AlfalfaGEDB | MsG0480018337.01

M. sativa cultivar ZhongmuNo.1 / MsG0480018337.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018337.01.T01	XP_003604373.1	70.37	162	39	5	17	171	121	280	1.26E-63	207

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018337.01.T01	Q9LVZ5	54.762	168	66	7	11	171	104	268	3.54E-47	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018337.01.T01	B7FK63	70.370	162	39	5	17	171	121	280	6.04e-64	207

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048506.01	MsG0480018337.01	-0.806430	8.257257e-50	4.480911e-47
MsG0080048507.01	MsG0480018337.01	-0.808435	3.100949e-50	1.773013e-47
MsG0080048748.01	MsG0480018337.01	0.802359	5.824737e-49	2.847638e-46
MsG0080048993.01	MsG0480018337.01	0.831911	1.275861e-55	1.404256e-52
MsG0080049024.01	MsG0480018337.01	0.828128	1.068136e-54	1.052160e-51
MsG0080049069.01	MsG0480018337.01	0.830491	2.850908e-55	3.008087e-52
MsG0080049070.01	MsG0480018337.01	0.917493	4.963362e-86	1.436637e-81
MsG0180000017.01	MsG0480018337.01	0.804565	2.032197e-49	1.051243e-46
MsG0180000040.01	MsG0480018337.01	0.852249	5.225803e-61	1.085370e-57
MsG0180000489.01	MsG0480018337.01	0.853516	2.269950e-61	4.917607e-58
MsG0180000490.01	MsG0480018337.01	0.807820	4.193985e-50	2.359292e-47
MsG0180000491.01	MsG0480018337.01	0.841635	4.217643e-58	6.235363e-55
MsG0180000549.01	MsG0480018337.01	0.877911	4.296282e-69	2.199163e-65
MsG0180000793.01	MsG0480018337.01	0.827160	1.823491e-54	1.746189e-51
MsG0180000833.01	MsG0480018337.01	0.829430	5.171115e-55	5.291293e-52
MsG0180000834.01	MsG0480018337.01	0.834317	3.214925e-56	3.801669e-53
MsG0180000843.01	MsG0480018337.01	0.801915	7.187272e-49	3.474082e-46
MsG0180000942.01	MsG0480018337.01	0.867894	9.770628e-66	3.466649e-62
MsG0180000976.01	MsG0480018337.01	0.863063	3.251254e-64	9.729211e-61
MsG0180001137.01	MsG0480018337.01	0.815400	9.427569e-52	6.492997e-49
MsG0180001175.01	MsG0480018337.01	0.805287	1.436036e-49	7.567835e-47
MsG0180001548.01	MsG0480018337.01	0.933946	8.625925e-96	6.334818e-91
MsG0180001664.01	MsG0480018337.01	0.801409	9.126569e-49	4.355301e-46
MsG0180001704.01	MsG0480018337.01	0.817631	2.982904e-52	2.183782e-49
MsG0180001864.01	MsG0480018337.01	0.820533	6.523444e-53	5.175208e-50
MsG0180002449.01	MsG0480018337.01	0.806045	9.955471e-50	5.349638e-47
MsG0180002700.01	MsG0480018337.01	0.874635	5.788968e-68	2.625084e-64
MsG0180003196.01	MsG0480018337.01	0.897246	1.693079e-76	1.895652e-72
MsG0180003320.01	MsG0480018337.01	-0.813047	3.119712e-51	2.015693e-48
MsG0180003404.01	MsG0480018337.01	-0.817438	3.296786e-52	2.400986e-49
MsG0180003405.01	MsG0480018337.01	0.824488	7.856990e-54	6.969401e-51
MsG0180003547.01	MsG0480018337.01	0.802189	6.311816e-49	3.072203e-46
MsG0180003637.01	MsG0480018337.01	-0.853028	3.132889e-61	6.675896e-58
MsG0180003748.01	MsG0480018337.01	0.814988	1.163633e-51	7.924629e-49
MsG0180004121.01	MsG0480018337.01	-0.804025	2.632737e-49	1.343168e-46
MsG0180004687.01	MsG0480018337.01	0.818009	2.450611e-52	1.812801e-49
MsG0180004714.01	MsG0480018337.01	0.844671	6.544832e-59	1.064345e-55
MsG0180004736.01	MsG0480018337.01	0.805494	1.299073e-49	6.882668e-47
MsG0180004792.01	MsG0480018337.01	0.896699	2.869909e-76	3.139905e-72
MsG0180004979.01	MsG0480018337.01	0.818133	2.297635e-52	1.705464e-49
MsG0180005184.01	MsG0480018337.01	0.811672	6.228411e-51	3.878977e-48
MsG0180005339.01	MsG0480018337.01	0.837092	6.371831e-57	8.189222e-54
MsG0180005416.01	MsG0480018337.01	0.824390	8.284022e-54	7.327131e-51
MsG0180005612.01	MsG0480018337.01	0.809353	1.973227e-50	1.155989e-47
MsG0180005636.01	MsG0480018337.01	-0.843358	1.472164e-58	2.297678e-55
MsG0180005666.01	MsG0480018337.01	0.848165	7.290348e-60	1.326022e-56
MsG0180005814.01	MsG0480018337.01	-0.801923	7.159384e-49	3.461313e-46
MsG0180005822.01	MsG0480018337.01	0.835973	1.228322e-56	1.526351e-53
MsG0180005898.01	MsG0480018337.01	0.825893	3.656914e-54	3.376850e-51
