AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002449.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002449.01.T01 MTR_1g050545 95.238 126 6 0 1 126 371 496 1.74e-83 256
MsG0180002449.01.T01 MTR_1g094155 83.471 121 20 0 2 122 378 498 2.96e-68 217
MsG0180002449.01.T01 MTR_4g057595 72.807 114 31 0 2 115 385 498 7.43e-55 182
MsG0180002449.01.T01 MTR_2g095750 71.186 118 34 0 2 119 389 506 7.64e-55 182
MsG0180002449.01.T01 MTR_4g057585 73.874 111 29 0 2 112 384 494 4.09e-54 180
MsG0180002449.01.T01 MTR_2g095710 70.270 111 33 0 2 112 372 482 1.60e-51 172
MsG0180002449.01.T01 MTR_2g095730 72.072 111 31 0 2 112 386 496 2.07e-51 173
MsG0180002449.01.T01 MTR_4g057600 69.369 111 34 0 2 112 383 493 3.19e-51 172
MsG0180002449.01.T01 MTR_4g057570 59.649 114 43 1 2 112 378 491 2.13e-41 146
MsG0180002449.01.T01 MTR_4g056520 38.235 102 61 1 5 104 348 449 4.75e-15 73.2
MsG0180002449.01.T01 MTR_2g084530 38.384 99 57 2 18 113 359 456 5.47e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002449.01.T01 AT3G45010 75.000 112 28 0 2 113 390 501 6.78e-58 190
MsG0180002449.01.T01 AT3G10410 76.106 113 27 0 2 114 386 498 3.39e-57 188
MsG0180002449.01.T01 AT5G22980 68.468 111 35 0 2 112 385 495 3.29e-51 172
MsG0180002449.01.T01 AT2G27920 36.364 110 68 1 2 109 276 385 1.37e-15 74.7
MsG0180002449.01.T01 AT2G27920 36.364 110 68 1 2 109 281 390 1.45e-15 74.3
MsG0180002449.01.T01 AT2G27920 36.364 110 68 1 2 109 348 457 2.87e-15 73.9

Find 160 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATTCATGAAAACTTTA+TGG 0.121476 1:-38537230 MsG0180002449.01.T01:CDS
AAATGGCCCTTTCAAAATTA+AGG 0.201818 1:-38541990 MsG0180002449.01.T01:five_prime_UTR
AAAAGTCATTCTTTGCATAT+TGG 0.214374 1:+38540224 None:intergenic
ATTCCAAACCACAACCAAAA+TGG 0.223365 1:-38542542 MsG0180002449.01.T01:five_prime_UTR
GATGTTCCCTTTGTTGTTAA+TGG 0.227469 1:-38538317 MsG0180002449.01.T01:CDS
CATCATCATCATCGGAAATT+AGG 0.227674 1:+38542312 None:intergenic
GAACAAGATTGACCCCATTT+TGG 0.231873 1:+38542528 None:intergenic
AAAGTCATTCTTTGCATATT+GGG 0.239208 1:+38540225 None:intergenic
TTGGCTTTGTTCTACGAAAA+TGG 0.248188 1:-38542007 MsG0180002449.01.T01:five_prime_UTR
GATCAGAATCTAAATGATTT+TGG 0.252807 1:-38537165 MsG0180002449.01.T01:CDS
TTGTAGCACTGAAGTTTATA+TGG 0.278236 1:-38538632 MsG0180002449.01.T01:exon
GGACACTATATTCCTGCTTT+AGG 0.312182 1:-38540178 MsG0180002449.01.T01:five_prime_UTR
ACCTGTTGTCATTTGGTTGC+TGG 0.324701 1:-38542052 MsG0180002449.01.T01:five_prime_UTR
ATGTTCCCTTTGTTGTTAAT+GGG 0.326475 1:-38538316 MsG0180002449.01.T01:CDS
GTGAATCCCGAACCGATTCT+TGG 0.328298 1:+38538682 None:intergenic
ACAATTCATGAAAACTTTAT+GGG 0.329581 1:-38537229 MsG0180002449.01.T01:CDS
CAGCATATCTAATGCAGCTT+TGG 0.330927 1:+38537741 None:intergenic
AAGGTTACACATGCGCTTCT+TGG 0.341605 1:-38539933 MsG0180002449.01.T01:five_prime_UTR
TGTCATTGAAATGAGATTAC+AGG 0.342894 1:+38539371 None:intergenic
CATTTGGTTGCTGGAGGACC+TGG 0.343119 1:-38542043 MsG0180002449.01.T01:five_prime_UTR
CACTCAGTTTGTGAATTTGA+TGG 0.345096 1:-38537453 MsG0180002449.01.T01:intron
ACACTCCTTATGTCTCTAAA+AGG 0.353880 1:-38537125 MsG0180002449.01.T01:CDS
TGATGTTTCCGTTGATGATT+TGG 0.354704 1:-38542286 MsG0180002449.01.T01:five_prime_UTR
TGACGTCCGGGAACAAATTA+AGG 0.355162 1:+38542413 None:intergenic
AGCATATCTAATGCAGCTTT+GGG 0.361552 1:+38537742 None:intergenic
TAGGCTTTATACTGAATTGC+AGG 0.370273 1:+38539990 None:intergenic
TCTGCCACCAGCGTTGATCT+TGG 0.376245 1:-38542469 MsG0180002449.01.T01:five_prime_UTR
ATCGATTTACTCATTTATGC+TGG 0.380104 1:-38538547 MsG0180002449.01.T01:CDS
TTCCAAACCACAACCAAAAT+GGG 0.386500 1:-38542541 MsG0180002449.01.T01:five_prime_UTR
CCCATCTCAAGAGCATAATC+TGG 0.392919 1:+38539966 None:intergenic
TTTCTGACCGGACCATTTCA+TGG 0.393553 1:+38538358 None:intergenic
TTCTGAACCAAGAATCGGTT+CGG 0.397853 1:-38538689 MsG0180002449.01.T01:five_prime_UTR
TTGTATGTTGATCAACCAAC+TGG 0.406197 1:-38541397 MsG0180002449.01.T01:five_prime_UTR
GAAGACGACCTGTTGTCATT+TGG 0.406575 1:-38542059 MsG0180002449.01.T01:five_prime_UTR
GAGAGACCTTAATTTGTTCC+CGG 0.417071 1:-38542419 MsG0180002449.01.T01:five_prime_UTR
CAGGGATTGGCCATTGGTAA+TGG 0.418753 1:-38540022 MsG0180002449.01.T01:five_prime_UTR
TGATATTCGTCATAATGAAA+AGG 0.431549 1:-38541344 MsG0180002449.01.T01:five_prime_UTR
TATGAAATCCTTCATTAGCT+TGG 0.436483 1:+38540135 None:intergenic
TCTGAACCAAGAATCGGTTC+GGG 0.438534 1:-38538688 MsG0180002449.01.T01:five_prime_UTR
AGGATTTCATATAAATTTGA+AGG 0.442514 1:-38540123 MsG0180002449.01.T01:intron
GTTGTTAATGGGTCAGAAGC+TGG 0.442820 1:-38538305 MsG0180002449.01.T01:CDS
GCAGCTTTGGGCTGGTCCAT+TGG 0.446131 1:+38537754 None:intergenic
GTTGATCAACCAACTGGAAC+TGG 0.446905 1:-38541391 MsG0180002449.01.T01:five_prime_UTR
TCATTAGCTTGGTTCCTTGA+CGG 0.450340 1:+38540146 None:intergenic
TTAACAACAAAGGGAACATC+AGG 0.458256 1:+38538320 None:intergenic
TTGGAATCACACAAAAGAAA+AGG 0.460563 1:+38542558 None:intergenic
AATATGATCTCATATGCAAC+TGG 0.462944 1:-38538522 MsG0180002449.01.T01:CDS
ATATGGCTATGTTGGTTGAC+TGG 0.465047 1:-38538615 MsG0180002449.01.T01:CDS
TTGGTTGATCAACATACAAA+AGG 0.467873 1:+38541401 None:intergenic
AGCGATGTTGAGTTGACGTC+CGG 0.470853 1:+38542400 None:intergenic
GATGGGTTCATGCCATGAAA+TGG 0.475394 1:-38538370 MsG0180002449.01.T01:CDS
CCAGATTATGCTCTTGAGAT+GGG 0.476952 1:-38539966 MsG0180002449.01.T01:five_prime_UTR
TGCAGCATGGGAATGTTGAA+TGG 0.478923 1:+38542243 None:intergenic
TCGATTTACTCATTTATGCT+GGG 0.480146 1:-38538546 MsG0180002449.01.T01:CDS
AATGACTAGGTAATTCAAGA+TGG 0.481921 1:-38538388 MsG0180002449.01.T01:intron
TGATGATTTGGTCACTATGC+TGG 0.482421 1:-38542274 MsG0180002449.01.T01:five_prime_UTR
TGTTACTTACTTTGCAGCAT+GGG 0.483406 1:+38542231 None:intergenic
ACTCAGTTTGTGAATTTGAT+GGG 0.483545 1:-38537452 MsG0180002449.01.T01:intron
TGAAGTTTATATGGCTATGT+TGG 0.485163 1:-38538623 MsG0180002449.01.T01:exon
TTGGGGATGCTCTGCAAAGA+AGG 0.485380 1:+38540243 None:intergenic
CCCAGATTATGCTCTTGAGA+TGG 0.485893 1:-38539967 MsG0180002449.01.T01:five_prime_UTR
AATGACATCTTGTTGCATGC+TGG 0.487424 1:-38539355 MsG0180002449.01.T01:five_prime_UTR
AAAGTTTCTGAACCAAGAAT+CGG 0.491136 1:-38538694 MsG0180002449.01.T01:five_prime_UTR
ATTCCTATCCTTCTTGAGGA+TGG 0.491791 1:-38538571 MsG0180002449.01.T01:CDS
