AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002232.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002232.01.T01 MTR_2g084520 67.647 102 24 1 132 224 4 105 1.75e-37 142
MsG0180002232.01.T01 MTR_2g008750 38.406 138 80 1 462 594 506 643 7.31e-19 91.3
MsG0180002232.01.T01 MTR_2g008750 38.406 138 80 1 462 594 490 627 7.60e-19 91.3
MsG0180002232.01.T01 MTR_4g094248 46.988 83 44 0 483 565 457 539 6.14e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002232.01.T01 AT3G54500 39.680 625 333 18 2 606 5 605 1.39e-110 347
MsG0180002232.01.T01 AT3G54500 39.680 625 333 18 2 606 5 605 1.39e-110 347
MsG0180002232.01.T01 AT3G54500 39.904 624 332 18 2 606 5 604 2.29e-110 347
MsG0180002232.01.T01 AT3G54500 37.805 656 333 18 2 606 5 636 4.82e-105 333
MsG0180002232.01.T01 AT3G54500 40.328 548 280 16 82 606 2 525 2.69e-98 313
MsG0180002232.01.T01 AT3G54500 40.328 548 280 16 82 606 2 525 2.69e-98 313
MsG0180002232.01.T01 AT3G54500 36.043 652 327 19 5 606 8 619 2.57e-90 295
MsG0180002232.01.T01 AT3G54500 38.278 418 224 13 206 606 9 409 1.89e-60 209
MsG0180002232.01.T01 AT5G64170 45.631 103 51 1 463 565 417 514 5.33e-18 88.2
MsG0180002232.01.T01 AT5G64170 45.631 103 51 1 463 565 467 564 6.21e-18 88.2
MsG0180002232.01.T01 AT5G64170 45.631 103 51 1 463 565 467 564 6.21e-18 88.2

Find 133 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAACTACGAAAAGATTTC+TGG 0.141989 1:-35173072 MsG0180002232.01.T01:CDS
TTCAGCTTGCTAATATAATA+TGG 0.167194 1:-35174507 MsG0180002232.01.T01:CDS
ATGATGTTCTGATATGTTTC+AGG 0.210886 1:+35171911 None:intergenic
TCATCTCCCTCTTCAATTCT+TGG 0.243129 1:-35171956 MsG0180002232.01.T01:CDS
AGCAATGATGACCCTATATT+TGG 0.245263 1:-35173264 MsG0180002232.01.T01:CDS
CATAGACCTGTGGAGTTAAC+AGG 0.252015 1:-35170297 MsG0180002232.01.T01:CDS
CAAGTCCCACTGATGCTTTA+AGG 0.257456 1:-35173158 MsG0180002232.01.T01:CDS
AGGCATCAGCATGTGCTCTC+TGG 0.298254 1:-35171809 MsG0180002232.01.T01:CDS
AACCATATTGTGCAGGCTTC+AGG 0.302174 1:-35171456 MsG0180002232.01.T01:CDS
GAATCATCTTGTTCAATTAG+AGG 0.333648 1:+35171521 None:intergenic
AGACTTGCATGGCCAAATAT+AGG 0.334235 1:+35173252 None:intergenic
AGTTTCAGTCAGGAAATCTT+AGG 0.358237 1:-35171829 MsG0180002232.01.T01:CDS
TCAGGTCCTAGGAGTTGATT+TGG 0.365895 1:+35171929 None:intergenic
ACAAGAGGGGAAAGATTTGC+AGG 0.375758 1:-35172056 MsG0180002232.01.T01:CDS
AGGAAATTATTCTGACAAAC+TGG 0.382761 1:-35170277 MsG0180002232.01.T01:CDS
CATTGAGAGGCTTCAAGCTC+CGG 0.383942 1:+35170042 None:intergenic
ATCCTGAAGCCTGCACAATA+TGG 0.385534 1:+35171454 None:intergenic
TTCGTCTCTGTTTCAACATC+AGG 0.385600 1:+35170354 None:intergenic
CATCTCCCTCTTCAATTCTT+GGG 0.389661 1:-35171955 MsG0180002232.01.T01:CDS
ATCAACAACTTTCTCACATT+GGG 0.390601 1:-35170158 MsG0180002232.01.T01:CDS
AAGGAATAGATCAGGGCCTT+TGG 0.396684 1:-35173139 MsG0180002232.01.T01:CDS
TCAGCTTGCTAATATAATAT+GGG 0.399569 1:-35174506 MsG0180002232.01.T01:CDS
AAACAAGAAAGAAGTGAATC+AGG 0.402238 1:-35174422 MsG0180002232.01.T01:CDS
GAGGCGGCGGCAGCAAATGC+AGG 0.413237 1:-35171690 MsG0180002232.01.T01:CDS
TGTGTTAGCATTGGCATAGC+AGG 0.424322 1:+35171851 None:intergenic
GACTTGCATGGCCAAATATA+GGG 0.428786 1:+35173253 None:intergenic
CAGGTCTATGAAAGAGTAAA+CGG 0.431253 1:+35170310 None:intergenic
TGCCGACGAAGGTAAAGAAC+AGG 0.432064 1:-35173925 MsG0180002232.01.T01:CDS
TAAAACGAAGGTGCCACATA+TGG 0.437704 1:+35171884 None:intergenic
TTAAGATCTTCACTTGCCTC+TGG 0.438774 1:+35174445 None:intergenic
AAGAAAGCAGTAGCCAAAAC+AGG 0.439156 1:-35171180 MsG0180002232.01.T01:intron
TCCTGAGGAGTCATAGTTTG+AGG 0.439185 1:+35171728 None:intergenic
CTAGAATGACTTTGAATTTG+TGG 0.441648 1:+35171584 None:intergenic
AGTTCGAACCTTGACAATAA+TGG 0.444622 1:-35174325 MsG0180002232.01.T01:CDS
TCAGAAACAACAGCAAGTAC+TGG 0.445349 1:-35171654 MsG0180002232.01.T01:CDS
GGCATCAGCATGTGCTCTCT+GGG 0.448646 1:-35171808 MsG0180002232.01.T01:CDS
ACCTGCTGCTCGTGACCAAT+AGG 0.454851 1:+35172976 None:intergenic
GATGCTTTAAGGAATAGATC+AGG 0.456030 1:-35173147 MsG0180002232.01.T01:CDS
GCATCAGAGATAGCTTGTTC+CGG 0.460936 1:-35171294 MsG0180002232.01.T01:CDS
CTTAAAGCATCAGTGGGACT+TGG 0.466899 1:+35173159 None:intergenic
GTTTACTAGTGCAAGGAACT+TGG 0.467995 1:+35171627 None:intergenic
TCTTAGTCTGATCCATAGGT+TGG 0.470108 1:+35170106 None:intergenic
ACCCTGTTCTTTACCTTCGT+CGG 0.471244 1:+35173923 None:intergenic
TTTACCTGAAAATCCGATCA+AGG 0.472813 1:+35173856 None:intergenic
CAGAGATAGCTTGTTCCGGC+TGG 0.473135 1:-35171290 MsG0180002232.01.T01:CDS
CAGTGCAGCTAAAATTGATC+AGG 0.475398 1:-35174248 MsG0180002232.01.T01:CDS
TAGAATGACTTTGAATTTGT+GGG 0.479013 1:+35171585 None:intergenic
ACGGGCGACAGTTCGATCAA+TGG 0.480071 1:+35170329 None:intergenic
ACAGAAGAGACCACAGAGAA+TGG 0.481703 1:-35173972 MsG0180002232.01.T01:intron
TCTTCACTTGCCTCTGGAAA+CGG 0.482423 1:+35174451 None:intergenic
TTGAAGAAACCATATTGTGC+AGG 0.486319 1:-35171463 MsG0180002232.01.T01:CDS
GCCTATTGGTCACGAGCAGC+AGG 0.486485 1:-35172977 MsG0180002232.01.T01:intron