MsG0180005906.01	MsG0480018337.01	-0.819286	1.257593e-52	9.636204e-50
MsG0180005918.01	MsG0480018337.01	-0.809181	2.147742e-50	1.252424e-47
MsG0180005964.01	MsG0480018337.01	0.822619	2.150539e-53	1.809483e-50
MsG0180006028.01	MsG0480018337.01	0.865160	7.220469e-65	2.326154e-61
MsG0180006135.01	MsG0480018337.01	0.808267	3.367873e-50	1.917162e-47
MsG0180006136.01	MsG0480018337.01	0.800379	1.481763e-48	6.889369e-46
MsG0180006176.01	MsG0480018337.01	0.811182	7.957583e-51	4.892615e-48
MsG0180006195.01	MsG0480018337.01	-0.810418	1.164227e-50	7.013856e-48
MsG0180006217.01	MsG0480018337.01	0.877752	4.884527e-69	2.484892e-65
MsG0180006253.01	MsG0480018337.01	-0.809514	1.822430e-50	1.072161e-47
MsG0280006400.01	MsG0480018337.01	0.822432	2.376944e-53	1.989231e-50
MsG0280010728.01	MsG0480018337.01	0.811641	6.324852e-51	3.935881e-48
MsG0280011110.01	MsG0480018337.01	-0.854645	1.072464e-61	2.411668e-58
MsG0280011180.01	MsG0480018337.01	0.829517	4.925391e-55	5.052499e-52
MsG0280011218.01	MsG0480018337.01	0.864521	1.145599e-64	3.607203e-61
MsG0280011362.01	MsG0480018337.01	0.811513	6.743299e-51	4.182577e-48
MsG0380011632.01	MsG0480018337.01	0.814256	1.690037e-51	1.128428e-48
MsG0380011662.01	MsG0480018337.01	0.808012	3.817278e-50	2.158262e-47
MsG0380012782.01	MsG0480018337.01	0.809800	1.582131e-50	9.379035e-48
MsG0380012868.01	MsG0480018337.01	0.889570	2.151877e-73	1.745689e-69
MsG0380014909.01	MsG0480018337.01	0.811159	8.047677e-51	4.944900e-48
MsG0380015456.01	MsG0480018337.01	0.828941	6.792825e-55	6.850977e-52
MsG0380015744.01	MsG0480018337.01	0.804822	1.796455e-49	9.355366e-47
MsG0380016057.01	MsG0480018337.01	0.851562	8.183494e-61	1.662994e-57
MsG0380016172.01	MsG0480018337.01	0.822813	1.937672e-53	1.639237e-50
MsG0380016188.01	MsG0480018337.01	-0.834241	3.357687e-56	3.961211e-53
MsG0380016490.01	MsG0480018337.01	-0.818518	1.879959e-52	1.410366e-49
MsG0380016542.01	MsG0480018337.01	0.818069	2.375309e-52	1.759960e-49
MsG0380016545.01	MsG0480018337.01	0.841807	3.797746e-58	5.644317e-55
MsG0380016568.01	MsG0480018337.01	0.819854	9.332361e-53	7.265451e-50
MsG0380016997.01	MsG0480018337.01	0.812643	3.823228e-51	2.444094e-48
MsG0380017014.01	MsG0480018337.01	-0.800629	1.317922e-48	6.166414e-46
MsG0380017143.01	MsG0480018337.01	0.812218	4.735683e-51	2.993378e-48
MsG0380017162.01	MsG0480018337.01	0.837052	6.524558e-57	8.375661e-54
MsG0380017411.01	MsG0480018337.01	-0.851920	6.480391e-61	1.331806e-57
MsG0380017427.01	MsG0480018337.01	0.917530	4.743740e-86	1.375762e-81
MsG0380017620.01	MsG0480018337.01	0.810326	1.218426e-50	7.322759e-48
MsG0380017793.01	MsG0480018337.01	0.828129	1.067388e-54	1.051456e-51
MsG0480018107.01	MsG0480018337.01	0.815094	1.102585e-51	7.530042e-49
MsG0480018337.01	MsG0480018338.01	0.932743	5.378716e-95	3.667602e-90
MsG0480018337.01	MsG0480018592.01	0.820051	8.412381e-53	6.585804e-50
MsG0480018337.01	MsG0480018644.01	0.809188	2.140406e-50	1.248394e-47
MsG0480018337.01	MsG0480018670.01	0.819284	1.259170e-52	9.647733e-50
MsG0480018337.01	MsG0480018676.01	0.866296	3.163064e-65	1.060748e-61
MsG0480018337.01	MsG0480018997.01	0.842167	3.050286e-58	4.585266e-55
MsG0480018337.01	MsG0480019225.01	0.803914	2.777240e-49	1.412895e-46
MsG0480018337.01	MsG0480019644.01	0.860074	2.662060e-63	7.187152e-60
MsG0480018337.01	MsG0480019812.01	0.910168	2.532843e-82	5.107364e-78
MsG0480018337.01	MsG0480020363.01	0.802037	6.782860e-49	3.288834e-46
MsG0480018337.01	MsG0480020473.01	0.910871	1.152656e-82	2.403777e-78
MsG0480018337.01	MsG0480020596.01	0.882841	7.425175e-71	4.594290e-67
MsG0480018337.01	MsG0480020797.01	-0.814224	1.718052e-51	1.146089e-48
MsG0480018337.01	MsG0480021038.01	0.909199	7.411202e-82	1.424749e-77
MsG0480018337.01	MsG0480021101.01	0.879354	1.334787e-69	7.213863e-66
MsG0480018337.01	MsG0480021124.01	0.850860	1.292394e-60	2.566821e-57
