Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046124.01.T01 | XP_003608666.1 | 98.089 | 314 | 6 | 0 | 18 | 331 | 44 | 357 | 0 | 646 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046124.01.T01 | Q8L7W2 | 67.34 | 297 | 85 | 3 | 44 | 328 | 67 | 363 | 9.51E-149 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046124.01.T01 | G7JHP2 | 98.089 | 314 | 6 | 0 | 18 | 331 | 44 | 357 | 0.0 | 646 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049070.01 | MsG0880046124.01 | 0.841230 | 5.388882e-58 | 7.866319e-55 |
| MsG0180000040.01 | MsG0880046124.01 | 0.801764 | 7.718455e-49 | 3.716452e-46 |
| MsG0180000942.01 | MsG0880046124.01 | 0.843171 | 1.650936e-58 | 2.561096e-55 |
| MsG0180000976.01 | MsG0880046124.01 | 0.837617 | 4.677364e-57 | 6.109691e-54 |
| MsG0180001548.01 | MsG0880046124.01 | 0.863702 | 2.060868e-64 | 6.306621e-61 |
| MsG0180002449.01 | MsG0880046124.01 | 0.816036 | 6.800838e-52 | 4.766443e-49 |
| MsG0880045031.01 | MsG0880046124.01 | 0.835209 | 1.916523e-56 | 2.327767e-53 |
| MsG0880045312.01 | MsG0880046124.01 | 0.815513 | 8.893798e-52 | 6.144786e-49 |
| MsG0880046124.01 | MsG0880047275.01 | 0.838496 | 2.778806e-57 | 3.728450e-54 |
| MsG0180003196.01 | MsG0880046124.01 | 0.802650 | 5.072534e-49 | 2.498173e-46 |
| MsG0180004687.01 | MsG0880046124.01 | 0.819450 | 1.154324e-52 | 8.885997e-50 |
| MsG0180006028.01 | MsG0880046124.01 | 0.810820 | 9.530551e-51 | 5.803920e-48 |
| MsG0780040684.01 | MsG0880046124.01 | 0.808715 | 2.703007e-50 | 1.556613e-47 |
| MsG0780041331.01 | MsG0880046124.01 | 0.831706 | 1.433565e-55 | 1.568261e-52 |
| MsG0880042086.01 | MsG0880046124.01 | 0.854201 | 1.440615e-61 | 3.193087e-58 |
| MsG0880042278.01 | MsG0880046124.01 | 0.806064 | 9.862586e-50 | 5.302454e-47 |
| MsG0880042415.01 | MsG0880046124.01 | 0.887561 | 1.280618e-72 | 9.570815e-69 |
| MsG0880042416.01 | MsG0880046124.01 | 0.802087 | 6.626471e-49 | 3.217091e-46 |
| MsG0880043107.01 | MsG0880046124.01 | 0.825575 | 4.350721e-54 | 3.980974e-51 |
| MsG0380012868.01 | MsG0880046124.01 | 0.814855 | 1.245536e-51 | 8.451791e-49 |
| MsG0680032850.01 | MsG0880046124.01 | 0.812835 | 3.470947e-51 | 2.229913e-48 |
| MsG0480019644.01 | MsG0880046124.01 | 0.812017 | 5.238736e-51 | 3.293083e-48 |
| MsG0480019812.01 | MsG0880046124.01 | 0.813066 | 3.088802e-51 | 1.996749e-48 |
| MsG0480020473.01 | MsG0880046124.01 | 0.804137 | 2.495808e-49 | 1.276916e-46 |
| MsG0480020596.01 | MsG0880046124.01 | 0.813055 | 3.106276e-51 | 2.007460e-48 |
| MsG0480021101.01 | MsG0880046124.01 | 0.822236 | 2.638578e-53 | 2.195806e-50 |
| MsG0480021124.01 | MsG0880046124.01 | 0.856794 | 2.528343e-62 | 6.104669e-59 |
| MsG0480021213.01 | MsG0880046124.01 | 0.807134 | 5.863140e-50 | 3.239856e-47 |
| MsG0480022154.01 | MsG0880046124.01 | 0.852101 | 5.757603e-61 | 1.190306e-57 |
| MsG0480022162.01 | MsG0880046124.01 | 0.838224 | 3.264907e-57 | 4.344192e-54 |
| MsG0480022240.01 | MsG0880046124.01 | 0.834534 | 2.835006e-56 | 3.374316e-53 |
| MsG0580024471.01 | MsG0880046124.01 | 0.809073 | 2.265287e-50 | 1.317139e-47 |
| MsG0580024597.01 | MsG0880046124.01 | 0.802205 | 6.265580e-49 | 3.050911e-46 |