TCCAGCAACCAAATGACAAC+AGG 0.492291 1:+38542051 None:intergenic
AATTAGGTTACGAAACTTGA+GGG 0.500984 1:+38542328 None:intergenic
GTTGGTTCCAGCCTGTGAAT+TGG 0.501046 1:-38539904 MsG0180002449.01.T01:five_prime_UTR
GGCTACAAATTCTTTCTGAC+CGG 0.502694 1:+38538346 None:intergenic
GATATTCGTCATAATGAAAA+GGG 0.503932 1:-38541343 MsG0180002449.01.T01:five_prime_UTR
AGGATGACTTGTCTCTTACA+TGG 0.507608 1:-38541970 MsG0180002449.01.T01:five_prime_UTR
AATGGATTGCAGCAAAATAG+AGG 0.508628 1:-38537089 None:intergenic
TAGCTTTATTGCCAATTCAC+AGG 0.510290 1:+38539893 None:intergenic
AAGTCATTCTTTGCATATTG+GGG 0.511520 1:+38540226 None:intergenic
TGCGCTTCTTGGCAAAGTGT+TGG 0.512150 1:-38539922 MsG0180002449.01.T01:five_prime_UTR
TTTGAACAGGGATTGGCCAT+TGG 0.517096 1:-38540028 MsG0180002449.01.T01:intron
GAATCGGTTCGGGATTCACT+AGG 0.517338 1:-38538678 MsG0180002449.01.T01:five_prime_UTR
ACCCTTGCTGAATCCATAGC+TGG 0.518737 1:-38537700 MsG0180002449.01.T01:CDS
GGTTACATTGTCCAACATAG+TGG 0.519195 1:+38541945 None:intergenic
TGGTATTCCTATCCTTCTTG+AGG 0.521005 1:-38538575 MsG0180002449.01.T01:CDS
ATATGCTGAAGAAGTGGACT+CGG 0.522178 1:-38537726 MsG0180002449.01.T01:CDS
ATTACAGGCGAATCATATGC+TGG 0.522904 1:-38540199 MsG0180002449.01.T01:five_prime_UTR
TATCTAATGCAGCTTTGGGC+TGG 0.523690 1:+38537746 None:intergenic
ACCTGGCTGTAGTAGTGAGT+TGG 0.526944 1:-38542026 MsG0180002449.01.T01:five_prime_UTR
GCAGCATGGGAATGTTGAAT+GGG 0.527429 1:+38542244 None:intergenic
TCTGACCCATTAACAACAAA+GGG 0.527793 1:+38538311 None:intergenic
GAACCATGTGACCCGCATCA+TGG 0.535254 1:+38537776 None:intergenic
TCCTTATGTCTCTAAAAGGA+AGG 0.535352 1:-38537121 MsG0180002449.01.T01:CDS
TTTATTGCCAATTCACAGGC+TGG 0.539098 1:+38539897 None:intergenic
CCTTATGTCTCTAAAAGGAA+GGG 0.540219 1:-38537120 MsG0180002449.01.T01:CDS
CATCAAATCATCATCATCAT+CGG 0.549158 1:+38542304 None:intergenic
GTTCATGCCATGAAATGGTC+CGG 0.550483 1:-38538365 MsG0180002449.01.T01:CDS
CTTACATGGAACCACTATGT+TGG 0.552941 1:-38541956 MsG0180002449.01.T01:five_prime_UTR
CTCAGTTTGTGAATTTGATG+GGG 0.553997 1:-38537451 MsG0180002449.01.T01:intron
CTATGTTGGTTGACTGGATG+AGG 0.555535 1:-38538609 MsG0180002449.01.T01:CDS
GATCTCATATGCAACTGGCT+TGG 0.557985 1:-38538517 MsG0180002449.01.T01:intron
GGGACCACCTCGGTTGACTA+CGG 0.558850 1:-38537431 MsG0180002449.01.T01:intron
ATGACTAGGTAATTCAAGAT+GGG 0.559235 1:-38538387 MsG0180002449.01.T01:intron
ATTCCATCCTCAAGAAGGAT+AGG 0.559975 1:+38538568 None:intergenic
TCAAGGAACCAAGCTAATGA+AGG 0.560063 1:-38540143 MsG0180002449.01.T01:five_prime_UTR
AATCGGTTCGGGATTCACTA+GGG 0.561324 1:-38538677 MsG0180002449.01.T01:five_prime_UTR
CTTATGTCTCTAAAAGGAAG+GGG 0.563102 1:-38537119 MsG0180002449.01.T01:CDS
CGATTTACTCATTTATGCTG+GGG 0.564051 1:-38538545 MsG0180002449.01.T01:CDS
CATTAGATATGCTGAAGAAG+TGG 0.565310 1:-38537732 MsG0180002449.01.T01:CDS
TTCTGACCCATTAACAACAA+AGG 0.566210 1:+38538310 None:intergenic
AATCGATTCCATCCTCAAGA+AGG 0.566331 1:+38538563 None:intergenic
GTGTTACTTACTTTGCAGCA+TGG 0.567792 1:+38542230 None:intergenic
TTAATCCTTTCAGGAACCGA+TGG 0.568592 1:-38539423 MsG0180002449.01.T01:intron
GTTCGGGATTCACTAGGGGT+TGG 0.569789 1:-38538672 MsG0180002449.01.T01:five_prime_UTR
TGCGGGTCACATGGTTCCAA+TGG 0.570155 1:-38537770 MsG0180002449.01.T01:CDS
TTTGATGAGCATACTACGGA+GGG 0.570616 1:-38537195 MsG0180002449.01.T01:CDS
GGTCCATGATGCGGGTCACA+TGG 0.570682 1:-38537779 MsG0180002449.01.T01:CDS
CGCCAGCTATGGATTCAGCA+AGG 0.571133 1:+38537698 None:intergenic
TATGCTGAAGAAGTGGACTC+GGG 0.574701 1:-38537725 MsG0180002449.01.T01:CDS
CGGATACGAGATCCTAAAGC+AGG 0.575255 1:+38540166 None:intergenic
CCATCTCAAGAGCATAATCT+GGG 0.577749 1:+38539967 None:intergenic
TAGCTAAAGCCAGTTCCAGT+TGG 0.580990 1:+38541382 None:intergenic
TGTTGTCATTTGGTTGCTGG+AGG 0.581022 1:-38542049 MsG0180002449.01.T01:five_prime_UTR
GCCAACTCACTACTACAGCC+AGG 0.582603 1:+38542025 None:intergenic
GATATCAGAAAGAAGTGTGA+GGG 0.585311 1:-38538747 MsG0180002449.01.T01:five_prime_UTR
TGAGATGGGCTTAATTACAA+AGG 0.585364 1:-38539952 MsG0180002449.01.T01:five_prime_UTR
CAATTCATGAAAACTTTATG+GGG 0.586525 1:-38537228 MsG0180002449.01.T01:CDS
GCGATGTTGAGTTGACGTCC+GGG 0.586846 1:+38542401 None:intergenic
TACAGGCTACATTTGCACTC+AGG 0.586897 1:+38539388 None:intergenic
TGCTGAATCCATAGCTGGCG+AGG 0.588539 1:-38537695 MsG0180002449.01.T01:CDS
TGATGAGCATACTACGGAGG+GGG 0.591296 1:-38537193 MsG0180002449.01.T01:CDS
ACAACAGGTCGTCTTCCTTG+TGG 0.595613 1:+38542066 None:intergenic
AAATTAGGTTACGAAACTTG+AGG 0.598128 1:+38542327 None:intergenic
CGGTCCTCTGAGTTTCCTGA+AGG 0.598550 1:-38538267 MsG0180002449.01.T01:intron
CAAAAGAAAAGGTTGATACA+AGG 0.603813 1:+38542569 None:intergenic
GCTGGAATATTGAAGAGCTA+CGG 0.609644 1:-38538287 MsG0180002449.01.T01:CDS
TGGATGAGGAATCTTGAAGT+TGG 0.623331 1:-38538595 MsG0180002449.01.T01:CDS
GCCAGCTATGGATTCAGCAA+GGG 0.625815 1:+38537699 None:intergenic
ATCGGTTCGGGATTCACTAG+GGG 0.625822 1:-38538676 MsG0180002449.01.T01:five_prime_UTR
TTAGGATCTCGTATCCGTCA+AGG 0.627475 1:-38540160 MsG0180002449.01.T01:five_prime_UTR
CTTCAGTCCAAGATCAACGC+TGG 0.630952 1:+38542462 None:intergenic
ATATCAGAAAGAAGTGTGAG+GGG 0.638294 1:-38538746 MsG0180002449.01.T01:five_prime_UTR
CAGTCCAAGATCAACGCTGG+TGG 0.639016 1:+38542465 None:intergenic
GACATCTTGTTGCATGCTGG+AGG 0.639075 1:-38539352 MsG0180002449.01.T01:five_prime_UTR
CTCAAGAGCATAATCTGGGT+AGG 0.640317 1:+38539971 None:intergenic
GATTAGTAAGCCATTACCAA+TGG 0.640535 1:+38540012 None:intergenic
CATAGTGACCAAATCATCAA+CGG 0.648011 1:+38542278 None:intergenic
TAACAACAAAGGGAACATCA+GGG 0.648660 1:+38538321 None:intergenic
ATTAGGTTACGAAACTTGAG+GGG 0.648768 1:+38542329 None:intergenic
CACTGAACTGACACAACACG+AGG 0.654493 1:-38542638 MsG0180002449.01.T01:five_prime_UTR
TGATCTTGGACTGAAGCTTG+AGG 0.655721 1:-38542455 MsG0180002449.01.T01:five_prime_UTR
TGATATCAGAAAGAAGTGTG+AGG 0.656459 1:-38538748 MsG0180002449.01.T01:five_prime_UTR
AACAACAAAGGGAACATCAG+GGG 0.657286 1:+38538322 None:intergenic
GAATTTGATGGGGACCACCT+CGG 0.657994 1:-38537441 MsG0180002449.01.T01:CDS
TGCTGCAAATCATCTTCCCG+TGG 0.665884 1:-38542366 MsG0180002449.01.T01:five_prime_UTR
TCTTTGATCACGCAACCACA+AGG 0.667881 1:-38542081 MsG0180002449.01.T01:five_prime_UTR
ATGCTGAAGAAGTGGACTCG+GGG 0.674515 1:-38537724 MsG0180002449.01.T01:CDS