MsG0480018337.01	MsG0480021213.01	0.903719	2.594354e-79	3.888171e-75
MsG0480018337.01	MsG0480021230.01	-0.805601	1.233869e-49	6.555026e-47
MsG0480018337.01	MsG0480021248.01	0.826304	2.920182e-54	2.728153e-51
MsG0480018337.01	MsG0480021377.01	0.832788	7.740237e-56	8.741938e-53
MsG0480018337.01	MsG0480021406.01	0.800223	1.594334e-48	7.383157e-46
MsG0480018337.01	MsG0480021497.01	0.825569	4.365095e-54	3.993496e-51
MsG0480018337.01	MsG0480021967.01	0.886250	4.028050e-72	2.855393e-68
MsG0480018337.01	MsG0480022113.01	0.846420	2.196951e-59	3.779401e-56
MsG0480018337.01	MsG0480022154.01	0.890650	8.129774e-74	6.897605e-70
MsG0480018337.01	MsG0480022161.01	0.810864	9.325554e-51	5.685814e-48
MsG0480018337.01	MsG0480022162.01	0.905967	2.451954e-80	4.065822e-76
MsG0480018337.01	MsG0480022240.01	0.853267	2.675284e-61	5.747750e-58
MsG0480018337.01	MsG0480022622.01	0.813009	3.179846e-51	2.052498e-48
MsG0480018337.01	MsG0480022763.01	0.801129	1.041754e-48	4.936576e-46
MsG0480018337.01	MsG0480023104.01	0.821474	3.961562e-53	3.226117e-50
MsG0480018337.01	MsG0480023148.01	0.806306	8.769091e-50	4.743658e-47
MsG0480018337.01	MsG0480023169.01	0.843090	1.734630e-58	2.684022e-55
MsG0480018337.01	MsG0480023173.01	0.807005	6.244346e-50	3.439034e-47
MsG0480018337.01	MsG0480023326.01	0.827542	1.477027e-54	1.430204e-51
MsG0480018337.01	MsG0480023406.01	0.847531	1.090129e-59	1.943628e-56
MsG0480018337.01	MsG0480023454.01	-0.842124	3.132450e-58	4.702829e-55
MsG0480018337.01	MsG0480023466.01	0.889288	2.770262e-73	2.221292e-69
MsG0480018337.01	MsG0480023495.01	0.811400	7.133709e-51	4.411606e-48
MsG0480018337.01	MsG0480023531.01	0.801801	7.586888e-49	3.656614e-46
MsG0480018337.01	MsG0480023704.01	0.803496	3.390558e-49	1.706420e-46
MsG0480018337.01	MsG0480023851.01	0.806463	8.125736e-50	4.413390e-47
MsG0480018337.01	MsG0480024011.01	0.806178	9.332161e-50	5.031952e-47
MsG0480018337.01	MsG0580024087.01	-0.800954	1.131035e-48	5.336013e-46
MsG0480018337.01	MsG0580024340.01	0.822942	1.808032e-53	1.535174e-50
MsG0480018337.01	MsG0580024386.01	0.803627	3.185789e-49	1.608698e-46
MsG0480018337.01	MsG0580024598.01	0.804266	2.345972e-49	1.204227e-46
MsG0480018337.01	MsG0580024872.01	0.808396	3.162214e-50	1.806134e-47
MsG0480018337.01	MsG0580025252.01	0.852969	3.255249e-61	6.922787e-58
MsG0480018337.01	MsG0580025564.01	0.801488	8.795675e-49	4.205791e-46
MsG0480018337.01	MsG0580025565.01	0.820742	5.841213e-53	4.660851e-50
MsG0480018337.01	MsG0580025610.01	0.830260	3.246286e-55	3.402754e-52
MsG0480018337.01	MsG0580026291.01	0.809368	1.958819e-50	1.147974e-47
MsG0480018337.01	MsG0580026298.01	0.807722	4.399660e-50	2.468743e-47
MsG0480018337.01	MsG0580027183.01	0.915227	7.560031e-85	1.955751e-80
MsG0480018337.01	MsG0580027189.01	0.875101	4.015737e-68	1.852272e-64
MsG0480018337.01	MsG0580028065.01	-0.809252	2.073984e-50	1.211711e-47
MsG0480018337.01	MsG0580028118.01	-0.803740	3.018409e-49	1.528642e-46
MsG0480018337.01	MsG0580028306.01	0.802144	6.449854e-49	3.135833e-46
MsG0480018337.01	MsG0580028337.01	-0.811372	7.235894e-51	4.471219e-48
MsG0480018337.01	MsG0580028419.01	0.837061	6.490100e-57	8.333488e-54
MsG0480018337.01	MsG0580028422.01	0.844738	6.278381e-59	1.023273e-55
MsG0480018337.01	MsG0580028495.01	0.831254	1.852978e-55	1.999650e-52
MsG0480018337.01	MsG0580028547.01	0.807614	4.638321e-50	2.595187e-47
MsG0480018337.01	MsG0580029511.01	0.821540	3.825079e-53	3.120758e-50
MsG0480018337.01	MsG0580029751.01	0.816553	5.210929e-52	3.703870e-49
MsG0480018337.01	MsG0580029862.01	0.816236	6.134998e-52	4.323306e-49
MsG0480018337.01	MsG0580029937.01	-0.808859	2.517391e-50	1.455316e-47
MsG0480018337.01	MsG0580030063.01	0.800213	1.601375e-48	7.413997e-46
MsG0480018337.01	MsG0680031449.01	0.803529	3.337763e-49	1.681321e-46
MsG0480018337.01	MsG0680031713.01	0.824507	7.775416e-54	6.900789e-51
MsG0480018337.01	MsG0680031826.01	0.861355	1.087660e-63	3.069271e-60
