AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010884.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010884.01.T01 MTR_2g093730 73.737 396 47 7 15 383 1 366 0.0 541
MsG0280010884.01.T01 MTR_4g060510 56.171 397 115 7 17 383 2 369 5.52e-136 409
MsG0280010884.01.T01 MTR_4g060510 56.171 397 115 7 17 383 2 369 1.97e-135 408
MsG0280010884.01.T01 MTR_4g060510 56.171 397 115 7 17 383 2 369 2.06e-135 409
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010884.01.T01 AT5G60410 47.970 394 148 7 17 383 2 365 4.20e-110 341
MsG0280010884.01.T01 AT5G60410 47.970 394 148 7 17 383 2 365 5.96e-110 342
MsG0280010884.01.T01 AT5G60410 47.970 394 148 7 17 383 2 365 5.96e-110 342
MsG0280010884.01.T01 AT5G60410 47.970 394 148 7 17 383 2 365 6.24e-110 342
MsG0280010884.01.T01 AT5G60410 47.970 394 148 7 17 383 2 365 6.24e-110 342
MsG0280010884.01.T01 AT5G60410 47.970 394 148 7 17 383 2 365 1.01e-109 342

Find 95 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATCAGAATTTGATATTC+AGG 0.223040 2:+76388429 MsG0280010884.01.T01:CDS
CCTGCTTCGAAATTCCTATC+TGG 0.250377 2:-76384756 None:intergenic
TATTTCAAATAAAATGTATC+TGG 0.260286 2:-76386381 None:intergenic
CTTCAACTGCGTTATTATTC+CGG 0.276975 2:+76386329 MsG0280010884.01.T01:CDS
AGCAGTAATGTGAAAATTAA+AGG 0.290955 2:+76386022 MsG0280010884.01.T01:CDS
CCCAGAAAACTGCAGGTATC+TGG 0.298446 2:+76385959 MsG0280010884.01.T01:intron
CCAATACATCAAAGCCTTAC+TGG 0.301017 2:-76390140 None:intergenic
CAAACCTCCATTTCAATCTT+CGG 0.328808 2:-76383626 None:intergenic
TGAACGACAAAGTTCCATTC+AGG 0.348798 2:+76388561 MsG0280010884.01.T01:CDS
TCACAATTGCTTGGGGCTAA+TGG 0.363958 2:+76388872 MsG0280010884.01.T01:CDS
TATGCAGACCTAGTTGTAAA+TGG 0.367805 2:+76388599 MsG0280010884.01.T01:CDS
CGAAGATTGAAATGGAGGTT+TGG 0.373598 2:+76383627 None:intergenic
GACCCGGTTCACAATTGCTT+GGG 0.383410 2:+76388864 MsG0280010884.01.T01:CDS
TTCTCTATATCACAGGTTCT+CGG 0.387738 2:+76387433 MsG0280010884.01.T01:intron
GCTGAAGAATCTGTGCAAAA+TGG 0.389253 2:+76383992 MsG0280010884.01.T01:CDS
CGCTCACCATCGGACTCCTT+TGG 0.395037 2:-76389996 None:intergenic
TGATTTGATTTCAAGTTGTA+AGG 0.400568 2:+76384016 MsG0280010884.01.T01:CDS
AGCCCCAAGCAATTGTGAAC+CGG 0.401905 2:-76388867 None:intergenic
GGGGCTAATGGTCGCGATGA+TGG 0.403802 2:+76388884 MsG0280010884.01.T01:CDS
TAGGGGTCCGCATTGTTAGA+AGG 0.416663 2:+76389176 MsG0280010884.01.T01:CDS
TTGTTGTGGCAGCATGCTAT+TGG 0.419972 2:+76383956 MsG0280010884.01.T01:intron
AAAGATGTGCTTACCCAGAT+AGG 0.428211 2:+76384742 MsG0280010884.01.T01:CDS
AAATAAAATGTATCTGGGAT+TGG 0.429679 2:-76386375 None:intergenic
CCCTTTACTTCCGGTGAAGT+TGG 0.441155 2:+76387469 MsG0280010884.01.T01:CDS
AGTCCTTCAGTGGGTGTATC+CGG 0.442658 2:-76386348 None:intergenic
TAGAAGGCGCACCTTGCAAC+AGG 0.443404 2:+76389192 MsG0280010884.01.T01:CDS
AATGATGCACCCTTTACTTC+CGG 0.457176 2:+76387460 MsG0280010884.01.T01:CDS
GACAAATCCGAAGATTGAAA+TGG 0.458586 2:+76383619 None:intergenic
CTGTGTTTCTATCTTGTCAA+GGG 0.458686 2:+76386541 MsG0280010884.01.T01:CDS
TTCCCCAGTGGCTAAAGTAC+GGG 0.461615 2:+76385663 MsG0280010884.01.T01:intron
TCAGCCTTCGTTGTCCAGTA+AGG 0.468725 2:+76390126 MsG0280010884.01.T01:CDS
CTGCTTCGAAATTCCTATCT+GGG 0.472513 2:-76384755 None:intergenic
TTTCCCCAGTGGCTAAAGTA+CGG 0.473254 2:+76385662 MsG0280010884.01.T01:intron
GCCAACTTCACCGGAAGTAA+AGG 0.473409 2:-76387470 None:intergenic
TGATATAGCATCAAAGGGGC+AGG 0.475210 2:+76385988 MsG0280010884.01.T01:CDS
GCCACTGATATAGCATCAAA+GGG 0.485428 2:+76385983 MsG0280010884.01.T01:CDS
CAGTTGAAGTTGCGCGACAC+AGG 0.486069 2:-76386315 None:intergenic
TCTGTGTTTCTATCTTGTCA+AGG 0.489650 2:+76386540 MsG0280010884.01.T01:CDS
TGCTGGTAGTGACAGTGATC+TGG 0.491024 2:+76390079 MsG0280010884.01.T01:CDS
TCAGAATTTGATATTCAGGT+TGG 0.492776 2:+76388433 MsG0280010884.01.T01:CDS
AGTTAACAAGATTTCTTTGA+CGG 0.497327 2:+76389129 MsG0280010884.01.T01:CDS
ATTTCAAATAAAATGTATCT+GGG 0.501376 2:-76386380 None:intergenic
GTCTGTTGTCGTGTTGGCGG+TGG 0.506543 2:+76390041 MsG0280010884.01.T01:CDS
ATCACGCCATATATAAAAGA+AGG 0.508358 2:+76389106 MsG0280010884.01.T01:CDS
GCTCGTGTCTGTTGTCGTGT+TGG 0.508835 2:+76390035 MsG0280010884.01.T01:CDS
CCAACTTCACCGGAAGTAAA+GGG 0.509400 2:-76387469 None:intergenic
AGACCCGGTTCACAATTGCT+TGG 0.510951 2:+76388863 MsG0280010884.01.T01:CDS
GTTAACAAGATTTCTTTGAC+GGG 0.520319 2:+76389130 MsG0280010884.01.T01:CDS
AGCCACTGATATAGCATCAA+AGG 0.521130 2:+76385982 MsG0280010884.01.T01:CDS
GATTCAACAAAATCAACATA+AGG 0.525415 2:-76387523 None:intergenic
AAAATGTATCTGGGATTGGC+GGG 0.526724 2:-76386371 None:intergenic
CCAGATAGGAATTTCGAAGC+AGG 0.526980 2:+76384756 MsG0280010884.01.T01:CDS
TACGTAAGATGAGTCGGCAG+TGG 0.528785 2:-76383702 None:intergenic
TGTGGCCATTGCATCCTGAA+TGG 0.533209 2:-76388575 None:intergenic
TTCGAAGCAGGGAAAGAAGC+AGG 0.539526 2:+76384768 MsG0280010884.01.T01:CDS
GATTGGCGGGAGTCCTTCAG+TGG 0.541084 2:-76386358 None:intergenic
ACTCACCTTCAGTTGGAACA+AGG 0.542006 2:-76387499 None:intergenic
GAAAATTAAAGGTGAAGTTG+AGG 0.546808 2:+76386033 MsG0280010884.01.T01:CDS
ACAACTAGGTCTGCATATTG+TGG 0.551359 2:-76388593 None:intergenic
AACTTCAAAACGCTCACCAT+CGG 0.561126 2:-76390006 None:intergenic
CCCCTTTGATGCTATATCAG+TGG 0.561142 2:-76385984 None:intergenic
AACCTTTGTAGCTGATTGAA+CGG 0.561678 2:-76386059 None:intergenic
TCAACTTGCAAGAGCACACA+AGG 0.562035 2:+76388396 MsG0280010884.01.T01:CDS
TAAAATGTATCTGGGATTGG+CGG 0.564407 2:-76386372 None:intergenic
GCCCCAAGCAATTGTGAACC+GGG 0.567771 2:-76388866 None:intergenic
AAATCCGAAGATTGAAATGG+AGG 0.572540 2:+76383622 None:intergenic
