% | |
| TCGATTGGAAACGGAACGTG+AGG | - | Chr8:65952-65971 | MsG0880041837.01.T01:CDS | 50.0% | |
| TTGGACCTCAAAGCCACCAT+TGG | - | Chr8:66536-66555 | MsG0880041837.01.T01:CDS | 50.0% | |
| ! | AACTGCCAATGGTGGCTTTG+AGG | + | Chr8:66544-66563 | None:intergenic | 50.0% |
| ! | AAGACCATTGATGGCAGCTG+AGG | + | Chr8:67636-67655 | None:intergenic | 50.0% |
| ! | AAGCGACAGTGTCTGGAACA+CGG | + | Chr8:69198-69217 | None:intergenic | 50.0% |
| ! | AGTGTCTGGAACACGGTCAA+GGG | + | Chr8:69191-69210 | None:intergenic | 50.0% |
| ! | TGTTCCAGACACTGTCGCTT+CGG | - | Chr8:69198-69217 | MsG0880041837.01.T01:intron | 50.0% |
| !! | AGGAGGTTCGGTGTAGTGAT+TGG | - | Chr8:65972-65991 | MsG0880041837.01.T01:CDS | 50.0% |
| !! | GAATTTTGAGAAAGCGGCGG+TGG | - | Chr8:66183-66202 | MsG0880041837.01.T01:CDS | 50.0% |
| !! | GGAGGTTCGGTGTAGTGATT+GGG | - | Chr8:65973-65992 | MsG0880041837.01.T01:CDS | 50.0% |
| !! | TTTGGACCGGCTTTTGGCAT+GGG | - | Chr8:66626-66645 | MsG0880041837.01.T01:CDS | 50.0% |
| ACCTCCTCGTCTTTCCTCAC+CGG | + | Chr8:66100-66119 | None:intergenic | 55.0% | |
| AGTCGAGTAGGGTGAGTGGA+TGG | - | Chr8:67158-67177 | MsG0880041837.01.T01:intron | 55.0% | |
| TAGGGCCAACTGGATCAGTC+AGG | - | Chr8:66238-66257 | MsG0880041837.01.T01:CDS | 55.0% | |
| TCACCGCCGGCAACAAATTC+CGG | + | Chr8:66073-66092 | None:intergenic | 55.0% | |
| TGCCAAAAGCCGGTCCAAAG+TGG | + | Chr8:66625-66644 | None:intergenic | 55.0% | |
| ! | CAGTGTCTGGAACACGGTCA+AGG | + | Chr8:69192-69211 | None:intergenic | 55.0% |
| ! | GTACGGGTAGTGTAGTGGGA+GGG | - | Chr8:66765-66784 | MsG0880041837.01.T01:intron | 55.0% |
| ! | TGTACGGGTAGTGTAGTGGG+AGG | - | Chr8:66764-66783 | MsG0880041837.01.T01:intron | 55.0% |
| !! | CTCCACTTTGGACCGGCTTT+TGG | - | Chr8:66620-66639 | MsG0880041837.01.T01:CDS | 55.0% |
| !! | CTTTGGACCGGCTTTTGGCA+TGG | - | Chr8:66625-66644 | MsG0880041837.01.T01:CDS | 55.0% |
| !! | GGTTCGGTGTAGTGATTGGG+AGG | - | Chr8:65976-65995 | MsG0880041837.01.T01:CDS | 55.0% |
| !! | TCACCGGAATTTGTTGCCGG+CGG | - | Chr8:66067-66086 | MsG0880041837.01.T01:CDS | 55.0% |
| !! | TGCCGGTTCACTTGAAGGAC+CGG | - | Chr8:66578-66597 | MsG0880041837.01.T01:CDS | 55.0% |
| GCCCGGTCCTTCAAGTGAAC+CGG | + | Chr8:66583-66602 | None:intergenic | 60.0% | |
| GCCTCTGCTCCACTTTGGAC+CGG | - | Chr8:66613-66632 | MsG0880041837.01.T01:CDS | 60.0% | |