MsG0480018337.01	MsG0680032160.01	0.801918	7.177093e-49	3.469429e-46
MsG0480018337.01	MsG0680032191.01	0.809746	1.624857e-50	9.618972e-48
MsG0480018337.01	MsG0680032245.01	0.823680	1.215482e-53	1.053890e-50
MsG0480018337.01	MsG0680032416.01	0.818152	2.275796e-52	1.690090e-49
MsG0480018337.01	MsG0680032769.01	0.807093	5.980333e-50	3.301151e-47
MsG0480018337.01	MsG0680032850.01	0.886837	2.414462e-72	1.752379e-68
MsG0480018337.01	MsG0680032932.01	-0.802825	4.669148e-49	2.310025e-46
MsG0480018337.01	MsG0680033852.01	0.805563	1.256833e-49	6.670456e-47
MsG0480018337.01	MsG0680034238.01	-0.835714	1.428713e-56	1.761688e-53
MsG0480018337.01	MsG0680034759.01	-0.834806	2.422196e-56	2.906091e-53
MsG0480018337.01	MsG0680035532.01	0.807363	5.242483e-50	2.914254e-47
MsG0480018337.01	MsG0680035664.01	0.839230	1.794214e-57	2.462025e-54
MsG0480018337.01	MsG0680035665.01	0.827334	1.656766e-54	1.594801e-51
MsG0480018337.01	MsG0780035965.01	0.862583	4.574129e-64	1.346318e-60
MsG0480018337.01	MsG0780035976.01	-0.822102	2.834483e-53	2.349725e-50
MsG0480018337.01	MsG0780036008.01	0.869174	3.773425e-66	1.402711e-62
MsG0480018337.01	MsG0780036620.01	0.852518	4.379308e-61	9.174028e-58
MsG0480018337.01	MsG0780036623.01	0.820756	5.796609e-53	4.627248e-50
MsG0480018337.01	MsG0780036792.01	0.836519	8.923934e-57	1.127281e-53
MsG0480018337.01	MsG0780037052.01	-0.829027	6.477990e-55	6.549801e-52
MsG0480018337.01	MsG0780037351.01	0.844504	7.256541e-59	1.173981e-55
MsG0480018337.01	MsG0780037363.01	0.868884	4.685183e-66	1.722699e-62
MsG0480018337.01	MsG0780037507.01	0.860533	1.933189e-63	5.301515e-60
MsG0480018337.01	MsG0780038056.01	0.821675	3.559655e-53	2.915326e-50
MsG0480018337.01	MsG0780038313.01	-0.809186	2.142810e-50	1.249733e-47
MsG0480018337.01	MsG0780038318.01	-0.800916	1.151135e-48	5.425700e-46
MsG0480018337.01	MsG0780039161.01	0.861286	1.141485e-63	3.213702e-60
MsG0480018337.01	MsG0780039805.01	0.819463	1.146028e-52	8.825613e-50
MsG0480018337.01	MsG0780039902.01	0.803884	2.816901e-49	1.431946e-46
MsG0480018337.01	MsG0780039955.01	0.826624	2.449184e-54	2.309049e-51
MsG0480018337.01	MsG0780040155.01	0.805432	1.338726e-49	7.081502e-47
MsG0480018337.01	MsG0780040214.01	0.807911	4.009964e-50	2.261064e-47
MsG0480018337.01	MsG0780040236.01	0.818483	1.914798e-52	1.435091e-49
MsG0480018337.01	MsG0780040550.01	0.829806	4.188821e-55	4.334220e-52
MsG0480018337.01	MsG0780040670.01	-0.819030	1.438196e-52	1.094383e-49
MsG0480018337.01	MsG0780040684.01	0.902921	5.908764e-79	8.555867e-75
MsG0480018337.01	MsG0780040716.01	-0.816757	4.690971e-52	3.353144e-49
MsG0480018337.01	MsG0780040965.01	0.892431	1.597097e-74	1.459676e-70
MsG0480018337.01	MsG0780041129.01	0.850838	1.310903e-60	2.601842e-57
MsG0480018337.01	MsG0780041331.01	0.921918	1.928848e-88	7.077736e-84
MsG0480018337.01	MsG0780041361.01	0.853679	2.037780e-61	4.438496e-58
MsG0480018337.01	MsG0780041385.01	0.853312	2.596869e-61	5.587206e-58
MsG0480018337.01	MsG0780041442.01	0.815894	7.316214e-52	5.107288e-49
MsG0480018337.01	MsG0780041474.01	0.801003	1.105313e-48	5.221303e-46
MsG0480018337.01	MsG0780041778.01	0.805181	1.511096e-49	7.941920e-47
MsG0480018337.01	MsG0780041828.01	0.833451	5.292699e-56	6.097789e-53
MsG0480018337.01	MsG0880041847.01	0.884279	2.195752e-71	1.440139e-67
MsG0480018337.01	MsG0880041850.01	0.802082	6.641541e-49	3.223977e-46
MsG0480018337.01	MsG0880042002.01	0.818936	1.510898e-52	1.146777e-49
MsG0480018337.01	MsG0880042044.01	0.816024	6.842584e-52	4.794124e-49
MsG0480018337.01	MsG0880042086.01	0.881427	2.421577e-70	1.418161e-66
MsG0480018337.01	MsG0880042415.01	0.929241	9.212843e-93	5.089598e-88
MsG0480018337.01	MsG0880042416.01	0.816846	4.478988e-52	3.209409e-49
MsG0480018337.01	MsG0880042512.01	0.822698	2.061092e-53	1.737984e-50
MsG0480018337.01	MsG0880043024.01	0.821213	4.549487e-53	3.678419e-50
MsG0480018337.01	MsG0880043056.01	0.836541	8.810593e-57	1.113695e-53