ATTGGCGGGAGTCCTTCAGT+GGG 0.575111 2:-76386357 None:intergenic
ATAAGGTACTCACCTTCAGT+TGG 0.578341 2:-76387506 None:intergenic
CGTGTCTGTTGTCGTGTTGG+CGG 0.579855 2:+76390038 MsG0280010884.01.T01:CDS
TTCTGCAGGATCTTATCGAT+AGG 0.585108 2:+76385110 MsG0280010884.01.T01:intron
CAGATAGGAATTTCGAAGCA+GGG 0.587077 2:+76384757 MsG0280010884.01.T01:CDS
GTTCGTGCAATTAATAGACC+CGG 0.593100 2:+76388848 MsG0280010884.01.T01:CDS
GGAAATTCAGCTGATGATGC+TGG 0.595408 2:+76390062 MsG0280010884.01.T01:CDS
ACAACCCTTGTTCCAACTGA+AGG 0.596684 2:+76387494 MsG0280010884.01.T01:CDS
TCTCGACACTCTGCACGGGG+TGG 0.596879 2:-76388366 None:intergenic
AAGTTCCATTCAGGATGCAA+TGG 0.597252 2:+76388570 MsG0280010884.01.T01:CDS
AGTTGAAGTTGCGCGACACA+GGG 0.599059 2:-76386314 None:intergenic
CTCACCTTCAGTTGGAACAA+GGG 0.599228 2:-76387498 None:intergenic
TTCCGTTCAATCAGCTACAA+AGG 0.599547 2:+76386057 MsG0280010884.01.T01:CDS
AGGGTTGTAGCCAACTTCAC+CGG 0.600565 2:-76387479 None:intergenic
GGAGCTTACGTAAGATGAGT+CGG 0.601243 2:-76383708 None:intergenic
ATAACATACCATTTACAACT+AGG 0.605454 2:-76388607 None:intergenic
GATCTTGAACATGATTCCAA+AGG 0.615356 2:+76389980 MsG0280010884.01.T01:intron
ACCCGGTTCACAATTGCTTG+GGG 0.615889 2:+76388865 MsG0280010884.01.T01:CDS
ACGTAAGATGAGTCGGCAGT+GGG 0.624737 2:-76383701 None:intergenic
ATTCCGGATACACCCACTGA+AGG 0.626165 2:+76386345 MsG0280010884.01.T01:CDS
ACTGCAATCTACCTGTTGCA+AGG 0.634896 2:-76389203 None:intergenic
GATATAGCATCAAAGGGGCA+GGG 0.643668 2:+76385989 MsG0280010884.01.T01:CDS
ATGATTCCAAAGGAGTCCGA+TGG 0.652079 2:+76389990 MsG0280010884.01.T01:CDS
TGACAAGATAGAAACACAGA+TGG 0.665556 2:-76386537 None:intergenic
TCTATCATCTCAGATGAACA+AGG 0.667294 2:+76385139 MsG0280010884.01.T01:CDS
TTAACAAGATTTCTTTGACG+GGG 0.711430 2:+76389131 MsG0280010884.01.T01:CDS
AAAGCCTTACTGGACAACGA+AGG 0.730770 2:-76390130 None:intergenic
CCACTGATATAGCATCAAAG+GGG 0.760721 2:+76385984 MsG0280010884.01.T01:CDS
AGGTGCGCCTTCTAACAATG+CGG 0.767838 2:-76389183 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAATAATAATATAT+GGG - Chr2:76385021-76385040 None:intergenic 0.0%
!! AAGAAAAATTATAAAAAATG+AGG - Chr2:76385917-76385936 None:intergenic 10.0%
!! GAAACTAAATTATTAATTTA+TGG - Chr2:76389951-76389970 None:intergenic 10.0%
!!! CTAAAATTAAATTTGATAAT+AGG - Chr2:76387003-76387022 None:intergenic 10.0%
!!! TAAATTAATAATTTAGTTTC+TGG + Chr2:76389951-76389970 MsG0280010884.01.T01:intron 10.0%
!!! TTAAAGTAGATTTTTTTTTA+TGG + Chr2:76384154-76384173 MsG0280010884.01.T01:intron 10.0%
!!! TTTTGTAAATTTTATTGATT+TGG + Chr2:76383903-76383922 MsG0280010884.01.T01:intron 10.0%
!! AAAGGAAAATAAATAAAAAG+AGG - Chr2:76387278-76387297 None:intergenic 15.0%
!! AATTTAATTAAAAACTTTCC+TGG + Chr2:76386239-76386258 MsG0280010884.01.T01:intron 15.0%
!! ATTGTAAATTTACAAAAATG+GGG - Chr2:76389479-76389498 None:intergenic 15.0%
!! ATTTCAAATAAAATGTATCT+GGG - Chr2:76386383-76386402 None:intergenic 15.0%
!! CATTGTAAATTTACAAAAAT+GGG - Chr2:76389480-76389499 None:intergenic 15.0%
!! CCTTCATTTAATTAAATAAT+CGG + Chr2:76388099-76388118 MsG0280010884.01.T01:intron 15.0%
!! TATTTCAAATAAAATGTATC+TGG - Chr2:76386384-76386403 None:intergenic 15.0%
!! TCATTGTAAATTTACAAAAA+TGG - Chr2:76389481-76389500 None:intergenic 15.0%
!!! ACTTTTAATTACAAGTAATA+TGG + Chr2:76388155-76388174 MsG0280010884.01.T01:intron 15.0%
!!! ATATTATCTTTGAAACTTAA+GGG + Chr2:76384833-76384852 MsG0280010884.01.T01:intron 15.0%
!!! ATGTGTGTTATTTTATATTA+TGG + Chr2:76387840-76387859 MsG0280010884.01.T01:intron 15.0%
!!! CATTGTGATATTATTTTTTT+TGG + Chr2:76384253-76384272 MsG0280010884.01.T01:intron 15.0%
!!! CTTTTAATTACAAGTAATAT+GGG + Chr2:76388156-76388175 MsG0280010884.01.T01:intron 15.0%
!!! TATTATTTTTTTTGGATTAC+TGG + Chr2:76384261-76384280 MsG0280010884.01.T01:intron 15.0%
!! AAAATCAGAATTTGATATTC+AGG + Chr2:76388429-76388448 MsG0280010884.01.T01:CDS 20.0%
!! AAAGTTAATAAATGTTGTCT+TGG - Chr2:76388041-76388060 None:intergenic 20.0%
!! AGATAAAAAACAATTCAACA+AGG + Chr2:76389756-76389775 MsG0280010884.01.T01:intron 20.0%
!! CATATAAGCTGAAATAAAAA+GGG - Chr2:76386442-76386461 None:intergenic 20.0%
!! CCGATTATTTAATTAAATGA+AGG - Chr2:76388102-76388121 None:intergenic 20.0%
!! CTATTTGATTATGATCATAT+AGG + Chr2:76388818-76388837 MsG0280010884.01.T01:intron 20.0%
!! CTGAGAAATTTGATAAAATT+TGG + Chr2:76389355-76389374 MsG0280010884.01.T01:intron 20.0%
!! GATATAATATTACTTTACTG+AGG + Chr2:76388270-76388289 MsG0280010884.01.T01:intron 20.0%
!! GCTATCATATATGAATAAAT+GGG - Chr2:76386922-76386941 None:intergenic 20.0%
!! TATAAAAAATGAGGACATTA+TGG - Chr2:76385908-76385927 None:intergenic 20.0%
!! TATAATGAAGTTAGTACTAA+TGG - Chr2:76385206-76385225 None:intergenic 20.0%
!! TGCTATCATATATGAATAAA+TGG - Chr2:76386923-76386942 None:intergenic 20.0%
!! TGTTGAATACGAAATATTTA+AGG - Chr2:76387960-76387979 None:intergenic 20.0%
!! TTAAATGTAGATATTTATGC+TGG + Chr2:76388983-76389002 MsG0280010884.01.T01:intron 20.0%
!!! AGCATTGATAAACTATATTA+AGG + Chr2:76385501-76385520 MsG0280010884.01.T01:intron 20.0%
!!! ATTGTTTTTTATCTTACTCA+AGG - Chr2:76389750-76389769 None:intergenic 20.0%
!!! CAAATTTTATCAAATTTCTC+AGG - Chr2:76389357-76389376 None:intergenic 20.0%
!!! CAGCTTATATTTGATAATTT+TGG + Chr2:76386262-76386281 MsG0280010884.01.T01:intron 20.0%
!!! CTTTTTATTTCAGCTTATAT+GGG + Chr2:76386441-76386460 MsG0280010884.01.T01:intron 20.0%
!!! GAAACAAATTTATTTTAGAG+GGG - Chr2:76387897-76387916 None:intergenic 20.0%
!!! GATATTATCTTTGAAACTTA+AGG + Chr2:76384832-76384851 MsG0280010884.01.T01:intron 20.0%
