AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001706.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001706.01.T01 MTR_1g041405 93.642 346 4 1 43 370 52 397 0.0 660
MsG0180001706.01.T01 MTR_1g041405 92.308 299 5 1 43 323 52 350 0.0 558
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001706.01.T01 AT5G18420 49.422 346 138 2 43 370 55 381 2.96e-116 345
MsG0180001706.01.T01 AT5G18420 49.422 346 138 2 43 370 55 381 3.52e-116 345
MsG0180001706.01.T01 AT5G18420 49.415 342 136 2 47 370 56 378 1.20e-114 341
MsG0180001706.01.T01 AT5G18420 44.482 299 129 2 43 323 55 334 1.15e-86 266

Find 111 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAATCTGTATCACAATT+TGG 0.161000 1:-25678930 None:intergenic
CACTGCTTCATCTTTATTTC+CGG 0.181836 1:-25679137 None:intergenic
CCCATTTCAGCAATTCCTTT+TGG 0.204315 1:+25680419 MsG0180001706.01.T01:intron
GAGAATTTCAACTGCAATTA+GGG 0.204802 1:-25680658 None:intergenic
TGAGAATTTCAACTGCAATT+AGG 0.207484 1:-25680659 None:intergenic
AGAATACCTCTTTGCCATTA+TGG 0.232758 1:-25678066 None:intergenic
TTAATATTCTTCAGCTAGTT+TGG 0.237509 1:+25679312 MsG0180001706.01.T01:intron
AAGGATTTGAAGCCGGATTC+TGG 0.267414 1:-25676939 None:intergenic
ATATGGCTTCTACTCTGTTT+TGG 0.272535 1:+25673178 MsG0180001706.01.T01:CDS
GGTATATTATGGATAAGATT+TGG 0.273288 1:+25673094 None:intergenic
GAGGATGTGGGTCAGTTTGA+TGG 0.280327 1:+25673117 MsG0180001706.01.T01:CDS
GAATACCTCTTTGCCATTAT+GGG 0.286279 1:-25678065 None:intergenic
ATGAATCTGTATCACAATTT+GGG 0.286687 1:-25678929 None:intergenic
TGGTAAACCCTTTCCATCTA+TGG 0.289008 1:+25679346 MsG0180001706.01.T01:CDS
ACACGTACCGGCAACTTTCT+TGG 0.293022 1:-25680486 None:intergenic
CTTTACAGTACTTGTCAATA+TGG 0.293533 1:+25680806 MsG0180001706.01.T01:CDS
TCTTTAAACAAATGATGATA+TGG 0.317716 1:-25678867 None:intergenic
GTATATTATGGATAAGATTT+GGG 0.328932 1:+25673095 None:intergenic
GCGTTTATTCTGCAACTATT+AGG 0.329631 1:+25678031 MsG0180001706.01.T01:CDS
ATGGAAAGGGTTTACCATTT+GGG 0.332603 1:-25679340 None:intergenic
ATAAGCTCGGGGTAGTCATT+AGG 0.333794 1:-25679398 None:intergenic
GATGGAAAGGGTTTACCATT+TGG 0.334749 1:-25679341 None:intergenic
TGAAAAGCGTTTACCATAGA+TGG 0.349790 1:-25679359 None:intergenic
TAGTCGGAAGGTGAGGGATA+TGG 0.384585 1:+25673161 MsG0180001706.01.T01:CDS
CCAAGTTTAGGCTGTGTTCC+AGG 0.390651 1:-25679112 None:intergenic
TAATATTCTTCAGCTAGTTT+GGG 0.392680 1:+25679313 MsG0180001706.01.T01:intron
GGATAAGATTTGGGAGGATG+TGG 0.395717 1:+25673104 MsG0180001706.01.T01:CDS
TAGATCCCTGGTTGGATGGC+TGG 0.396961 1:+25673202 MsG0180001706.01.T01:CDS
CCAAGGCTCCCGATACTTGA+TGG 0.408616 1:+25679223 MsG0180001706.01.T01:CDS
ATAATCACCTCTTGCTGTAC+AGG 0.414225 1:-25679506 None:intergenic
GGCTTATTCATCCCAGAATC+CGG 0.414456 1:+25676927 MsG0180001706.01.T01:CDS
TATCATCATTTGTTTAAAGA+TGG 0.424584 1:+25678870 MsG0180001706.01.T01:CDS
TAAGCTCGGGGTAGTCATTA+GGG 0.429964 1:-25679397 None:intergenic
CCACAGTGATATACAACCTT+TGG 0.432590 1:-25680456 None:intergenic
ATGACTACCCCGAGCTTATG+TGG 0.434285 1:+25679402 MsG0180001706.01.T01:CDS
CTAGTAGAGGGGCTGCAGTA+AGG 0.443465 1:+25679447 MsG0180001706.01.T01:CDS
AGGATTTGAAGCCGGATTCT+GGG 0.445204 1:-25676938 None:intergenic
TTATTTCCGGTGCCAAGTTT+AGG 0.450510 1:-25679124 None:intergenic
ACTGACTCCAAGAAAGTTGC+CGG 0.464679 1:+25680479 MsG0180001706.01.T01:CDS
CCTGGAACACAGCCTAAACT+TGG 0.467985 1:+25679112 MsG0180001706.01.T01:CDS
ATTCAATGGAAGTTGTGAAC+AGG 0.470837 1:+25680841 MsG0180001706.01.T01:CDS
GGACATGAGTCTACATTCAA+TGG 0.474092 1:+25680827 MsG0180001706.01.T01:CDS
TGGATAGATCCCTGGTTGGA+TGG 0.475386 1:+25673198 MsG0180001706.01.T01:CDS
TGGAAGGATTGAACCCTCAC+TGG 0.483292 1:+25679185 MsG0180001706.01.T01:CDS
CTTATTGTCAAATATTTCAC+TGG 0.488068 1:+25679165 MsG0180001706.01.T01:CDS
TGGGTCAGTTTGATGGAGGG+TGG 0.488401 1:+25673124 MsG0180001706.01.T01:CDS
TCAAGTATCGGGAGCCTTGG+TGG 0.495802 1:-25679220 None:intergenic
CTTATGAAAGGATTTGAAGC+CGG 0.499316 1:-25676946 None:intergenic
GGTGTTGATGTATCCCATAA+TGG 0.499372 1:+25678052 MsG0180001706.01.T01:CDS
AATAGGTTTGATCAGCGACC+TGG 0.508059 1:+25679094 MsG0180001706.01.T01:intron
GTTGGATGGCTGGCCTCTGA+AGG 0.508725 1:+25673212 MsG0180001706.01.T01:CDS
AGCGTTTACCATAGATGGAA+AGG 0.509198 1:-25679354 None:intergenic
TTTCTAAAACTAACCTTCAG+AGG 0.511437 1:-25673225 None:intergenic
GATGTGGGTCAGTTTGATGG+AGG 0.511599 1:+25673120 MsG0180001706.01.T01:CDS
ATCGGGAGCCTTGGTGGAAG+AGG 0.511773 1:-25679214 None:intergenic
TTACAGGCTTCCTGTCATGA+AGG 0.511927 1:+25677989 MsG0180001706.01.T01:intron
AATGCATACTCTGATATGTC+AGG 0.512674 1:-25680699 None:intergenic
TTGTCAAATATTTCACTGGA+AGG 0.512810 1:+25679169 MsG0180001706.01.T01:CDS
CAGAGGCCAGCCATCCAACC+AGG 0.512985 1:-25673208 None:intergenic
TAGTAGAGGGGCTGCAGTAA+GGG 0.513261 1:+25679448 MsG0180001706.01.T01:CDS
ATACCTCGCCATCAAGTATC+GGG 0.514225 1:-25679231 None:intergenic
TACAGGCTTCCTGTCATGAA+GGG 0.514425 1:+25677990 MsG0180001706.01.T01:intron
CTTAATTGCAAAAGCACAGA+AGG 0.515731 1:+25679472 MsG0180001706.01.T01:CDS
AGCAAACGCTATTAATCTCT+CGG 0.518427 1:-25676893 None:intergenic
CTAGTTTGGGTCAACCCAAA+TGG 0.519418 1:+25679326 MsG0180001706.01.T01:CDS
CCATCAAGTATCGGGAGCCT+TGG 0.519598 1:-25679223 None:intergenic
ATAATATTAGTCGGAAGGTG+AGG 0.520552 1:+25673154 MsG0180001706.01.T01:CDS
ACCATTGTCCCACATAAGCT+CGG 0.522735 1:-25679411 None:intergenic
GCGTTTACCATAGATGGAAA+GGG 0.523695 1:-25679353 None:intergenic
CCATTGTCCCACATAAGCTC+GGG 0.525577 1:-25679410 None:intergenic
CGCTATTAATCTCTCGGTGG+TGG 0.535789 1:-25676887 None:intergenic
AATACCTCGCCATCAAGTAT+CGG 0.543271 1:-25679232 None:intergenic
TTTATGATAAAGCTTATGAA+AGG 0.545065 1:-25676958 None:intergenic
GATCCCGTGCAAGCTCCAAA+AGG 0.558073 1:-25680434 None:intergenic
ATGTGGGTCAGTTTGATGGA+GGG 0.563267 1:+25673121 MsG0180001706.01.T01:CDS
GGAGCTTGCACGGGATCCAA+AGG 0.564350 1:+25680440 MsG0180001706.01.T01:CDS
AATAAATCATGTTACAGCAA+AGG 0.565375 1:-25680958 None:intergenic
TGCTTCAACTGATCTAGTGA+AGG 0.568307 1:-25678816 None:intergenic
AATAAAGATGAAGCAGTGGT+TGG 0.571459 1:+25679142 MsG0180001706.01.T01:CDS
GAGAGATAATATTAGTCGGA+AGG 0.577638 1:+25673149 MsG0180001706.01.T01:CDS
ATCATCCTGTGTGAACATCA+AGG 0.588770 1:+25680923 MsG0180001706.01.T01:CDS
GATAAGATTTGGGAGGATGT+GGG 0.591384 1:+25673105 MsG0180001706.01.T01:CDS
GGTTGAGAGATAATATTAGT+CGG 0.594150 1:+25673145 MsG0180001706.01.T01:CDS