MsG0480018337.01	MsG0880043107.01	0.872047	4.292370e-67	1.770084e-63
MsG0480018337.01	MsG0880043463.01	-0.822494	2.299274e-53	1.927566e-50
MsG0480018337.01	MsG0880043476.01	0.843529	1.324604e-58	2.078358e-55
MsG0480018337.01	MsG0880043622.01	0.812140	4.924374e-51	3.105986e-48
MsG0480018337.01	MsG0880044620.01	0.813280	2.773055e-51	1.803112e-48
MsG0480018337.01	MsG0880044626.01	0.801574	8.445721e-49	4.047169e-46
MsG0480018337.01	MsG0880044712.01	-0.800844	1.191023e-48	5.603285e-46
MsG0480018337.01	MsG0880044834.01	0.833070	6.586379e-56	7.502558e-53
MsG0480018337.01	MsG0880044901.01	-0.827766	1.305072e-54	1.271947e-51
MsG0480018337.01	MsG0880045031.01	0.845440	4.055690e-59	6.759094e-56
MsG0480018337.01	MsG0880045312.01	0.834366	3.124623e-56	3.700189e-53
MsG0480018337.01	MsG0880045327.01	0.806606	7.579579e-50	4.131642e-47
MsG0480018337.01	MsG0880045402.01	0.825798	3.851462e-54	3.546930e-51
MsG0480018337.01	MsG0880045648.01	0.830075	3.601371e-55	3.754485e-52
MsG0480018337.01	MsG0880045724.01	-0.817827	2.695041e-52	1.983734e-49
MsG0480018337.01	MsG0880045801.01	-0.807373	5.216347e-50	2.900501e-47
MsG0480018337.01	MsG0880045927.01	0.819890	9.157401e-53	7.136515e-50
MsG0480018337.01	MsG0880046051.01	0.816370	5.726896e-52	4.050531e-49
MsG0480018337.01	MsG0880046124.01	0.870685	1.210933e-66	4.752127e-63
MsG0480018337.01	MsG0880046200.01	0.819262	1.273610e-52	9.752858e-50
MsG0480018337.01	MsG0880046324.01	0.848278	6.785550e-60	1.238869e-56
MsG0480018337.01	MsG0880046408.01	0.810512	1.111206e-50	6.711152e-48
MsG0480018337.01	MsG0880046434.01	-0.840782	7.066946e-58	1.017447e-54
MsG0480018337.01	MsG0880046759.01	0.817621	2.998872e-52	2.194865e-49
MsG0480018337.01	MsG0880046765.01	0.807111	5.928954e-50	3.274239e-47
MsG0480018337.01	MsG0880046946.01	-0.826790	2.236141e-54	2.118218e-51
MsG0480018337.01	MsG0880047312.01	-0.845937	2.974243e-59	5.037362e-56
MsG0480018337.01	MsG0880047656.01	0.809484	1.849742e-50	1.087333e-47
MsG0280006571.01	MsG0480018337.01	0.831396	1.709506e-55	1.852777e-52
MsG0280006706.01	MsG0480018337.01	0.803607	3.215720e-49	1.623038e-46
MsG0280006718.01	MsG0480018337.01	0.801714	7.902061e-49	3.800092e-46
MsG0280007406.01	MsG0480018337.01	0.891768	2.938210e-74	2.611114e-70
MsG0280007511.01	MsG0480018337.01	0.824133	9.519839e-54	8.359206e-51
MsG0280007561.01	MsG0480018337.01	0.825300	5.052537e-54	4.587353e-51
MsG0280007851.01	MsG0480018337.01	-0.800833	1.197355e-48	5.631347e-46
MsG0280007852.01	MsG0480018337.01	0.886374	3.616517e-72	2.576319e-68
MsG0280007853.01	MsG0480018337.01	0.913938	3.439554e-84	8.337684e-80
MsG0280007874.01	MsG0480018337.01	-0.807746	4.347301e-50	2.440934e-47
MsG0280008223.01	MsG0480018337.01	0.800998	1.107946e-48	5.233141e-46
MsG0280008343.01	MsG0480018337.01	0.873978	9.668124e-68	4.277987e-64
MsG0280008452.01	MsG0480018337.01	-0.836288	1.021408e-56	1.281619e-53
MsG0280009431.01	MsG0480018337.01	0.819688	1.018347e-52	7.891236e-50
MsG0280009435.01	MsG0480018337.01	0.812985	3.218540e-51	2.076093e-48
MsG0280009436.01	MsG0480018337.01	0.811539	6.656100e-51	4.131243e-48
MsG0280009445.01	MsG0480018337.01	0.832590	8.669653e-56	9.734064e-53
MsG0280009675.01	MsG0480018337.01	0.837651	4.582380e-57	5.992390e-54
MsG0280009756.01	MsG0480018337.01	0.815107	1.094999e-51	7.480964e-49
MsG0280010353.01	MsG0480018337.01	0.812931	3.306863e-51	2.129964e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018337.01.T01	MTR_4g010140	70.370	162	39	5	17	171	121	280	1.53e-67	207
MsG0480018337.01.T01	MTR_4g010140	54.762	84	34	3	17	98	121	202	3.70e-19	80.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480018337.01.T01	AT3G15840	54.762	168	66	7	11	171	101	265	3.44e-48	157
MsG0480018337.01.T01	AT3G15840	54.762	168	66	7	11	171	104	268	3.61e-48	157
MsG0480018337.01.T01	AT3G15840	54.762	168	66	7	11	171	84	248	3.75e-48	157
MsG0480018337.01.T01	AT3G15840	54.762	168	66	7	11	171	50	214	3.90e-48	155