!!! GCTTTTATAGTTAAAAGTTA+AGG - Chr2:76389232-76389251 None:intergenic 20.0%
!!! GGAAACAAATTTATTTTAGA+GGG - Chr2:76387898-76387917 None:intergenic 20.0%
!!! TATTATCTTTGAAACTTAAG+GGG + Chr2:76384834-76384853 MsG0280010884.01.T01:intron 20.0%
!!! TCAACATTATTTTTGTGATT+AGG + Chr2:76384091-76384110 MsG0280010884.01.T01:intron 20.0%
!!! TCTATATACAGTTTTCATTT+AGG + Chr2:76387790-76387809 MsG0280010884.01.T01:intron 20.0%
!!! TGGAAACAAATTTATTTTAG+AGG - Chr2:76387899-76387918 None:intergenic 20.0%
!!! TTAACTCCTTCTTTTATATA+TGG - Chr2:76389115-76389134 None:intergenic 20.0%
!!! TTTTTATTTCAGCTTATATG+GGG + Chr2:76386442-76386461 MsG0280010884.01.T01:intron 20.0%
!!! TTTTTTTTTATCTGTTTGAG+TGG + Chr2:76384436-76384455 MsG0280010884.01.T01:intron 20.0%
! AAAAATGAAAACTCAGAAAG+AGG - Chr2:76387923-76387942 None:intergenic 25.0%
! AAAAATTCAACACAATTCCA+TGG - Chr2:76386498-76386517 None:intergenic 25.0%
! AAAAGACAAGTGAAAATTAG+TGG + Chr2:76385705-76385724 MsG0280010884.01.T01:intron 25.0%
! AAACTCAGAAAAGTGAAATT+AGG - Chr2:76383755-76383774 None:intergenic 25.0%
! AACAAAACAAAATCTACAAC+TGG - Chr2:76388693-76388712 None:intergenic 25.0%
! AACTCAGAAAAGTGAAATTA+GGG - Chr2:76383754-76383773 None:intergenic 25.0%
! AATGACAATAAACTCACAAT+CGG - Chr2:76388911-76388930 None:intergenic 25.0%
! AATGGATCCTAAATAAACAA+TGG + Chr2:76389618-76389637 MsG0280010884.01.T01:intron 25.0%
! ACTACGCTATTTAAAAGAAT+TGG - Chr2:76386863-76386882 None:intergenic 25.0%
! ACTCTTAAAAATAACCATAC+CGG - Chr2:76389892-76389911 None:intergenic 25.0%
! AGCAGTAATGTGAAAATTAA+AGG + Chr2:76386022-76386041 MsG0280010884.01.T01:CDS 25.0%
! AGTTAACAAGATTTCTTTGA+CGG + Chr2:76389129-76389148 MsG0280010884.01.T01:CDS 25.0%
! ATAACATACCATTTACAACT+AGG - Chr2:76388610-76388629 None:intergenic 25.0%
! ATGAAAATCTCTACCAATTT+AGG - Chr2:76387684-76387703 None:intergenic 25.0%
! ATGGATCCTAAATAAACAAT+GGG + Chr2:76389619-76389638 MsG0280010884.01.T01:intron 25.0%
! CCATATAAGCTGAAATAAAA+AGG - Chr2:76386443-76386462 None:intergenic 25.0%
! GAGAAAACAGAAATAATGAA+GGG + Chr2:76389684-76389703 MsG0280010884.01.T01:intron 25.0%
! GAGATTCATATTAGTACATA+TGG + Chr2:76387235-76387254 MsG0280010884.01.T01:intron 25.0%
! GATTCAACAAAATCAACATA+AGG - Chr2:76387526-76387545 None:intergenic 25.0%
! GGATAAAATACAATTCAACA+AGG + Chr2:76389828-76389847 MsG0280010884.01.T01:intron 25.0%
! TATACTTCAGATGAATGTAA+TGG + Chr2:76385791-76385810 MsG0280010884.01.T01:intron 25.0%
! TATCAATGCTTCTTCATTTA+GGG - Chr2:76385491-76385510 None:intergenic 25.0%
! TTATCAATGCTTCTTCATTT+AGG - Chr2:76385492-76385511 None:intergenic 25.0%
! TTATTAATTTATGGCACAGA+TGG - Chr2:76389942-76389961 None:intergenic 25.0%
! TTCATAGTTAACACATGATT+TGG + Chr2:76385833-76385852 MsG0280010884.01.T01:intron 25.0%
! TTGATTACATGTAATCAAGT+GGG - Chr2:76384908-76384927 None:intergenic 25.0%
! TTTGTCTTTGAATATCTCAT+TGG + Chr2:76385331-76385350 MsG0280010884.01.T01:intron 25.0%
!! AAATAAAATGTATCTGGGAT+TGG - Chr2:76386378-76386397 None:intergenic 25.0%
!! AATAAAAGTACAGGTACATT+TGG - Chr2:76386837-76386856 None:intergenic 25.0%
!! AATATCTACATTTAAAGTGC+AGG - Chr2:76388978-76388997 None:intergenic 25.0%
!! AATTGGTGTAATAAAAGTAC+AGG - Chr2:76386846-76386865 None:intergenic 25.0%
!! AGATATTTTGTTGCCTAAAT+TGG + Chr2:76387668-76387687 MsG0280010884.01.T01:intron 25.0%
!! ATATCGTTATAAGTGTCATT+AGG - Chr2:76388255-76388274 None:intergenic 25.0%
!! ATATCTACATTTAAAGTGCA+GGG - Chr2:76388977-76388996 None:intergenic 25.0%
!! ATCATTTCCATTATTTTCCT+TGG + Chr2:76386206-76386225 MsG0280010884.01.T01:intron 25.0%
!! ATTGCAATATTTTCGTGTAA+AGG + Chr2:76384714-76384733 MsG0280010884.01.T01:CDS 25.0%
!! ATTGGTAGAGATTTTCATTT+AGG + Chr2:76387686-76387705 MsG0280010884.01.T01:intron 25.0%
!! GATATTGATAGTTGTAAAGA+TGG + Chr2:76386886-76386905 MsG0280010884.01.T01:intron 25.0%
!! GTATAATTTTATGAATCGTG+AGG - Chr2:76386156-76386175 None:intergenic 25.0%
!! GTGATTTTGAATGTAAACTT+CGG - Chr2:76387169-76387188 None:intergenic 25.0%
!! TAAGGTTTTTCATTTGCATA+TGG + Chr2:76385519-76385538 MsG0280010884.01.T01:intron 25.0%
!! TCTTTTATGTTAGAAGCTAT+GGG - Chr2:76389430-76389449 None:intergenic 25.0%
!! TTCTTTTATGTTAGAAGCTA+TGG - Chr2:76389431-76389450 None:intergenic 25.0%
!! TTGGTAGAGATTTTCATTTA+GGG + Chr2:76387687-76387706 MsG0280010884.01.T01:intron 25.0%
!! TTTCTTCTGAAAAAACACTT+TGG - Chr2:76386804-76386823 None:intergenic 25.0%
!! TTTCTTTAGTTCAAGTTAGA+TGG + Chr2:76385383-76385402 MsG0280010884.01.T01:intron 25.0%
!! TTTGATGTCAAACTTGATTT+TGG - Chr2:76387100-76387119 None:intergenic 25.0%
!! TTTTTATATTCCCTTGTAAC+TGG + Chr2:76387373-76387392 MsG0280010884.01.T01:intron 25.0%
!!! AGTTCAGATTTTTTCATTAG+TGG - Chr2:76389455-76389474 None:intergenic 25.0%
!!! AGTTTTCATTTTTTGTCTGA+AGG + Chr2:76387930-76387949 MsG0280010884.01.T01:intron 25.0%
!!! CCTTTTTATTTCAGCTTATA+TGG + Chr2:76386440-76386459 MsG0280010884.01.T01:intron 25.0%
!!! GGTGTTTCTTATTTTAACTA+AGG - Chr2:76385463-76385482 None:intergenic 25.0%
!!! GGTTATGATTTTGATTTGAT+TGG + Chr2:76383924-76383943 MsG0280010884.01.T01:intron 25.0%
!!! TAACAAGTTGATTAGTTTAC+AGG - Chr2:76385639-76385658 None:intergenic 25.0%
!!! TATGTTGATTTTGTTGAATC+TGG + Chr2:76387526-76387545 MsG0280010884.01.T01:CDS 25.0%
!!! TGAAATATGTTTTGTTGGTA+TGG + Chr2:76389803-76389822 MsG0280010884.01.T01:intron 25.0%
!!! TGATTTGATTTCAAGTTGTA+AGG + Chr2:76384016-76384035 MsG0280010884.01.T01:CDS 25.0%
!!! TGATTTGGTTATCTGTTTTT+AGG + Chr2:76385848-76385867 MsG0280010884.01.T01:intron 25.0%