TAATATTAGTCGGAAGGTGA+GGG 0.595015 1:+25673155 MsG0180001706.01.T01:CDS
TGAATCTGTATCACAATTTG+GGG 0.599720 1:-25678928 None:intergenic
TATTCTCTATCAGGAACTGG+TGG 0.600122 1:+25680626 MsG0180001706.01.T01:intron
ATGTGCGTTGATACTAGTAG+AGG 0.600614 1:+25679434 MsG0180001706.01.T01:CDS
AGCGTTTGCTCTGCTAGTTG+AGG 0.605843 1:+25676906 MsG0180001706.01.T01:CDS
TGACTACCCCGAGCTTATGT+GGG 0.608574 1:+25679403 MsG0180001706.01.T01:CDS
TCTTGCACCTGTACAGCAAG+AGG 0.609228 1:+25679499 MsG0180001706.01.T01:CDS
ACACAGCCTAAACTTGGCAC+CGG 0.610220 1:+25679118 MsG0180001706.01.T01:CDS
CCCGAGCTTATGTGGGACAA+TGG 0.613988 1:+25679410 MsG0180001706.01.T01:CDS
TGTGCGTTGATACTAGTAGA+GGG 0.616078 1:+25679435 MsG0180001706.01.T01:CDS
CGGAAATAAAGATGAAGCAG+TGG 0.618683 1:+25679138 MsG0180001706.01.T01:CDS
GCTTCAACTGATCTAGTGAA+GGG 0.620688 1:-25678815 None:intergenic
TATTATGGATAAGATTTGGG+AGG 0.628024 1:+25673098 None:intergenic
GCTCCCGATACTTGATGGCG+AGG 0.628235 1:+25679228 MsG0180001706.01.T01:CDS
TGTATCCCATAATGGCAAAG+AGG 0.640235 1:+25678060 MsG0180001706.01.T01:CDS
AGAATTTCAACTGCAATTAG+GGG 0.640657 1:-25680657 None:intergenic
GGATTAGACCTCTTCCACCA+AGG 0.651322 1:+25679206 MsG0180001706.01.T01:CDS
TACATGTGAATGAATTCTGA+CGG 0.655091 1:-25680885 None:intergenic
GAAGAGGTCTAATCCAGTGA+GGG 0.663114 1:-25679198 None:intergenic
AGAGGCCAGCCATCCAACCA+GGG 0.673157 1:-25673207 None:intergenic
TTAATTGCAAAAGCACAGAA+GGG 0.690057 1:+25679473 MsG0180001706.01.T01:CDS
GTGCGTTGATACTAGTAGAG+GGG 0.694698 1:+25679436 MsG0180001706.01.T01:CDS
GGAAGAGGTCTAATCCAGTG+AGG 0.700569 1:-25679199 None:intergenic
CATTGTCCCACATAAGCTCG+GGG 0.705703 1:-25679409 None:intergenic
AAGTACCTTGATGTTCACAC+AGG 0.718063 1:-25680928 None:intergenic
AAACGCTATTAATCTCTCGG+TGG 0.721558 1:-25676890 None:intergenic
CCAAAGGTTGTATATCACTG+TGG 0.722141 1:+25680456 MsG0180001706.01.T01:CDS
GAATCTGTATCACAATTTGG+GGG 0.804690 1:-25678927 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAATAAAAAAATTACT+TGG - Chr1:25680264-25680283 None:intergenic 10.0%
!! AATTCTAATTGTATAATTTA+AGG - Chr1:25677599-25677618 None:intergenic 10.0%
!! TAAATTATACAATTAGAATT+TGG + Chr1:25677599-25677618 MsG0180001706.01.T01:intron 10.0%
!!! TATTTTAAGTAATTGATTTT+GGG + Chr1:25680567-25680586 MsG0180001706.01.T01:intron 10.0%
!!! TGTTTAATTATTAGTTTATT+GGG + Chr1:25677015-25677034 MsG0180001706.01.T01:intron 10.0%
!!! TTGTTTAATTATTAGTTTAT+TGG + Chr1:25677014-25677033 MsG0180001706.01.T01:intron 10.0%
!! AAAAGTCATAAAATAATGTA+TGG - Chr1:25674834-25674853 None:intergenic 15.0%
!! AATTGATATTGTATCAATTT+AGG + Chr1:25675843-25675862 MsG0180001706.01.T01:intron 15.0%
!! ATTGATATTGTATCAATTTA+GGG + Chr1:25675844-25675863 MsG0180001706.01.T01:intron 15.0%
!! TGTAATAAACAATAAATGTT+AGG - Chr1:25679950-25679969 None:intergenic 15.0%
!!! AATTGATTTTGTATCAATTT+AGG + Chr1:25675570-25675589 MsG0180001706.01.T01:intron 15.0%
!!! AGTTTTAAATGTTGTTTAAT+TGG + Chr1:25676832-25676851 MsG0180001706.01.T01:intron 15.0%
!!! ATTGATTTTGTATCAATTTA+GGG + Chr1:25675571-25675590 MsG0180001706.01.T01:intron 15.0%
!!! ATTTTTTATTGGCTTTTATA+TGG - Chr1:25679648-25679667 None:intergenic 15.0%
!!! ATTTTTTTTTTCTTTTCAGT+TGG + Chr1:25680234-25680253 MsG0180001706.01.T01:intron 15.0%
!!! GTATTTTAAGTAATTGATTT+TGG + Chr1:25680566-25680585 MsG0180001706.01.T01:intron 15.0%
!!! TAACTTTATGGATTTTTTAT+TGG - Chr1:25679659-25679678 None:intergenic 15.0%
!!! TACAAATAATATAGTTTGTT+CGG + Chr1:25674544-25674563 MsG0180001706.01.T01:intron 15.0%
!!! TATGATTTTCAATTTTTCTA+GGG + Chr1:25675312-25675331 MsG0180001706.01.T01:intron 15.0%
!!! TATTTCTATTTGCTTATTTA+TGG + Chr1:25680774-25680793 MsG0180001706.01.T01:intron 15.0%
!!! TTACAATTTTGTTTAGTTAA+AGG + Chr1:25673520-25673539 MsG0180001706.01.T01:intron 15.0%
!!! TTATGATTTTCAATTTTTCT+AGG + Chr1:25675311-25675330 MsG0180001706.01.T01:intron 15.0%
!!! TTTGGTATTTTATTTTCAAT+TGG + Chr1:25673718-25673737 MsG0180001706.01.T01:intron 15.0%
!!! TTTTTTGTTAGAATCAATTA+TGG + Chr1:25676267-25676286 MsG0180001706.01.T01:intron 15.0%
!!! TTTTTTTTTTCTTTTCAGTT+GGG + Chr1:25680235-25680254 MsG0180001706.01.T01:intron 15.0%
!! AAAAAATTCACAAGTAACAA+AGG - Chr1:25673691-25673710 None:intergenic 20.0%
!! AAAAATTCACAAGTAACAAA+GGG - Chr1:25673690-25673709 None:intergenic 20.0%
!! AACCAGTTCTTTAAATTAAA+GGG + Chr1:25677071-25677090 MsG0180001706.01.T01:intron 20.0%
!! AAGCAAAAAAAGATTGATAA+AGG + Chr1:25678173-25678192 MsG0180001706.01.T01:intron 20.0%
!! AAGTGCAATAGATATATTAT+GGG - Chr1:25678735-25678754 None:intergenic 20.0%
!! AATAATGATGGTCTATTAAT+AGG + Chr1:25679077-25679096 MsG0180001706.01.T01:intron 20.0%
!! AATATTTATATGCATGTTGA+AGG - Chr1:25678464-25678483 None:intergenic 20.0%
!! AGTGAAAGATATGTTTAATA+TGG + Chr1:25673281-25673300 MsG0180001706.01.T01:intron 20.0%
!! CTCAGAATATATAGATATTA+TGG - Chr1:25678758-25678777 None:intergenic 20.0%
!! GAAGAAAAAAAAGAAAAGAT+GGG + Chr1:25677150-25677169 MsG0180001706.01.T01:intron 20.0%
!! GAATGTAAGTTACTTATATA+TGG + Chr1:25678690-25678709 MsG0180001706.01.T01:intron 20.0%
!! GTGAAAGATATGTTTAATAT+GGG + Chr1:25673282-25673301 MsG0180001706.01.T01:intron 20.0%
!! TATCATCATTTGTTTAAAGA+TGG + Chr1:25678870-25678889 MsG0180001706.01.T01:CDS 20.0%
!! TCTTTAAACAAATGATGATA+TGG - Chr1:25678870-25678889 None:intergenic 20.0%
!! TGAAAGATATGTTTAATATG+GGG + Chr1:25673283-25673302 MsG0180001706.01.T01:intron 20.0%
!! TGAAGAAAAAAAAGAAAAGA+TGG + Chr1:25677149-25677168 MsG0180001706.01.T01:intron 20.0%
!! TGTAAAATGAGATTATAAGA+TGG + Chr1:25680185-25680204 MsG0180001706.01.T01:intron 20.0%
!! TTTATGATAAAGCTTATGAA+AGG - Chr1:25676961-25676980 None:intergenic 20.0%
!!! AATATTTCAACTGATTTCAA+TGG - Chr1:25677199-25677218 None:intergenic 20.0%
!!! AATGGTAATTTTTTGTTTAC+AGG + Chr1:25677973-25677992 MsG0180001706.01.T01:intron 20.0%
!!! ACAATCAAGGTTTTAAATAA+AGG - Chr1:25676691-25676710 None:intergenic 20.0%
!!! ACATAGGCTATATTTAAAAT+TGG + Chr1:25676387-25676406 MsG0180001706.01.T01:intron 20.0%
!!! ACTCACTTTTAAGTAAAATA+AGG - Chr1:25676160-25676179 None:intergenic 20.0%
!!! ATTGATTCTAACAAAAAACT+AGG - Chr1:25676265-25676284 None:intergenic 20.0%
!!! ATTTTATAAGAAGCCAAATA+TGG - Chr1:25679835-25679854 None:intergenic 20.0%
!!! CGTTTGTTATAGTTTTTTTA+CGG - Chr1:25674760-25674779 None:intergenic 20.0%
!!! CTCACTTTTAAGTAAAATAA+GGG - Chr1:25676159-25676178 None:intergenic 20.0%