MsG0480018337.01.T01	AT3G15840	53.571	168	68	7	11	171	104	268	1.97e-46	153

Find 44 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTCACCACCGCACATAAT+TGG	0.252908	4:+3504762	None:intergenic
GGCTTGTTCTGGTAAGGTTT+TGG	0.256890	4:+3504384	None:intergenic
TGGACTTGATTGCCAGTATA+TGG	0.267356	4:+3504404	None:intergenic
ATACTAATGGGAAGAAATTA+AGG	0.283709	4:-3503384	MsG0480018337.01.T01:three_prime_UTR
AGAATTCAATTGGCTTGTTC+TGG	0.295407	4:+3504373	None:intergenic
CTTCCCATTAGTATAGTAGA+AGG	0.305852	4:+3503393	None:intergenic
CATATTTGAATGCTGTATAT+AGG	0.316965	4:+3504700	None:intergenic
TGCGAACTGAATCTTGTTCC+AGG	0.318141	4:-3503645	MsG0480018337.01.T01:CDS
AATTTGTTAGTACGTAAATA+AGG	0.336841	4:-3503481	MsG0480018337.01.T01:three_prime_UTR
TGTCCCTTCTACTATACTAA+TGG	0.345634	4:-3503397	MsG0480018337.01.T01:three_prime_UTR
ATATTTGAATGCTGTATATA+GGG	0.361838	4:+3504701	None:intergenic
AGTAACATAGTACCATGTTT+AGG	0.374925	4:+3504673	None:intergenic
GATTGGGATGGTCCATATAC+TGG	0.402469	4:-3504416	MsG0480018337.01.T01:CDS
ACCTCGTTAAAGAATTCAAT+TGG	0.407330	4:+3504363	None:intergenic
GAATCAGAATCCACTTCAAT+TGG	0.409503	4:+3503561	None:intergenic
TCTATAACAGCAGTTGTGTC+TGG	0.416558	4:+3503907	None:intergenic
TCAATTGGCTTGTTCTGGTA+AGG	0.448143	4:+3504378	None:intergenic
TCCTTTCTGAGCATAGCTCT+TGG	0.448560	4:+3504741	None:intergenic
GTCCCTTCTACTATACTAAT+GGG	0.455766	4:-3503396	MsG0480018337.01.T01:three_prime_UTR
TGGGAAGAAATTAAGGTTCA+AGG	0.471518	4:-3503377	MsG0480018337.01.T01:three_prime_UTR
GGATCATACAAGGGCGAGCT+AGG	0.494764	4:+3503612	None:intergenic
TAGTAGTTAGCACTGAACTT+TGG	0.523402	4:-3503426	MsG0480018337.01.T01:three_prime_UTR
CTCGCCCTTGTATGATCCAA+TGG	0.534387	4:-3503607	MsG0480018337.01.T01:CDS
CCATCATCCACATTAGCCAT+TGG	0.540095	4:+3503591	None:intergenic
CCAATGGCTAATGTGGATGA+TGG	0.545754	4:-3503591	MsG0480018337.01.T01:CDS
ATTAGCCATTGGATCATACA+AGG	0.545804	4:+3503602	None:intergenic
TTTGTTGTAGGGCTTGGCAG+AGG	0.558067	4:-3503965	MsG0480018337.01.T01:intron
CAAATATGTGTTCCTAAACA+TGG	0.562988	4:-3504685	MsG0480018337.01.T01:CDS
AATTACAACAGCATGCATGC+TGG	0.565034	4:+3503500	None:intergenic
TTCCCATTAGTATAGTAGAA+GGG	0.567662	4:+3503394	None:intergenic
CTATGTTACTCAATTTCTAA+CGG	0.571229	4:-3504660	MsG0480018337.01.T01:CDS
GCTATGCTCAGAAAGGATAG+AGG	0.573110	4:-3504735	MsG0480018337.01.T01:CDS
GCGAACTGAATCTTGTTCCA+GGG	0.581743	4:-3503644	MsG0480018337.01.T01:CDS
ACCAAGAGCTATGCTCAGAA+AGG	0.582588	4:-3504742	MsG0480018337.01.T01:CDS
AATCAACCAATTATGTGCGG+TGG	0.594257	4:-3504768	MsG0480018337.01.T01:CDS
TTGGCAGAGGAACTAAGTAA+AGG	0.600606	4:-3503952	MsG0480018337.01.T01:CDS
GTATGATCCAATGGCTAATG+TGG	0.607801	4:-3503598	MsG0480018337.01.T01:CDS
TCAGTGCTAACTACTAAGTG+TGG	0.616075	4:+3503433	None:intergenic
ACAAATGGAGTAGATTGGGA+TGG	0.618203	4:-3504428	MsG0480018337.01.T01:intron
TGGATCATGTCCAATTGAAG+TGG	0.628823	4:-3503571	MsG0480018337.01.T01:CDS
TTTAATCAACCAATTATGTG+CGG	0.634307	4:-3504771	MsG0480018337.01.T01:CDS
GAGCTAGGATCGATGCACCC+TGG	0.654050	4:+3503627	None:intergenic
GCCAATTGAATTCTTTAACG+AGG	0.659443	4:-3504364	MsG0480018337.01.T01:intron
TTAGCCATTGGATCATACAA+GGG	0.708949	4:+3503603	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTATTTCTCTTTTCATA+AGG	-	Chr4:3504390-3504409	MsG0480018337.01.T01:CDS	15.0%
!!!	TATTTTTTTTATGATCAAGA+GGG	+	Chr4:3504196-3504215	None:intergenic	15.0%
!!!	TTATTTTTTTTATGATCAAG+AGG	+	Chr4:3504197-3504216	None:intergenic	15.0%
!!	AATTACATTGGACAAAATTT+CGG	-	Chr4:3503666-3503685	MsG0480018337.01.T01:intron	20.0%
!!	AGATATTTCTTGAACAAAAA+TGG	-	Chr4:3503989-3504008	MsG0480018337.01.T01:intron	20.0%
!!	ATATTTGAATGCTGTATATA+GGG	+	Chr4:3503514-3503533	None:intergenic	20.0%
!!	TTAAATCATTGTAATAGAGT+TGG	-	Chr4:3504502-3504521	MsG0480018337.01.T01:intron	20.0%
!!	TTATAGAAAAATGCTATGAT+TGG	-	Chr4:3504321-3504340	MsG0480018337.01.T01:intron	20.0%
!!!	AATTTGTTAGTACGTAAATA+AGG	-	Chr4:3504731-3504750	MsG0480018337.01.T01:CDS	20.0%