!!! TTGATTACGTTGATTTATGT+AGG - Chr2:76388207-76388226 None:intergenic 25.0%
!!! TTTTATTTCAGCTTATATGG+GGG + Chr2:76386443-76386462 MsG0280010884.01.T01:intron 25.0%
AAAGTCAATAGTCAGTATAG+TGG - Chr2:76384681-76384700 None:intergenic 30.0%
AAATAACACGACACTTGTAA+TGG - Chr2:76388004-76388023 None:intergenic 30.0%
AACTACAATAGATTCAACCA+AGG - Chr2:76383840-76383859 None:intergenic 30.0%
AAGGAAGATATCATTTAGTG+TGG - Chr2:76385444-76385463 None:intergenic 30.0%
AAGTCAATAGTCAGTATAGT+GGG - Chr2:76384680-76384699 None:intergenic 30.0%
AATAACACGACACTTGTAAT+GGG - Chr2:76388003-76388022 None:intergenic 30.0%
AATGGCAATATATGGTTTAG+AGG + Chr2:76384525-76384544 MsG0280010884.01.T01:intron 30.0%
ACTCAGAAAAGTGAAATTAG+GGG - Chr2:76383753-76383772 None:intergenic 30.0%
AGGAAGATATCATTTAGTGT+GGG - Chr2:76385443-76385462 None:intergenic 30.0%
ATAGATTCAACCAAGGATTA+AGG - Chr2:76383833-76383852 None:intergenic 30.0%
ATCACGCCATATATAAAAGA+AGG + Chr2:76389106-76389125 MsG0280010884.01.T01:CDS 30.0%
ATGACAATAAACTCACAATC+GGG - Chr2:76388910-76388929 None:intergenic 30.0%
ATGACATCCAAGGAAAATAA+TGG - Chr2:76386216-76386235 None:intergenic 30.0%
ATTATCAAATATAAGCTGCC+AGG - Chr2:76386260-76386279 None:intergenic 30.0%
ATTATGTGTAATCTTCTCCT+GGG + Chr2:76388634-76388653 MsG0280010884.01.T01:intron 30.0%
ATTGTGAAACTTTGTTAAGC+AGG + Chr2:76384602-76384621 MsG0280010884.01.T01:intron 30.0%
ATTTCATCTACCTTAATCCT+TGG + Chr2:76383820-76383839 MsG0280010884.01.T01:intron 30.0%
CAAGTTAGATGGAAATTCTA+GGG + Chr2:76385394-76385413 MsG0280010884.01.T01:intron 30.0%
CCAACAAAACATATTTCAAC+AGG - Chr2:76389801-76389820 None:intergenic 30.0%
CTTCTACTAATATACTTGAG+CGG + Chr2:76388489-76388508 MsG0280010884.01.T01:intron 30.0%
CTTGATTACATGTAATCAAG+TGG - Chr2:76384928-76384909 None:intergenic 30.0%
GAAAATTAAAGGTGAAGTTG+AGG + Chr2:76386033-76386052 MsG0280010884.01.T01:CDS 30.0%
GAATCATTCAAACAGAAACA+CGG - Chr2:76388342-76388361 None:intergenic 30.0%
GGAGAAAACAGAAATAATGA+AGG + Chr2:76389683-76389702 MsG0280010884.01.T01:intron 30.0%
GTTAACAAGATTTCTTTGAC+GGG + Chr2:76389130-76389149 MsG0280010884.01.T01:CDS 30.0%
TAAAAAGGGAACATGACATA+CGG - Chr2:76386428-76386447 None:intergenic 30.0%
TAACCAAAACATATAGACAG+TGG - Chr2:76387767-76387786 None:intergenic 30.0%
TAAGACAACTGCAGAAAATT+CGG - Chr2:76388950-76388969 None:intergenic 30.0%
TAGTGGTAAATGGCAATATA+TGG + Chr2:76384517-76384536 MsG0280010884.01.T01:intron 30.0%
TATAAAAGCTGAATGTCTGT+TGG + Chr2:76389243-76389262 MsG0280010884.01.T01:intron 30.0%
TATTATGTGTAATCTTCTCC+TGG + Chr2:76388633-76388652 MsG0280010884.01.T01:intron 30.0%
TCAAGTTAGATGGAAATTCT+AGG + Chr2:76385393-76385412 MsG0280010884.01.T01:intron 30.0%
TCAGAATTTGATATTCAGGT+TGG + Chr2:76388433-76388452 MsG0280010884.01.T01:CDS 30.0%
TCAGTTTAATGGAGCAATAA+CGG - Chr2:76386605-76386624 None:intergenic 30.0%
TCATTGGATGTTGTAAATTG+TGG + Chr2:76385347-76385366 MsG0280010884.01.T01:intron 30.0%
TGGATCCTAAATAAACAATG+GGG + Chr2:76389620-76389639 MsG0280010884.01.T01:intron 30.0%
TGTGGGATAAATAAAAGGAT+AGG - Chr2:76387408-76387427 None:intergenic 30.0%
TTAAATTCACATGACATCCA+AGG - Chr2:76386226-76386245 None:intergenic 30.0%
TTAACAAGATTTCTTTGACG+GGG + Chr2:76389131-76389150 MsG0280010884.01.T01:CDS 30.0%
TTACCTTTGTTAACTGCTAT+GGG + Chr2:76384391-76384410 MsG0280010884.01.T01:intron 30.0%
TTCCTTTAAGTCGACTATAT+TGG + Chr2:76385872-76385891 MsG0280010884.01.T01:intron 30.0%
TTCGTATCTTATATGCTACT+AGG + Chr2:76387645-76387664 MsG0280010884.01.T01:intron 30.0%
TTTACCTTTGTTAACTGCTA+TGG + Chr2:76384390-76384409 MsG0280010884.01.T01:intron 30.0%
TTTCATACCTCTTGAAATTC+TGG + Chr2:76384989-76385008 MsG0280010884.01.T01:intron 30.0%
! ATTAGAAATATTTGTTGCCC+AGG + Chr2:76387589-76387608 MsG0280010884.01.T01:intron 30.0%
! ATTGGATCAGTTATTTGTTG+TGG + Chr2:76383942-76383961 MsG0280010884.01.T01:intron 30.0%
! CCTGTTGAAATATGTTTTGT+TGG + Chr2:76389798-76389817 MsG0280010884.01.T01:intron 30.0%
! CTAGTTAATGTCTAGTTCAT+TGG + Chr2:76384548-76384567 MsG0280010884.01.T01:intron 30.0%
! CTTTTATGTTAGAAGCTATG+GGG - Chr2:76389429-76389448 None:intergenic 30.0%
! TAACCACTGTCTATATGTTT+TGG + Chr2:76387761-76387780 MsG0280010884.01.T01:intron 30.0%
! TCAACAAGGATGTTTTCTTT+TGG + Chr2:76389770-76389789 MsG0280010884.01.T01:intron 30.0%
! TTAATGTCTAGTTCATTGGA+TGG + Chr2:76384552-76384571 MsG0280010884.01.T01:intron 30.0%
!! ATATGTTTTGTTGGTATGGT+TGG + Chr2:76389807-76389826 MsG0280010884.01.T01:intron 30.0%
!! ATTTGATATTCAGGTTGGTT+TGG + Chr2:76388438-76388457 MsG0280010884.01.T01:intron 30.0%
!! TGATTAGTTTACAGGAGAAA+GGG - Chr2:76385631-76385650 None:intergenic 30.0%
!! TTGATTAGTTTACAGGAGAA+AGG - Chr2:76385632-76385651 None:intergenic 30.0%
!!! ACGTTATCTTTTGGGTTTTT+GGG + Chr2:76384642-76384661 MsG0280010884.01.T01:intron 30.0%
!!! AGGTTTTTTGTGCCATTTAA+AGG + Chr2:76387810-76387829 MsG0280010884.01.T01:intron 30.0%
!!! GCATAATGCGTTTTTTTTAG+TGG + Chr2:76384500-76384519 MsG0280010884.01.T01:intron 30.0%
!!! GCGTTTTTTTTAGTGGTAAA+TGG + Chr2:76384507-76384526 MsG0280010884.01.T01:intron 30.0%
!!! GGTTTTTTGTGCCATTTAAA+GGG + Chr2:76387811-76387830 MsG0280010884.01.T01:intron 30.0%
!!! GTTTCAAAGTTTTTTCTCCA+TGG + Chr2:76386478-76386497 MsG0280010884.01.T01:intron 30.0%
!!! GTTTTTTGTGAAAATCACAG+TGG + Chr2:76384230-76384249 MsG0280010884.01.T01:intron 30.0%
!!! TACGTTATCTTTTGGGTTTT+TGG + Chr2:76384641-76384660 MsG0280010884.01.T01:intron 30.0%
!!! TATCTATTCTCTGGAGTTTT+AGG + Chr2:76385060-76385079 MsG0280010884.01.T01:intron 30.0%