!!! GAATTGATTTGATAATTGTT+TGG + Chr1:25675532-25675551 MsG0180001706.01.T01:intron 20.0%
!!! GAATTGATTTGTTATATGTT+TGG + Chr1:25675805-25675824 MsG0180001706.01.T01:intron 20.0%
!!! GCTATATTTAAAATTGGTTA+TGG + Chr1:25676393-25676412 MsG0180001706.01.T01:intron 20.0%
!!! TAATATATTTGTGCTCATTT+TGG + Chr1:25674142-25674161 MsG0180001706.01.T01:intron 20.0%
!!! TATTTTATTTTCAATTGGCT+TGG + Chr1:25673723-25673742 MsG0180001706.01.T01:intron 20.0%
!!! TCTCGAAAAATAGATTTTTT+TGG + Chr1:25674369-25674388 MsG0180001706.01.T01:intron 20.0%
!!! TTATTTCAGCTTATTTTCAT+AGG - Chr1:25675762-25675781 None:intergenic 20.0%
!!! TTATTTTAATCCGTAACAAA+CGG - Chr1:25674421-25674440 None:intergenic 20.0%
!!! TTCCATTCTAAAATATGAAT+GGG - Chr1:25679035-25679054 None:intergenic 20.0%
!!! TTTCCATTCTAAAATATGAA+TGG - Chr1:25679036-25679055 None:intergenic 20.0%
!!! TTTGTTACTTGTGAATTTTT+TGG + Chr1:25673690-25673709 MsG0180001706.01.T01:intron 20.0%
!!! TTTTAAATATAGCCTATGTT+TGG - Chr1:25676386-25676405 None:intergenic 20.0%
! AAAAAAGATTGATAAAGGTG+TGG + Chr1:25678178-25678197 MsG0180001706.01.T01:intron 25.0%
! AAAAGAGGATAGCTTAATTA+AGG - Chr1:25678357-25678376 None:intergenic 25.0%
! AACAGATATACACAGAAATT+GGG - Chr1:25679607-25679626 None:intergenic 25.0%
! AAGAGAGAAAATATGTTTCA+GGG + Chr1:25674394-25674413 MsG0180001706.01.T01:intron 25.0%
! AAGTTAAAGAACTACAACAA+CGG - Chr1:25677870-25677889 None:intergenic 25.0%
! AATGTAAAGTCATTTATGTC+TGG + Chr1:25676182-25676201 MsG0180001706.01.T01:intron 25.0%
! ACCTAAATTACATACAATCA+AGG - Chr1:25676704-25676723 None:intergenic 25.0%
! ACCTTGATTGTATGTAATTT+AGG + Chr1:25676700-25676719 MsG0180001706.01.T01:intron 25.0%
! AGATTGACAAATTTGTACAT+AGG + Chr1:25678397-25678416 MsG0180001706.01.T01:intron 25.0%
! AGTGAGAAAAATTGAGTAAA+TGG + Chr1:25677735-25677754 MsG0180001706.01.T01:intron 25.0%
! ATAAGCACTACTAACATAAT+AGG - Chr1:25673461-25673480 None:intergenic 25.0%
! ATGAATCTGTATCACAATTT+GGG - Chr1:25678932-25678951 None:intergenic 25.0%
! ATGATTAGGTGATTTATCTT+TGG + Chr1:25676430-25676449 MsG0180001706.01.T01:intron 25.0%
! ATGGAAAATTGAAGATTATG+CGG + Chr1:25679049-25679068 MsG0180001706.01.T01:intron 25.0%
! ATTAGAAATACTCTGTTTGA+GGG + Chr1:25677473-25677492 MsG0180001706.01.T01:intron 25.0%
! ATTATTCAGTTTGGCAATTT+AGG + Chr1:25673783-25673802 MsG0180001706.01.T01:intron 25.0%
! CTTATTGTCAAATATTTCAC+TGG + Chr1:25679165-25679184 MsG0180001706.01.T01:CDS 25.0%
! GAACCAGTTCTTTAAATTAA+AGG + Chr1:25677070-25677089 MsG0180001706.01.T01:intron 25.0%
! GAAGTGCAATAGATATATTA+TGG - Chr1:25678736-25678755 None:intergenic 25.0%
! GCTTATAACAAACTGATAAA+TGG + Chr1:25673475-25673494 MsG0180001706.01.T01:intron 25.0%
! TAGTTAATAGCTCAACAAAA+TGG + Chr1:25677233-25677252 MsG0180001706.01.T01:intron 25.0%
! TCATTTGACAACTAACTTTA+TGG - Chr1:25679671-25679690 None:intergenic 25.0%
! TCTTATAAACTCAGTACATT+CGG - Chr1:25677651-25677670 None:intergenic 25.0%
! TGAAAAGTTATATTGTACCT+TGG + Chr1:25680347-25680366 MsG0180001706.01.T01:intron 25.0%
! TGAAAATCATAAATACCTGA+AGG - Chr1:25675303-25675322 None:intergenic 25.0%
! TGTATCAGTTATATCATACA+CGG + Chr1:25678495-25678514 MsG0180001706.01.T01:intron 25.0%
! TTAAATGTGTGTGTTATGTT+CGG - Chr1:25680129-25680148 None:intergenic 25.0%
! TTAATATTCTTCAGCTAGTT+TGG + Chr1:25679312-25679331 MsG0180001706.01.T01:intron 25.0%
! TTATTCAGTTTGGCAATTTA+GGG + Chr1:25673784-25673803 MsG0180001706.01.T01:intron 25.0%
! TTTGTTAGAATCAATTATGG+AGG + Chr1:25676270-25676289 MsG0180001706.01.T01:intron 25.0%
!! ACAAATGTGTTTCTATTGAA+CGG - Chr1:25677265-25677284 None:intergenic 25.0%
!! ATATGTTTTTCTTTTCTTGG+AGG + Chr1:25678610-25678629 MsG0180001706.01.T01:intron 25.0%
!! CAATCTAAAACAGAATTCAA+TGG - Chr1:25678212-25678231 None:intergenic 25.0%
!! CTGATATGTTTTTCTTTTCT+TGG + Chr1:25678607-25678626 MsG0180001706.01.T01:intron 25.0%
!! GTTCTTATTTATTCTCTATC+AGG + Chr1:25680617-25680636 MsG0180001706.01.T01:intron 25.0%
!! TAATATTCTTCAGCTAGTTT+GGG + Chr1:25679313-25679332 MsG0180001706.01.T01:intron 25.0%
!! TCAAATGTTTTATCTTCTAG+TGG + Chr1:25678574-25678593 MsG0180001706.01.T01:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - Chr1:25676576-25676595 None:intergenic 25.0%
!!! TGATTTTTGTTGTGTATGTT+TGG - Chr1:25676638-25676657 None:intergenic 25.0%
!!! TTAGTGAATGTTTTGTTATG+CGG + Chr1:25675488-25675507 MsG0180001706.01.T01:intron 25.0%
!!! TTATTTTAATCCGCAACAAA+CGG + Chr1:25674785-25674804 MsG0180001706.01.T01:intron 25.0%
!!! TTCCCATTCATATTTTAGAA+TGG + Chr1:25679030-25679049 MsG0180001706.01.T01:intron 25.0%
!!! TTGATAATTGTTTGGTTTTG+CGG + Chr1:25675540-25675559 MsG0180001706.01.T01:intron 25.0%
!!! TTGTTATATGTTTGGTTTTG+AGG + Chr1:25675813-25675832 MsG0180001706.01.T01:intron 25.0%
AAAATTGCAAAAACACGTAC+CGG - Chr1:25680501-25680520 None:intergenic 30.0%
AAACAAAATTGTAAGCAGTC+TGG - Chr1:25673514-25673533 None:intergenic 30.0%
AAATCATAAATACCTGAAGG+AGG - Chr1:25675300-25675319 None:intergenic 30.0%
AAGAAAGTCAAATCACCTTT+AGG - Chr1:25673837-25673856 None:intergenic 30.0%
AAGATATGTTTAATATGGGG+TGG + Chr1:25673286-25673305 MsG0180001706.01.T01:intron 30.0%
AAGTAACTTACATTCAGTGA+CGG - Chr1:25678685-25678704 None:intergenic 30.0%
AATCATTAATCTTGATGTCC+CGG + Chr1:25676653-25676672 MsG0180001706.01.T01:intron 30.0%
AATTTATCTATCCACTGAAC+AGG - Chr1:25678966-25678985 None:intergenic 30.0%
ACTTTGATTACCAATTATGG+AGG + Chr1:25673986-25674005 MsG0180001706.01.T01:intron 30.0%
AGAAAGTCAAATCACCTTTA+GGG - Chr1:25673836-25673855 None:intergenic 30.0%
AGAATTTCAACTGCAATTAG+GGG - Chr1:25680660-25680679 None:intergenic 30.0%
AGATATGTTTAATATGGGGT+GGG + Chr1:25673287-25673306 MsG0180001706.01.T01:intron 30.0%
AGTATGAGGGTAAATTCTTA+TGG - Chr1:25679719-25679738 None:intergenic 30.0%
ATAGAAACACATTTGTAGTG+TGG + Chr1:25677269-25677288 MsG0180001706.01.T01:intron 30.0%
ATTAACATCTTCGATATTGG+CGG - Chr1:25673665-25673684 None:intergenic 30.0%
ATTTATCTATCCACTGAACA+GGG - Chr1:25678965-25678984 None:intergenic 30.0%
ATTTATTCTCTATCAGGAAC+TGG + Chr1:25680623-25680642 MsG0180001706.01.T01:intron 30.0%
ATTTCTGTGTATATCTGTTG+AGG + Chr1:25679608-25679627 MsG0180001706.01.T01:intron 30.0%
CAACAGATATACACAGAAAT+TGG - Chr1:25679608-25679627 None:intergenic 30.0%
CAAGTGCTAATTATGATAAG+TGG + Chr1:25675904-25675923 MsG0180001706.01.T01:intron 30.0%