!!!	AGTTTTAATTTTGCATGTTT+AGG	-	Chr4:3503414-3503433	MsG0480018337.01.T01:three_prime_UTR	20.0%
!!!	ATGTATTATTCTTTGTTGTA+GGG	-	Chr4:3504236-3504255	MsG0480018337.01.T01:intron	20.0%
!!!	ATTGGTAATTTATCAAAAGA+AGG	-	Chr4:3504339-3504358	MsG0480018337.01.T01:intron	20.0%
!!!	ATTTTGTCCAATGTAATTTT+AGG	+	Chr4:3503664-3503683	None:intergenic	20.0%
!!!	ATTTTTTTTATGATCAAGAG+GGG	+	Chr4:3504195-3504214	None:intergenic	20.0%
!!!	TTGATTTTCTCATTTACAAA+TGG	-	Chr4:3503769-3503788	MsG0480018337.01.T01:intron	20.0%
!!!	TTGGTAATTTATCAAAAGAA+GGG	-	Chr4:3504340-3504359	MsG0480018337.01.T01:intron	20.0%
!	ATACTAATGGGAAGAAATTA+AGG	-	Chr4:3504828-3504847	MsG0480018337.01.T01:CDS	25.0%
!	ATTTAAAGAGTAACTACAAG+TGG	+	Chr4:3504488-3504507	None:intergenic	25.0%
!	ATTTACAAATGGAGTAGATT+GGG	-	Chr4:3503780-3503799	MsG0480018337.01.T01:intron	25.0%
!	CATATTTGAATGCTGTATAT+AGG	+	Chr4:3503515-3503534	None:intergenic	25.0%
!	CTATGTTACTCAATTTCTAA+CGG	-	Chr4:3503552-3503571	MsG0480018337.01.T01:CDS	25.0%
!	GTTATAACATGAAGATTAGA+TGG	-	Chr4:3504049-3504068	MsG0480018337.01.T01:intron	25.0%
!	TGGTAATTTATCAAAAGAAG+GGG	-	Chr4:3504341-3504360	MsG0480018337.01.T01:intron	25.0%
!	TTTAATCAACCAATTATGTG+CGG	-	Chr4:3503441-3503460	MsG0480018337.01.T01:three_prime_UTR	25.0%
!!	AGATTAGATGGTTTAGATTT+TGG	-	Chr4:3504061-3504080	MsG0480018337.01.T01:intron	25.0%
!!	CATGTATTATTCTTTGTTGT+AGG	-	Chr4:3504235-3504254	MsG0480018337.01.T01:intron	25.0%
!!!	GTTTTGACCTAAAATTACAT+TGG	-	Chr4:3503654-3503673	MsG0480018337.01.T01:CDS	25.0%
!!!	TTTAATTTTGCATGTTTAGG+TGG	-	Chr4:3503417-3503436	MsG0480018337.01.T01:three_prime_UTR	25.0%
	ACCTCGTTAAAGAATTCAAT+TGG	+	Chr4:3503852-3503871	None:intergenic	30.0%
	AGTAACATAGTACCATGTTT+AGG	+	Chr4:3503542-3503561	None:intergenic	30.0%
	ATTAAGTGACACTGTAATTG+TGG	+	Chr4:3503614-3503633	None:intergenic	30.0%
	CAAATATGTGTTCCTAAACA+TGG	-	Chr4:3503527-3503546	MsG0480018337.01.T01:three_prime_UTR	30.0%
	CATTTACAAATGGAGTAGAT+TGG	-	Chr4:3503779-3503798	MsG0480018337.01.T01:intron	30.0%
	GCCATTAGATGAAGATTAAA+CGG	+	Chr4:3504127-3504146	None:intergenic	30.0%
	GTTTAATCTTCATCTAATGG+CGG	-	Chr4:3504126-3504145	MsG0480018337.01.T01:intron	30.0%
	TTCCCATTAGTATAGTAGAA+GGG	+	Chr4:3504821-3504840	None:intergenic	30.0%
!	ATGGTCGAAAAAATCTTTTC+AGG	-	Chr4:3504536-3504555	MsG0480018337.01.T01:intron	30.0%
!	TGGTCGAAAAAATCTTTTCA+GGG	-	Chr4:3504537-3504556	MsG0480018337.01.T01:intron	30.0%
	ATGTTGAATTGACAGTGAGT+TGG	-	Chr4:3503588-3503607	MsG0480018337.01.T01:CDS	35.0%
	ATTAGCCATTGGATCATACA+AGG	+	Chr4:3504613-3504632	None:intergenic	35.0%
	CTTCCCATTAGTATAGTAGA+AGG	+	Chr4:3504822-3504841	None:intergenic	35.0%
	GAATCAGAATCCACTTCAAT+TGG	+	Chr4:3504654-3504673	None:intergenic	35.0%
	GCCAATTGAATTCTTTAACG+AGG	-	Chr4:3503848-3503867	MsG0480018337.01.T01:intron	35.0%
	GCCGTTTAATCTTCATCTAA+TGG	-	Chr4:3504123-3504142	MsG0480018337.01.T01:intron	35.0%
	GTCCCTTCTACTATACTAAT+GGG	-	Chr4:3504816-3504835	MsG0480018337.01.T01:CDS	35.0%
	GTTATAACTGAGATTGCAAG+TGG	+	Chr4:3504037-3504056	None:intergenic	35.0%
	TACACTATTTCACGACTACA+AGG	-	Chr4:3504161-3504180	MsG0480018337.01.T01:intron	35.0%
	TGGGAAGAAATTAAGGTTCA+AGG	-	Chr4:3504835-3504854	MsG0480018337.01.T01:CDS	35.0%
	TGTCCCTTCTACTATACTAA+TGG	-	Chr4:3504815-3504834	MsG0480018337.01.T01:CDS	35.0%
	TTAGCCATTGGATCATACAA+GGG	+	Chr4:3504612-3504631	None:intergenic	35.0%
!	TAGTAGTTAGCACTGAACTT+TGG	-	Chr4:3504786-3504805	MsG0480018337.01.T01:CDS	35.0%
!	TTATTCTTTGTTGTAGGGCT+TGG	-	Chr4:3504241-3504260	MsG0480018337.01.T01:intron	35.0%
!!	AGAATTCAATTGGCTTGTTC+TGG	+	Chr4:3503842-3503861	None:intergenic	35.0%
!!!	AGAGTTGGTTTTCTAAACGA+TGG	-	Chr4:3504517-3504536	MsG0480018337.01.T01:intron	35.0%
	AATCAACCAATTATGTGCGG+TGG	-	Chr4:3503444-3503463	MsG0480018337.01.T01:three_prime_UTR	40.0%
	AATTACAACAGCATGCATGC+TGG	+	Chr4:3504715-3504734	None:intergenic	40.0%