!!! TGACTATTGACTTTTCATGT+AGG + Chr2:76384687-76384706 MsG0280010884.01.T01:intron 30.0%
AAAAAGGGAACATGACATAC+GGG - Chr2:76386427-76386446 None:intergenic 35.0%
AAACTCAGACTAAGTGTGTT+TGG - Chr2:76387209-76387228 None:intergenic 35.0%
AACCTAGTGAAACCAAGATT+TGG - Chr2:76387073-76387092 None:intergenic 35.0%
AACCTTTGTAGCTGATTGAA+CGG - Chr2:76386062-76386081 None:intergenic 35.0%
AACTCAGACTAAGTGTGTTT+GGG - Chr2:76387208-76387227 None:intergenic 35.0%
AAGCTATGGTCTTCAGATTA+TGG - Chr2:76389402-76389421 None:intergenic 35.0%
AATGACATCATATGTAGGCT+TGG + Chr2:76388528-76388547 MsG0280010884.01.T01:intron 35.0%
AATTAGTGGAGGACACATAT+AGG + Chr2:76385719-76385738 MsG0280010884.01.T01:intron 35.0%
ACAGCATGATATCTATTCTC+TGG + Chr2:76385051-76385070 MsG0280010884.01.T01:intron 35.0%
ACATGTAATCAAGTGGGAAA+AGG - Chr2:76384902-76384921 None:intergenic 35.0%
ACGCTTCTTTACATTCTCAT+AGG + Chr2:76386174-76386193 MsG0280010884.01.T01:intron 35.0%
ACTCAATGAATGTTTGGATG+AGG + Chr2:76384192-76384211 MsG0280010884.01.T01:intron 35.0%
ACTGTTGAAATATGTTTCGC+CGG + Chr2:76389870-76389889 MsG0280010884.01.T01:intron 35.0%
AGACAAGTGAAAATTAGTGG+AGG + Chr2:76385708-76385727 MsG0280010884.01.T01:intron 35.0%
AGCCTACATATGATGTCATT+TGG - Chr2:76388528-76388547 None:intergenic 35.0%
ATCACCACTCAATGAATGTT+TGG + Chr2:76384186-76384205 MsG0280010884.01.T01:intron 35.0%
ATGAAAACTCAGAAAGAGGA+TGG - Chr2:76387919-76387938 None:intergenic 35.0%
ATGTAATCAAGTGGGAAAAG+GGG - Chr2:76384900-76384919 None:intergenic 35.0%
CACATTACCATCCCTTTAAA+TGG - Chr2:76387825-76387844 None:intergenic 35.0%
CATCTAAAAAAGCTGCAAGA+TGG - Chr2:76386688-76386707 None:intergenic 35.0%
CATGTAATCAAGTGGGAAAA+GGG - Chr2:76384901-76384920 None:intergenic 35.0%
CGCTCAAGTATATTAGTAGA+AGG - Chr2:76388491-76388510 None:intergenic 35.0%
CTAAATAAACAATGGGGTTG+AGG + Chr2:76389626-76389645 MsG0280010884.01.T01:intron 35.0%
CTAAGTTGTGTTGCATTAGA+TGG + Chr2:76387332-76387351 MsG0280010884.01.T01:intron 35.0%
CTATCTTCACACTGTAAACA+AGG - Chr2:76386288-76386307 None:intergenic 35.0%
CTCAACCCCATTGTTTATTT+AGG - Chr2:76389628-76389647 None:intergenic 35.0%
CTCAATGAATGTTTGGATGA+GGG + Chr2:76384193-76384212 MsG0280010884.01.T01:intron 35.0%
CTTCAACTGCGTTATTATTC+CGG + Chr2:76386329-76386348 MsG0280010884.01.T01:CDS 35.0%
GAAAAGTGAAATTAGGGGTA+TGG - Chr2:76383748-76383767 None:intergenic 35.0%
GAGCATGTGGGATAAATAAA+AGG - Chr2:76387413-76387432 None:intergenic 35.0%
GATCTTGAACATGATTCCAA+AGG + Chr2:76389980-76389999 MsG0280010884.01.T01:intron 35.0%
GCACTTTGTAAAAGCAACTA+GGG - Chr2:76389557-76389576 None:intergenic 35.0%
GGAAACAGATCTATTGATCA+AGG + Chr2:76386104-76386123 MsG0280010884.01.T01:intron 35.0%
GTAAACTCCAGAATTTCAAG+AGG - Chr2:76384999-76385018 None:intergenic 35.0%
GTAACTTCTTCCAGTTACAA+GGG - Chr2:76387386-76387405 None:intergenic 35.0%
GTCTCCTAAACTCAGTTTAA+TGG - Chr2:76386616-76386635 None:intergenic 35.0%
GTTATATCCTAGCATGTGTT+TGG + Chr2:76386945-76386964 MsG0280010884.01.T01:intron 35.0%
TACCTTTGTTAACTGCTATG+GGG + Chr2:76384392-76384411 MsG0280010884.01.T01:intron 35.0%
TATGCAGACCTAGTTGTAAA+TGG + Chr2:76388599-76388618 MsG0280010884.01.T01:CDS 35.0%
TCAATGAATGTTTGGATGAG+GGG + Chr2:76384194-76384213 MsG0280010884.01.T01:intron 35.0%
TCATAATCACGTGCATGAAA+AGG - Chr2:76387296-76387315 None:intergenic 35.0%
TCATCCAAACATTCATTGAG+TGG - Chr2:76384193-76384212 None:intergenic 35.0%
TCTATCATCTCAGATGAACA+AGG + Chr2:76385139-76385158 MsG0280010884.01.T01:CDS 35.0%
TGAAACTAAAATAACACCCC+AGG - Chr2:76388654-76388673 None:intergenic 35.0%
TGACAAGATAGAAACACAGA+TGG - Chr2:76386540-76386559 None:intergenic 35.0%
TGCACTTTGTAAAAGCAACT+AGG - Chr2:76389558-76389577 None:intergenic 35.0%
TGCCAAATGACATCATATGT+AGG + Chr2:76388523-76388542 MsG0280010884.01.T01:intron 35.0%
TGCTCCATTAAACTGAGTTT+AGG + Chr2:76386609-76386628 MsG0280010884.01.T01:intron 35.0%
TGTGCATTTGCATTCACTAT+TGG - Chr2:76387736-76387755 None:intergenic 35.0%
TGTTAAGCAGGAATTTAGTG+CGG + Chr2:76384614-76384633 MsG0280010884.01.T01:intron 35.0%
TGTTGACAATCTGTGTTCTA+TGG + Chr2:76389304-76389323 MsG0280010884.01.T01:intron 35.0%
TTAAACGGGTAGAAACACAA+AGG + Chr2:76389662-76389681 MsG0280010884.01.T01:intron 35.0%
TTATGGAAAAAGAACCACAC+AGG - Chr2:76389385-76389404 None:intergenic 35.0%
TTATGTGTAATCTTCTCCTG+GGG + Chr2:76388635-76388654 MsG0280010884.01.T01:intron 35.0%
TTCTCTATATCACAGGTTCT+CGG + Chr2:76387433-76387452 MsG0280010884.01.T01:intron 35.0%
! AGTACATATGGTTCTGTTTG+AGG + Chr2:76387247-76387266 MsG0280010884.01.T01:intron 35.0%
! CACCAATATAGTCGACTTAA+AGG - Chr2:76385877-76385896 None:intergenic 35.0%
! CGGGTTTTACGTTATCTTTT+GGG + Chr2:76384634-76384653 MsG0280010884.01.T01:intron 35.0%
! CTGTGTTTCTATCTTGTCAA+GGG + Chr2:76386541-76386560 MsG0280010884.01.T01:CDS 35.0%
! GCTTCTTCATTTAGGGTTTA+GGG - Chr2:76385484-76385503 None:intergenic 35.0%
! GTAGAGATTTTCATTTAGGG+CGG + Chr2:76387690-76387709 MsG0280010884.01.T01:intron 35.0%
! GTCAATACTCTATTTTCTGC+AGG + Chr2:76385096-76385115 MsG0280010884.01.T01:intron 35.0%
! TAAAATGTATCTGGGATTGG+CGG - Chr2:76386375-76386394 None:intergenic 35.0%
! TAAAATTTGGAATGCCTGTG+TGG + Chr2:76389368-76389387 MsG0280010884.01.T01:intron 35.0%
! TAAACAAAAGCTGACTTTCC+TGG - Chr2:76386728-76386747 None:intergenic 35.0%
! TATCTTGTCAAGGGTTTGTT+TGG + Chr2:76386550-76386569 MsG0280010884.01.T01:intron 35.0%
! TCTGTGTTTCTATCTTGTCA+AGG + Chr2:76386540-76386559 MsG0280010884.01.T01:CDS 35.0%
! TGAAATTAGGGGTATGGTTT+GGG - Chr2:76383742-76383761 None:intergenic 35.0%