TTGTTAAGCTTACACACAGC+TGG 0.488901 1:+35174397 None:intergenic
CTGTTCTTAGTCTGATCCAT+AGG 0.489070 1:+35170102 None:intergenic
TTGATAATTCTGATGACCTC+TGG 0.501202 1:-35173230 MsG0180002232.01.T01:CDS
ACCTCACGGGAAAGCTCACT+TGG 0.504660 1:+35170208 None:intergenic
AATCAACAACTTTCTCACAT+TGG 0.505289 1:-35170159 MsG0180002232.01.T01:CDS
TCTGATATGTTTCAGGTCCT+AGG 0.507149 1:+35171918 None:intergenic
GGGTGGCATATTTGAGCGAC+GGG 0.507311 1:+35171605 None:intergenic
GCGTTGCACTTTGTGCCAGC+CGG 0.508304 1:+35171275 None:intergenic
ATTCAAAGTCATTCTAGTGA+TGG 0.509606 1:-35171578 MsG0180002232.01.T01:CDS
TAATTTCCTGTTAACTCCAC+AGG 0.509907 1:+35170291 None:intergenic
GGAGATAGAAGTAAGCCTAT+TGG 0.522652 1:-35172991 MsG0180002232.01.T01:CDS
GAACATCTTTCTTCATTGAG+AGG 0.523735 1:+35170029 None:intergenic
TTCAAAGTCATTCTAGTGAT+GGG 0.526023 1:-35171577 MsG0180002232.01.T01:CDS
CAGAAACAACAGCAAGTACT+GGG 0.527304 1:-35171653 MsG0180002232.01.T01:CDS
AAGAGACCACAGAGAATGGA+AGG 0.528000 1:-35173968 MsG0180002232.01.T01:CDS
GCCTCAAACTATGACTCCTC+AGG 0.528024 1:-35171729 MsG0180002232.01.T01:CDS
TGAGAGGCTTCAAGCTCCGG+TGG 0.529498 1:+35170045 None:intergenic
ATGCTAACACAGTTTCAGTC+AGG 0.532527 1:-35171839 MsG0180002232.01.T01:CDS
AATGGAGGACAACTCGCCTC+AGG 0.533027 1:-35174307 MsG0180002232.01.T01:CDS
GTTGTCCTCCATTATTGTCA+AGG 0.533277 1:+35174317 None:intergenic
GCTAATATAATATGGGATGA+AGG 0.533476 1:-35174499 MsG0180002232.01.T01:CDS
ACACACAACCGCTGATAATG+TGG 0.533964 1:-35173022 MsG0180002232.01.T01:CDS
TGTTCTTCTTTGATTTCCAA+AGG 0.534602 1:+35173123 None:intergenic
CTCCTCTTGTAAGCACCTCA+CGG 0.538906 1:+35170194 None:intergenic
CGAGGTGAACTTAGCAAACT+CGG 0.541278 1:-35174196 MsG0180002232.01.T01:intron
GTGGGACTTGGTGTGTTCAA+TGG 0.542667 1:+35173171 None:intergenic
GGGCAACCAAATCAACTCCT+AGG 0.545576 1:-35171935 MsG0180002232.01.T01:CDS
AGGTCTATGAAAGAGTAAAC+GGG 0.548734 1:+35170311 None:intergenic
TCTGGGTATGAAACATCTGC+TGG 0.554617 1:-35171791 MsG0180002232.01.T01:CDS
TCCTCTTGTAAGCACCTCAC+GGG 0.556291 1:+35170195 None:intergenic
TGGGTGGCATATTTGAGCGA+CGG 0.557181 1:+35171604 None:intergenic
GGAGTCGCACATTTCAACTA+AGG 0.558889 1:-35170256 MsG0180002232.01.T01:CDS
TCCCGTGAGGTGCTTACAAG+AGG 0.558958 1:-35170196 MsG0180002232.01.T01:CDS
TACTAGTGCAAGGAACTTGG+TGG 0.564162 1:+35171630 None:intergenic
ATAGGTTGGACCTCAAAAGA+TGG 0.564515 1:+35170120 None:intergenic
GATTATGACTGGGCTAACAT+AGG 0.566174 1:-35173891 MsG0180002232.01.T01:CDS
ACAACTCGCCTCAGGATATG+TGG 0.569743 1:-35174299 MsG0180002232.01.T01:CDS
GACTGAAACTGTGTTAGCAT+TGG 0.570733 1:+35171842 None:intergenic
GCTGATAATGTGGAATGTGC+TGG 0.572272 1:-35173012 MsG0180002232.01.T01:CDS
TTGGTCTTCTTCAGCAACAT+CGG 0.578822 1:-35172020 MsG0180002232.01.T01:CDS
GAACATCATAAATCCATATG+TGG 0.579709 1:-35171897 MsG0180002232.01.T01:CDS
AGTCCTTTGAAAAGTTATGC+GGG 0.588913 1:-35171761 MsG0180002232.01.T01:CDS
ATATGGGATGAAGGAGGTGA+GGG 0.590606 1:-35174490 MsG0180002232.01.T01:CDS
GCTTCAGGATGTTATATCAA+AGG 0.593187 1:-35171441 MsG0180002232.01.T01:intron
TTTACTCTTTCATAGACCTG+TGG 0.593278 1:-35170307 MsG0180002232.01.T01:CDS
CAGAATTATCAAGACTTGCA+TGG 0.593394 1:+35173241 None:intergenic
AAAGTCAAAGATAAAACAAG+AGG 0.596219 1:-35172071 MsG0180002232.01.T01:CDS
TGGTTGCCCAAGAATTGAAG+AGG 0.600589 1:+35171949 None:intergenic
TCTATTCCTTAAAGCATCAG+TGG 0.602291 1:+35173152 None:intergenic
GAGTCCTTTGAAAAGTTATG+CGG 0.609075 1:-35171762 MsG0180002232.01.T01:CDS
AATATGGGATGAAGGAGGTG+AGG 0.612946 1:-35174491 MsG0180002232.01.T01:CDS
AGCATCCCTTCCATTCTCTG+TGG 0.614891 1:+35173962 None:intergenic
GTGTTAGCATTGGCATAGCA+GGG 0.616825 1:+35171852 None:intergenic
AAGTCAAAGATAAAACAAGA+GGG 0.616841 1:-35172070 MsG0180002232.01.T01:CDS
ATGCTTTAAGGAATAGATCA+GGG 0.618514 1:-35173146 MsG0180002232.01.T01:CDS
GGTTGCCCAAGAATTGAAGA+GGG 0.618924 1:+35171950 None:intergenic
TCATATTGTGCCGTTTCCAG+AGG 0.620272 1:-35174461 MsG0180002232.01.T01:CDS
CTATTCCTTAAAGCATCAGT+GGG 0.628176 1:+35173153 None:intergenic
GCGACGGGTTTACTAGTGCA+AGG 0.628579 1:+35171620 None:intergenic
AATATAATATGGGATGAAGG+AGG 0.632268 1:-35174496 MsG0180002232.01.T01:CDS
TGGCACAAAGTGCAACGCAA+CGG 0.633011 1:-35171270 MsG0180002232.01.T01:CDS
GGAGATGATTGTAACACAGA+AGG 0.635671 1:+35171971 None:intergenic
AGAAAATGCATCTAACCCAC+CGG 0.636962 1:-35170061 MsG0180002232.01.T01:CDS
ACTAAGAACAGTCTCAGCAT+AGG 0.640882 1:-35170090 MsG0180002232.01.T01:CDS
AGGAGTCATAGTTTGAGGCA+CGG 0.641324 1:+35171733 None:intergenic
GAGAGGCTTCAAGCTCCGGT+GGG 0.642429 1:+35170046 None:intergenic
AGCACATTCCACATTATCAG+CGG 0.644887 1:+35173014 None:intergenic
AGAGACCACAGAGAATGGAA+GGG 0.649874 1:-35173967 MsG0180002232.01.T01:CDS
ACCAAGTGAGCTTTCCCGTG+AGG 0.654971 1:-35170209 MsG0180002232.01.T01:CDS
ACTGAACTTTCTAAATATCG+AGG 0.661650 1:-35174214 MsG0180002232.01.T01:CDS
AATGACTTTGAATTTGTGGG+TGG 0.666637 1:+35171588 None:intergenic
CTGTGTGTAAGCTTAACAAG+CGG 0.671318 1:-35174393 MsG0180002232.01.T01:CDS