AACAAAGGGAACATCAGGGG+AGG 0.678229 1:+38538325 None:intergenic
TCCAAACCACAACCAAAATG+GGG 0.687901 1:-38542540 MsG0180002449.01.T01:five_prime_UTR
ATTCATACCGTAGTCAACCG+AGG 0.718310 1:+38537424 None:intergenic
TTGATGAGCATACTACGGAG+GGG 0.721573 1:-38537194 MsG0180002449.01.T01:CDS
CAGCATGGGAATGTTGAATG+GGG 0.724539 1:+38542245 None:intergenic
GATACCTTCAGGAAACTCAG+AGG 0.734219 1:+38538263 None:intergenic
ACTGAACTGACACAACACGA+GGG 0.755184 1:-38542637 MsG0180002449.01.T01:five_prime_UTR
CATACCGTAGTCAACCGAGG+TGG 0.764757 1:+38537427 None:intergenic
GAATTGGCAATAAAGCTATG+CGG 0.772207 1:-38539888 MsG0180002449.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAGGAATTTAAATA+AGG + Chr1:38538618-38538637 None:intergenic 10.0%
!!! ATTTAAAGTAAAAAAATTAC+GGG - Chr1:38539322-38539341 MsG0180002449.01.T01:intron 10.0%
!!! TCAATTTTTTTTTTAATTTC+TGG - Chr1:38542423-38542442 MsG0180002449.01.T01:five_prime_UTR 10.0%
!! ACTAATTCAATTTCTTAATA+GGG - Chr1:38538947-38538966 MsG0180002449.01.T01:intron 15.0%
!! AGGATTAAAACAAATATTAA+AGG + Chr1:38540294-38540313 None:intergenic 15.0%
!! ATTATATTCTTTGAATAATG+AGG - Chr1:38541288-38541307 MsG0180002449.01.T01:intron 15.0%
!! TATAAAAAAAAAAAAGTCGT+TGG + Chr1:38542245-38542264 None:intergenic 15.0%
!!! AATCTGAAAATGAAATTTTT+TGG + Chr1:38538840-38538859 None:intergenic 15.0%
!!! TTAGATTTGTTTAAAAATGA+AGG + Chr1:38540119-38540138 None:intergenic 15.0%
!!! TTAGTTTTGTCTAAATATAA+AGG + Chr1:38538631-38538650 None:intergenic 15.0%
!!! TTTTTTAATTTTTTTTCCTC+AGG - Chr1:38539463-38539482 MsG0180002449.01.T01:intron 15.0%
!! AAAAGAGAAAAAGTGAAATT+AGG + Chr1:38537808-38537827 None:intergenic 20.0%
!! ACAATTCATGAAAACTTTAT+GGG - Chr1:38542500-38542519 MsG0180002449.01.T01:five_prime_UTR 20.0%
!! AGCAAAACAATAAATGATTT+GGG + Chr1:38541888-38541907 None:intergenic 20.0%
!! AGGATTTCATATAAATTTGA+AGG - Chr1:38539606-38539625 MsG0180002449.01.T01:intron 20.0%
!! ATTTACTGTGTAATAAAAAC+AGG - Chr1:38541929-38541948 MsG0180002449.01.T01:intron 20.0%
!! CACTAATTCAATTTCTTAAT+AGG - Chr1:38538946-38538965 MsG0180002449.01.T01:intron 20.0%
!! CTCTTAATTAAAAACTATTG+TGG + Chr1:38540818-38540837 None:intergenic 20.0%
!! TAAGAAATTGAATTAGTGAA+TGG + Chr1:38538944-38538963 None:intergenic 20.0%
!! TACAATTCATGAAAACTTTA+TGG - Chr1:38542499-38542518 MsG0180002449.01.T01:five_prime_UTR 20.0%
!! TCCATATTTGAAAAAGAATA+AGG - Chr1:38538976-38538995 MsG0180002449.01.T01:intron 20.0%
!!! AACACAATAGTTTTATAGTA+GGG + Chr1:38537606-38537625 None:intergenic 20.0%
!!! AAGAATGACTTTTTTATTAC+AGG - Chr1:38539515-38539534 MsG0180002449.01.T01:intron 20.0%
!!! AGAGTTCTAATAATTTTATC+AGG - Chr1:38540572-38540591 MsG0180002449.01.T01:intron 20.0%
!!! ATATTTGTTTTAATCCTTTC+AGG - Chr1:38540297-38540316 MsG0180002449.01.T01:intron 20.0%
!!! ATCATAATTTTCAATGAGTA+AGG - Chr1:38538896-38538915 MsG0180002449.01.T01:intron 20.0%
!!! ATGTTTTGATTAAAATCGAA+AGG - Chr1:38537841-38537860 MsG0180002449.01.T01:intron 20.0%
!!! CACAATAGTTTTTAATTAAG+AGG - Chr1:38540816-38540835 MsG0180002449.01.T01:intron 20.0%
!!! CTAAATACAGTGTTTTAATT+TGG - Chr1:38538647-38538666 MsG0180002449.01.T01:five_prime_UTR 20.0%
!!! CTAATAATTTTATCAGGATT+TGG - Chr1:38540578-38540597 MsG0180002449.01.T01:intron 20.0%
!!! GAAACATTCTGATTTTATAT+AGG - Chr1:38539653-38539672 MsG0180002449.01.T01:intron 20.0%
!!! GTTTTTAATTAAGAGGTTTA+TGG - Chr1:38540823-38540842 MsG0180002449.01.T01:intron 20.0%
!!! TGATGTCGTTTATTTATTAT+GGG + Chr1:38537583-38537602 None:intergenic 20.0%
!!! TGTTTTCTAACTTTTGAAAT+GGG - Chr1:38538724-38538743 MsG0180002449.01.T01:five_prime_UTR 20.0%
!!! TGTTTTGATTAAAATCGAAA+GGG - Chr1:38537842-38537861 MsG0180002449.01.T01:intron 20.0%
!!! TTATTTTAATGGTTTGAACA+GGG - Chr1:38539689-38539708 MsG0180002449.01.T01:intron 20.0%
!!! TTGTTTTCTAACTTTTGAAA+TGG - Chr1:38538723-38538742 MsG0180002449.01.T01:five_prime_UTR 20.0%
! AAAAGTCATTCTTTGCATAT+TGG + Chr1:38539508-38539527 None:intergenic 25.0%
! AAAATTATTAGAACTCTCCA+TGG + Chr1:38540569-38540588 None:intergenic 25.0%
! AAAGCCAGAATGTTAAAATT+GGG - Chr1:38541726-38541745 MsG0180002449.01.T01:intron 25.0%
! AAAGTCATTCTTTGCATATT+GGG + Chr1:38539507-38539526 None:intergenic 25.0%
! AATCTTAGTGCAATTCTAAA+AGG - Chr1:38538479-38538498 MsG0180002449.01.T01:intron 25.0%
! ACCATTAAAATAAGATACAC+TGG + Chr1:38539682-38539701 None:intergenic 25.0%
! AGATATCTCAATATGAGTAA+AGG + Chr1:38539093-38539112 None:intergenic 25.0%
! AGCAAGTTTATATTTGATCA+TGG + Chr1:38541810-38541829 None:intergenic 25.0%
! AGTTATAAGTAGAATTAGGA+AGG + Chr1:38538551-38538570 None:intergenic 25.0%
! ATTTAATCAGCACTATTGAA+TGG + Chr1:38541630-38541649 None:intergenic 25.0%
! CAATTCATGAAAACTTTATG+GGG - Chr1:38542501-38542520 MsG0180002449.01.T01:five_prime_UTR 25.0%
! CATTATGATAACAAACAATG+AGG + Chr1:38537961-38537980 None:intergenic 25.0%
! CTTCAGTTATAAGTAGAATT+AGG + Chr1:38538555-38538574 None:intergenic 25.0%
! GAGCAAAACAATAAATGATT+TGG + Chr1:38541889-38541908 None:intergenic 25.0%
! GATATTCGTCATAATGAAAA+GGG - Chr1:38538386-38538405 MsG0180002449.01.T01:intron 25.0%
! GGTCAAAAGAAAAAAAAAAC+AGG + Chr1:38540197-38540216 None:intergenic 25.0%
! TAAAAACACTCACATCTTTA+AGG + Chr1:38538184-38538203 None:intergenic 25.0%
! TAAAGCCAGAATGTTAAAAT+TGG - Chr1:38541725-38541744 MsG0180002449.01.T01:intron 25.0%
! TATTCAATAGGAATCAATCT+TGG - Chr1:38540741-38540760 MsG0180002449.01.T01:intron 25.0%
! TCACATTATATCACTTAAGA+GGG + Chr1:38542365-38542384 None:intergenic 25.0%
! TGATATTCGTCATAATGAAA+AGG - Chr1:38538385-38538404 MsG0180002449.01.T01:intron 25.0%
! TTGAATCATAAAACTACTGT+TGG - Chr1:38539982-38540001 MsG0180002449.01.T01:five_prime_UTR 25.0%
!! AAATATATGAAGTGTCTTTC+TGG + Chr1:38541864-38541883 None:intergenic 25.0%
!! AAGTCATCCTTAATTTTGAA+AGG + Chr1:38537749-38537768 None:intergenic 25.0%
!! AATGAATTTTGTTCAAAGCT+TGG + Chr1:38540088-38540107 None:intergenic 25.0%
!! ATCTTAGTGCAATTCTAAAA+GGG - Chr1:38538480-38538499 MsG0180002449.01.T01:intron 25.0%
!! GATATAATGTGACATTTTGA+TGG - Chr1:38542373-38542392 MsG0180002449.01.T01:five_prime_UTR 25.0%
!! GATCAGAATCTAAATGATTT+TGG - Chr1:38542564-38542583 MsG0180002449.01.T01:five_prime_UTR 25.0%
!! GTGATGTCGTTTATTTATTA+TGG + Chr1:38537584-38537603 None:intergenic 25.0%