	ACAAATGGAGTAGATTGGGA+TGG	-	Chr4:3503784-3503803	MsG0480018337.01.T01:intron	40.0%
	GTATGATCCAATGGCTAATG+TGG	-	Chr4:3504614-3504633	MsG0480018337.01.T01:intron	40.0%
	TCAGTGCTAACTACTAAGTG+TGG	+	Chr4:3504782-3504801	None:intergenic	40.0%
	TCTATAACAGCAGTTGTGTC+TGG	+	Chr4:3504308-3504327	None:intergenic	40.0%
	TGGACTTGATTGCCAGTATA+TGG	+	Chr4:3503811-3503830	None:intergenic	40.0%
	TGGATCATGTCCAATTGAAG+TGG	-	Chr4:3504641-3504660	MsG0480018337.01.T01:intron	40.0%
	TTGGCAGAGGAACTAAGTAA+AGG	-	Chr4:3504260-3504279	MsG0480018337.01.T01:intron	40.0%
!!	TCAATTGGCTTGTTCTGGTA+AGG	+	Chr4:3503837-3503856	None:intergenic	40.0%
	ACCAAGAGCTATGCTCAGAA+AGG	-	Chr4:3503470-3503489	MsG0480018337.01.T01:three_prime_UTR	45.0%
	CCAATGGCTAATGTGGATGA+TGG	-	Chr4:3504621-3504640	MsG0480018337.01.T01:intron	45.0%
	CCATCATCCACATTAGCCAT+TGG	+	Chr4:3504624-3504643	None:intergenic	45.0%
	GATTGGGATGGTCCATATAC+TGG	-	Chr4:3503796-3503815	MsG0480018337.01.T01:intron	45.0%
	GCGAACTGAATCTTGTTCCA+GGG	-	Chr4:3504568-3504587	MsG0480018337.01.T01:intron	45.0%
	GCTATGCTCAGAAAGGATAG+AGG	-	Chr4:3503477-3503496	MsG0480018337.01.T01:three_prime_UTR	45.0%
	TCCTTTCTGAGCATAGCTCT+TGG	+	Chr4:3503474-3503493	None:intergenic	45.0%
	TGCGAACTGAATCTTGTTCC+AGG	-	Chr4:3504567-3504586	MsG0480018337.01.T01:intron	45.0%
!!	GGCTTGTTCTGGTAAGGTTT+TGG	+	Chr4:3503831-3503850	None:intergenic	45.0%
!!	AATAAATAATAATAACTTAA+TGG	-	Chr4:3504212-3504231	MsG0480018337.01.T01:intron	5.0%
	CTCGCCCTTGTATGATCCAA+TGG	-	Chr4:3504605-3504624	MsG0480018337.01.T01:intron	50.0%
	GGTTCACCACCGCACATAAT+TGG	+	Chr4:3503453-3503472	None:intergenic	50.0%
!	TTTGTTGTAGGGCTTGGCAG+AGG	-	Chr4:3504247-3504266	MsG0480018337.01.T01:intron	50.0%
	GGATCATACAAGGGCGAGCT+AGG	+	Chr4:3504603-3504622	None:intergenic	55.0%
	GAGCTAGGATCGATGCACCC+TGG	+	Chr4:3504588-3504607	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	3503369	3504865	3503369	ID=MsG0480018337.01;Name=MsG0480018337.01
Chr4	mRNA	3503369	3504865	3503369	ID=MsG0480018337.01.T01;Parent=MsG0480018337.01;Name=MsG0480018337.01.T01;_AED=0.44;_eAED=0.49;_QI=0\|0.25\|0.2\|1\|0\|0\|5\|182\|171
Chr4	exon	3503369	3503676	3503369	ID=MsG0480018337.01.T01:exon:1008;Parent=MsG0480018337.01.T01
Chr4	exon	3503813	3503822	3503813	ID=MsG0480018337.01.T01:exon:1007;Parent=MsG0480018337.01.T01
Chr4	exon	3503892	3503977	3503892	ID=MsG0480018337.01.T01:exon:1006;Parent=MsG0480018337.01.T01
Chr4	exon	3504365	3504437	3504365	ID=MsG0480018337.01.T01:exon:1005;Parent=MsG0480018337.01.T01
Chr4	exon	3504645	3504865	3504645	ID=MsG0480018337.01.T01:exon:1004;Parent=MsG0480018337.01.T01
Chr4	CDS	3504645	3504865	3504645	ID=MsG0480018337.01.T01:cds;Parent=MsG0480018337.01.T01
Chr4	CDS	3504365	3504437	3504365	ID=MsG0480018337.01.T01:cds;Parent=MsG0480018337.01.T01
Chr4	CDS	3503892	3503977	3503892	ID=MsG0480018337.01.T01:cds;Parent=MsG0480018337.01.T01
Chr4	CDS	3503813	3503822	3503813	ID=MsG0480018337.01.T01:cds;Parent=MsG0480018337.01.T01
Chr4	CDS	3503551	3503676	3503551	ID=MsG0480018337.01.T01:cds;Parent=MsG0480018337.01.T01
Chr4	three_prime_UTR	3503369	3503550	3503369	ID=MsG0480018337.01.T01:three_prime_utr;Parent=MsG0480018337.01.T01

Gene Sequence

>MsG0480018337.01.T01

ATGTTAGTGTTTTGTCTTCATTTTGCTGTTATTTTTCTCAAATTGAGTTTTAATTTTGCATGTTTAGGTGGTTTTAATCAACCAATTATGTGCGGTGGTGAACCAAGAGCTATGCTCAGAAAGGATAGAGGCAAAGCTGATTCCCTATATACAGCATTCAAATATGTGTTCCTAAACATGGTACTATGTTACTCAATTTCTAACGGTATGTCATTCAGTATATTGGGATGGTCCATATACTGGCAATCAAGTCCAAAACCTTACCAGAACAAGCCAATTGAATTCTTTAACGAGGGCTTGGCAGAGGAACTAAGTAAAGGAGCATGTGAACAAGCAATATTTCCAGACACAACTGCTGTTATAGAAAAATGCTATGATTGGAAACATTATGGTGATCGCTGCGAACTGAATCTTGTTCCAGGGTGCATCGATCCTAGCTCGCCCTTGTATGATCCAATGGCTAATGTGGATGATGGATCATGTCCAATTGAAGTGGATTCTGATTCTGATGAATAA

Protein sequence

>MsG0480018337.01.T01

MLVFCLHFAVIFLKLSFNFACLGGFNQPIMCGGEPRAMLRKDRGKADSLYTAFKYVFLNMVLCYSISNGMSFSILGWSIYWQSSPKPYQNKPIEFFNEGLAEELSKGACEQAIFPDTTAVIEKCYDWKHYGDRCELNLVPGCIDPSSPLYDPMANVDDGSCPIEVDSDSDE*