! TGATATAGAGAAGAGCATGT+GGG - Chr2:76387425-76387444 None:intergenic 35.0%
! TGCTTCTTCATTTAGGGTTT+AGG - Chr2:76385485-76385504 None:intergenic 35.0%
! TTGATTTTGCCTCCAAATCT+TGG + Chr2:76387058-76387077 MsG0280010884.01.T01:intron 35.0%
!! TATCTTTGAAACTTAAGGGG+TGG + Chr2:76384837-76384856 MsG0280010884.01.T01:intron 35.0%
!! TCTGTTGGTTTCTTTAATCC+AGG + Chr2:76389258-76389277 MsG0280010884.01.T01:intron 35.0%
!!! ACTTGTTATTTTTTCCCCAG+TGG + Chr2:76385651-76385670 MsG0280010884.01.T01:intron 35.0%
!!! CGTTATCTTTTGGGTTTTTG+GGG + Chr2:76384643-76384662 MsG0280010884.01.T01:intron 35.0%
!!! GAAATGGAGGTTTGGTTTTT+GGG + Chr2:76383635-76383654 MsG0280010884.01.T01:five_prime_UTR 35.0%
!!! GGTTTTGAAGTGTGATTGAA+TGG + Chr2:76384858-76384877 MsG0280010884.01.T01:intron 35.0%
!!! TGAAATGGAGGTTTGGTTTT+TGG + Chr2:76383634-76383653 MsG0280010884.01.T01:five_prime_UTR 35.0%
!!! TGGTGTTTCTGCTTTTTGTT+TGG + Chr2:76384572-76384591 MsG0280010884.01.T01:intron 35.0%
!!! TTTTGTGCCATTTAAAGGGA+TGG + Chr2:76387815-76387834 MsG0280010884.01.T01:intron 35.0%
AAACAATGGGGTTGAGGATA+AGG + Chr2:76389632-76389651 MsG0280010884.01.T01:intron 40.0%
AAAGATGTGCTTACCCAGAT+AGG + Chr2:76384742-76384761 MsG0280010884.01.T01:CDS 40.0%
AACTTCAAAACGCTCACCAT+CGG - Chr2:76390009-76390028 None:intergenic 40.0%
AAGTTCCATTCAGGATGCAA+TGG + Chr2:76388570-76388589 MsG0280010884.01.T01:CDS 40.0%
AATGATGCACCCTTTACTTC+CGG + Chr2:76387460-76387479 MsG0280010884.01.T01:CDS 40.0%
ACAACTAGGTCTGCATATTG+TGG - Chr2:76388596-76388615 None:intergenic 40.0%
ACCTTTGTTAACTGCTATGG+GGG + Chr2:76384393-76384412 MsG0280010884.01.T01:intron 40.0%
AGCCACTGATATAGCATCAA+AGG + Chr2:76385982-76386001 MsG0280010884.01.T01:CDS 40.0%
AGGATTACGTTGTTTGCCTT+AGG - Chr2:76389730-76389749 None:intergenic 40.0%
AGTAGTAGTAGCAGTAGTAG+TGG - Chr2:76388135-76388154 None:intergenic 40.0%
AGTCAGATGGTTAAGCAAGT+TGG - Chr2:76389581-76389600 None:intergenic 40.0%
CAGATAGGAATTTCGAAGCA+GGG + Chr2:76384757-76384776 MsG0280010884.01.T01:CDS 40.0%
CATGAAACCAAACACATGCT+AGG - Chr2:76386955-76386974 None:intergenic 40.0%
CATGCTCTTCTCTATATCAC+AGG + Chr2:76387426-76387445 MsG0280010884.01.T01:intron 40.0%
CCACTGATATAGCATCAAAG+GGG + Chr2:76385984-76386003 MsG0280010884.01.T01:CDS 40.0%
CTAAGAATGCTGAACACCTA+AGG + Chr2:76389711-76389730 MsG0280010884.01.T01:intron 40.0%
CTAGTGAAACCAAGATTTGG+AGG - Chr2:76387070-76387089 None:intergenic 40.0%
CTCCAAATCTTGGTTTCACT+AGG + Chr2:76387068-76387087 MsG0280010884.01.T01:intron 40.0%
CTGCTTCGAAATTCCTATCT+GGG - Chr2:76384758-76384777 None:intergenic 40.0%
CTTGACTATTCTGATATGCC+TGG - Chr2:76389279-76389298 None:intergenic 40.0%
CTTGCTTAACCATCTGACTT+TGG + Chr2:76389582-76389601 MsG0280010884.01.T01:intron 40.0%
GAGGTATGAAAGTCCATTCA+CGG - Chr2:76384980-76384999 None:intergenic 40.0%
GCCACTGATATAGCATCAAA+GGG + Chr2:76385983-76386002 MsG0280010884.01.T01:CDS 40.0%
GCTGAAGAATCTGTGCAAAA+TGG + Chr2:76383992-76384011 MsG0280010884.01.T01:CDS 40.0%
GGTAACAGTCCAAAGTTTCT+GGG + Chr2:76389325-76389344 MsG0280010884.01.T01:intron 40.0%
GGTAACTTCTTCCAGTTACA+AGG - Chr2:76387387-76387406 None:intergenic 40.0%
GTTAAGCAGGAATTTAGTGC+GGG + Chr2:76384615-76384634 MsG0280010884.01.T01:intron 40.0%
GTTCGTGCAATTAATAGACC+CGG + Chr2:76388848-76388867 MsG0280010884.01.T01:CDS 40.0%
TGAAATATGTTTCGCCGGTA+TGG + Chr2:76389875-76389894 MsG0280010884.01.T01:intron 40.0%
TGAACGACAAAGTTCCATTC+AGG + Chr2:76388561-76388580 MsG0280010884.01.T01:CDS 40.0%
TGAGTTTAGGAGACATCTAG+TGG + Chr2:76386622-76386641 MsG0280010884.01.T01:intron 40.0%
TGATGTTGTCAATCCGTGAA+TGG + Chr2:76384964-76384983 MsG0280010884.01.T01:intron 40.0%
TGGTAACAGTCCAAAGTTTC+TGG + Chr2:76389324-76389343 MsG0280010884.01.T01:intron 40.0%
TTAGTTTACAGGAGAAAGGG+AGG - Chr2:76385628-76385647 None:intergenic 40.0%
TTCCGTTCAATCAGCTACAA+AGG + Chr2:76386057-76386076 MsG0280010884.01.T01:CDS 40.0%
TTCTGCAGGATCTTATCGAT+AGG + Chr2:76385110-76385129 MsG0280010884.01.T01:intron 40.0%
TTTATCTGTTTGAGTGGCGT+TGG + Chr2:76384442-76384461 MsG0280010884.01.T01:intron 40.0%
! AAAATGTATCTGGGATTGGC+GGG - Chr2:76386374-76386393 None:intergenic 40.0%
! ACGCTCGCATTTTCTGTTTA+GGG + Chr2:76389158-76389177 MsG0280010884.01.T01:CDS 40.0%
! AGGAGACATCTAGTGGTTTT+AGG + Chr2:76386629-76386648 MsG0280010884.01.T01:intron 40.0%
! AGTGAAGCTTTTGCGAATCA+TGG + Chr2:76384309-76384328 MsG0280010884.01.T01:intron 40.0%
! ATAAGGTACTCACCTTCAGT+TGG - Chr2:76387509-76387528 None:intergenic 40.0%
! GATAAGGTGTCCTCTTAAAC+GGG + Chr2:76389648-76389667 MsG0280010884.01.T01:intron 40.0%
! GCGGGTTTTACGTTATCTTT+TGG + Chr2:76384633-76384652 MsG0280010884.01.T01:intron 40.0%
! GGATAAGGTGTCCTCTTAAA+CGG + Chr2:76389647-76389666 MsG0280010884.01.T01:intron 40.0%
! GTGAAATTAGGGGTATGGTT+TGG - Chr2:76383743-76383762 None:intergenic 40.0%
! GTGATATAGAGAAGAGCATG+TGG - Chr2:76387426-76387445 None:intergenic 40.0%
! TGTGTTTCTACCCGTTTAAG+AGG - Chr2:76389661-76389680 None:intergenic 40.0%
!! ATTTTCATTTAGGGCGGTGA+GGG + Chr2:76387696-76387715 MsG0280010884.01.T01:intron 40.0%
!!! TTTTTTCCCCAGAAAACTGC+AGG + Chr2:76385952-76385971 MsG0280010884.01.T01:intron 40.0%
AAAGCCTTACTGGACAACGA+AGG - Chr2:76390133-76390152 None:intergenic 45.0%
AACTGCACAAAATGCATGCC+TGG - Chr2:76384372-76384391 None:intergenic 45.0%
ACAAAGGTTCGATGTCTCTG+TGG + Chr2:76386073-76386092 MsG0280010884.01.T01:intron 45.0%
ACAACCCTTGTTCCAACTGA+AGG + Chr2:76387494-76387513 MsG0280010884.01.T01:CDS 45.0%