!! TTTTGTCATCACTAATGATT+TGG + Chr1:38541676-38541695 None:intergenic 25.0%
!!! AAAACTATTGTGTTGTTTGT+AGG - Chr1:38537612-38537631 MsG0180002449.01.T01:intron 25.0%
!!! AAAGATGTGAGTGTTTTTAT+GGG - Chr1:38538185-38538204 MsG0180002449.01.T01:intron 25.0%
!!! AAATTTGTTGCCTATTTTGT+AGG - Chr1:38538298-38538317 MsG0180002449.01.T01:CDS 25.0%
!!! ACCAGTGTATCTTATTTTAA+TGG - Chr1:38539678-38539697 MsG0180002449.01.T01:intron 25.0%
!!! AGTCATCCTTAATTTTGAAA+GGG + Chr1:38537748-38537767 None:intergenic 25.0%
!!! CAACACAATAGTTTTATAGT+AGG + Chr1:38537607-38537626 None:intergenic 25.0%
!!! CTTATTTTAATGGTTTGAAC+AGG - Chr1:38539688-38539707 MsG0180002449.01.T01:intron 25.0%
!!! GCCTTATTCTTTTTCAAATA+TGG + Chr1:38538980-38538999 None:intergenic 25.0%
!!! GTACTCATTTATTTCTGATT+TGG - Chr1:38542138-38542157 MsG0180002449.01.T01:intron 25.0%
!!! GTTTTCTAACTTTTGAAATG+GGG - Chr1:38538725-38538744 MsG0180002449.01.T01:five_prime_UTR 25.0%
!!! GTTTTGATTAAAATCGAAAG+GGG - Chr1:38537843-38537862 MsG0180002449.01.T01:intron 25.0%
!!! TAAAGATGTGAGTGTTTTTA+TGG - Chr1:38538184-38538203 MsG0180002449.01.T01:intron 25.0%
!!! TTTTGATTAAAATCGAAAGG+GGG - Chr1:38537844-38537863 MsG0180002449.01.T01:intron 25.0%
AAACAAAAATGAAAACCAGG+AGG - Chr1:38542113-38542132 MsG0180002449.01.T01:intron 30.0%
AAAGTTTCTGAACCAAGAAT+CGG - Chr1:38541035-38541054 MsG0180002449.01.T01:intron 30.0%
AAATGGCCCTTTCAAAATTA+AGG - Chr1:38537739-38537758 MsG0180002449.01.T01:CDS 30.0%
AAATTAGGTTACGAAACTTG+AGG + Chr1:38537405-38537424 None:intergenic 30.0%
AAGTCATTCTTTGCATATTG+GGG + Chr1:38539506-38539525 None:intergenic 30.0%
AATATGATCTCATATGCAAC+TGG - Chr1:38541207-38541226 MsG0180002449.01.T01:intron 30.0%
AATGACTAGGTAATTCAAGA+TGG - Chr1:38541341-38541360 MsG0180002449.01.T01:five_prime_UTR 30.0%
AATTAGGTTACGAAACTTGA+GGG + Chr1:38537404-38537423 None:intergenic 30.0%
ACCTAAAGTTTACATGATCA+TGG + Chr1:38539909-38539928 None:intergenic 30.0%
ACTCAGTTTGTGAATTTGAT+GGG - Chr1:38542277-38542296 MsG0180002449.01.T01:five_prime_UTR 30.0%
AGGAAACAAAAATGAAAACC+AGG - Chr1:38542110-38542129 MsG0180002449.01.T01:intron 30.0%
ATAAGAATGAGTACTTAGTG+TGG + Chr1:38540627-38540646 None:intergenic 30.0%
ATGACTAGGTAATTCAAGAT+GGG - Chr1:38541342-38541361 MsG0180002449.01.T01:five_prime_UTR 30.0%
ATGAGCAAGTTTACTATTTG+TGG - Chr1:38537879-38537898 MsG0180002449.01.T01:intron 30.0%
CACATTATATCACTTAAGAG+GGG + Chr1:38542364-38542383 None:intergenic 30.0%
CATCAAATCATCATCATCAT+CGG + Chr1:38537428-38537447 None:intergenic 30.0%
GATTCTTGACAATTTACTTC+TGG + Chr1:38540170-38540189 None:intergenic 30.0%
GTCACATTATATCACTTAAG+AGG + Chr1:38542366-38542385 None:intergenic 30.0%
GTTCTTGATCTTGAAAAAAC+TGG + Chr1:38539037-38539056 None:intergenic 30.0%
TAAGAATGAGTACTTAGTGT+GGG + Chr1:38540626-38540645 None:intergenic 30.0%
TACAGTTCAAGCAATCTATT+TGG - Chr1:38540517-38540536 MsG0180002449.01.T01:intron 30.0%
TACTATCAACTTACCAATGT+TGG - Chr1:38538759-38538778 MsG0180002449.01.T01:intron 30.0%
TACTGAATGCTTATATTGTG+CGG - Chr1:38541761-38541780 MsG0180002449.01.T01:intron 30.0%
TATGAAATCCTTCATTAGCT+TGG + Chr1:38539597-38539616 None:intergenic 30.0%
TCCAAGTCCTATAAATCAAA+GGG - Chr1:38539143-38539162 MsG0180002449.01.T01:intron 30.0%
TCCATGATCATGTAAACTTT+AGG - Chr1:38539905-38539924 MsG0180002449.01.T01:five_prime_UTR 30.0%
TCCTAAAATACTGTATACCA+TGG - Chr1:38540549-38540568 MsG0180002449.01.T01:intron 30.0%
TCGATTTACTCATTTATGCT+GGG - Chr1:38541183-38541202 MsG0180002449.01.T01:intron 30.0%
TGAAGTTTATATGGCTATGT+TGG - Chr1:38541106-38541125 MsG0180002449.01.T01:intron 30.0%
TGCAATCTTGAAGCAATATA+TGG - Chr1:38540910-38540929 MsG0180002449.01.T01:intron 30.0%
TGCTTGATTAATCTAGCATA+AGG - Chr1:38542090-38542109 MsG0180002449.01.T01:five_prime_UTR 30.0%
TGTCATTGAAATGAGATTAC+AGG + Chr1:38540361-38540380 None:intergenic 30.0%
TGTTCGAATTTGCAAAAAAC+TGG - Chr1:38539244-38539263 MsG0180002449.01.T01:intron 30.0%
TTCCAAGTCCTATAAATCAA+AGG - Chr1:38539142-38539161 MsG0180002449.01.T01:intron 30.0%
TTCTACTTATAACTGAAGAG+TGG - Chr1:38538557-38538576 MsG0180002449.01.T01:CDS 30.0%
TTGGAATCACACAAAAGAAA+AGG + Chr1:38537174-38537193 None:intergenic 30.0%
TTGGATGCAATGTTGAAATT+GGG + Chr1:38541657-38541676 None:intergenic 30.0%
TTGGTTGATCAACATACAAA+AGG + Chr1:38538331-38538350 None:intergenic 30.0%
TTTGATTAAAATCGAAAGGG+GGG - Chr1:38537845-38537864 MsG0180002449.01.T01:intron 30.0%
TTTGGATGCAATGTTGAAAT+TGG + Chr1:38541658-38541677 None:intergenic 30.0%
! AAAAACTGTTTGAAACTTCC+CGG + Chr1:38542183-38542202 None:intergenic 30.0%
! ACTTACCAATGTTGGTATTT+TGG - Chr1:38538767-38538786 MsG0180002449.01.T01:intron 30.0%
! ATCGATTTACTCATTTATGC+TGG - Chr1:38541182-38541201 MsG0180002449.01.T01:intron 30.0%
! ATCTTTTGATGAGCATACTA+CGG - Chr1:38542530-38542549 MsG0180002449.01.T01:five_prime_UTR 30.0%
! ATGGGAGGAATTTTCATAAA+AGG + Chr1:38537565-38537584 None:intergenic 30.0%
! GAATACATTGTCTCTTTTTC+TGG - Chr1:38542324-38542343 MsG0180002449.01.T01:five_prime_UTR 30.0%
! GAATTGTAACACTTTTCTAC+TGG + Chr1:38542487-38542506 None:intergenic 30.0%
! GATTCAATTTTATATCCCTG+CGG + Chr1:38539969-38539988 None:intergenic 30.0%
! TCCATGGTATACAGTATTTT+AGG + Chr1:38540553-38540572 None:intergenic 30.0%
! TGTCGTTTATTTATTATGGG+AGG + Chr1:38537580-38537599 None:intergenic 30.0%
! TTGTAGCACTGAAGTTTATA+TGG - Chr1:38541097-38541116 MsG0180002449.01.T01:intron 30.0%
! TTTTAATCAGCACTTGTAAC+AGG - Chr1:38541599-38541618 MsG0180002449.01.T01:intron 30.0%
!! AAGATGTGAGTGTTTTTATG+GGG - Chr1:38538186-38538205 MsG0180002449.01.T01:intron 30.0%
!! ACAAGTGCTGATTAAAAGTT+GGG + Chr1:38541596-38541615 None:intergenic 30.0%
!! ACATTGGTAAGTTGATAGTA+TGG + Chr1:38538759-38538778 None:intergenic 30.0%
!! ATGTTCCCTTTGTTGTTAAT+GGG - Chr1:38541413-38541432 MsG0180002449.01.T01:intron 30.0%
!! CAAAAGAAAAGGTTGATACA+AGG + Chr1:38537163-38537182 None:intergenic 30.0%
!! CTGCTATGATTTTTCAAACA+TGG - Chr1:38541011-38541030 MsG0180002449.01.T01:intron 30.0%
!! TACAAGTGCTGATTAAAAGT+TGG + Chr1:38541597-38541616 None:intergenic 30.0%
!! TTTTAGAAGAGAAACAGGTT+TGG + Chr1:38540218-38540237 None:intergenic 30.0%
!!! AGTTTTTTGCAAATTCGAAC+AGG + Chr1:38539245-38539264 None:intergenic 30.0%
!!! ATTGGTTTTAGAAGAGAAAC+AGG + Chr1:38540223-38540242 None:intergenic 30.0%