TGAGTTTGCCACATATCCTG+AGG 0.676069 1:+35174291 None:intergenic
TCGAACCTTGACAATAATGG+AGG 0.677740 1:-35174322 MsG0180002232.01.T01:CDS
AGTCAAAGATAAAACAAGAG+GGG 0.681406 1:-35172069 MsG0180002232.01.T01:CDS
AAAAGTACCAGTTGAAAACA+CGG 0.682824 1:-35172096 MsG0180002232.01.T01:CDS
TGGACCTCAAAAGATGGACA+AGG 0.698672 1:+35170126 None:intergenic
GCCGACGAAGGTAAAGAACA+GGG 0.703659 1:-35173924 MsG0180002232.01.T01:CDS
TCACATCTTTAGCAGACCAG+AGG 0.711109 1:+35173214 None:intergenic
GGGAGGTTACCATAAAACGA+AGG 0.728180 1:+35171872 None:intergenic
TTAGCATTGGCATAGCAGGG+AGG 0.754765 1:+35171855 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAAAAAAAAGTTC+CGG - Chr1:35171167-35171186 MsG0180002232.01.T01:intron 10.0%
!! TATTAGATATAGAATAATAT+AGG + Chr1:35170736-35170755 None:intergenic 10.0%
!!! AGATTATCAAATAAATTTTA+TGG + Chr1:35173833-35173852 None:intergenic 10.0%
!! AAAATAACAGAATAAATTCT+TGG + Chr1:35172420-35172439 None:intergenic 15.0%
!!! CATTATTTTTCATATTATGA+CGG + Chr1:35170514-35170533 None:intergenic 15.0%
!!! TGGATATCAAATAAATTTTA+TGG + Chr1:35173813-35173832 None:intergenic 15.0%
!! AAAATCATTCAAAGTGAAAA+AGG - Chr1:35170992-35171011 MsG0180002232.01.T01:intron 20.0%
!! AACATTTATACAATTAGGAA+TGG + Chr1:35170564-35170583 None:intergenic 20.0%
!! ATAAAAGTCTTGGATTTATT+TGG - Chr1:35170792-35170811 MsG0180002232.01.T01:intron 20.0%
!! GTAAGATCCTAAATTTAAAA+TGG + Chr1:35172053-35172072 None:intergenic 20.0%
!! TGTCAAACATTTATACAATT+AGG + Chr1:35170569-35170588 None:intergenic 20.0%
!! TTCCAAAAGATAAACTTATT+GGG - Chr1:35171831-35171850 MsG0180002232.01.T01:CDS 20.0%
!! TTTCCAAAAGATAAACTTAT+TGG - Chr1:35171830-35171849 MsG0180002232.01.T01:CDS 20.0%
!!! AGTTTATCTTTTGGAAAATT+TGG + Chr1:35171827-35171846 None:intergenic 20.0%
!!! TAAATAAGAGTATAAGACAT+TGG - Chr1:35173533-35173552 MsG0180002232.01.T01:intron 20.0%
!!! TCTGATACCATTTTAAATTT+AGG - Chr1:35172043-35172062 MsG0180002232.01.T01:CDS 20.0%
! AAAGTCAAAGATAAAACAAG+AGG - Chr1:35172487-35172506 MsG0180002232.01.T01:intron 25.0%
! AAGTCAAAGATAAAACAAGA+GGG - Chr1:35172488-35172507 MsG0180002232.01.T01:intron 25.0%
! ACCAAAACAGTGTATATTAT+TGG - Chr1:35173703-35173722 MsG0180002232.01.T01:intron 25.0%
! ACTTACATTTACATCAGATT+CGG - Chr1:35173884-35173903 MsG0180002232.01.T01:CDS 25.0%
! AGAAAATTGAAAAATTGAGG+CGG - Chr1:35172852-35172871 MsG0180002232.01.T01:intron 25.0%
! AGGAGAAAATTGAAAAATTG+AGG - Chr1:35172849-35172868 MsG0180002232.01.T01:intron 25.0%
! CACATATAATGAAAGTTAAG+GGG + Chr1:35171127-35171146 None:intergenic 25.0%
! CAGTATGATTACTTTATCTA+TGG - Chr1:35173493-35173512 MsG0180002232.01.T01:intron 25.0%
! CATTATGATCATAAAAGTCT+TGG - Chr1:35170782-35170801 MsG0180002232.01.T01:intron 25.0%
! GAAATATTATGAATCACTCT+TGG + Chr1:35173563-35173582 None:intergenic 25.0%
! GCACATATAATGAAAGTTAA+GGG + Chr1:35171128-35171147 None:intergenic 25.0%
! TAAACTAGATAGCATAAACT+AGG + Chr1:35171788-35171807 None:intergenic 25.0%
! TAACAGAATAAATTCTTGGA+TGG + Chr1:35172416-35172435 None:intergenic 25.0%
! TAGAATGACTTTGAATTTGT+GGG + Chr1:35172976-35172995 None:intergenic 25.0%
! TCTTATCTAGTTATCTTACA+AGG + Chr1:35171897-35171916 None:intergenic 25.0%
! TGAATTTCCAAAGTCTAAAA+TGG - Chr1:35170828-35170847 MsG0180002232.01.T01:intron 25.0%
! TGTGATCATTTAAACAACAA+AGG + Chr1:35173981-35174000 None:intergenic 25.0%
! TTACTACTTAAACTAGGAAA+CGG - Chr1:35171046-35171065 MsG0180002232.01.T01:intron 25.0%
! TTATTGGAATTAAACTGACT+AGG - Chr1:35173719-35173738 MsG0180002232.01.T01:intron 25.0%
! TTGACACAATATTATGTCAA+GGG + Chr1:35172367-35172386 None:intergenic 25.0%
! TTTCACAGGAATAAATTTGA+AGG + Chr1:35170932-35170951 None:intergenic 25.0%
! TTTCCTAGTTTAAGTAGTAA+AGG + Chr1:35171046-35171065 None:intergenic 25.0%
!! AAAGATTTGCAGGATTTTTA+TGG - Chr1:35172512-35172531 MsG0180002232.01.T01:intron 25.0%
!! AACCCAATAAGTTTATCTTT+TGG + Chr1:35171836-35171855 None:intergenic 25.0%
!! AGAAATCTTTTCGTAGTTAA+GGG + Chr1:35171487-35171506 None:intergenic 25.0%
!! ATACTTTATAAGCTCTTTTC+AGG - Chr1:35171924-35171943 MsG0180002232.01.T01:CDS 25.0%
!! ATTGGGTTATCTTAGATTTT+GGG - Chr1:35171848-35171867 MsG0180002232.01.T01:CDS 25.0%
!! ATTTTTCATATTATGACGGT+GGG + Chr1:35170510-35170529 None:intergenic 25.0%
!! GTACTAAGATCTTCAATTTT+AGG + Chr1:35173013-35173032 None:intergenic 25.0%
!! TATTGGGTTATCTTAGATTT+TGG - Chr1:35171847-35171866 MsG0180002232.01.T01:CDS 25.0%
!! TATTTTTCATATTATGACGG+TGG + Chr1:35170511-35170530 None:intergenic 25.0%
!! TCCAATAATATACACTGTTT+TGG + Chr1:35173707-35173726 None:intergenic 25.0%
!!! AACATATTGATTTTAGTACG+TGG - Chr1:35173630-35173649 MsG0180002232.01.T01:intron 25.0%
!!! AATTTTTCAATTTTCTCCTG+AGG + Chr1:35172848-35172867 None:intergenic 25.0%
!!! TCAGCTTGCTAATATAATAT+GGG - Chr1:35170052-35170071 MsG0180002232.01.T01:CDS 25.0%
!!! TCTATGGTTGATAATTTCAA+AGG - Chr1:35173509-35173528 MsG0180002232.01.T01:intron 25.0%
!!! TGAAAATGGGTTTTACTATA+GGG - Chr1:35173760-35173779 MsG0180002232.01.T01:intron 25.0%