ACTCACCTTCAGTTGGAACA+AGG - Chr2:76387502-76387521 None:intergenic 45.0%
ACTGCAATCTACCTGTTGCA+AGG - Chr2:76389206-76389225 None:intergenic 45.0%
AGCTATGGGGTTAGAAGCTA+TGG - Chr2:76389416-76389435 None:intergenic 45.0%
AGGAATCAGCCCAGAAACTT+TGG - Chr2:76389337-76389356 None:intergenic 45.0%
ATGATTCCAAAGGAGTCCGA+TGG + Chr2:76389990-76390009 MsG0280010884.01.T01:CDS 45.0%
CCAACTTCACCGGAAGTAAA+GGG - Chr2:76387472-76387491 None:intergenic 45.0%
CCAGATAGGAATTTCGAAGC+AGG + Chr2:76384756-76384775 MsG0280010884.01.T01:CDS 45.0%
CCCCTTTGATGCTATATCAG+TGG - Chr2:76385987-76386006 None:intergenic 45.0%
CCTGCTTCGAAATTCCTATC+TGG - Chr2:76384759-76384778 None:intergenic 45.0%
CTCACCTTCAGTTGGAACAA+GGG - Chr2:76387501-76387520 None:intergenic 45.0%
GATAGAAACACAGATGGCTC+TGG - Chr2:76386534-76386553 None:intergenic 45.0%
GATATAGCATCAAAGGGGCA+GGG + Chr2:76385989-76386008 MsG0280010884.01.T01:CDS 45.0%
GATGAGGGGTGAGTTTGATT+AGG + Chr2:76384208-76384227 MsG0280010884.01.T01:intron 45.0%
GATGTCTCTGTGGAGTTCAT+TGG + Chr2:76386083-76386102 MsG0280010884.01.T01:intron 45.0%
GGAGCTTACGTAAGATGAGT+CGG - Chr2:76383711-76383730 None:intergenic 45.0%
GTCATGTGTGTGTCTGTGAT+AGG - Chr2:76385179-76385198 None:intergenic 45.0%
TCACAATTGCTTGGGGCTAA+TGG + Chr2:76388872-76388891 MsG0280010884.01.T01:CDS 45.0%
TCCCCCATAGCAGTTAACAA+AGG - Chr2:76384397-76384416 None:intergenic 45.0%
TGATATAGCATCAAAGGGGC+AGG + Chr2:76385988-76386007 MsG0280010884.01.T01:CDS 45.0%
TTGTTGTGGCAGCATGCTAT+TGG + Chr2:76383956-76383975 MsG0280010884.01.T01:intron 45.0%
TTTCCCCAGTGGCTAAAGTA+CGG + Chr2:76385662-76385681 MsG0280010884.01.T01:intron 45.0%
! AACCATCTGACTTTGGAGAG+AGG + Chr2:76389589-76389608 MsG0280010884.01.T01:intron 45.0%
! ACACGACACTTGTAATGGGA+CGG - Chr2:76387999-76388018 None:intergenic 45.0%
! ATTAGGGGTATGGTTTGGGA+TGG - Chr2:76383738-76383757 None:intergenic 45.0%
! CAGATACCTGCAGTTTTCTG+GGG - Chr2:76385961-76385980 None:intergenic 45.0%
! CCAGATACCTGCAGTTTTCT+GGG - Chr2:76385962-76385981 None:intergenic 45.0%
! CGCTCGCATTTTCTGTTTAG+GGG + Chr2:76389159-76389178 MsG0280010884.01.T01:CDS 45.0%
! GACGCTCGCATTTTCTGTTT+AGG + Chr2:76389157-76389176 MsG0280010884.01.T01:CDS 45.0%
! GCTACTATTTTCAGCTGACC+AGG + Chr2:76386707-76386726 MsG0280010884.01.T01:intron 45.0%
! GGAAATTCAGCTGATGATGC+TGG + Chr2:76390062-76390081 MsG0280010884.01.T01:CDS 45.0%
! TCAACTTGCAAGAGCACACA+AGG + Chr2:76388396-76388415 MsG0280010884.01.T01:CDS 45.0%
! TCCAGATACCTGCAGTTTTC+TGG - Chr2:76385963-76385982 None:intergenic 45.0%
! TGTTTTCTCGACACTCTGCA+CGG - Chr2:76388374-76388393 None:intergenic 45.0%
! TTAGGGGTATGGTTTGGGAT+GGG - Chr2:76383737-76383756 None:intergenic 45.0%
! TTTGGAGAGAGGTGTGTGAA+TGG + Chr2:76389600-76389619 MsG0280010884.01.T01:intron 45.0%
!! GATTTTCATTTAGGGCGGTG+AGG + Chr2:76387695-76387714 MsG0280010884.01.T01:intron 45.0%
!! CAATTAAAAATAATAATATA+TGG - Chr2:76385022-76385041 None:intergenic 5.0%
ACCCGGTTCACAATTGCTTG+GGG + Chr2:76388865-76388884 MsG0280010884.01.T01:CDS 50.0%
ACGTAAGATGAGTCGGCAGT+GGG - Chr2:76383704-76383723 None:intergenic 50.0%
AGACCCGGTTCACAATTGCT+TGG + Chr2:76388863-76388882 MsG0280010884.01.T01:CDS 50.0%
AGCCCCAAGCAATTGTGAAC+CGG - Chr2:76388870-76388889 None:intergenic 50.0%
AGGGTTGTAGCCAACTTCAC+CGG - Chr2:76387482-76387501 None:intergenic 50.0%
AGGTGCGCCTTCTAACAATG+CGG - Chr2:76389186-76389205 None:intergenic 50.0%
AGTCCTTCAGTGGGTGTATC+CGG - Chr2:76386351-76386370 None:intergenic 50.0%
AGTTGAAGTTGCGCGACACA+GGG - Chr2:76386317-76386336 None:intergenic 50.0%
ATTCCGGATACACCCACTGA+AGG + Chr2:76386345-76386364 MsG0280010884.01.T01:CDS 50.0%
CACCTCTCTCCAAAGTCAGA+TGG - Chr2:76389594-76389613 None:intergenic 50.0%
CCCAGAAAACTGCAGGTATC+TGG + Chr2:76385959-76385978 MsG0280010884.01.T01:intron 50.0%
CCCTTTACTTCCGGTGAAGT+TGG + Chr2:76387469-76387488 MsG0280010884.01.T01:CDS 50.0%
GACCCGGTTCACAATTGCTT+GGG + Chr2:76388864-76388883 MsG0280010884.01.T01:CDS 50.0%
GCCAACTTCACCGGAAGTAA+AGG - Chr2:76387473-76387492 None:intergenic 50.0%
GCCAATCTGACAGTGAATCC+AGG + Chr2:76384351-76384370 MsG0280010884.01.T01:intron 50.0%
GCCTGGATTCACTGTCAGAT+TGG - Chr2:76384355-76384374 None:intergenic 50.0%
TACGTAAGATGAGTCGGCAG+TGG - Chr2:76383705-76383724 None:intergenic 50.0%
TAGCCCGTACTTTAGCCACT+GGG - Chr2:76385669-76385688 None:intergenic 50.0%
TAGGGGTCCGCATTGTTAGA+AGG + Chr2:76389176-76389195 MsG0280010884.01.T01:CDS 50.0%
TCAGCCTTCGTTGTCCAGTA+AGG + Chr2:76390126-76390145 MsG0280010884.01.T01:CDS 50.0%
TGTGGCCATTGCATCCTGAA+TGG - Chr2:76388578-76388597 None:intergenic 50.0%
TTAGCCCGTACTTTAGCCAC+TGG - Chr2:76385670-76385689 None:intergenic 50.0%
TTCCCCAGTGGCTAAAGTAC+GGG + Chr2:76385663-76385682 MsG0280010884.01.T01:intron 50.0%
TTCGAAGCAGGGAAAGAAGC+AGG + Chr2:76384768-76384787 MsG0280010884.01.T01:CDS 50.0%
! GACACTTGTAATGGGACGGA+GGG - Chr2:76387995-76388014 None:intergenic 50.0%
! GGTATGGTTTGGGATGGGAT+GGG - Chr2:76383732-76383751 None:intergenic 50.0%
! GTTTTCTCGACACTCTGCAC+GGG - Chr2:76388373-76388392 None:intergenic 50.0%
! TGCTGGTAGTGACAGTGATC+TGG + Chr2:76390079-76390098 MsG0280010884.01.T01:CDS 50.0%
! TTTTCTCGACACTCTGCACG+GGG - Chr2:76388372-76388391 None:intergenic 50.0%
AGCCCGTACTTTAGCCACTG+GGG - Chr2:76385668-76385687 None:intergenic 55.0%
ATTGGCGGGAGTCCTTCAGT+GGG - Chr2:76386360-76386379 None:intergenic 55.0%
CAGTTGAAGTTGCGCGACAC+AGG - Chr2:76386318-76386337 None:intergenic 55.0%
CGTGTCTGTTGTCGTGTTGG+CGG + Chr2:76390038-76390057 MsG0280010884.01.T01:CDS 55.0%
GCCCCAAGCAATTGTGAACC+GGG - Chr2:76388869-76388888 None:intergenic 55.0%