!!! GTTTTAAAACCATATCTCCA+GGG + Chr1:38537920-38537939 None:intergenic 30.0%
!!! TGTTTTAAAACCATATCTCC+AGG + Chr1:38537921-38537940 None:intergenic 30.0%
AAAGAAAAGCTGATGAAGGA+AGG + Chr1:38537540-38537559 None:intergenic 35.0%
AAAGGAAGGGGAAAAAAGAA+TGG - Chr1:38542622-38542641 MsG0180002449.01.T01:five_prime_UTR 35.0%
AAATTCGAACAGGTCTCATA+TGG + Chr1:38539235-38539254 None:intergenic 35.0%
ACACTCCTTATGTCTCTAAA+AGG - Chr1:38542604-38542623 MsG0180002449.01.T01:five_prime_UTR 35.0%
ACTCAAGTTTAAATCCCACT+GGG - Chr1:38538690-38538709 MsG0180002449.01.T01:five_prime_UTR 35.0%
ACTGAATGCTTATATTGTGC+GGG - Chr1:38541762-38541781 MsG0180002449.01.T01:intron 35.0%
AGAGAAAGATAGATACCTTC+AGG + Chr1:38541480-38541499 None:intergenic 35.0%
AGCATATCTAATGCAGCTTT+GGG + Chr1:38541990-38542009 None:intergenic 35.0%
AGGAGAAGATTCTTAACAAG+CGG + Chr1:38540250-38540269 None:intergenic 35.0%
AGGTTTGACACCTACAAAAT+AGG + Chr1:38538311-38538330 None:intergenic 35.0%
AGTTAGAAAACAATCCCTCT+AGG + Chr1:38538716-38538735 None:intergenic 35.0%
ATAAAAACAGGTCCATGATG+CGG - Chr1:38541941-38541960 MsG0180002449.01.T01:intron 35.0%
ATGAAAGCTCATTGAGAATG+AGG - Chr1:38540480-38540499 MsG0180002449.01.T01:intron 35.0%
ATGGTATGGTTTCAATGACT+AGG - Chr1:38541328-38541347 MsG0180002449.01.T01:five_prime_UTR 35.0%
ATTAGGAAGGAAGAAAAGAG+TGG + Chr1:38538538-38538557 None:intergenic 35.0%
ATTAGGTTACGAAACTTGAG+GGG + Chr1:38537403-38537422 None:intergenic 35.0%
ATTCCAAACCACAACCAAAA+TGG - Chr1:38537187-38537206 MsG0180002449.01.T01:CDS 35.0%
CACTCAGTTTGTGAATTTGA+TGG - Chr1:38542276-38542295 MsG0180002449.01.T01:five_prime_UTR 35.0%
CATAGTGACCAAATCATCAA+CGG + Chr1:38537454-38537473 None:intergenic 35.0%
CATCAAATTCACAAACTGAG+TGG + Chr1:38542278-38542297 None:intergenic 35.0%
CATCATCATCATCGGAAATT+AGG + Chr1:38537420-38537439 None:intergenic 35.0%
CATTAGATATGCTGAAGAAG+TGG - Chr1:38541997-38542016 MsG0180002449.01.T01:five_prime_UTR 35.0%
CCAGAATGTTAAAATTGGGA+GGG - Chr1:38541730-38541749 MsG0180002449.01.T01:intron 35.0%
CGATTTACTCATTTATGCTG+GGG - Chr1:38541184-38541203 MsG0180002449.01.T01:intron 35.0%
CTCAGTTTGTGAATTTGATG+GGG - Chr1:38542278-38542297 MsG0180002449.01.T01:five_prime_UTR 35.0%
CTCTATACACATACACATCT+AGG - Chr1:38541500-38541519 MsG0180002449.01.T01:intron 35.0%
GAATTGGCAATAAAGCTATG+CGG - Chr1:38539841-38539860 MsG0180002449.01.T01:intron 35.0%
GACTACCAAAATACCAACAT+TGG + Chr1:38538775-38538794 None:intergenic 35.0%
GATCTATGTGAAAGAGACTA+TGG + Chr1:38539172-38539191 None:intergenic 35.0%
GATTAGTAAGCCATTACCAA+TGG + Chr1:38539720-38539739 None:intergenic 35.0%
GGATAAAGAAAAGCTGATGA+AGG + Chr1:38537544-38537563 None:intergenic 35.0%
GGTCTGAAGAAACACATTTA+TGG - Chr1:38540884-38540903 MsG0180002449.01.T01:intron 35.0%
GTGTGTACAAAACAGACTTT+GGG + Chr1:38540667-38540686 None:intergenic 35.0%
TAACAACAAAGGGAACATCA+GGG + Chr1:38541411-38541430 None:intergenic 35.0%
TACTCAAGTTTAAATCCCAC+TGG - Chr1:38538689-38538708 MsG0180002449.01.T01:five_prime_UTR 35.0%
TAGTGATGACAAAAGCAGAA+AGG - Chr1:38541682-38541701 MsG0180002449.01.T01:intron 35.0%
TATACATGTCTGACGACTTT+AGG + Chr1:38542213-38542232 None:intergenic 35.0%
TCTCAATGAGCTTTCATGTA+AGG + Chr1:38540477-38540496 None:intergenic 35.0%
TCTGACCCATTAACAACAAA+GGG + Chr1:38541421-38541440 None:intergenic 35.0%
TGGATGCAATGTTGAAATTG+GGG + Chr1:38541656-38541675 None:intergenic 35.0%
TGGTAGTCAAGCTATTCATA+GGG - Chr1:38538787-38538806 MsG0180002449.01.T01:intron 35.0%
TTAACAACAAAGGGAACATC+AGG + Chr1:38541412-38541431 None:intergenic 35.0%
TTAATGGTTTGAACAGGGAT+TGG - Chr1:38539694-38539713 MsG0180002449.01.T01:intron 35.0%
TTAGGAAGGAAGAAAAGAGT+GGG + Chr1:38538537-38538556 None:intergenic 35.0%
TTCCAAACCACAACCAAAAT+GGG - Chr1:38537188-38537207 MsG0180002449.01.T01:CDS 35.0%
TTCTGACCCATTAACAACAA+AGG + Chr1:38541422-38541441 None:intergenic 35.0%
TTCTTTGAATAATGAGGCGA+TGG - Chr1:38541294-38541313 MsG0180002449.01.T01:intron 35.0%
TTGTATGTTGATCAACCAAC+TGG - Chr1:38538332-38538351 MsG0180002449.01.T01:CDS 35.0%
TTTATCTCAGTAGAGTCGAA+CGG - Chr1:38539378-38539397 MsG0180002449.01.T01:five_prime_UTR 35.0%
! AAAACTGTTTGAAACTTCCC+GGG + Chr1:38542182-38542201 None:intergenic 35.0%
! ACATCTTTAAGGAAGATGTG+AGG + Chr1:38538173-38538192 None:intergenic 35.0%
! ATATCAGAAAGAAGTGTGAG+GGG - Chr1:38540983-38541002 MsG0180002449.01.T01:intron 35.0%
! ATGGATGCCCTTTGATTTAT+AGG + Chr1:38539153-38539172 None:intergenic 35.0%
! CCTTATGTCTCTAAAAGGAA+GGG - Chr1:38542609-38542628 MsG0180002449.01.T01:five_prime_UTR 35.0%
! CTTATGTCTCTAAAAGGAAG+GGG - Chr1:38542610-38542629 MsG0180002449.01.T01:five_prime_UTR 35.0%
! GATATCAGAAAGAAGTGTGA+GGG - Chr1:38540982-38541001 MsG0180002449.01.T01:intron 35.0%
! TACAAAACAGACTTTGGGTT+TGG + Chr1:38540662-38540681 None:intergenic 35.0%
! TAGGCTTTATACTGAATTGC+AGG + Chr1:38539742-38539761 None:intergenic 35.0%
! TCCTTATGTCTCTAAAAGGA+AGG - Chr1:38542608-38542627 MsG0180002449.01.T01:five_prime_UTR 35.0%
! TGAGATGGGCTTAATTACAA+AGG - Chr1:38539777-38539796 MsG0180002449.01.T01:intron 35.0%
! TGATATCAGAAAGAAGTGTG+AGG - Chr1:38540981-38541000 MsG0180002449.01.T01:intron 35.0%
! TGTGAGCATTGTAAATTGCA+GGG + Chr1:38540769-38540788 None:intergenic 35.0%
! TGTTACTTACTTTGCAGCAT+GGG + Chr1:38537501-38537520 None:intergenic 35.0%
! TTGGTAGTCAAGCTATTCAT+AGG - Chr1:38538786-38538805 MsG0180002449.01.T01:intron 35.0%
! TTTTCTTCTTGTTCTGCATG+TGG - Chr1:38537225-38537244 MsG0180002449.01.T01:CDS 35.0%
!! AAGTGCTGATTAAAAGTTGG+GGG + Chr1:38541594-38541613 None:intergenic 35.0%
!! AGAATGGATTGCAGCAAAAT+AGG - Chr1:38542638-38542657 MsG0180002449.01.T01:five_prime_UTR 35.0%
!! CAAGTGCTGATTAAAAGTTG+GGG + Chr1:38541595-38541614 None:intergenic 35.0%
!! CACCAACTGAGATTTTAAAG+TGG - Chr1:38539057-38539076 MsG0180002449.01.T01:intron 35.0%
!! CACTTTAAAATCTCAGTTGG+TGG + Chr1:38539059-38539078 None:intergenic 35.0%
!! CACTTTTCTACTGGTTAAAC+TGG + Chr1:38542478-38542497 None:intergenic 35.0%
!! GATGTTCCCTTTGTTGTTAA+TGG - Chr1:38541412-38541431 MsG0180002449.01.T01:five_prime_UTR 35.0%
!! GCAAGTATTGTTTCTGAACT+CGG + Chr1:38539004-38539023 None:intergenic 35.0%
!! GTCCACTTTAAAATCTCAGT+TGG + Chr1:38539062-38539081 None:intergenic 35.0%