CAATCTAAACCAAAATCCAA+CGG - Chr1:25678383-25678402 None:intergenic 30.0%
CATTAGAAATACTCTGTTTG+AGG + Chr1:25677472-25677491 MsG0180001706.01.T01:intron 30.0%
CCAGAAACTTTACAAGTTTA+TGG + Chr1:25677684-25677703 MsG0180001706.01.T01:intron 30.0%
CCATAAACTTGTAAAGTTTC+TGG - Chr1:25677687-25677706 None:intergenic 30.0%
CGCTGTATATGTAGAAAAAA+GGG + Chr1:25679860-25679879 MsG0180001706.01.T01:intron 30.0%
CTATCTCCAATCAAATATAG+TGG - Chr1:25676814-25676833 None:intergenic 30.0%
CTTGTAGGTTATATGTGAAA+AGG + Chr1:25673915-25673934 MsG0180001706.01.T01:intron 30.0%
CTTTACAGTACTTGTCAATA+TGG + Chr1:25680806-25680825 MsG0180001706.01.T01:CDS 30.0%
GAAATCAAAACATACCACTT+CGG - Chr1:25674121-25674140 None:intergenic 30.0%
GAACATAACACACACATTTA+AGG + Chr1:25680128-25680147 MsG0180001706.01.T01:intron 30.0%
GAAGAGAGAAAATATGTTTC+AGG + Chr1:25674393-25674412 MsG0180001706.01.T01:intron 30.0%
GAAGATAGTCCAATTAAGAA+GGG + Chr1:25677757-25677776 MsG0180001706.01.T01:intron 30.0%
GAATTTAACTCATTCGTAGA+TGG - Chr1:25677566-25677585 None:intergenic 30.0%
GAGAATTTCAACTGCAATTA+GGG - Chr1:25680661-25680680 None:intergenic 30.0%
GATGAATCTGTATCACAATT+TGG - Chr1:25678933-25678952 None:intergenic 30.0%
GCAAAAACAAAGAACTTAAG+AGG - Chr1:25673551-25673570 None:intergenic 30.0%
GGTTGAGAGATAATATTAGT+CGG + Chr1:25673145-25673164 MsG0180001706.01.T01:CDS 30.0%
GTGATTAACATCTTCGATAT+TGG - Chr1:25673668-25673687 None:intergenic 30.0%
GTGGAACATATTATTCAGTT+TGG + Chr1:25673774-25673793 MsG0180001706.01.T01:intron 30.0%
GTTATTCTAAATGTGTGGTA+TGG - Chr1:25679798-25679817 None:intergenic 30.0%
GTTTCATACTACATTCTAAC+CGG - Chr1:25677323-25677342 None:intergenic 30.0%
TACATGTGAATGAATTCTGA+CGG - Chr1:25680888-25680907 None:intergenic 30.0%
TAGATTTGAGAAAAGAACCA+AGG - Chr1:25680367-25680386 None:intergenic 30.0%
TCATTGATCAAGTTAGTGTT+AGG + Chr1:25680528-25680547 MsG0180001706.01.T01:intron 30.0%
TCGACTTTGATTACCAATTA+TGG + Chr1:25673983-25674002 MsG0180001706.01.T01:intron 30.0%
TCGCTGTATATGTAGAAAAA+AGG + Chr1:25679859-25679878 MsG0180001706.01.T01:intron 30.0%
TCTAACTTGAAGCTAGAAAT+TGG - Chr1:25676523-25676542 None:intergenic 30.0%
TGAATCTGTATCACAATTTG+GGG - Chr1:25678931-25678950 None:intergenic 30.0%
TGAGAATTTCAACTGCAATT+AGG - Chr1:25680662-25680681 None:intergenic 30.0%
TGTCTGTTATTCTAAATGTG+TGG - Chr1:25679803-25679822 None:intergenic 30.0%
TTCATCAAATTATCCCTAGT+CGG - Chr1:25673598-25673617 None:intergenic 30.0%
TTGATGAAAAAGCAAGAGAA+AGG - Chr1:25678558-25678577 None:intergenic 30.0%
TTGTCAAATATTTCACTGGA+AGG + Chr1:25679169-25679188 MsG0180001706.01.T01:CDS 30.0%
TTGTCAAATGAACCAAATAG+TGG + Chr1:25679680-25679699 MsG0180001706.01.T01:intron 30.0%
TTTACTAGATCATGTTAAGC+TGG + Chr1:25677523-25677542 MsG0180001706.01.T01:intron 30.0%
TTTCTAATGTCAAAAACTCC+CGG - Chr1:25677461-25677480 None:intergenic 30.0%
TTTGCTTATGAATCAATCAG+AGG - Chr1:25680212-25680231 None:intergenic 30.0%
! AAAATAGAAGCACACATGAT+AGG - Chr1:25674043-25674062 None:intergenic 30.0%
! AAAGGTGATTTGACTTTCTT+TGG + Chr1:25673837-25673856 MsG0180001706.01.T01:intron 30.0%
! AATTGGAATCTTTTACATGC+AGG + Chr1:25676849-25676868 MsG0180001706.01.T01:intron 30.0%
! ACACCTCCATAATCAATTTT+GGG + Chr1:25676341-25676360 MsG0180001706.01.T01:intron 30.0%
! CTCCCTTTAATTTAAAGAAC+TGG - Chr1:25677076-25677095 None:intergenic 30.0%
! GTATCAATTTAGGGTTTGTT+TGG + Chr1:25675580-25675599 MsG0180001706.01.T01:intron 30.0%
! GTGTTGTTCATCTTGATATT+GGG + Chr1:25675421-25675440 MsG0180001706.01.T01:intron 30.0%
! TACACCGCTAAAATCAATTT+TGG + Chr1:25676595-25676614 MsG0180001706.01.T01:intron 30.0%
! TACACCTCCATAATCAATTT+TGG + Chr1:25676340-25676359 MsG0180001706.01.T01:intron 30.0%
! TCTAGCTTCAAGTTAGAATA+GGG + Chr1:25676526-25676545 MsG0180001706.01.T01:intron 30.0%
! TGATGGATGGCATTATTATT+AGG + Chr1:25678145-25678164 MsG0180001706.01.T01:intron 30.0%
! TGTGTTGTTCATCTTGATAT+TGG + Chr1:25675420-25675439 MsG0180001706.01.T01:intron 30.0%
! TGTTCTTTGTTGGTTAAACA+TGG + Chr1:25678423-25678442 MsG0180001706.01.T01:intron 30.0%
! TTAATTGCAAAAGCACAGAA+GGG + Chr1:25679473-25679492 MsG0180001706.01.T01:CDS 30.0%
! TTTGTCTCATTTGTTTGTTG+TGG + Chr1:25678307-25678326 MsG0180001706.01.T01:intron 30.0%
! TTTTACACAAACAAAGTTGC+AGG - Chr1:25680172-25680191 None:intergenic 30.0%
! TTTTGGCCACTATATTTGAT+TGG + Chr1:25676805-25676824 MsG0180001706.01.T01:intron 30.0%
!! ATAAGTTTTGTGAGACTCTT+TGG - Chr1:25676099-25676118 None:intergenic 30.0%
!! CTAAAAGTGAGTTGATGATT+AGG + Chr1:25676416-25676435 MsG0180001706.01.T01:intron 30.0%
!! GCTTCTATAATCTATTTCTG+CGG + Chr1:25677932-25677951 MsG0180001706.01.T01:intron 30.0%
!! GTACGTGTTTTTGCAATTTT+TGG + Chr1:25680501-25680520 MsG0180001706.01.T01:intron 30.0%
!! TATGCGGTTGATAATAATGA+TGG + Chr1:25679065-25679084 MsG0180001706.01.T01:intron 30.0%
!! TTCTAGCTTCAAGTTAGAAT+AGG + Chr1:25676525-25676544 MsG0180001706.01.T01:intron 30.0%
!! TTGTTGCATGTGTTTGTTTT+TGG + Chr1:25676788-25676807 MsG0180001706.01.T01:intron 30.0%
!! TTTCTAAAACTAACCTTCAG+AGG - Chr1:25673228-25673247 None:intergenic 30.0%
!! TTTCTTTGGCTTGGATTATT+TGG + Chr1:25673851-25673870 MsG0180001706.01.T01:intron 30.0%
!!! GTGAATTTTTTGGTAGACTT+TGG + Chr1:25673700-25673719 MsG0180001706.01.T01:intron 30.0%
!!! TTAAGTTCTTTGTTTTTGCG+TGG + Chr1:25673552-25673571 MsG0180001706.01.T01:intron 30.0%
AAAATCCAACGGCTAAAAAG+AGG - Chr1:25678372-25678391 None:intergenic 35.0%
AAAGTCCTAATCACGATAAG+CGG + Chr1:25675631-25675650 MsG0180001706.01.T01:intron 35.0%
AAATGAACCAAATAGTGGTG+TGG + Chr1:25679685-25679704 MsG0180001706.01.T01:intron 35.0%
AACATCAAACCCTAACTGAT+AGG - Chr1:25680595-25680614 None:intergenic 35.0%
AAGTAAAATAAGGGCCTGTT+AGG - Chr1:25676150-25676169 None:intergenic 35.0%
AATAAAGATGAAGCAGTGGT+TGG + Chr1:25679142-25679161 MsG0180001706.01.T01:CDS 35.0%
AATAACCGCTTATCGTGATT+AGG - Chr1:25675639-25675658 None:intergenic 35.0%
AATGCATACTCTGATATGTC+AGG - Chr1:25680702-25680721 None:intergenic 35.0%
ACATAGGATGTGTTCTTTGT+TGG + Chr1:25678413-25678432 MsG0180001706.01.T01:intron 35.0%
ACCATTAATCCGTAACAAAC+AGG + Chr1:25674808-25674827 MsG0180001706.01.T01:intron 35.0%
ACCTGAACTTTAAGTAACTG+CGG + Chr1:25677414-25677433 MsG0180001706.01.T01:intron 35.0%
ACTCATTTATAAGAGACTGC+TGG + Chr1:25678243-25678262 MsG0180001706.01.T01:intron 35.0%
ACTGAATAATATGTTCCACG+AGG - Chr1:25673773-25673792 None:intergenic 35.0%