!!! TTCAGCTTGCTAATATAATA+TGG - Chr1:35170051-35170070 MsG0180002232.01.T01:CDS 25.0%
AAACAAGAAAGAAGTGAATC+AGG - Chr1:35170136-35170155 MsG0180002232.01.T01:CDS 30.0%
AACTAGGAAGCAATTATAGA+AGG + Chr1:35171772-35171791 None:intergenic 30.0%
AACTGTAAAAAAGTTTGCCT+CGG + Chr1:35173224-35173243 None:intergenic 30.0%
AAGTGATGAATACAACAGTT+AGG + Chr1:35170869-35170888 None:intergenic 30.0%
AATATAATATGGGATGAAGG+AGG - Chr1:35170062-35170081 MsG0180002232.01.T01:CDS 30.0%
AATATGTTCCATGTATTACC+AGG + Chr1:35173618-35173637 None:intergenic 30.0%
AATCAACAACTTTCTCACAT+TGG - Chr1:35174399-35174418 MsG0180002232.01.T01:CDS 30.0%
AATTGCATTTCAGCATCTTA+TGG - Chr1:35172258-35172277 MsG0180002232.01.T01:intron 30.0%
ACTGAACTTTCTAAATATCG+AGG - Chr1:35170344-35170363 MsG0180002232.01.T01:CDS 30.0%
AGACCTTTACTACTTAAACT+AGG - Chr1:35171040-35171059 MsG0180002232.01.T01:intron 30.0%
AGGAAATTATTCTGACAAAC+TGG - Chr1:35174281-35174300 MsG0180002232.01.T01:CDS 30.0%
AGTCAAAGATAAAACAAGAG+GGG - Chr1:35172489-35172508 MsG0180002232.01.T01:intron 30.0%
ATAGGGACTAAACTGAAAAT+GGG - Chr1:35173747-35173766 MsG0180002232.01.T01:intron 30.0%
ATCAACAACTTTCTCACATT+GGG - Chr1:35174400-35174419 MsG0180002232.01.T01:CDS 30.0%
ATCTGAATCATACAGTCTAA+AGG + Chr1:35171688-35171707 None:intergenic 30.0%
ATGATGTTCTGATATGTTTC+AGG + Chr1:35172650-35172669 None:intergenic 30.0%
ATTCAAAGTCATTCTAGTGA+TGG - Chr1:35172980-35172999 MsG0180002232.01.T01:CDS 30.0%
CAATTGTTTACTCTTTACTC+CGG + Chr1:35171189-35171208 None:intergenic 30.0%
CTAGAATGACTTTGAATTTG+TGG + Chr1:35172977-35172996 None:intergenic 30.0%
CTGTATGATTCAGATATGTT+AGG - Chr1:35171693-35171712 MsG0180002232.01.T01:CDS 30.0%
CTTAACTACGAAAAGATTTC+TGG - Chr1:35171486-35171505 MsG0180002232.01.T01:CDS 30.0%
CTTGACACAATATTATGTCA+AGG + Chr1:35172368-35172387 None:intergenic 30.0%
CTTGACATAATATTGTGTCA+AGG - Chr1:35172366-35172385 MsG0180002232.01.T01:intron 30.0%
GAACATCATAAATCCATATG+TGG - Chr1:35172661-35172680 MsG0180002232.01.T01:intron 30.0%
GAATCATCTTGTTCAATTAG+AGG + Chr1:35173040-35173059 None:intergenic 30.0%
GAATCTGATGTAAATGTAAG+TGG + Chr1:35173885-35173904 None:intergenic 30.0%
GCTAATATAATATGGGATGA+AGG - Chr1:35170059-35170078 MsG0180002232.01.T01:CDS 30.0%
GGCACATATAATGAAAGTTA+AGG + Chr1:35171129-35171148 None:intergenic 30.0%
GTGATAAAATTGCTAATTGC+TGG - Chr1:35170396-35170415 MsG0180002232.01.T01:intron 30.0%
GTTTCCTTGCATACTAATTT+GGG - Chr1:35173185-35173204 MsG0180002232.01.T01:CDS 30.0%
TACTACTTAAACTAGGAAAC+GGG - Chr1:35171047-35171066 MsG0180002232.01.T01:intron 30.0%
TAGAGAACTGAATAATAGAC+AGG + Chr1:35171629-35171648 None:intergenic 30.0%
TATAATGAAAGTTAAGGGGA+AGG + Chr1:35171123-35171142 None:intergenic 30.0%
TATCTAGTTATCTTACAAGG+CGG + Chr1:35171894-35171913 None:intergenic 30.0%
TCAGTTCTCTATTTGTATAG+TGG - Chr1:35171638-35171657 MsG0180002232.01.T01:CDS 30.0%
TGAAGGAACTTAAACTAAGA+TGG + Chr1:35170915-35170934 None:intergenic 30.0%
TGTTTCCTTGCATACTAATT+TGG - Chr1:35173184-35173203 MsG0180002232.01.T01:CDS 30.0%
TTCAAAGTCATTCTAGTGAT+GGG - Chr1:35172981-35173000 MsG0180002232.01.T01:CDS 30.0%
TTCTCAATAGATTATGAGTG+TGG - Chr1:35172168-35172187 MsG0180002232.01.T01:intron 30.0%
TTGTATGATCCAGATATGTT+AGG - Chr1:35171719-35171738 MsG0180002232.01.T01:CDS 30.0%
! AAACTGACTAGGTTTTCATA+GGG - Chr1:35173730-35173749 MsG0180002232.01.T01:intron 30.0%
! AGTAGGTACTATTTTACTGT+AGG + Chr1:35173412-35173431 None:intergenic 30.0%
! ATCAAAATCAGTTTTCGTCT+CGG + Chr1:35170198-35170217 None:intergenic 30.0%
! CAGAAATCTTTTCGTAGTTA+AGG + Chr1:35171488-35171507 None:intergenic 30.0%
! TAAACTGACTAGGTTTTCAT+AGG - Chr1:35173729-35173748 MsG0180002232.01.T01:intron 30.0%
! TAACTTTTCAAAGGACTCAA+CGG + Chr1:35172794-35172813 None:intergenic 30.0%
! TCACACATTGACTATAAAGA+AGG + Chr1:35172137-35172156 None:intergenic 30.0%
! TCACATTTTGTGACTAAAGT+AGG - Chr1:35173996-35174015 MsG0180002232.01.T01:intron 30.0%
! TGCAGGATTTTTATGGTAAT+TGG - Chr1:35172519-35172538 MsG0180002232.01.T01:intron 30.0%
! TGTTCTTCTTTGATTTCCAA+AGG + Chr1:35171438-35171457 None:intergenic 30.0%
! TTAGTCTTTGTCTCTTACAA+CGG - Chr1:35171231-35171250 MsG0180002232.01.T01:CDS 30.0%
!! AAAAGTACCAGTTGAAAACA+CGG - Chr1:35172462-35172481 MsG0180002232.01.T01:intron 30.0%
!! AAAAGTTGATGATTGTCAGT+GGG - Chr1:35171090-35171109 MsG0180002232.01.T01:intron 30.0%
!! ACTGATTTTGATGGAAAACT+AGG - Chr1:35170206-35170225 MsG0180002232.01.T01:CDS 30.0%
!! ATGCTTTAAGGAATAGATCA+GGG - Chr1:35171412-35171431 MsG0180002232.01.T01:intron 30.0%
!! CTGAAAATGGGTTTTACTAT+AGG - Chr1:35173759-35173778 MsG0180002232.01.T01:intron 30.0%
!! GAAAATGGGTTTTACTATAG+GGG - Chr1:35173761-35173780 MsG0180002232.01.T01:intron 30.0%
!! TAAAAGTTGATGATTGTCAG+TGG - Chr1:35171089-35171108 MsG0180002232.01.T01:intron 30.0%
!! TGATTTTAGTACGTGGAATA+AGG - Chr1:35173637-35173656 MsG0180002232.01.T01:intron 30.0%
!! TGATTTTGCTGATTATGACT+GGG - Chr1:35170657-35170676 MsG0180002232.01.T01:intron 30.0%