!! TAGCTTTATTGCCAATTCAC+AGG + Chr1:38539839-38539858 None:intergenic 35.0%
!! TGATGTTTCCGTTGATGATT+TGG - Chr1:38537443-38537462 MsG0180002449.01.T01:CDS 35.0%
!! TTGGCTTTGTTCTACGAAAA+TGG - Chr1:38537722-38537741 MsG0180002449.01.T01:CDS 35.0%
!! TTGGTAAGTTGATAGTATGG+AGG + Chr1:38538756-38538775 None:intergenic 35.0%
!!! TAGTACCTTTTTTGTGACAG+AGG - Chr1:38540451-38540470 MsG0180002449.01.T01:intron 35.0%
!!! TTTTTAGCGACTAGCTCTAA+GGG - Chr1:38538089-38538108 MsG0180002449.01.T01:intron 35.0%
AAACACCTGAACCCACATTT+GGG + Chr1:38539355-38539374 None:intergenic 40.0%
AACAACAAAGGGAACATCAG+GGG + Chr1:38541410-38541429 None:intergenic 40.0%
AATAAATGAGTACAGCCTCC+TGG + Chr1:38542131-38542150 None:intergenic 40.0%
AATGACATCTTGTTGCATGC+TGG - Chr1:38540374-38540393 MsG0180002449.01.T01:intron 40.0%
ACTTTACAAACAGAACCGCA+GGG - Chr1:38539951-38539970 MsG0180002449.01.T01:five_prime_UTR 40.0%
AGATGTCAACTACACAGAAG+AGG + Chr1:38540428-38540447 None:intergenic 40.0%
AGCTGAGAAAGAGTTAAAGG+AGG + Chr1:38540689-38540708 None:intergenic 40.0%
ATTACAGGCGAATCATATGC+TGG - Chr1:38539530-38539549 MsG0180002449.01.T01:intron 40.0%
ATTCCATCCTCAAGAAGGAT+AGG + Chr1:38541164-38541183 None:intergenic 40.0%
ATTCCTATCCTTCTTGAGGA+TGG - Chr1:38541158-38541177 MsG0180002449.01.T01:intron 40.0%
CAGCATATCTAATGCAGCTT+TGG + Chr1:38541991-38542010 None:intergenic 40.0%
CCAGATTATGCTCTTGAGAT+GGG - Chr1:38539763-38539782 MsG0180002449.01.T01:intron 40.0%
CTCAGCTGAGAAAGAGTTAA+AGG + Chr1:38540692-38540711 None:intergenic 40.0%
CTTACATGGAACCACTATGT+TGG - Chr1:38537773-38537792 MsG0180002449.01.T01:CDS 40.0%
CTTTAACTCTTTCTCAGCTG+AGG - Chr1:38540690-38540709 MsG0180002449.01.T01:intron 40.0%
GAAACCATACCATGAGGAAA+AGG + Chr1:38541321-38541340 None:intergenic 40.0%
GCCAGAATGTTAAAATTGGG+AGG - Chr1:38541729-38541748 MsG0180002449.01.T01:intron 40.0%
GCTGGAATATTGAAGAGCTA+CGG - Chr1:38541442-38541461 MsG0180002449.01.T01:intron 40.0%
GGACACTATATTCCTGCTTT+AGG - Chr1:38539551-38539570 MsG0180002449.01.T01:intron 40.0%
GGAGAAGATTCTTAACAAGC+GGG + Chr1:38540249-38540268 None:intergenic 40.0%
GGCTACAAATTCTTTCTGAC+CGG + Chr1:38541386-38541405 None:intergenic 40.0%
GGTACTGCAAAAAGTCATAC+AGG + Chr1:38538424-38538443 None:intergenic 40.0%
GGTAGCTAAAATTAGATGCC+AGG + Chr1:38538132-38538151 None:intergenic 40.0%
GGTAGTCAAGCTATTCATAG+GGG - Chr1:38538788-38538807 MsG0180002449.01.T01:intron 40.0%
GGTGTGTACAAAACAGACTT+TGG + Chr1:38540668-38540687 None:intergenic 40.0%
GGTTACATTGTCCAACATAG+TGG + Chr1:38537787-38537806 None:intergenic 40.0%
GTAGTCAAGCTATTCATAGG+GGG - Chr1:38538789-38538808 MsG0180002449.01.T01:intron 40.0%
GTCATTGAAACCATACCATG+AGG + Chr1:38541327-38541346 None:intergenic 40.0%
GTTAAGAATCTTCTCCTGGT+TGG - Chr1:38540253-38540272 MsG0180002449.01.T01:intron 40.0%
TAAAAACAGGTCCATGATGC+GGG - Chr1:38541942-38541961 MsG0180002449.01.T01:intron 40.0%
TAAAACCATATCTCCAGGGA+GGG + Chr1:38537916-38537935 None:intergenic 40.0%
TAAGGCCTCTGTCACAAAAA+AGG + Chr1:38540459-38540478 None:intergenic 40.0%
TCAAGGAACCAAGCTAATGA+AGG - Chr1:38539586-38539605 MsG0180002449.01.T01:intron 40.0%
TCACATAGATCTACGATCTC+TGG - Chr1:38539181-38539200 MsG0180002449.01.T01:intron 40.0%
TCCAAACCACAACCAAAATG+GGG - Chr1:38537189-38537208 MsG0180002449.01.T01:CDS 40.0%
TGGATGAGGAATCTTGAAGT+TGG - Chr1:38541134-38541153 MsG0180002449.01.T01:intron 40.0%
TGGTATTCCTATCCTTCTTG+AGG - Chr1:38541154-38541173 MsG0180002449.01.T01:intron 40.0%
TGTTGAACTCATTACTGCTG+TGG - Chr1:38538046-38538065 MsG0180002449.01.T01:intron 40.0%
TTAAAACCATATCTCCAGGG+AGG + Chr1:38537917-38537936 None:intergenic 40.0%
TTAATCCTTTCAGGAACCGA+TGG - Chr1:38540306-38540325 MsG0180002449.01.T01:intron 40.0%
TTATCTCAGTAGAGTCGAAC+GGG - Chr1:38539379-38539398 MsG0180002449.01.T01:five_prime_UTR 40.0%
TTCTGAACCAAGAATCGGTT+CGG - Chr1:38541040-38541059 MsG0180002449.01.T01:intron 40.0%
TTCTTAACAAGCGGGTACAT+TGG + Chr1:38540241-38540260 None:intergenic 40.0%
TTTATTGCCAATTCACAGGC+TGG + Chr1:38539835-38539854 None:intergenic 40.0%
TTTGATGAGCATACTACGGA+GGG - Chr1:38542534-38542553 MsG0180002449.01.T01:five_prime_UTR 40.0%
! AAACTGTTTGAAACTTCCCG+GGG + Chr1:38542181-38542200 None:intergenic 40.0%
! AATCGATTCCATCCTCAAGA+AGG + Chr1:38541169-38541188 None:intergenic 40.0%
! AGGATGACTTGTCTCTTACA+TGG - Chr1:38537759-38537778 MsG0180002449.01.T01:CDS 40.0%
! ATATGCTGAAGAAGTGGACT+CGG - Chr1:38542003-38542022 MsG0180002449.01.T01:five_prime_UTR 40.0%
! ATATGGCTATGTTGGTTGAC+TGG - Chr1:38541114-38541133 MsG0180002449.01.T01:intron 40.0%
! CAGGCAAGCAATTTTTCCAT+CGG + Chr1:38540325-38540344 None:intergenic 40.0%
! CCATCTCAAGAGCATAATCT+GGG + Chr1:38539765-38539784 None:intergenic 40.0%
! GAACAAGATTGACCCCATTT+TGG + Chr1:38537204-38537223 None:intergenic 40.0%
! GCCCTTTGATTTATAGGACT+TGG + Chr1:38539147-38539166 None:intergenic 40.0%
! GCTTGTTAAGAATCTTCTCC+TGG - Chr1:38540249-38540268 MsG0180002449.01.T01:intron 40.0%
! GTGTGAGCATTGTAAATTGC+AGG + Chr1:38540770-38540789 None:intergenic 40.0%
! GTTTTCTTTCTGTGTAGTCC+TGG - Chr1:38538111-38538130 MsG0180002449.01.T01:intron 40.0%
! TCATTAGCTTGGTTCCTTGA+CGG + Chr1:38539586-38539605 None:intergenic 40.0%
! TTCAATGCTGCTTCGATGAT+AGG - Chr1:38540863-38540882 MsG0180002449.01.T01:intron 40.0%
! TTTTGATGAGCATACTACGG+AGG - Chr1:38542533-38542552 MsG0180002449.01.T01:five_prime_UTR 40.0%
!! AAGGATCAATTTGCTACTCG+AGG + Chr1:38538599-38538618 None:intergenic 40.0%
!! CCCTCCCAATTTTAACATTC+TGG + Chr1:38541733-38541752 None:intergenic 40.0%
!! CCCTTCCTTTTAGAGACATA+AGG + Chr1:38542612-38542631 None:intergenic 40.0%
!! GAGAGACCTTAATTTGTTCC+CGG - Chr1:38537310-38537329 MsG0180002449.01.T01:intron 40.0%
!! GTGTTACTTACTTTGCAGCA+TGG + Chr1:38537502-38537521 None:intergenic 40.0%
!! TGATGATTTGGTCACTATGC+TGG - Chr1:38537455-38537474 MsG0180002449.01.T01:intron 40.0%
!!! AAAAGTTGGGGGTATTTTGC+AGG + Chr1:38541583-38541602 None:intergenic 40.0%
!!! GTTTTTAGCGACTAGCTCTA+AGG - Chr1:38538088-38538107 MsG0180002449.01.T01:intron 40.0%
!!! TTTTTCCATCGGTTCCTGAA+AGG + Chr1:38540314-38540333 None:intergenic 40.0%
AAAACCATATCTCCAGGGAG+GGG + Chr1:38537915-38537934 None:intergenic 45.0%
AAATGTACCAGAAGCCAACC+AGG + Chr1:38540270-38540289 None:intergenic 45.0%
AAGGTTACACATGCGCTTCT+TGG - Chr1:38539796-38539815 MsG0180002449.01.T01:intron 45.0%