ACTGCAGTTTCTTAAACAGT+CGG + Chr1:25678633-25678652 MsG0180001706.01.T01:intron 35.0%
AGAATACCTCTTTGCCATTA+TGG - Chr1:25678069-25678088 None:intergenic 35.0%
AGCAAACGCTATTAATCTCT+CGG - Chr1:25676896-25676915 None:intergenic 35.0%
AGGAGGATTTCAAATTGTGA+CGG - Chr1:25675094-25675113 None:intergenic 35.0%
ATAAATACCTGAAGGAGGAT+GGG - Chr1:25675295-25675314 None:intergenic 35.0%
ATAATATTAGTCGGAAGGTG+AGG + Chr1:25673154-25673173 MsG0180001706.01.T01:CDS 35.0%
ATACTCATCTTTGCGACTTA+GGG - Chr1:25675136-25675155 None:intergenic 35.0%
ATATGTTTAATATGGGGTGG+GGG + Chr1:25673289-25673308 MsG0180001706.01.T01:intron 35.0%
ATGGAAAGGGTTTACCATTT+GGG - Chr1:25679343-25679362 None:intergenic 35.0%
ATGTTAGGAGAAACAGATCA+TGG - Chr1:25679935-25679954 None:intergenic 35.0%
ATTCAATGGAAGTTGTGAAC+AGG + Chr1:25680841-25680860 MsG0180001706.01.T01:CDS 35.0%
ATTCATCACAACCATTAACG+GGG + Chr1:25679883-25679902 MsG0180001706.01.T01:intron 35.0%
CAAAAGGAATTGCTGAAATG+GGG - Chr1:25680421-25680440 None:intergenic 35.0%
CATCCATCATAAGTGATAAG+TGG - Chr1:25678134-25678153 None:intergenic 35.0%
CATTATGGCGTAGAAAGATT+TGG - Chr1:25680046-25680065 None:intergenic 35.0%
CCAAAAGGAATTGCTGAAAT+GGG - Chr1:25680422-25680441 None:intergenic 35.0%
CCAAAGACTACTTTGCTTTA+TGG - Chr1:25677812-25677831 None:intergenic 35.0%
CCAATTAAGAAGGGAGAAAA+AGG + Chr1:25677766-25677785 MsG0180001706.01.T01:intron 35.0%
CCATAAAGCAAAGTAGTCTT+TGG + Chr1:25677809-25677828 MsG0180001706.01.T01:intron 35.0%
CTTAAAATACCCTCTCATAC+TGG - Chr1:25680556-25680575 None:intergenic 35.0%
GAATACCTCTTTGCCATTAT+GGG - Chr1:25678068-25678087 None:intergenic 35.0%
GAATCTGTATCACAATTTGG+GGG - Chr1:25678930-25678949 None:intergenic 35.0%
GAGAGATAATATTAGTCGGA+AGG + Chr1:25673149-25673168 MsG0180001706.01.T01:CDS 35.0%
GATACAGATTCATCAGAGTA+TGG + Chr1:25678939-25678958 MsG0180001706.01.T01:intron 35.0%
GATATGCTGTACATATTCCT+TGG + Chr1:25680303-25680322 MsG0180001706.01.T01:intron 35.0%
GATATGTTTAATATGGGGTG+GGG + Chr1:25673288-25673307 MsG0180001706.01.T01:intron 35.0%
GATTCATCACAACCATTAAC+GGG + Chr1:25679882-25679901 MsG0180001706.01.T01:intron 35.0%
GCGTTTATTCTGCAACTATT+AGG + Chr1:25678031-25678050 MsG0180001706.01.T01:CDS 35.0%
GGAAGATAGTCCAATTAAGA+AGG + Chr1:25677756-25677775 MsG0180001706.01.T01:intron 35.0%
GGATTCATCACAACCATTAA+CGG + Chr1:25679881-25679900 MsG0180001706.01.T01:intron 35.0%
GGTAAGAACAGAAAGTGAAA+TGG - Chr1:25675270-25675289 None:intergenic 35.0%
GTTTATAAGAGTTTACGCTG+AGG + Chr1:25677661-25677680 MsG0180001706.01.T01:intron 35.0%
TAAAGTTCGAAACTCCCTAA+AGG + Chr1:25673819-25673838 MsG0180001706.01.T01:intron 35.0%
TAAGATCAAGCCTCCATAAT+TGG - Chr1:25673999-25674018 None:intergenic 35.0%
TAATATTAGTCGGAAGGTGA+GGG + Chr1:25673155-25673174 MsG0180001706.01.T01:CDS 35.0%
TACACAGAAATTGGGTATCT+TGG - Chr1:25679599-25679618 None:intergenic 35.0%
TAGTGACTGAGTATTAGCTA+AGG - Chr1:25680744-25680763 None:intergenic 35.0%
TATACTCATCTTTGCGACTT+AGG - Chr1:25675137-25675156 None:intergenic 35.0%
TCAAACAAGTCAATCCTAAC+AGG + Chr1:25676133-25676152 MsG0180001706.01.T01:intron 35.0%
TCCAAAAACAGTTTCTTCAC+AGG - Chr1:25677345-25677364 None:intergenic 35.0%
TCCAAAAGGAATTGCTGAAA+TGG - Chr1:25680423-25680442 None:intergenic 35.0%
TGAGCTAGCTGAAAATAAGT+TGG + Chr1:25673254-25673273 MsG0180001706.01.T01:intron 35.0%
TGATTTCAGTCTGAGTATGA+GGG - Chr1:25679732-25679751 None:intergenic 35.0%
TTAAATAAAGGTCGCCATGT+GGG - Chr1:25676679-25676698 None:intergenic 35.0%
TTTAAATAAAGGTCGCCATG+TGG - Chr1:25676680-25676699 None:intergenic 35.0%
! AAACGCCTTCTCAATTTTTG+TGG - Chr1:25678017-25678036 None:intergenic 35.0%
! AATGTATGGCCTGTTTGTTA+CGG - Chr1:25674820-25674839 None:intergenic 35.0%
! AATTTAGGTATCGTTGTGCT+GGG + Chr1:25676715-25676734 MsG0180001706.01.T01:intron 35.0%
! ACCTGTGAAGAAACTGTTTT+TGG + Chr1:25677341-25677360 MsG0180001706.01.T01:intron 35.0%
! AGGTTAAGCTTTAGCGATAT+TGG + Chr1:25673935-25673954 MsG0180001706.01.T01:intron 35.0%
! ATATGGCTTCTACTCTGTTT+TGG + Chr1:25673178-25673197 MsG0180001706.01.T01:CDS 35.0%
! CACTGCTTCATCTTTATTTC+CGG - Chr1:25679140-25679159 None:intergenic 35.0%
! CACTTATCACTTATGATGGA+TGG + Chr1:25678132-25678151 MsG0180001706.01.T01:intron 35.0%
! CCTTTTTCTCCCTTCTTAAT+TGG - Chr1:25677769-25677788 None:intergenic 35.0%
! CTCTTTGAAAAAGAAGAGAG+AGG + Chr1:25679564-25679583 MsG0180001706.01.T01:intron 35.0%
! CTTAATTGCAAAAGCACAGA+AGG + Chr1:25679472-25679491 MsG0180001706.01.T01:CDS 35.0%
! CTTATGAAAGGATTTGAAGC+CGG - Chr1:25676949-25676968 None:intergenic 35.0%
! CTTTTACATGCAGGACAATA+AGG + Chr1:25676858-25676877 MsG0180001706.01.T01:intron 35.0%
! GTTTCACGAATGATTGATTC+AGG - Chr1:25675114-25675133 None:intergenic 35.0%
! TAATTTAGGTATCGTTGTGC+TGG + Chr1:25676714-25676733 MsG0180001706.01.T01:intron 35.0%
! TGATTTGACTTTCTTTGGCT+TGG + Chr1:25673842-25673861 MsG0180001706.01.T01:intron 35.0%
! TTAAGCTTTAGCGATATTGG+TGG + Chr1:25673938-25673957 MsG0180001706.01.T01:intron 35.0%
! TTAAGGTACTTGTATCAGAG+AGG - Chr1:25678340-25678359 None:intergenic 35.0%
! TTGCCACTTATCACTTATGA+TGG + Chr1:25678128-25678147 MsG0180001706.01.T01:intron 35.0%
! TTTCAAATTGTGACGGAGTT+AGG - Chr1:25675087-25675106 None:intergenic 35.0%
!! CTCCATAATCAATTTTGGGT+GGG + Chr1:25676345-25676364 MsG0180001706.01.T01:intron 35.0%
!! GGAGCCAAAATTGATTTTAG+CGG - Chr1:25676602-25676621 None:intergenic 35.0%
!! TCTTTTTAGCCGTTGGATTT+TGG + Chr1:25678371-25678390 MsG0180001706.01.T01:intron 35.0%
!! TGAAAAGCGTTTACCATAGA+TGG - Chr1:25679362-25679381 None:intergenic 35.0%
!! TGTATGTTTGGTTCCACTTT+TGG - Chr1:25676626-25676645 None:intergenic 35.0%
!!! ATTTTGGGTTCCTATCAGTT+AGG + Chr1:25680582-25680601 MsG0180001706.01.T01:intron 35.0%
!!! TTTTGGGTTCCTATCAGTTA+GGG + Chr1:25680583-25680602 MsG0180001706.01.T01:intron 35.0%
AAACGCTATTAATCTCTCGG+TGG - Chr1:25676893-25676912 None:intergenic 40.0%
AACCATTAACGGGGAAATCA+AGG + Chr1:25679892-25679911 MsG0180001706.01.T01:intron 40.0%
AAGTACCTTGATGTTCACAC+AGG - Chr1:25680931-25680950 None:intergenic 40.0%
AATACCTCGCCATCAAGTAT+CGG - Chr1:25679235-25679254 None:intergenic 40.0%
ACCATTAACGGGGAAATCAA+GGG + Chr1:25679893-25679912 MsG0180001706.01.T01:intron 40.0%
ACTCAGACTGAAATCACCAA+AGG + Chr1:25679736-25679755 MsG0180001706.01.T01:intron 40.0%
AGCGTTTACCATAGATGGAA+AGG - Chr1:25679357-25679376 None:intergenic 40.0%