AAATTGAAAAATTGAGGCGG+CGG - Chr1:35172855-35172874 MsG0180002232.01.T01:intron 35.0%
AACAAGGATCAAAGTACGTT+TGG - Chr1:35173674-35173693 MsG0180002232.01.T01:intron 35.0%
AATGACTTTGAATTTGTGGG+TGG + Chr1:35172973-35172992 None:intergenic 35.0%
AATTCTTACTCTTGCATGAG+AGG + Chr1:35172211-35172230 None:intergenic 35.0%
ACAAGGATCAAAGTACGTTT+GGG - Chr1:35173675-35173694 MsG0180002232.01.T01:intron 35.0%
ACTACTTAAACTAGGAAACG+GGG - Chr1:35171048-35171067 MsG0180002232.01.T01:intron 35.0%
ACTGTAAAAAAGTTTGCCTC+GGG + Chr1:35173223-35173242 None:intergenic 35.0%
AGAACTGAATAATAGACAGG+TGG + Chr1:35171626-35171645 None:intergenic 35.0%
AGCAATGATGACCCTATATT+TGG - Chr1:35171294-35171313 MsG0180002232.01.T01:CDS 35.0%
AGGTCTATGAAAGAGTAAAC+GGG + Chr1:35174250-35174269 None:intergenic 35.0%
AGTTCGAACCTTGACAATAA+TGG - Chr1:35170233-35170252 MsG0180002232.01.T01:CDS 35.0%
AGTTTACTTAGCCTAGCTAA+CGG + Chr1:35173928-35173947 None:intergenic 35.0%
AGTTTCAGTCAGGAAATCTT+AGG - Chr1:35172729-35172748 MsG0180002232.01.T01:intron 35.0%
ATTCTTACTCTTGCATGAGA+GGG + Chr1:35172210-35172229 None:intergenic 35.0%
ATTTCCAATGTTACCCATCA+TGG + Chr1:35171151-35171170 None:intergenic 35.0%
CAGAATTATCAAGACTTGCA+TGG + Chr1:35171320-35171339 None:intergenic 35.0%
CAGGTCTATGAAAGAGTAAA+CGG + Chr1:35174251-35174270 None:intergenic 35.0%
CATAGGGACTAAACTGAAAA+TGG - Chr1:35173746-35173765 MsG0180002232.01.T01:intron 35.0%
CTTTATTGTTGCAGCTACAA+CGG + Chr1:35170971-35170990 None:intergenic 35.0%
GAATCAATCCTGGTAATACA+TGG - Chr1:35173607-35173626 MsG0180002232.01.T01:intron 35.0%
GATGAATACAACAGTTAGGA+CGG + Chr1:35170865-35170884 None:intergenic 35.0%
GATGCTGAAATGCAATTAGA+AGG + Chr1:35172255-35172274 None:intergenic 35.0%
GCTTCAGGATGTTATATCAA+AGG - Chr1:35173117-35173136 MsG0180002232.01.T01:CDS 35.0%
GCTTTCTTCTCTTGCAAAAA+CGG + Chr1:35173366-35173385 None:intergenic 35.0%
GGACTAAAGTCAAAACAACA+AGG - Chr1:35173658-35173677 MsG0180002232.01.T01:intron 35.0%
GTACGGGAAAACTAGTTATT+AGG + Chr1:35174149-35174168 None:intergenic 35.0%
GTCACAGTAATTGAAGTAGT+AGG + Chr1:35173429-35173448 None:intergenic 35.0%
TAATTTCCTGTTAACTCCAC+AGG + Chr1:35174270-35174289 None:intergenic 35.0%
TCATTATATGTGCCCATGAT+GGG - Chr1:35171135-35171154 MsG0180002232.01.T01:intron 35.0%
TGCAAGACAAACACACTTAA+CGG + Chr1:35174075-35174094 None:intergenic 35.0%
TGCTCATATTGAATCAATCC+TGG - Chr1:35173597-35173616 MsG0180002232.01.T01:intron 35.0%
TTCATTATATGTGCCCATGA+TGG - Chr1:35171134-35171153 MsG0180002232.01.T01:intron 35.0%
TTGAAGAAACCATATTGTGC+AGG - Chr1:35173095-35173114 MsG0180002232.01.T01:CDS 35.0%
TTGTGACTAAAGTAGGACTT+CGG - Chr1:35174003-35174022 MsG0180002232.01.T01:intron 35.0%
TTTACCTGAAAATCCGATCA+AGG + Chr1:35170705-35170724 None:intergenic 35.0%
TTTACTCTTTCATAGACCTG+TGG - Chr1:35174251-35174270 MsG0180002232.01.T01:CDS 35.0%
TTTCCAATGTTACCCATCAT+GGG + Chr1:35171150-35171169 None:intergenic 35.0%
! AACACACTTAACGGTTTTAC+TGG + Chr1:35174066-35174085 None:intergenic 35.0%
! AGTCCTTTGAAAAGTTATGC+GGG - Chr1:35172797-35172816 MsG0180002232.01.T01:intron 35.0%
! CATTGACTATAAAGAAGGCT+TGG + Chr1:35172132-35172151 None:intergenic 35.0%
! CTATTCCTTAAAGCATCAGT+GGG + Chr1:35171408-35171427 None:intergenic 35.0%
! GAGTCCTTTGAAAAGTTATG+CGG - Chr1:35172796-35172815 MsG0180002232.01.T01:intron 35.0%
! GTAGGTTTTCTAACCTGTTT+TGG + Chr1:35173394-35173413 None:intergenic 35.0%
! GTGTTTTCAACTGGTACTTT+TGG + Chr1:35172463-35172482 None:intergenic 35.0%
! GTTTGGTCCATTTTAGACTT+TGG + Chr1:35170838-35170857 None:intergenic 35.0%
! TCAAAATCAGTTTTCGTCTC+GGG + Chr1:35170197-35170216 None:intergenic 35.0%
! TCTATTCCTTAAAGCATCAG+TGG + Chr1:35171409-35171428 None:intergenic 35.0%
! TTGATAATTCTGATGACCTC+TGG - Chr1:35171328-35171347 MsG0180002232.01.T01:intron 35.0%
! TTTTATCAAAATGCCGACGA+AGG - Chr1:35170622-35170641 MsG0180002232.01.T01:intron 35.0%
! TTTTCTATACTCTGACAAGC+AGG + Chr1:35171513-35171532 None:intergenic 35.0%
!! ACATCAGATTCGGTTTTACT+TGG - Chr1:35173894-35173913 MsG0180002232.01.T01:CDS 35.0%
!! ACTTTTTCCGTGTTTTCAAC+TGG + Chr1:35172472-35172491 None:intergenic 35.0%
!! GAAGTTTTGATGACCTTGAT+CGG - Chr1:35170689-35170708 MsG0180002232.01.T01:intron 35.0%
!! GAGACGAAAACTGATTTTGA+TGG - Chr1:35170197-35170216 MsG0180002232.01.T01:CDS 35.0%
!! GATGCTTTAAGGAATAGATC+AGG - Chr1:35171411-35171430 MsG0180002232.01.T01:intron 35.0%
!! GTGATTTTGCTGATTATGAC+TGG - Chr1:35170656-35170675 MsG0180002232.01.T01:intron 35.0%
AAGAAAGCAGTAGCCAAAAC+AGG - Chr1:35173378-35173397 MsG0180002232.01.T01:intron 40.0%
ACTAAGAACAGTCTCAGCAT+AGG - Chr1:35174468-35174487 MsG0180002232.01.T01:CDS 40.0%
AGAAAATGCATCTAACCCAC+CGG - Chr1:35174497-35174516 MsG0180002232.01.T01:CDS 40.0%
AGACAGGTTCCTAACATATC+TGG + Chr1:35171731-35171750 None:intergenic 40.0%
AGACTTGCATGGCCAAATAT+AGG + Chr1:35171309-35171328 None:intergenic 40.0%
AGCACATTCCACATTATCAG+CGG + Chr1:35171547-35171566 None:intergenic 40.0%