| GCTTCCGAAGCGACAGTGTC+TGG | + | Chr8:69205-69224 | None:intergenic | 60.0% | |
| GGTGGCCGGAGATCGGTTAT+CGG | - | Chr8:66201-66220 | MsG0880041837.01.T01:CDS | 60.0% | |
| GGTTCACTTGAAGGACCGGG+CGG | - | Chr8:66582-66601 | MsG0880041837.01.T01:CDS | 60.0% | |
| GGTTCCGGTGAGGAAAGACG+AGG | - | Chr8:66093-66112 | MsG0880041837.01.T01:CDS | 60.0% | |
| TCCGGTGAGGAAAGACGAGG+AGG | - | Chr8:66096-66115 | MsG0880041837.01.T01:CDS | 60.0% | |
| TTTGAGAAAGCGGCGGTGGC+CGG | - | Chr8:66187-66206 | MsG0880041837.01.T01:CDS | 60.0% | |
| ! | GCCGGTTCACTTGAAGGACC+GGG | - | Chr8:66579-66598 | MsG0880041837.01.T01:CDS | 60.0% |
| !! | GGAATTTGTTGCCGGCGGTG+AGG | - | Chr8:66072-66091 | MsG0880041837.01.T01:CDS | 60.0% |
| CAGAGGCTCTTTGGACCGCC+CGG | + | Chr8:66600-66619 | None:intergenic | 65.0% | |
| GCCGGTCCAAAGTGGAGCAG+AGG | + | Chr8:66617-66636 | None:intergenic | 65.0% | |
| TGTTGCCGGCGGTGAGGTTC+CGG | - | Chr8:66078-66097 | MsG0880041837.01.T01:CDS | 65.0% | |
| AAGCGGCGGTGGCCGGAGAT+CGG | - | Chr8:66194-66213 | MsG0880041837.01.T01:CDS | 70.0% | |
| CCTCACCGGAACCTCACCGC+CGG | + | Chr8:66086-66105 | None:intergenic | 70.0% | |
| CCGGCGGTGAGGTTCCGGTG+AGG | - | Chr8:66083-66102 | MsG0880041837.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 65875 | 69660 | 65875 | ID=MsG0880041837.01;Name=MsG0880041837.01 |
| Chr8 | mRNA | 65875 | 69660 | 65875 | ID=MsG0880041837.01.T01;Parent=MsG0880041837.01;Name=MsG0880041837.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|4|0|507 |
| Chr8 | exon | 69320 | 69660 | 69320 | ID=MsG0880041837.01.T01:exon:230;Parent=MsG0880041837.01.T01 |
| Chr8 | exon | 68861 | 69014 | 68861 | ID=MsG0880041837.01.T01:exon:231;Parent=MsG0880041837.01.T01 |
| Chr8 | exon | 67836 | 68062 | 67836 | ID=MsG0880041837.01.T01:exon:232;Parent=MsG0880041837.01.T01 |
| Chr8 | exon | 65875 | 66676 | 65875 | ID=MsG0880041837.01.T01:exon:233;Parent=MsG0880041837.01.T01 |
| Chr8 | CDS | 69320 | 69660 | 69320 | ID=MsG0880041837.01.T01:cds;Parent=MsG0880041837.01.T01 |
| Chr8 | CDS | 68861 | 69014 | 68861 | ID=MsG0880041837.01.T01:cds;Parent=MsG0880041837.01.T01 |
| Chr8 | CDS | 67836 | 68062 | 67836 | ID=MsG0880041837.01.T01:cds;Parent=MsG0880041837.01.T01 |
| Chr8 | CDS | 65875 | 66676 | 65875 | ID=MsG0880041837.01.T01:cds;Parent=MsG0880041837.01.T01 |
| Gene Sequence |
| Protein sequence |