AGGGTCCACAAAAATTGAGA+AGG + Chr1:25678009-25678028 MsG0180001706.01.T01:CDS 40.0%
AGGTTGGAACAACAGATCAA+TGG + Chr1:25673410-25673429 MsG0180001706.01.T01:intron 40.0%
AGTTGTTTGCTTGTGAGGAA+GGG + Chr1:25673342-25673361 MsG0180001706.01.T01:intron 40.0%
ATACAGAGAGAAACTGCTGA+TGG + Chr1:25677366-25677385 MsG0180001706.01.T01:intron 40.0%
ATACTTAATTGCGTCCGACT+AGG + Chr1:25673581-25673600 MsG0180001706.01.T01:intron 40.0%
ATCAGGAAGGTTCTCTTAGA+TGG - Chr1:25677297-25677316 None:intergenic 40.0%
ATCATCCTGTGTGAACATCA+AGG + Chr1:25680923-25680942 MsG0180001706.01.T01:CDS 40.0%
ATCTAGTAAAAAGCCCAACC+AGG - Chr1:25677513-25677532 None:intergenic 40.0%
CAACAACGGCTGAATTTAGT+TGG - Chr1:25677856-25677875 None:intergenic 40.0%
CACCCACCCAAAATTGATTA+TGG - Chr1:25676350-25676369 None:intergenic 40.0%
CATAAATACCTGAAGGAGGA+TGG - Chr1:25675296-25675315 None:intergenic 40.0%
CCAAAGGTTGTATATCACTG+TGG + Chr1:25680456-25680475 MsG0180001706.01.T01:CDS 40.0%
CCACAGTGATATACAACCTT+TGG - Chr1:25680459-25680478 None:intergenic 40.0%
CCACCCAAAATTGATTATGG+AGG - Chr1:25676347-25676366 None:intergenic 40.0%
CGGAAATAAAGATGAAGCAG+TGG + Chr1:25679138-25679157 MsG0180001706.01.T01:CDS 40.0%
GACAAACAGTCTGCCATATT+TGG + Chr1:25679819-25679838 MsG0180001706.01.T01:intron 40.0%
GATAAGATTTGGGAGGATGT+GGG + Chr1:25673105-25673124 MsG0180001706.01.T01:CDS 40.0%
GATGGAAAGGGTTTACCATT+TGG - Chr1:25679344-25679363 None:intergenic 40.0%
GCAACAACAGTGTAAAACAC+AGG - Chr1:25678112-25678131 None:intergenic 40.0%
GCATGTTTCAATTTGAGCCA+AGG - Chr1:25680323-25680342 None:intergenic 40.0%
GCGTTTACCATAGATGGAAA+GGG - Chr1:25679356-25679375 None:intergenic 40.0%
GCTAAGGACAGAGATATATG+AGG - Chr1:25680728-25680747 None:intergenic 40.0%
GCTTCAACTGATCTAGTGAA+GGG - Chr1:25678818-25678837 None:intergenic 40.0%
GGACATGAGTCTACATTCAA+TGG + Chr1:25680827-25680846 MsG0180001706.01.T01:CDS 40.0%
GGAGTCATGTAAACTACCTT+TGG - Chr1:25679755-25679774 None:intergenic 40.0%
GGTTGGAACAACAGATCAAT+GGG + Chr1:25673411-25673430 MsG0180001706.01.T01:intron 40.0%
GTGATTTCAGTCTGAGTATG+AGG - Chr1:25679733-25679752 None:intergenic 40.0%
TAAATACCTGAAGGAGGATG+GGG - Chr1:25675294-25675313 None:intergenic 40.0%
TACTTAATTGCGTCCGACTA+GGG + Chr1:25673582-25673601 MsG0180001706.01.T01:intron 40.0%
TACTTATCTTCTCTGATGCC+AGG + Chr1:25678788-25678807 MsG0180001706.01.T01:intron 40.0%
TATTCTCTATCAGGAACTGG+TGG + Chr1:25680626-25680645 MsG0180001706.01.T01:intron 40.0%
TCTTCATTGTGTCTTCGTGA+AGG - Chr1:25677135-25677154 None:intergenic 40.0%
TGCAAAGTGCAACCAAACAT+AGG + Chr1:25676371-25676390 MsG0180001706.01.T01:intron 40.0%
TGCCAACTCATTGGTCATTA+TGG - Chr1:25680061-25680080 None:intergenic 40.0%
TGCTTCAACTGATCTAGTGA+AGG - Chr1:25678819-25678838 None:intergenic 40.0%
TGGTAAACCCTTTCCATCTA+TGG + Chr1:25679346-25679365 MsG0180001706.01.T01:CDS 40.0%
TGTATCCCATAATGGCAAAG+AGG + Chr1:25678060-25678079 MsG0180001706.01.T01:CDS 40.0%
TGTTACTGTTGACGAGACAA+TGG + Chr1:25677955-25677974 MsG0180001706.01.T01:intron 40.0%
TGTTAGGATCCAGTATGAGA+GGG + Chr1:25680544-25680563 MsG0180001706.01.T01:intron 40.0%
TTAAATTCGCGACATAAGCG+TGG + Chr1:25675014-25675033 MsG0180001706.01.T01:intron 40.0%
TTAAGCGTTATCCCACTTCA+AGG + Chr1:25680017-25680036 MsG0180001706.01.T01:intron 40.0%
! AAGCAAGAGAAAGGAAGCAT+AGG - Chr1:25678549-25678568 None:intergenic 40.0%
! AGCAAGAGAAAGGAAGCATA+GGG - Chr1:25678548-25678567 None:intergenic 40.0%
! ATAATCACCTCTTGCTGTAC+AGG - Chr1:25679509-25679528 None:intergenic 40.0%
! ATGTGCGTTGATACTAGTAG+AGG + Chr1:25679434-25679453 MsG0180001706.01.T01:CDS 40.0%
! CCCATTTCAGCAATTCCTTT+TGG + Chr1:25680419-25680438 MsG0180001706.01.T01:intron 40.0%
! CCTCCATAATCAATTTTGGG+TGG + Chr1:25676344-25676363 MsG0180001706.01.T01:intron 40.0%
! CTTGCATGTTTTTCATCGCA+AGG + Chr1:25673885-25673904 MsG0180001706.01.T01:intron 40.0%
! GATTAATGGTCCGTTTGTTG+CGG - Chr1:25674798-25674817 None:intergenic 40.0%
! GCCTGTTTGTTACGGATTAA+TGG - Chr1:25674812-25674831 None:intergenic 40.0%
! GGTTTCGATACGGCTTTTAA+TGG + Chr1:25673744-25673763 MsG0180001706.01.T01:intron 40.0%
! TAAACGCTTTTCAGCTAGCT+GGG + Chr1:25679369-25679388 MsG0180001706.01.T01:CDS 40.0%
! TACATTCTAACCGGTTCATC+AGG - Chr1:25677314-25677333 None:intergenic 40.0%
! TCACGAATGATTGATTCAGG+AGG - Chr1:25675111-25675130 None:intergenic 40.0%
! TCGCAAGGAGAATAACTTGT+AGG + Chr1:25673900-25673919 MsG0180001706.01.T01:intron 40.0%
! TCGTGTGAAAGTGAGTTGAA+CGG + Chr1:25676459-25676478 MsG0180001706.01.T01:intron 40.0%
! TGGGTTTTCCATAGATGGAT+GGG + Chr1:25676734-25676753 MsG0180001706.01.T01:intron 40.0%
! TGTGCGTTGATACTAGTAGA+GGG + Chr1:25679435-25679454 MsG0180001706.01.T01:CDS 40.0%
! TTATTTCCGGTGCCAAGTTT+AGG - Chr1:25679127-25679146 None:intergenic 40.0%
!! ATGTTTGGTTCCACTTTTGG+AGG - Chr1:25676623-25676642 None:intergenic 40.0%
!! CAATTGGCTTGGTTTCGATA+CGG + Chr1:25673734-25673753 MsG0180001706.01.T01:intron 40.0%
!! GGTGTTGATGTATCCCATAA+TGG + Chr1:25678052-25678071 MsG0180001706.01.T01:CDS 40.0%
!!! AATTCCTTTTGGAGCTTGCA+CGG + Chr1:25680430-25680449 MsG0180001706.01.T01:CDS 40.0%
!!! AATTTTGGCTCCTCCAAAAG+TGG + Chr1:25676610-25676629 MsG0180001706.01.T01:intron 40.0%
!!! AGTTCTTTGTTTTTGCGTGG+AGG + Chr1:25673555-25673574 MsG0180001706.01.T01:intron 40.0%
AAACATACCACTTCGGCACA+AGG - Chr1:25674114-25674133 None:intergenic 45.0%
AAAGTGAAATGGCGAGAGTG+AGG - Chr1:25675259-25675278 None:intergenic 45.0%
AAGATTTGGCTGCCTTGAAG+TGG - Chr1:25680032-25680051 None:intergenic 45.0%
AATAGGTTTGATCAGCGACC+TGG + Chr1:25679094-25679113 MsG0180001706.01.T01:intron 45.0%
ACCATTGTCCCACATAAGCT+CGG - Chr1:25679414-25679433 None:intergenic 45.0%
AGAGAACCTTCCTGATGAAC+CGG + Chr1:25677301-25677320 MsG0180001706.01.T01:intron 45.0%
AGATTTGGCTGCCTTGAAGT+GGG - Chr1:25680031-25680050 None:intergenic 45.0%
AGTGCAACCACACCACTATT+TGG - Chr1:25679695-25679714 None:intergenic 45.0%
AGTTGGCAGTAGAGCAGTAT+AGG + Chr1:25680073-25680092 MsG0180001706.01.T01:intron 45.0%
AGTTTACATGACTCCGTCTG+CGG + Chr1:25679760-25679779 MsG0180001706.01.T01:intron 45.0%
ATAAGCTCGGGGTAGTCATT+AGG - Chr1:25679401-25679420 None:intergenic 45.0%
ATACCTCGCCATCAAGTATC+GGG - Chr1:25679234-25679253 None:intergenic 45.0%
ATGTGGGTCAGTTTGATGGA+GGG + Chr1:25673121-25673140 MsG0180001706.01.T01:CDS 45.0%
CAGTTGTTTGCTTGTGAGGA+AGG + Chr1:25673341-25673360 MsG0180001706.01.T01:intron 45.0%