AGCTAGGCTAAGTAAACTGT+TGG - Chr1:35173930-35173949 MsG0180002232.01.T01:CDS 40.0%
ATATCTGTGTGATACCAGCA+TGG + Chr1:35174175-35174194 None:intergenic 40.0%
ATGCTAACACAGTTTCAGTC+AGG - Chr1:35172719-35172738 MsG0180002232.01.T01:intron 40.0%
ATGTCCAACACTATTGGTGA+GGG - Chr1:35171999-35172018 MsG0180002232.01.T01:CDS 40.0%
CAAGCATATGTCTGATAGCA+TGG - Chr1:35170756-35170775 MsG0180002232.01.T01:intron 40.0%
CAGAAACAACAGCAAGTACT+GGG - Chr1:35172905-35172924 MsG0180002232.01.T01:intron 40.0%
CAGTGCAGCTAAAATTGATC+AGG - Chr1:35170310-35170329 MsG0180002232.01.T01:CDS 40.0%
CATCTCCCTCTTCAATTCTT+GGG - Chr1:35172603-35172622 MsG0180002232.01.T01:intron 40.0%
CTGCACAAACAAAAACGCAT+AGG + Chr1:35170453-35170472 None:intergenic 40.0%
CTGTGTGTAAGCTTAACAAG+CGG - Chr1:35170165-35170184 MsG0180002232.01.T01:CDS 40.0%
CTGTTCTTAGTCTGATCCAT+AGG + Chr1:35174459-35174478 None:intergenic 40.0%
CTTGCATACTAATTTGGGCA+CGG - Chr1:35173190-35173209 MsG0180002232.01.T01:CDS 40.0%
GACTGAAACTGTGTTAGCAT+TGG + Chr1:35172719-35172738 None:intergenic 40.0%
GACTTGCATGGCCAAATATA+GGG + Chr1:35171308-35171327 None:intergenic 40.0%
GATTATGACTGGGCTAACAT+AGG - Chr1:35170667-35170686 MsG0180002232.01.T01:intron 40.0%
GCAAAGTGAGCAAAATAGAC+AGG + Chr1:35171747-35171766 None:intergenic 40.0%
GGAGATAGAAGTAAGCCTAT+TGG - Chr1:35171567-35171586 MsG0180002232.01.T01:CDS 40.0%
GGAGATGATTGTAACACAGA+AGG + Chr1:35172590-35172609 None:intergenic 40.0%
GTTGTCCTCCATTATTGTCA+AGG + Chr1:35170244-35170263 None:intergenic 40.0%
GTTTACTAGTGCAAGGAACT+TGG + Chr1:35172934-35172953 None:intergenic 40.0%
TCAAACAGATTGCACACAGA+AGG + Chr1:35172309-35172328 None:intergenic 40.0%
TCAGAAACAACAGCAAGTAC+TGG - Chr1:35172904-35172923 MsG0180002232.01.T01:intron 40.0%
TCATCTCCCTCTTCAATTCT+TGG - Chr1:35172602-35172621 MsG0180002232.01.T01:intron 40.0%
TCGAACCTTGACAATAATGG+AGG - Chr1:35170236-35170255 MsG0180002232.01.T01:CDS 40.0%
TCTTAGTCTGATCCATAGGT+TGG + Chr1:35174455-35174474 None:intergenic 40.0%
TGGATGATTTACCGTTAGCT+AGG - Chr1:35173914-35173933 MsG0180002232.01.T01:CDS 40.0%
TTAAGATCTTCACTTGCCTC+TGG + Chr1:35170116-35170135 None:intergenic 40.0%
TTCGTCTCTGTTTCAACATC+AGG + Chr1:35174207-35174226 None:intergenic 40.0%
TTGTTAAGCTTACACACAGC+TGG + Chr1:35170164-35170183 None:intergenic 40.0%
! ATAGGTTGGACCTCAAAAGA+TGG + Chr1:35174441-35174460 None:intergenic 40.0%
! ATGACCTTGATCGGATTTTC+AGG - Chr1:35170698-35170717 MsG0180002232.01.T01:intron 40.0%
! CAATAGTGTTGGACATGAAC+GGG + Chr1:35171995-35172014 None:intergenic 40.0%
! CCAATAGTGTTGGACATGAA+CGG + Chr1:35171996-35172015 None:intergenic 40.0%
! GAATCCTTGTCCATCTTTTG+AGG - Chr1:35174428-35174447 MsG0180002232.01.T01:CDS 40.0%
! GGCTAAGTAAACTGTTGGTT+CGG - Chr1:35173935-35173954 MsG0180002232.01.T01:CDS 40.0%
! TATCTTACAAGGCGGTTTTG+TGG + Chr1:35171886-35171905 None:intergenic 40.0%
! TATGTGGCACCTTCGTTTTA+TGG - Chr1:35172677-35172696 MsG0180002232.01.T01:intron 40.0%
! TCTGATATGTTTCAGGTCCT+AGG + Chr1:35172643-35172662 None:intergenic 40.0%
! TTGGTCTTCTTCAGCAACAT+CGG - Chr1:35172538-35172557 MsG0180002232.01.T01:intron 40.0%
!! ATCTTACAAGGCGGTTTTGT+GGG + Chr1:35171885-35171904 None:intergenic 40.0%
!! ATTCTTGGATGGCTTTGAGA+AGG + Chr1:35172405-35172424 None:intergenic 40.0%
!! CTATGCGTTTTTGTTTGTGC+AGG - Chr1:35170451-35170470 MsG0180002232.01.T01:intron 40.0%
!! GCTAAGTAAACTGTTGGTTC+GGG - Chr1:35173936-35173955 MsG0180002232.01.T01:CDS 40.0%
!! TAAAACGAAGGTGCCACATA+TGG + Chr1:35172677-35172696 None:intergenic 40.0%
!!! ATCTTTTGAGGTCCAACCTA+TGG - Chr1:35174440-35174459 MsG0180002232.01.T01:CDS 40.0%
!!! CTGATCAATTTTAGCTGCAC+TGG + Chr1:35170312-35170331 None:intergenic 40.0%
AAAGCCCTCACCAATAGTGT+TGG + Chr1:35172006-35172025 None:intergenic 45.0%
AACCATATTGTGCAGGCTTC+AGG - Chr1:35173102-35173121 MsG0180002232.01.T01:CDS 45.0%
AAGAGACCACAGAGAATGGA+AGG - Chr1:35170590-35170609 MsG0180002232.01.T01:intron 45.0%
AAGGAATAGATCAGGGCCTT+TGG - Chr1:35171419-35171438 MsG0180002232.01.T01:intron 45.0%
AATATGGGATGAAGGAGGTG+AGG - Chr1:35170067-35170086 MsG0180002232.01.T01:CDS 45.0%
ACAAGAGGGGAAAGATTTGC+AGG - Chr1:35172502-35172521 MsG0180002232.01.T01:intron 45.0%
ACAGAAGAGACCACAGAGAA+TGG - Chr1:35170586-35170605 MsG0180002232.01.T01:intron 45.0%
ACATGTTGACAGCGCAATCA+AGG + Chr1:35174123-35174142 None:intergenic 45.0%
ACCCTGTTCTTTACCTTCGT+CGG + Chr1:35170638-35170657 None:intergenic 45.0%
AGAGACCACAGAGAATGGAA+GGG - Chr1:35170591-35170610 MsG0180002232.01.T01:intron 45.0%
AGCAAACTCGGTACATCAAG+AGG - Chr1:35170374-35170393 MsG0180002232.01.T01:intron 45.0%
ATATGGGATGAAGGAGGTGA+GGG - Chr1:35170068-35170087 MsG0180002232.01.T01:CDS 45.0%
ATCCTGAAGCCTGCACAATA+TGG + Chr1:35173107-35173126 None:intergenic 45.0%
CAAGTCCCACTGATGCTTTA+AGG - Chr1:35171400-35171419 MsG0180002232.01.T01:intron 45.0%
CATAGACCTGTGGAGTTAAC+AGG - Chr1:35174261-35174280 MsG0180002232.01.T01:CDS 45.0%
CATGTCCAACACTATTGGTG+AGG - Chr1:35171998-35172017 MsG0180002232.01.T01:CDS 45.0%