ACGGGTTTCATACCCAAATG+TGG - Chr1:38539340-38539359 MsG0180002449.01.T01:intron 45.0%
ACTGAACTGACACAACACGA+GGG - Chr1:38537092-38537111 MsG0180002449.01.T01:CDS 45.0%
AGGTGTGACAAAAGAGCTAG+TGG + Chr1:38538153-38538172 None:intergenic 45.0%
ATTCATACCGTAGTCAACCG+AGG + Chr1:38542308-38542327 None:intergenic 45.0%
CAGCATGGGAATGTTGAATG+GGG + Chr1:38537487-38537506 None:intergenic 45.0%
CATAGCTGGCGAGGAAAAAT+TGG - Chr1:38542043-38542062 MsG0180002449.01.T01:five_prime_UTR 45.0%
CCAGATTCAAGAGCAAACAC+AGG + Chr1:38538445-38538464 None:intergenic 45.0%
CCCAGATTATGCTCTTGAGA+TGG - Chr1:38539762-38539781 MsG0180002449.01.T01:intron 45.0%
CCTGTGTTTGCTCTTGAATC+TGG - Chr1:38538442-38538461 MsG0180002449.01.T01:intron 45.0%
CGGGTTTCATACCCAAATGT+GGG - Chr1:38539341-38539360 MsG0180002449.01.T01:intron 45.0%
GAAACACCTGAACCCACATT+TGG + Chr1:38539356-38539375 None:intergenic 45.0%
GAAGACGACCTGTTGTCATT+TGG - Chr1:38537670-38537689 MsG0180002449.01.T01:intron 45.0%
GAAGGAAGAAAAGAGTGGGT+GGG + Chr1:38538533-38538552 None:intergenic 45.0%
GACTTTACAAACAGAACCGC+AGG - Chr1:38539950-38539969 MsG0180002449.01.T01:five_prime_UTR 45.0%
GATACCTTCAGGAAACTCAG+AGG + Chr1:38541469-38541488 None:intergenic 45.0%
GATCTCATATGCAACTGGCT+TGG - Chr1:38541212-38541231 MsG0180002449.01.T01:intron 45.0%
GCAGCATGGGAATGTTGAAT+GGG + Chr1:38537488-38537507 None:intergenic 45.0%
GTTCATGCCATGAAATGGTC+CGG - Chr1:38541364-38541383 MsG0180002449.01.T01:five_prime_UTR 45.0%
GTTGATCAACCAACTGGAAC+TGG - Chr1:38538338-38538357 MsG0180002449.01.T01:CDS 45.0%
GTTGCATTTGATGCATCCTG+CGG - Chr1:38539927-38539946 MsG0180002449.01.T01:five_prime_UTR 45.0%
TACAGGCTACATTTGCACTC+AGG + Chr1:38540344-38540363 None:intergenic 45.0%
TAGCTAAAGCCAGTTCCAGT+TGG + Chr1:38538350-38538369 None:intergenic 45.0%
TCATACCCAAATGTGGGTTC+AGG - Chr1:38539347-38539366 MsG0180002449.01.T01:five_prime_UTR 45.0%
TCCAGCAACCAAATGACAAC+AGG + Chr1:38537681-38537700 None:intergenic 45.0%
TCTTTGATCACGCAACCACA+AGG - Chr1:38537648-38537667 MsG0180002449.01.T01:intron 45.0%
TGACGTCCGGGAACAAATTA+AGG + Chr1:38537319-38537338 None:intergenic 45.0%
TGATCTTGGACTGAAGCTTG+AGG - Chr1:38537274-38537293 MsG0180002449.01.T01:CDS 45.0%
TGCAGCATGGGAATGTTGAA+TGG + Chr1:38537489-38537508 None:intergenic 45.0%
TGTCAACTACACAGAAGAGG+AGG + Chr1:38540425-38540444 None:intergenic 45.0%
TTAGGATCTCGTATCCGTCA+AGG - Chr1:38539569-38539588 MsG0180002449.01.T01:intron 45.0%
TTCTGTTTGTAAAGTCCCGC+AGG + Chr1:38539946-38539965 None:intergenic 45.0%
TTGATGAGCATACTACGGAG+GGG - Chr1:38542535-38542554 MsG0180002449.01.T01:five_prime_UTR 45.0%
TTGCATTTGATGCATCCTGC+GGG - Chr1:38539928-38539947 MsG0180002449.01.T01:five_prime_UTR 45.0%
TTGTAATGTAAGTCCCACCC+CGG - Chr1:38542161-38542180 MsG0180002449.01.T01:intron 45.0%
TTTCTGACCGGACCATTTCA+TGG + Chr1:38541374-38541393 None:intergenic 45.0%
! AACTGAAGAGTGGCTTGTAG+AGG - Chr1:38538567-38538586 MsG0180002449.01.T01:CDS 45.0%
! ACCTGTTGTCATTTGGTTGC+TGG - Chr1:38537677-38537696 MsG0180002449.01.T01:intron 45.0%
! CAATTTTTCCTCGCCAGCTA+TGG + Chr1:38542045-38542064 None:intergenic 45.0%
! CCCATCTCAAGAGCATAATC+TGG + Chr1:38539766-38539785 None:intergenic 45.0%
! CTATGTTGGTTGACTGGATG+AGG - Chr1:38541120-38541139 MsG0180002449.01.T01:intron 45.0%
! CTCAAGAGCATAATCTGGGT+AGG + Chr1:38539761-38539780 None:intergenic 45.0%
! GATGGGTTCATGCCATGAAA+TGG - Chr1:38541359-38541378 MsG0180002449.01.T01:five_prime_UTR 45.0%
! GGGTTCTCAACGATTTTCCA+CGG + Chr1:38537383-38537402 None:intergenic 45.0%
! GGTTCTCAACGATTTTCCAC+GGG + Chr1:38537382-38537401 None:intergenic 45.0%
! GTTGTTAATGGGTCAGAAGC+TGG - Chr1:38541424-38541443 MsG0180002449.01.T01:intron 45.0%
! TATGCTGAAGAAGTGGACTC+GGG - Chr1:38542004-38542023 MsG0180002449.01.T01:five_prime_UTR 45.0%
! TCTGAACCAAGAATCGGTTC+GGG - Chr1:38541041-38541060 MsG0180002449.01.T01:intron 45.0%
! TGGACCTTTTCCTCATGGTA+TGG - Chr1:38541314-38541333 MsG0180002449.01.T01:five_prime_UTR 45.0%
! TGTTGTCATTTGGTTGCTGG+AGG - Chr1:38537680-38537699 MsG0180002449.01.T01:intron 45.0%
!! AATCGGTTCGGGATTCACTA+GGG - Chr1:38541052-38541071 MsG0180002449.01.T01:intron 45.0%
!! TATCTAATGCAGCTTTGGGC+TGG + Chr1:38541986-38542005 None:intergenic 45.0%
!! TTTGAACAGGGATTGGCCAT+TGG - Chr1:38539701-38539720 MsG0180002449.01.T01:intron 45.0%
!!! ACCCCATTTTGGTTGTGGTT+TGG + Chr1:38537193-38537212 None:intergenic 45.0%
!!! GATTGACCCCATTTTGGTTG+TGG + Chr1:38537198-38537217 None:intergenic 45.0%
!!! AATTTAAAGTAAAAAAATTA+CGG - Chr1:38539321-38539340 MsG0180002449.01.T01:intron 5.0%
!!! TAAATTTTCAAATAATTAAA+AGG - Chr1:38538872-38538891 MsG0180002449.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTATTCAAT+AGG - Chr1:38540729-38540748 MsG0180002449.01.T01:intron 5.0%
AACAAAGGGAACATCAGGGG+AGG + Chr1:38541407-38541426 None:intergenic 50.0%
AATCGAAAGGGGGGATGTTC+AGG - Chr1:38537854-38537873 MsG0180002449.01.T01:intron 50.0%
ACAACAGGTCGTCTTCCTTG+TGG + Chr1:38537666-38537685 None:intergenic 50.0%
ACCCTTGCTGAATCCATAGC+TGG - Chr1:38542029-38542048 MsG0180002449.01.T01:five_prime_UTR 50.0%
ACCTGGCTGTAGTAGTGAGT+TGG - Chr1:38537703-38537722 MsG0180002449.01.T01:CDS 50.0%
ATTACTGCTGTGGCTCACAG+TGG - Chr1:38538056-38538075 MsG0180002449.01.T01:intron 50.0%
CGGATACGAGATCCTAAAGC+AGG + Chr1:38539566-38539585 None:intergenic 50.0%
CTTCAGTCCAAGATCAACGC+TGG + Chr1:38537270-38537289 None:intergenic 50.0%
GAATTTGATGGGGACCACCT+CGG - Chr1:38542288-38542307 MsG0180002449.01.T01:five_prime_UTR 50.0%
GACATCTTGTTGCATGCTGG+AGG - Chr1:38540377-38540396 MsG0180002449.01.T01:intron 50.0%
GCCAGCTATGGATTCAGCAA+GGG + Chr1:38542033-38542052 None:intergenic 50.0%
GGAAGGAAGAAAAGAGTGGG+TGG + Chr1:38538534-38538553 None:intergenic 50.0%
TAAATCCCACTGGGCCTAGA+GGG - Chr1:38538699-38538718 MsG0180002449.01.T01:five_prime_UTR 50.0%
TGATGAGCATACTACGGAGG+GGG - Chr1:38542536-38542555 MsG0180002449.01.T01:five_prime_UTR 50.0%
TGCGCTTCTTGGCAAAGTGT+TGG - Chr1:38539807-38539826 MsG0180002449.01.T01:intron 50.0%
TGCTGCAAATCATCTTCCCG+TGG - Chr1:38537363-38537382 MsG0180002449.01.T01:intron 50.0%
TGTAATGTAAGTCCCACCCC+GGG - Chr1:38542162-38542181 MsG0180002449.01.T01:intron 50.0%
TTAAATCCCACTGGGCCTAG+AGG - Chr1:38538698-38538717 MsG0180002449.01.T01:five_prime_UTR 50.0%