GCTCGTGTCTGTTGTCGTGT+TGG + Chr2:76390035-76390054 MsG0280010884.01.T01:CDS 55.0%
! CGACACTTGTAATGGGACGG+AGG - Chr2:76387996-76388015 None:intergenic 55.0%
! GGGTATGGTTTGGGATGGGA+TGG - Chr2:76383733-76383752 None:intergenic 55.0%
! TAGAAGGCGCACCTTGCAAC+AGG + Chr2:76389192-76389211 MsG0280010884.01.T01:CDS 55.0%
CGCTCACCATCGGACTCCTT+TGG - Chr2:76389999-76390018 None:intergenic 60.0%
GATTGGCGGGAGTCCTTCAG+TGG - Chr2:76386361-76386380 None:intergenic 60.0%
GGGGCTAATGGTCGCGATGA+TGG + Chr2:76388884-76388903 MsG0280010884.01.T01:CDS 60.0%
! CATTTAGGGCGGTGAGGGAG+TGG + Chr2:76387701-76387720 MsG0280010884.01.T01:intron 60.0%
! GTCTGTTGTCGTGTTGGCGG+TGG + Chr2:76390041-76390060 MsG0280010884.01.T01:CDS 60.0%
TCTCGACACTCTGCACGGGG+TGG - Chr2:76388369-76388388 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 76383628 76390154 76383628 ID=MsG0280010884.01;Name=MsG0280010884.01
Chr2 mRNA 76383628 76390154 76383628 ID=MsG0280010884.01.T01;Parent=MsG0280010884.01;Name=MsG0280010884.01.T01;_AED=0.49;_eAED=0.53;_QI=95|0.46|0.5|1|0.46|0.5|14|0|385
Chr2 exon 76383628 76383721 76383628 ID=MsG0280010884.01.T01:exon:11718;Parent=MsG0280010884.01.T01
Chr2 exon 76383968 76384037 76383968 ID=MsG0280010884.01.T01:exon:11719;Parent=MsG0280010884.01.T01
Chr2 exon 76384709 76384789 76384709 ID=MsG0280010884.01.T01:exon:11720;Parent=MsG0280010884.01.T01
Chr2 exon 76385118 76385160 76385118 ID=MsG0280010884.01.T01:exon:11721;Parent=MsG0280010884.01.T01
Chr2 exon 76385671 76385713 76385671 ID=MsG0280010884.01.T01:exon:11722;Parent=MsG0280010884.01.T01
Chr2 exon 76385964 76386078 76385964 ID=MsG0280010884.01.T01:exon:11723;Parent=MsG0280010884.01.T01
Chr2 exon 76386297 76386426 76386297 ID=MsG0280010884.01.T01:exon:11724;Parent=MsG0280010884.01.T01
Chr2 exon 76386535 76386562 76386535 ID=MsG0280010884.01.T01:exon:11725;Parent=MsG0280010884.01.T01
Chr2 exon 76387448 76387553 76387448 ID=MsG0280010884.01.T01:exon:11726;Parent=MsG0280010884.01.T01
Chr2 exon 76388364 76388454 76388364 ID=MsG0280010884.01.T01:exon:11727;Parent=MsG0280010884.01.T01
Chr2 exon 76388545 76388640 76388545 ID=MsG0280010884.01.T01:exon:11728;Parent=MsG0280010884.01.T01
Chr2 exon 76388840 76388913 76388840 ID=MsG0280010884.01.T01:exon:11729;Parent=MsG0280010884.01.T01
Chr2 exon 76389106 76389213 76389106 ID=MsG0280010884.01.T01:exon:11730;Parent=MsG0280010884.01.T01
Chr2 exon 76389981 76390154 76389981 ID=MsG0280010884.01.T01:exon:11731;Parent=MsG0280010884.01.T01
Chr2 five_prime_UTR 76383628 76383721 76383628 ID=MsG0280010884.01.T01:five_prime_utr;Parent=MsG0280010884.01.T01
Chr2 five_prime_UTR 76383968 76383968 76383968 ID=MsG0280010884.01.T01:five_prime_utr;Parent=MsG0280010884.01.T01
Chr2 CDS 76383969 76384037 76383969 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76384709 76384789 76384709 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76385118 76385160 76385118 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76385671 76385713 76385671 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76385964 76386078 76385964 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76386297 76386426 76386297 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76386535 76386562 76386535 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76387448 76387553 76387448 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76388364 76388454 76388364 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76388545 76388640 76388545 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76388840 76388913 76388840 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76389106 76389213 76389106 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Chr2 CDS 76389981 76390154 76389981 ID=MsG0280010884.01.T01:cds;Parent=MsG0280010884.01.T01
Gene Sequence

>MsG0280010884.01.T01

ATGCTATTGGTGTTGTTGTTATTGCTGAAGAATCTGTGCAAAATGGATGATTTGATTTCAAGTTGTAAGGAAAAATTGCAATATTTTCGTGTAAAGGATCTCAAAGATGTGCTTACCCAGATAGGAATTTCGAAGCAGGGAAAGAAGCAGGATCTTATCGATAGGATATTATCTATCATCTCAGATGAACAAGTGGCTAAAGTACGGGCTAAGAAGAATGCTGTTGAAAAAGACAAAAAACTGCAGGTATCTGGAGCCACTGATATAGCATCAAAGGGGCAGGGTGCTTCAGACAGCAGTAATGTGAAAATTAAAGGTGAAGTTGAGGATTCCGTTCAATCAGCTACAAAGTGTGAAGATAGAAAATGCCCTGTGTCGCGCAACTTCAACTGCGTTATTATTCCGGATACACCCACTGAAGGACTCCCGCCAATCCCAGATACATTTTATTTGAAATATGTCGTCTCAGTCGTGCAGACCCAGCCATCTGTGTTTCTATCTTGTCAAGGGTTCTCGGTTTCAATGATGCACCCTTTACTTCCGGTGAAGTTGGCTACAACCCTTGTTCCAACTGAAGGTGAGTACCTTATGTTGATTTTGTTGAATCTGGATATAATCCACCCCGTGCAGAGTGTCGAGAAAACATTTCAACTTGCAAGAGCACACAAGGACATAGTATTAAAATCAGAATTTGATATTCAGGTTGGCTTGGTGCATGCTTCTGAACGACAAAGTTCCATTCAGGATGCAATGGCCACAATATGCAGACCTAGTTGTAAATGGTATGTTATTATTATTATGTGTTATTCTGTTCGTGCAATTAATAGACCCGGTTCACAATTGCTTGGGGCTAATGGTCGCGATGATGGCCCGATTATCACGCCATATATAAAAGAAGGAGTTAACAAGATTTCTTTGACGGGGTGTGACGCTCGCATTTTCTGTTTAGGGGTCCGCATTGTTAGAAGGCGCACCTTGCAACAGATCTTGAACATGATTCCAAAGGAGTCCGATGGTGAGCGTTTTGAAGTTGCTCTTGCTCGTGTCTGTTGTCGTGTTGGCGGTGGAAATTCAGCTGATGATGCTGGTAGTGACAGTGATCTGGAAGTAGTTTCAGATACTTTTAGCATCAGCCTTCGTTGTCCAGTAAGGCTTTGA
Protein sequence

>MsG0280010884.01.T01

MLLVLLLLLKNLCKMDDLISSCKEKLQYFRVKDLKDVLTQIGISKQGKKQDLIDRILSIISDEQVAKVRAKKNAVEKDKKLQVSGATDIASKGQGASDSSNVKIKGEVEDSVQSATKCEDRKCPVSRNFNCVIIPDTPTEGLPPIPDTFYLKYVVSVVQTQPSVFLSCQGFSVSMMHPLLPVKLATTLVPTEGEYLMLILLNLDIIHPVQSVEKTFQLARAHKDIVLKSEFDIQVGLVHASERQSSIQDAMATICRPSCKWYVIIIMCYSVRAINRPGSQLLGANGRDDGPIITPYIKEGVNKISLTGCDARIFCLGVRIVRRRTLQQILNMIPKESDGERFEVALARVCCRVGGGNSADDAGSDSDLEVVSDTFSISLRCPVRL*