CCGTTCATGTCCAACACTAT+TGG - Chr1:35171993-35172012 MsG0180002232.01.T01:CDS 45.0%
CGAGGTGAACTTAGCAAACT+CGG - Chr1:35170362-35170381 MsG0180002232.01.T01:intron 45.0%
CGTGCCCAAATTAGTATGCA+AGG + Chr1:35173192-35173211 None:intergenic 45.0%
GGAGTCGCACATTTCAACTA+AGG - Chr1:35174302-35174321 MsG0180002232.01.T01:CDS 45.0%
GGGAGGTTACCATAAAACGA+AGG + Chr1:35172689-35172708 None:intergenic 45.0%
GGTTGCCCAAGAATTGAAGA+GGG + Chr1:35172611-35172630 None:intergenic 45.0%
TACTAGTGCAAGGAACTTGG+TGG + Chr1:35172931-35172950 None:intergenic 45.0%
TAGCTGCACATAGGTTTCAC+AGG + Chr1:35170946-35170965 None:intergenic 45.0%
TCACATCTTTAGCAGACCAG+AGG + Chr1:35171347-35171366 None:intergenic 45.0%
TCCTGAGGAGTCATAGTTTG+AGG + Chr1:35172833-35172852 None:intergenic 45.0%
TCTGGGTATGAAACATCTGC+TGG - Chr1:35172767-35172786 MsG0180002232.01.T01:intron 45.0%
TGAGTTTGCCACATATCCTG+AGG + Chr1:35170270-35170289 None:intergenic 45.0%
TGATACCAGCATGGTACGTA+CGG + Chr1:35174166-35174185 None:intergenic 45.0%
TGGACCTCAAAAGATGGACA+AGG + Chr1:35174435-35174454 None:intergenic 45.0%
TGGTATCACACAGATATGCC+AGG - Chr1:35174178-35174197 MsG0180002232.01.T01:intron 45.0%
TGGTTGCCCAAGAATTGAAG+AGG + Chr1:35172612-35172631 None:intergenic 45.0%
TGTTTCAACATCAGGCATCC+TGG + Chr1:35174199-35174218 None:intergenic 45.0%
! ACACACAACCGCTGATAATG+TGG - Chr1:35171536-35171555 MsG0180002232.01.T01:CDS 45.0%
! AGGAGTCATAGTTTGAGGCA+CGG + Chr1:35172828-35172847 None:intergenic 45.0%
! CTTAAAGCATCAGTGGGACT+TGG + Chr1:35171402-35171421 None:intergenic 45.0%
! GAGCCCGCATAACTTTTCAA+AGG + Chr1:35172803-35172822 None:intergenic 45.0%
! GCTGATAATGTGGAATGTGC+TGG - Chr1:35171546-35171565 MsG0180002232.01.T01:CDS 45.0%
! GGTGAGGGCTTTATGAATCT+AGG - Chr1:35172014-35172033 MsG0180002232.01.T01:CDS 45.0%
! TCAGGTCCTAGGAGTTGATT+TGG + Chr1:35172632-35172651 None:intergenic 45.0%
! TCTTCACTTGCCTCTGGAAA+CGG + Chr1:35170110-35170129 None:intergenic 45.0%
!! CGGTTTTGTGGGATTGAGTT+AGG + Chr1:35171874-35171893 None:intergenic 45.0%
!! GCATCAGAGATAGCTTGTTC+CGG - Chr1:35173264-35173283 MsG0180002232.01.T01:CDS 45.0%
!! GTGTTAGCATTGGCATAGCA+GGG + Chr1:35172709-35172728 None:intergenic 45.0%
!! TCATATTGTGCCGTTTCCAG+AGG - Chr1:35170097-35170116 MsG0180002232.01.T01:CDS 45.0%
!! TGTGTTAGCATTGGCATAGC+AGG + Chr1:35172710-35172729 None:intergenic 45.0%
ACAACGGCATAGCTGCACAT+AGG + Chr1:35170955-35170974 None:intergenic 50.0%
ACAACTCGCCTCAGGATATG+TGG - Chr1:35170259-35170278 MsG0180002232.01.T01:CDS 50.0%
ACAGTTAGGACGGCAGAGTT+TGG + Chr1:35170855-35170874 None:intergenic 50.0%
AGCATCCCTCACCTACAAGT+CGG + Chr1:35172090-35172109 None:intergenic 50.0%
AGCATCCCTTCCATTCTCTG+TGG + Chr1:35170599-35170618 None:intergenic 50.0%
CATTGAGAGGCTTCAAGCTC+CGG + Chr1:35174519-35174538 None:intergenic 50.0%
CTCCTCTTGTAAGCACCTCA+CGG + Chr1:35174367-35174386 None:intergenic 50.0%
GATACCAGCATGGTACGTAC+GGG + Chr1:35174165-35174184 None:intergenic 50.0%
GCCGACGAAGGTAAAGAACA+GGG - Chr1:35170634-35170653 MsG0180002232.01.T01:intron 50.0%
GCCTCAAACTATGACTCCTC+AGG - Chr1:35172829-35172848 MsG0180002232.01.T01:intron 50.0%
GGGCAACCAAATCAACTCCT+AGG - Chr1:35172623-35172642 MsG0180002232.01.T01:intron 50.0%
TCCTCTTGTAAGCACCTCAC+GGG + Chr1:35174366-35174385 None:intergenic 50.0%
TGCCGACGAAGGTAAAGAAC+AGG - Chr1:35170633-35170652 MsG0180002232.01.T01:intron 50.0%
TGGCACAAAGTGCAACGCAA+CGG - Chr1:35173288-35173307 MsG0180002232.01.T01:intron 50.0%
TGGGTGGCATATTTGAGCGA+CGG + Chr1:35172957-35172976 None:intergenic 50.0%
! CACCTACAAGTCGGTTTCGT+GGG + Chr1:35172081-35172100 None:intergenic 50.0%
! TCACCTACAAGTCGGTTTCG+TGG + Chr1:35172082-35172101 None:intergenic 50.0%
! TTTTCCCGTACGTACCATGC+TGG - Chr1:35174158-35174177 MsG0180002232.01.T01:intron 50.0%
!! AACCCACGAAACCGACTTGT+AGG - Chr1:35172076-35172095 MsG0180002232.01.T01:CDS 50.0%
!! ACGAAACCGACTTGTAGGTG+AGG - Chr1:35172081-35172100 MsG0180002232.01.T01:CDS 50.0%
!! CGAAACCGACTTGTAGGTGA+GGG - Chr1:35172082-35172101 MsG0180002232.01.T01:CDS 50.0%
!! GTGCCCATGATGGGTAACAT+TGG - Chr1:35171144-35171163 MsG0180002232.01.T01:intron 50.0%
!! GTGGGACTTGGTGTGTTCAA+TGG + Chr1:35171390-35171409 None:intergenic 50.0%
!! TTAGCATTGGCATAGCAGGG+AGG + Chr1:35172706-35172725 None:intergenic 50.0%
AATGGAGGACAACTCGCCTC+AGG - Chr1:35170251-35170270 MsG0180002232.01.T01:CDS 55.0%
ACCAAGTGAGCTTTCCCGTG+AGG - Chr1:35174349-35174368 MsG0180002232.01.T01:CDS 55.0%
ACCTCACGGGAAAGCTCACT+TGG + Chr1:35174353-35174372 None:intergenic 55.0%
ACCTGCTGCTCGTGACCAAT+AGG + Chr1:35171585-35171604 None:intergenic 55.0%
ACGGGCGACAGTTCGATCAA+TGG + Chr1:35174232-35174251 None:intergenic 55.0%
AGGCATCAGCATGTGCTCTC+TGG - Chr1:35172749-35172768 MsG0180002232.01.T01:intron 55.0%
GGCATCAGCATGTGCTCTCT+GGG - Chr1:35172750-35172769 MsG0180002232.01.T01:intron 55.0%
GGGTGGCATATTTGAGCGAC+GGG + Chr1:35172956-35172975 None:intergenic 55.0%
! GCGACGGGTTTACTAGTGCA+AGG + Chr1:35172941-35172960 None:intergenic 55.0%