TTGGGGATGCTCTGCAAAGA+AGG + Chr1:38539489-38539508 None:intergenic 50.0%
! ATGCTGAAGAAGTGGACTCG+GGG - Chr1:38542005-38542024 MsG0180002449.01.T01:five_prime_UTR 50.0%
! GTGAATCCCGAACCGATTCT+TGG + Chr1:38541050-38541069 None:intergenic 50.0%
! GTTGGTTCCAGCCTGTGAAT+TGG - Chr1:38539825-38539844 MsG0180002449.01.T01:intron 50.0%
! TGTTTGAAACTTCCCGGGGT+GGG + Chr1:38542177-38542196 None:intergenic 50.0%
!! AGCGATGTTGAGTTGACGTC+CGG + Chr1:38537332-38537351 None:intergenic 50.0%
!! ATCGGTTCGGGATTCACTAG+GGG - Chr1:38541053-38541072 MsG0180002449.01.T01:intron 50.0%
!! ATCTTCTCCTGGTTGGCTTC+TGG - Chr1:38540260-38540279 MsG0180002449.01.T01:intron 50.0%
!! CAGGGATTGGCCATTGGTAA+TGG - Chr1:38539707-38539726 MsG0180002449.01.T01:intron 50.0%
!! GAATCGGTTCGGGATTCACT+AGG - Chr1:38541051-38541070 MsG0180002449.01.T01:intron 50.0%
AACAATCCCTCTAGGCCCAG+TGG + Chr1:38538708-38538727 None:intergenic 55.0%
ACAATCCCTCTAGGCCCAGT+GGG + Chr1:38538707-38538726 None:intergenic 55.0%
CAGTCCAAGATCAACGCTGG+TGG + Chr1:38537267-38537286 None:intergenic 55.0%
CATACCGTAGTCAACCGAGG+TGG + Chr1:38542305-38542324 None:intergenic 55.0%
CATTTGGTTGCTGGAGGACC+TGG - Chr1:38537686-38537705 MsG0180002449.01.T01:intron 55.0%
CGCCAGCTATGGATTCAGCA+AGG + Chr1:38542034-38542053 None:intergenic 55.0%
CGGTCCTCTGAGTTTCCTGA+AGG - Chr1:38541462-38541481 MsG0180002449.01.T01:intron 55.0%
GAACCATGTGACCCGCATCA+TGG + Chr1:38541956-38541975 None:intergenic 55.0%
GCCAACTCACTACTACAGCC+AGG + Chr1:38537707-38537726 None:intergenic 55.0%
GTTCGGGATTCACTAGGGGT+TGG - Chr1:38541057-38541076 MsG0180002449.01.T01:intron 55.0%
TGCGGGTCACATGGTTCCAA+TGG - Chr1:38541959-38541978 MsG0180002449.01.T01:five_prime_UTR 55.0%
TGCTCTGCAAAGAAGGCCTG+AGG + Chr1:38539482-38539501 None:intergenic 55.0%
TGCTGAATCCATAGCTGGCG+AGG - Chr1:38542034-38542053 MsG0180002449.01.T01:five_prime_UTR 55.0%
! CTGTTTGAAACTTCCCGGGG+TGG + Chr1:38542178-38542197 None:intergenic 55.0%
! GGCGATGGACCTTTTCCTCA+TGG - Chr1:38541309-38541328 MsG0180002449.01.T01:intron 55.0%
!! GCGATGTTGAGTTGACGTCC+GGG + Chr1:38537331-38537350 None:intergenic 55.0%
!! TCTGCCACCAGCGTTGATCT+TGG - Chr1:38537260-38537279 MsG0180002449.01.T01:CDS 55.0%
CCATATCTCCAGGGAGGGGA+AGG + Chr1:38537911-38537930 None:intergenic 60.0%
CCTTCCCCTCCCTGGAGATA+TGG - Chr1:38537908-38537927 MsG0180002449.01.T01:intron 60.0%
GGGACCACCTCGGTTGACTA+CGG - Chr1:38542298-38542317 MsG0180002449.01.T01:five_prime_UTR 60.0%
GGTCCATGATGCGGGTCACA+TGG - Chr1:38541950-38541969 MsG0180002449.01.T01:intron 60.0%
!! GCAGCTTTGGGCTGGTCCAT+TGG + Chr1:38541978-38541997 None:intergenic 60.0%
GGACATGACCTTCCCCTCCC+TGG - Chr1:38537900-38537919 MsG0180002449.01.T01:intron 65.0%
! GCATACTACGGAGGGGGCGC+AGG - Chr1:38542542-38542561 MsG0180002449.01.T01:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 38537092 38542659 38537092 ID=MsG0180002449.01;Name=MsG0180002449.01
Chr1 mRNA 38537092 38542659 38537092 ID=MsG0180002449.01.T01;Parent=MsG0180002449.01;Name=MsG0180002449.01.T01;_AED=0.50;_eAED=0.50;_QI=1230|0.8|0.72|0.90|0.4|0.36|11|0|202
Chr1 exon 38542241 38542659 38542241 ID=MsG0180002449.01.T01:exon:12724;Parent=MsG0180002449.01.T01
Chr1 exon 38541951 38542117 38541951 ID=MsG0180002449.01.T01:exon:12725;Parent=MsG0180002449.01.T01
Chr1 exon 38541312 38541431 38541312 ID=MsG0180002449.01.T01:exon:12726;Parent=MsG0180002449.01.T01
Chr1 exon 38540124 38540266 38540124 ID=MsG0180002449.01.T01:exon:12727;Parent=MsG0180002449.01.T01
Chr1 exon 38539889 38540041 38539889 ID=MsG0180002449.01.T01:exon:12728;Parent=MsG0180002449.01.T01
Chr1 exon 38539345 38539432 38539345 ID=MsG0180002449.01.T01:exon:12729;Parent=MsG0180002449.01.T01
Chr1 exon 38538518 38538775 38538518 ID=MsG0180002449.01.T01:exon:12730;Parent=MsG0180002449.01.T01
Chr1 exon 38538268 38538401 38538268 ID=MsG0180002449.01.T01:exon:12731;Parent=MsG0180002449.01.T01
Chr1 exon 38537687 38537800 38537687 ID=MsG0180002449.01.T01:exon:12732;Parent=MsG0180002449.01.T01
Chr1 exon 38537432 38537468 38537432 ID=MsG0180002449.01.T01:exon:12733;Parent=MsG0180002449.01.T01
Chr1 exon 38537092 38537297 38537092 ID=MsG0180002449.01.T01:exon:12734;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38542241 38542659 38542241 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38541951 38542117 38541951 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38541312 38541431 38541312 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38540124 38540266 38540124 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38539889 38540041 38539889 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38539345 38539432 38539345 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 five_prime_UTR 38538636 38538775 38538636 ID=MsG0180002449.01.T01:five_prime_utr;Parent=MsG0180002449.01.T01
Chr1 CDS 38538518 38538635 38538518 ID=MsG0180002449.01.T01:cds;Parent=MsG0180002449.01.T01
Chr1 CDS 38538268 38538401 38538268 ID=MsG0180002449.01.T01:cds;Parent=MsG0180002449.01.T01
Chr1 CDS 38537687 38537800 38537687 ID=MsG0180002449.01.T01:cds;Parent=MsG0180002449.01.T01
Chr1 CDS 38537432 38537468 38537432 ID=MsG0180002449.01.T01:cds;Parent=MsG0180002449.01.T01
Chr1 CDS 38537092 38537297 38537092 ID=MsG0180002449.01.T01:cds;Parent=MsG0180002449.01.T01
Gene Sequence

>MsG0180002449.01.T01

ATGGCTATGTTGGTTGACTGGATGAGGAATCTTGAAGTTGGTATTCCTATCCTTCTTGAGGATGGAATCGATTTACTCATTTATGCTGGGGAATATGATCTCATATGCAACTGGCTTGGTAATTCAAGATGGGTTCATGCCATGAAATGGTCCGGTCAGAAAGAATTTGTAGCCTCCCCTGATGTTCCCTTTGTTGTTAATGGGTCAGAAGCTGGAATATTGAAGAGCTACGGTCCTCTGAGTTTCCTGAAGGTCCATGATGCGGGTCACATGGTTCCAATGGACCAGCCCAAAGCTGCATTAGATATGCTGAAGAAGTGGACTCGGGGAACCCTTGCTGAATCCATAGCTGGCGAGGAAAAATTGTTTGTGAATTTGATGGGGACCACCTCGGTTGACTACGAATCAAGTAAAAAAAGTAAATCCAGTTTAACCAGTAGAAAAGTGTTACAATTCATGAAAACTTTATGGGGTGACTTATCTTTTGATGAGCATACTACGGAGGGGGCGCAGGATCAGAATCTAAATGATTTTGGTGAAGAATGCATTTTATACACTCCTTATGTCTCTAAAAGGAAGGGGAAAAAAGAATGGATTGCAGCAAAATAG
Protein sequence

>MsG0180002449.01.T01

MAMLVDWMRNLEVGIPILLEDGIDLLIYAGEYDLICNWLGNSRWVHAMKWSGQKEFVASPDVPFVVNGSEAGILKSYGPLSFLKVHDAGHMVPMDQPKAALDMLKKWTRGTLAESIAGEEKLFVNLMGTTSVDYESSKKSKSSLTSRKVLQFMKTLWGDLSFDEHTTEGAQDQNLNDFGEECILYTPYVSKRKGKKEWIAAK*