CCATTAACGGGGAAATCAAG+GGG + Chr1:25679894-25679913 MsG0180001706.01.T01:intron 45.0%
CGCCATAATGACCAATGAGT+TGG + Chr1:25680056-25680075 MsG0180001706.01.T01:intron 45.0%
CTAGTTTGGGTCAACCCAAA+TGG + Chr1:25679326-25679345 MsG0180001706.01.T01:CDS 45.0%
CTTTAAGTAACTGCGGCACA+TGG + Chr1:25677421-25677440 MsG0180001706.01.T01:intron 45.0%
GAAGAGGTCTAATCCAGTGA+GGG - Chr1:25679201-25679220 None:intergenic 45.0%
GCCGCAGTTACTTAAAGTTC+AGG - Chr1:25677418-25677437 None:intergenic 45.0%
GGATAAGATTTGGGAGGATG+TGG + Chr1:25673104-25673123 MsG0180001706.01.T01:CDS 45.0%
GGCTTATTCATCCCAGAATC+CGG + Chr1:25676927-25676946 MsG0180001706.01.T01:CDS 45.0%
GTGTTAGGATCCAGTATGAG+AGG + Chr1:25680543-25680562 MsG0180001706.01.T01:intron 45.0%
TAAGCTCGGGGTAGTCATTA+GGG - Chr1:25679400-25679419 None:intergenic 45.0%
TACAGGCTTCCTGTCATGAA+GGG + Chr1:25677990-25678009 MsG0180001706.01.T01:intron 45.0%
TAGGCAGTTGTTTGCTTGTG+AGG + Chr1:25673337-25673356 MsG0180001706.01.T01:intron 45.0%
TTACAGGCTTCCTGTCATGA+AGG + Chr1:25677989-25678008 MsG0180001706.01.T01:intron 45.0%
! AAACGCTTTTCAGCTAGCTG+GGG + Chr1:25679370-25679389 MsG0180001706.01.T01:CDS 45.0%
! AAGGATTTGAAGCCGGATTC+TGG - Chr1:25676942-25676961 None:intergenic 45.0%
! ACTGACTCCAAGAAAGTTGC+CGG + Chr1:25680479-25680498 MsG0180001706.01.T01:CDS 45.0%
! AGGATTTGAAGCCGGATTCT+GGG - Chr1:25676941-25676960 None:intergenic 45.0%
! CTGGGTTTTCCATAGATGGA+TGG + Chr1:25676733-25676752 MsG0180001706.01.T01:intron 45.0%
! GGGTTTTCCATAGATGGATG+GGG + Chr1:25676735-25676754 MsG0180001706.01.T01:intron 45.0%
! GTAAACGCTTTTCAGCTAGC+TGG + Chr1:25679368-25679387 MsG0180001706.01.T01:CDS 45.0%
! GTGCGTTGATACTAGTAGAG+GGG + Chr1:25679436-25679455 MsG0180001706.01.T01:CDS 45.0%
! GTTTCAGGGTCCGTTTGTTA+CGG + Chr1:25674408-25674427 MsG0180001706.01.T01:intron 45.0%
! TGTGCTGGGTTTTCCATAGA+TGG + Chr1:25676729-25676748 MsG0180001706.01.T01:intron 45.0%
! TTCTAACCGGTTCATCAGGA+AGG - Chr1:25677310-25677329 None:intergenic 45.0%
! TTTTGTGGACCCTTCATGAC+AGG - Chr1:25678002-25678021 None:intergenic 45.0%
!! ACTTCAGTGGTTTTGCAGGT+TGG + Chr1:25673394-25673413 MsG0180001706.01.T01:intron 45.0%
!! ATGGAGTAAGCATTGGAACC+GGG + Chr1:25677440-25677459 MsG0180001706.01.T01:intron 45.0%
!! CATGGAGTAAGCATTGGAAC+CGG + Chr1:25677439-25677458 MsG0180001706.01.T01:intron 45.0%
!! CTCTGTTTTGGATAGATCCC+TGG + Chr1:25673190-25673209 MsG0180001706.01.T01:CDS 45.0%
!! GCTAACTTCAGTGGTTTTGC+AGG + Chr1:25673390-25673409 MsG0180001706.01.T01:intron 45.0%
!! GCTATCCTCTTTTTAGCCGT+TGG + Chr1:25678364-25678383 MsG0180001706.01.T01:intron 45.0%
!! GTTTTGGATAGATCCCTGGT+TGG + Chr1:25673194-25673213 MsG0180001706.01.T01:CDS 45.0%
!! TGGTGGATTTGAATTCAGCG+AGG - Chr1:25675234-25675253 None:intergenic 45.0%
!!! ATTCCTTTTGGAGCTTGCAC+GGG + Chr1:25680431-25680450 MsG0180001706.01.T01:CDS 45.0%
!!! AATATTTTTTATTTTTATTG+AGG + Chr1:25679271-25679290 MsG0180001706.01.T01:intron 5.0%
!!! ATAAAAAATGATTTTTATTA+CGG - Chr1:25674525-25674544 None:intergenic 5.0%
!!! CAAAAATATAATTTTTTTAA+AGG - Chr1:25674638-25674657 None:intergenic 5.0%
ACACAGCCTAAACTTGGCAC+CGG + Chr1:25679118-25679137 MsG0180001706.01.T01:CDS 50.0%
ACGCAATCCCCATCCATCTA+TGG - Chr1:25676745-25676764 None:intergenic 50.0%
AGCGTTTGCTCTGCTAGTTG+AGG + Chr1:25676906-25676925 MsG0180001706.01.T01:CDS 50.0%
ATGACTACCCCGAGCTTATG+TGG + Chr1:25679402-25679421 MsG0180001706.01.T01:CDS 50.0%
ATGCTAGCAGCTAACGAGCA+AGG + Chr1:25673625-25673644 MsG0180001706.01.T01:intron 50.0%
ATGTGTGGTATGGTGTACCC+TGG - Chr1:25679788-25679807 None:intergenic 50.0%
CACAATTTGGGGGAACGTCT+GGG - Chr1:25678920-25678939 None:intergenic 50.0%
CATTGTCCCACATAAGCTCG+GGG - Chr1:25679412-25679431 None:intergenic 50.0%
CCAAGTTTAGGCTGTGTTCC+AGG - Chr1:25679115-25679134 None:intergenic 50.0%
CCATTGTCCCACATAAGCTC+GGG - Chr1:25679413-25679432 None:intergenic 50.0%
CCCCTTGATTTCCCCGTTAA+TGG - Chr1:25679897-25679916 None:intergenic 50.0%
CCTGGAACACAGCCTAAACT+TGG + Chr1:25679112-25679131 MsG0180001706.01.T01:CDS 50.0%
CGCTATTAATCTCTCGGTGG+TGG - Chr1:25676890-25676909 None:intergenic 50.0%
CTGCTCTACTGCCAACTCAT+TGG - Chr1:25680070-25680089 None:intergenic 50.0%
GAAATGGCGAGAGTGAGGAA+TGG - Chr1:25675254-25675273 None:intergenic 50.0%
GAGGATGTGGGTCAGTTTGA+TGG + Chr1:25673117-25673136 MsG0180001706.01.T01:CDS 50.0%
GATCTAGTGAAGGGAAGTCC+TGG - Chr1:25678809-25678828 None:intergenic 50.0%
GATGTGGGTCAGTTTGATGG+AGG + Chr1:25673120-25673139 MsG0180001706.01.T01:CDS 50.0%
GGAAGAGGTCTAATCCAGTG+AGG - Chr1:25679202-25679221 None:intergenic 50.0%
GGATTAGACCTCTTCCACCA+AGG + Chr1:25679206-25679225 MsG0180001706.01.T01:CDS 50.0%
GTTTGCTTGTGAGGAAGGGT+TGG + Chr1:25673346-25673365 MsG0180001706.01.T01:intron 50.0%
TAATATGGGGTGGGGGTGAA+TGG + Chr1:25673296-25673315 MsG0180001706.01.T01:intron 50.0%
TAGTACACCTTGTGCCGAAG+TGG + Chr1:25674104-25674123 MsG0180001706.01.T01:intron 50.0%
TAGTAGAGGGGCTGCAGTAA+GGG + Chr1:25679448-25679467 MsG0180001706.01.T01:CDS 50.0%
TAGTCGGAAGGTGAGGGATA+TGG + Chr1:25673161-25673180 MsG0180001706.01.T01:CDS 50.0%
TCACAATTTGGGGGAACGTC+TGG - Chr1:25678921-25678940 None:intergenic 50.0%
TCAGCGAGGATCTCATTGAG+AGG - Chr1:25675220-25675239 None:intergenic 50.0%
TCTGTTTGAGGGAATGTGCG+TGG + Chr1:25677484-25677503 MsG0180001706.01.T01:intron 50.0%
TCTTGCACCTGTACAGCAAG+AGG + Chr1:25679499-25679518 MsG0180001706.01.T01:CDS 50.0%
TGACTACCCCGAGCTTATGT+GGG + Chr1:25679403-25679422 MsG0180001706.01.T01:CDS 50.0%
TGGAAGGATTGAACCCTCAC+TGG + Chr1:25679185-25679204 MsG0180001706.01.T01:CDS 50.0%
TGGATAGATCCCTGGTTGGA+TGG + Chr1:25673198-25673217 MsG0180001706.01.T01:CDS 50.0%
TGTGTGGTATGGTGTACCCT+GGG - Chr1:25679787-25679806 None:intergenic 50.0%
! ACACGTACCGGCAACTTTCT+TGG - Chr1:25680489-25680508 None:intergenic 50.0%
! GATGGATGGGGATTGCGTTT+TGG + Chr1:25676747-25676766 MsG0180001706.01.T01:intron 50.0%
! GGCATCATGTGTTTTGCTGC+TGG + Chr1:25678516-25678535 MsG0180001706.01.T01:intron 50.0%
AATGTGCGTGGATGCCTGGT+TGG + Chr1:25677496-25677515 MsG0180001706.01.T01:intron 55.0%
ATAAAGGTCGCCATGTGGGC+CGG - Chr1:25676675-25676694 None:intergenic 55.0%
ATACCTGAAGGAGGATGGGG+AGG - Chr1:25675291-25675310 None:intergenic 55.0%
ATGGCGAGAGTGAGGAATGG+TGG - Chr1:25675251-25675270 None:intergenic 55.0%
ATGTGCGTGGATGCCTGGTT+GGG + Chr1:25677497-25677516 MsG0180001706.01.T01:intron 55.0%