! TCCCGTGAGGTGCTTACAAG+AGG - Chr1:35174362-35174381 MsG0180002232.01.T01:CDS 55.0%
!! CAGAGATAGCTTGTTCCGGC+TGG - Chr1:35173268-35173287 MsG0180002232.01.T01:intron 55.0%
!! TTGGTTCGGGCTGTGCAGAA+TGG - Chr1:35173949-35173968 MsG0180002232.01.T01:CDS 55.0%
GAGAGGCTTCAAGCTCCGGT+GGG + Chr1:35174515-35174534 None:intergenic 60.0%
GCCTATTGGTCACGAGCAGC+AGG - Chr1:35171581-35171600 MsG0180002232.01.T01:CDS 60.0%
GCGTTGCACTTTGTGCCAGC+CGG + Chr1:35173286-35173305 None:intergenic 60.0%
TGAGAGGCTTCAAGCTCCGG+TGG + Chr1:35174516-35174535 None:intergenic 60.0%
TGGGCACGGCTTCAATCCCG+AGG - Chr1:35173204-35173223 MsG0180002232.01.T01:CDS 65.0%
GAGGCGGCGGCAGCAAATGC+AGG - Chr1:35172868-35172887 MsG0180002232.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 35170041 35174539 35170041 ID=MsG0180002232.01;Name=MsG0180002232.01
Chr1 mRNA 35170041 35174539 35170041 ID=MsG0180002232.01.T01;Parent=MsG0180002232.01;Name=MsG0180002232.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0.6|0.66|1|1|1|6|0|654
Chr1 exon 35174197 35174539 35174197 ID=MsG0180002232.01.T01:exon:2252;Parent=MsG0180002232.01.T01
Chr1 exon 35173861 35173990 35173861 ID=MsG0180002232.01.T01:exon:2251;Parent=MsG0180002232.01.T01
Chr1 exon 35172978 35173284 35172978 ID=MsG0180002232.01.T01:exon:2250;Parent=MsG0180002232.01.T01
Chr1 exon 35171442 35172128 35171442 ID=MsG0180002232.01.T01:exon:2249;Parent=MsG0180002232.01.T01
Chr1 exon 35171181 35171338 35171181 ID=MsG0180002232.01.T01:exon:2248;Parent=MsG0180002232.01.T01
Chr1 exon 35170041 35170380 35170041 ID=MsG0180002232.01.T01:exon:2247;Parent=MsG0180002232.01.T01
Chr1 CDS 35174197 35174539 35174197 ID=MsG0180002232.01.T01:cds;Parent=MsG0180002232.01.T01
Chr1 CDS 35173861 35173990 35173861 ID=MsG0180002232.01.T01:cds;Parent=MsG0180002232.01.T01
Chr1 CDS 35172978 35173284 35172978 ID=MsG0180002232.01.T01:cds;Parent=MsG0180002232.01.T01
Chr1 CDS 35171442 35172128 35171442 ID=MsG0180002232.01.T01:cds;Parent=MsG0180002232.01.T01
Chr1 CDS 35171181 35171338 35171181 ID=MsG0180002232.01.T01:cds;Parent=MsG0180002232.01.T01
Chr1 CDS 35170041 35170380 35170041 ID=MsG0180002232.01.T01:cds;Parent=MsG0180002232.01.T01
Gene Sequence

>MsG0180002232.01.T01

ATGGAAAATTTTCAGCTTGCTAATATAATATGGGATGAAGGAGGTGAGGGCGATGATCATATTGTGCCGTTTCCAGAGGCAAGTGAAGATCTTAAAAACAAGAAAGAAGTGAATCAGGAACCAGCTGTGTGTAAGCTTAACAAGCGGAAGCAACCCGAGACGAAAACTGATTTTGATGGAAAACTAGGAAGCAGTTCGAACCTTGACAATAATGGAGGACAACTCGCCTCAGGATATGTGGCAAACTCATGCTCTGACTTGTCTTTATCCAGTGCAGCTAAAATTGATCAGGATTCTCTGAGTACTGAACTTTCTAAATATCGAGGTGAACTTAGCAAACTCGAAGAGACCACAGAGAATGGAAGGGATGCTGAATTTTATCAAAATGCCGACGAAGGTAAAGAACAGGGTGATTTTGCTGATTATGACTGGGCTAACATAGGAAGTTTTGATGACCTTGATCGGATTTTCAGCAATGATGACCCTATATTTGGCCATGCAAGTCTTGATAATTCTGATGACCTCTGGTCTGCTAAAGATGTGAGTAGCAATCAAGCATCAGTGCCATTGAACACACCAAGTCCCACTGATGCTTTAAGGAATAGATCAGGGCCTTTGGAAATCAAAGAAGAACATGTTCACTGTAGTGATCAATCATTTTCCCTTAACTACGAAAAGATTTCTGGTCCTGCTTGTCAGAGTATAGAAAATTCACACACAACCGCTGATAATGTGGAATGTGCTGGAGATAGAAGTAAGCCTATTGGTCACGAGCAGCAGAGTTTTAGCCAAAAGTACCAGTTGAAAACACGGAAAAAGTCAAAGATAAAACAAGAGGGGAAAGATTTGCAGGATTTTTATGGTAATTGGTCTTCTTCAGCAACATCGGCAAGACAATTTGAGAGTCAATTGACACCTTCTGTGTTACAATCATCTCCCTCTTCAATTCTTGGGCAACCAAATCAACTCCTAGGACCTGAAACATATCAGAACATCATAAATCCATATGTGGCACCTTCGTTTTATGGTAACCTCCCTGCTATGCCAATGCTAACACAGTTTCAGTCAGGAAATCTTAGGCATCAGCATGTGCTCTCTGGGTATGAAACATCTGCTGGTCCGTTGAGTCCTTTGAAAAGTTATGCGGGCTCAGCCGTGCCTCAAACTATGACTCCTCAGGAGAAAATTGAAAAATTGAGGCGGCGGCAGCAAATGCAGGCAATGCTTGCTATTCAGAAACAACAGCAAGTACTGGGCCACCAAGTTCCTTGCACTAGTAAACCCGTCGCTCAAATATGCCACCCACAAATTCAAAGTCATTCTAGTGATGGGACTGATCCTAAAATTGAAGATCTTAGTACTCTTCCTCTAATTGAACAAGATGATTCTAATACAATATCTCTTGCAACTGATGATGATTTTGTTGAAGAAACCATATTGTGCAGGCTTCAGGATGTTATATCAAAGTTAGATGTCACAACAAGACTCTGCATCAGAGATAGCTTGTTCCGGCTGGCACAAAGTGCAACGCAACGGCATTATGCTAGTGACACAAGCAGTACAAACAAAAATAACAAAGAAGAATATGCCGTTTTTGCAAGAGAAGAAAGCAGTAGCCAAAACAGGATGCCTGATGTTGAAACAGAGACGAATTCCATTGATCGAACTGTCGCCCGTTTACTCTTTCATAGACCTGTGGAGTTAACAGGAAATTATTCTGACAAACTGGAGTCGCACATTTCAACTAAGGTGCAATGTGAAAGCAAAGCTGCTAACCAAGTGAGCTTTCCCGTGAGGTGCTTACAAGAGGAGAACTTGAGAAGTAATCAACAACTTTCTCACATTGGGTTAGAGAATCCTTGTCCATCTTTTGAGGTCCAACCTATGGATCAGACTAAGAACAGTCTCAGCATAGGTACTTCAGAAAATGCATCTAACCCACCGGAGCTTGAAGCCTCTCAATGA
Protein sequence

>MsG0180002232.01.T01

MENFQLANIIWDEGGEGDDHIVPFPEASEDLKNKKEVNQEPAVCKLNKRKQPETKTDFDGKLGSSSNLDNNGGQLASGYVANSCSDLSLSSAAKIDQDSLSTELSKYRGELSKLEETTENGRDAEFYQNADEGKEQGDFADYDWANIGSFDDLDRIFSNDDPIFGHASLDNSDDLWSAKDVSSNQASVPLNTPSPTDALRNRSGPLEIKEEHVHCSDQSFSLNYEKISGPACQSIENSHTTADNVECAGDRSKPIGHEQQSFSQKYQLKTRKKSKIKQEGKDLQDFYGNWSSSATSARQFESQLTPSVLQSSPSSILGQPNQLLGPETYQNIINPYVAPSFYGNLPAMPMLTQFQSGNLRHQHVLSGYETSAGPLSPLKSYAGSAVPQTMTPQEKIEKLRRRQQMQAMLAIQKQQQVLGHQVPCTSKPVAQICHPQIQSHSSDGTDPKIEDLSTLPLIEQDDSNTISLATDDDFVEETILCRLQDVISKLDVTTRLCIRDSLFRLAQSATQRHYASDTSSTNKNNKEEYAVFAREESSSQNRMPDVETETNSIDRTVARLLFHRPVELTGNYSDKLESHISTKVQCESKAANQVSFPVRCLQEENLRSNQQLSHIGLENPCPSFEVQPMDQTKNSLSIGTSENASNPPELEASQ*