CAGAGTATGGCCCTGTTCAG+TGG + Chr1:25678952-25678971 MsG0180001706.01.T01:intron 55.0%
CCAAGGCTCCCGATACTTGA+TGG + Chr1:25679223-25679242 MsG0180001706.01.T01:CDS 55.0%
CCCGAGCTTATGTGGGACAA+TGG + Chr1:25679410-25679429 MsG0180001706.01.T01:CDS 55.0%
CTAGTAGAGGGGCTGCAGTA+AGG + Chr1:25679447-25679466 MsG0180001706.01.T01:CDS 55.0%
GATCCCGTGCAAGCTCCAAA+AGG - Chr1:25680437-25680456 None:intergenic 55.0%
GCGGCACATGGAGTAAGCAT+TGG + Chr1:25677433-25677452 MsG0180001706.01.T01:intron 55.0%
TAGATCCCTGGTTGGATGGC+TGG + Chr1:25673202-25673221 MsG0180001706.01.T01:CDS 55.0%
TGAATGGTGAGGCGTGGAAG+TGG + Chr1:25673312-25673331 MsG0180001706.01.T01:intron 55.0%
TGGGTCAGTTTGATGGAGGG+TGG + Chr1:25673124-25673143 MsG0180001706.01.T01:CDS 55.0%
TGTGGAGCGGCTAACTTCAG+TGG + Chr1:25673381-25673400 MsG0180001706.01.T01:intron 55.0%
TTACCTCCCCATCCTCCTTC+AGG + Chr1:25675285-25675304 MsG0180001706.01.T01:intron 55.0%
! GGCTTTTAATGGCAGCCTCG+TGG + Chr1:25673755-25673774 MsG0180001706.01.T01:intron 55.0%
! GTGAGGAAGTGTGTGTGGAG+CGG + Chr1:25673368-25673387 MsG0180001706.01.T01:intron 55.0%
!! CCATCAAGTATCGGGAGCCT+TGG - Chr1:25679226-25679245 None:intergenic 55.0%
!! CTTGTGAGGAAGGGTTGGTG+AGG + Chr1:25673351-25673370 MsG0180001706.01.T01:intron 55.0%
!! GGTTGGTGAGGAAGTGTGTG+TGG + Chr1:25673363-25673382 MsG0180001706.01.T01:intron 55.0%
!! TCAAGTATCGGGAGCCTTGG+TGG - Chr1:25679223-25679242 None:intergenic 55.0%
AGAGGCCAGCCATCCAACCA+GGG - Chr1:25673210-25673229 None:intergenic 60.0%
AGGGAATGTGCGTGGATGCC+TGG + Chr1:25677492-25677511 MsG0180001706.01.T01:intron 60.0%
ATCGGGAGCCTTGGTGGAAG+AGG - Chr1:25679217-25679236 None:intergenic 60.0%
GGAGCTTGCACGGGATCCAA+AGG + Chr1:25680440-25680459 MsG0180001706.01.T01:CDS 60.0%
TAAAGGTCGCCATGTGGGCC+GGG - Chr1:25676674-25676693 None:intergenic 60.0%
TCTTGATGTCCCGGCCCACA+TGG + Chr1:25676662-25676681 MsG0180001706.01.T01:intron 60.0%
TTTGGGGGAACGTCTGGGTC+AGG - Chr1:25678915-25678934 None:intergenic 60.0%
!! GCTCCCGATACTTGATGGCG+AGG + Chr1:25679228-25679247 MsG0180001706.01.T01:CDS 60.0%
!! GTTGGATGGCTGGCCTCTGA+AGG + Chr1:25673212-25673231 MsG0180001706.01.T01:CDS 60.0%
ATGACTCCGTCTGCGGACCC+AGG + Chr1:25679767-25679786 MsG0180001706.01.T01:intron 65.0%
CAGAGGCCAGCCATCCAACC+AGG - Chr1:25673211-25673230 None:intergenic 65.0%
GTGAGGCGTGGAAGTGGCGT+AGG + Chr1:25673318-25673337 MsG0180001706.01.T01:intron 65.0%
GTGTACCCTGGGTCCGCAGA+CGG - Chr1:25679776-25679795 None:intergenic 65.0%
TGACTCCGTCTGCGGACCCA+GGG + Chr1:25679768-25679787 MsG0180001706.01.T01:intron 65.0%
TGGGGGTGAATGGTGAGGCG+TGG + Chr1:25673306-25673325 MsG0180001706.01.T01:intron 65.0%
TGGGGTGGGGGTGAATGGTG+AGG + Chr1:25673301-25673320 MsG0180001706.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 25673102 25680974 25673102 ID=MsG0180001706.01;Name=MsG0180001706.01
Chr1 mRNA 25673102 25680974 25673102 ID=MsG0180001706.01.T01;Parent=MsG0180001706.01;Name=MsG0180001706.01.T01;_AED=0.44;_eAED=0.46;_QI=0|0.75|0.77|1|1|1|9|0|379
Chr1 exon 25673102 25673233 25673102 ID=MsG0180001706.01.T01:exon:18461;Parent=MsG0180001706.01.T01
Chr1 exon 25676871 25676981 25676871 ID=MsG0180001706.01.T01:exon:18462;Parent=MsG0180001706.01.T01
Chr1 exon 25677995 25678081 25677995 ID=MsG0180001706.01.T01:exon:18463;Parent=MsG0180001706.01.T01
Chr1 exon 25678810 25678955 25678810 ID=MsG0180001706.01.T01:exon:18464;Parent=MsG0180001706.01.T01
Chr1 exon 25679099 25679249 25679099 ID=MsG0180001706.01.T01:exon:18465;Parent=MsG0180001706.01.T01
Chr1 exon 25679326 25679520 25679326 ID=MsG0180001706.01.T01:exon:18466;Parent=MsG0180001706.01.T01
Chr1 exon 25680429 25680500 25680429 ID=MsG0180001706.01.T01:exon:18467;Parent=MsG0180001706.01.T01
Chr1 exon 25680639 25680712 25680639 ID=MsG0180001706.01.T01:exon:18468;Parent=MsG0180001706.01.T01
Chr1 exon 25680803 25680974 25680803 ID=MsG0180001706.01.T01:exon:18469;Parent=MsG0180001706.01.T01
Chr1 CDS 25673102 25673233 25673102 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25676871 25676981 25676871 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25677995 25678081 25677995 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25678810 25678955 25678810 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25679099 25679249 25679099 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25679326 25679520 25679326 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25680429 25680500 25680429 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25680639 25680712 25680639 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Chr1 CDS 25680803 25680974 25680803 ID=MsG0180001706.01.T01:cds;Parent=MsG0180001706.01.T01
Gene Sequence

>MsG0180001706.01.T01

ATGGATAAGATTTGGGAGGATGTGGGTCAGTTTGATGGAGGGTGGTTGAGAGATAATATTAGTCGGAAGGTGAGGGATATGGCTTCTACTCTGTTTTGGATAGATCCCTGGTTGGATGGCTGGCCTCTGAAGGACAATAAGGTACTTACCACCACCGAGAGATTAATAGCGTTTGCTCTGCTAGTTGAGGCTTATTCATCCCAGAATCCGGCTTCAAATCCTTTCATAAGCTTTATCATAAATGCTTCCTGTCATGAAGGGTCCACAAAAATTGAGAAGGCGTTTATTCTGCAACTATTAGGTGTTGATGTATCCCATAATGGCAAAGAGGACTTCCCTTCACTAGATCAGTTGAAGCAGCAGTTTTCTGATAAAGATAATCAAGAACCATATCATCATTTGTTTAAAGATGGTTTTGTAAAAAACGTAGTTCCTGACCCAGACGTTCCCCCAAATTGTGATACAGATTCATCAGAGTTTGATCAGCGACCTGGAACACAGCCTAAACTTGGCACCGGAAATAAAGATGAAGCAGTGGTTGGCTTATTGTCAAATATTTCACTGGAAGGATTGAACCCTCACTGGATTAGACCTCTTCCACCAAGGCTCCCGATACTTGATGGCGAGCTAGTTTGGGTCAACCCAAATGGTAAACCCTTTCCATCTATGGTAAACGCTTTTCAGCTAGCTGGGGTCAACCCTAATGACTACCCCGAGCTTATGTGGGACAATGGTATGTGCGTTGATACTAGTAGAGGGGCTGCAGTAAGGGACTTAATTGCAAAAGCACAGAAGGGAGCTCTTGCACCTGTACAGCAAGAGCAATTCCTTTTGGAGCTTGCACGGGATCCAAAGGTTGTATATCACTGTGGACTGACTCCAAGAAAGTTGCCGGAACTGGTGGAAAACAATCCCCTAATTGCAGTTGAAATTCTCACTAATCTGATAAAATCTCCTGACATATCAGAATACTTTACAGTACTTGTCAATATGGACATGAGTCTACATTCAATGGAAGTTGTGAACAGGCTTACAACAGCAGTTGAACTGCCGTCAGAATTCATTCACATGTACATCACTAATTGTATATCATCCTGTGTGAACATCAAGGTACTTCACTTTGCCTTTGCTGTAACATGA
Protein sequence

>MsG0180001706.01.T01

MDKIWEDVGQFDGGWLRDNISRKVRDMASTLFWIDPWLDGWPLKDNKVLTTTERLIAFALLVEAYSSQNPASNPFISFIINASCHEGSTKIEKAFILQLLGVDVSHNGKEDFPSLDQLKQQFSDKDNQEPYHHLFKDGFVKNVVPDPDVPPNCDTDSSEFDQRPGTQPKLGTGNKDEAVVGLLSNISLEGLNPHWIRPLPPRLPILDGELVWVNPNGKPFPSMVNAFQLAGVNPNDYPELMWDNGMCVDTSRGAAVRDLIAKAQKGALAPVQQEQFLLELARDPKVVYHCGLTPRKLPELVENNPLIAVEILTNLIKSPDISEYFTVLVNMDMSLHSMEVVNRLTTAVELPSEFIHMYITNCISSCVNIKVLHFAFAVT*