| MsG0580024598.01 | MsG0880046124.01 | 0.843902 | 1.052901e-58 | 1.671733e-55 |
| MsG0580024601.01 | MsG0880046124.01 | 0.827947 | 1.180888e-54 | 1.157056e-51 |
| MsG0580025610.01 | MsG0880046124.01 | 0.830545 | 2.764787e-55 | 2.921880e-52 |
| MsG0380017014.01 | MsG0880046124.01 | -0.827593 | 1.436097e-54 | 1.392512e-51 |
| MsG0380017427.01 | MsG0880046124.01 | 0.813177 | 2.921161e-51 | 1.893989e-48 |
| MsG0380017793.01 | MsG0880046124.01 | 0.810869 | 9.302733e-51 | 5.672628e-48 |
| MsG0480018337.01 | MsG0880046124.01 | 0.870685 | 1.210933e-66 | 4.752127e-63 |
| MsG0480018338.01 | MsG0880046124.01 | 0.837276 | 5.719913e-57 | 7.392380e-54 |
| MsG0480018345.01 | MsG0880046124.01 | 0.810610 | 1.058119e-50 | 6.407508e-48 |
| MsG0580027183.01 | MsG0880046124.01 | 0.825456 | 4.642401e-54 | 4.233360e-51 |
| MsG0580028419.01 | MsG0880046124.01 | 0.805383 | 1.370911e-49 | 7.242479e-47 |
| MsG0580028422.01 | MsG0880046124.01 | 0.814058 | 1.869098e-51 | 1.241292e-48 |
| MsG0280008343.01 | MsG0880046124.01 | 0.834794 | 2.439109e-56 | 2.925216e-53 |
| MsG0780035965.01 | MsG0880046124.01 | 0.804169 | 2.458182e-49 | 1.258686e-46 |
| MsG0780036620.01 | MsG0880046124.01 | 0.837278 | 5.711295e-57 | 7.381930e-54 |
| MsG0780037351.01 | MsG0880046124.01 | 0.817012 | 4.111403e-52 | 2.959567e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046124.01.T01 | MTR_4g100480 | 98.089 | 314 | 6 | 0 | 18 | 331 | 44 | 357 | 0.0 | 646 |
| MsG0880046124.01.T01 | MTR_2g026715 | 44.951 | 307 | 164 | 3 | 25 | 327 | 14 | 319 | 1.88e-92 | 278 |
| MsG0880046124.01.T01 | MTR_3g460790 | 50.775 | 258 | 126 | 1 | 65 | 322 | 25 | 281 | 2.00e-89 | 269 |
| MsG0880046124.01.T01 | MTR_3g082770 | 50.420 | 238 | 117 | 1 | 65 | 302 | 80 | 316 | 1.66e-86 | 264 |
| MsG0880046124.01.T01 | MTR_4g133945 | 48.235 | 255 | 131 | 1 | 65 | 318 | 12 | 266 | 1.29e-85 | 259 |
| MsG0880046124.01.T01 | MTR_8g091995 | 50.198 | 253 | 124 | 2 | 70 | 322 | 23 | 273 | 4.12e-84 | 256 |
| MsG0880046124.01.T01 | MTR_3g460790 | 56.281 | 199 | 86 | 1 | 65 | 263 | 25 | 222 | 7.73e-76 | 233 |
| MsG0880046124.01.T01 | MTR_2g026715 | 50.000 | 178 | 88 | 1 | 50 | 227 | 56 | 232 | 5.16e-61 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046124.01.T01 | AT5G47240 | 67.340 | 297 | 85 | 3 | 44 | 328 | 67 | 363 | 9.70e-150 | 426 |
| MsG0880046124.01.T01 | AT5G47240 | 61.350 | 326 | 85 | 4 | 44 | 328 | 67 | 392 | 7.44e-143 | 409 |
| MsG0880046124.01.T01 | AT4G25434 | 48.627 | 255 | 130 | 1 | 65 | 319 | 19 | 272 | 3.12e-86 | 261 |
| MsG0880046124.01.T01 | AT5G47650 | 49.225 | 258 | 128 | 2 | 65 | 322 | 19 | 273 | 1.07e-85 | 259 |
| MsG0880046124.01.T01 | AT5G47650 | 49.225 | 258 | 128 | 2 | 65 | 322 | 19 | 273 | 1.07e-85 | 259 |
| MsG0880046124.01.T01 | AT5G47650 | 49.225 | 258 | 128 | 2 | 65 | 322 | 19 | 273 | 1.07e-85 | 259 |
| MsG0880046124.01.T01 | AT5G47650 | 48.669 | 263 | 132 | 2 | 65 | 327 | 66 | 325 | 1.22e-84 | 258 |
| MsG0880046124.01.T01 | AT5G47650 | 49.225 | 258 | 128 | 2 | 65 | 322 | 65 | 319 | 1.31e-84 | 258 |
| MsG0880046124.01.T01 | AT4G25434 | 47.059 | 255 | 129 | 2 | 65 | 319 | 19 | 267 | 1.20e-80 | 247 |
| MsG0880046124.01.T01 | AT4G25434 | 43.972 | 282 | 130 | 2 | 65 | 319 | 19 | 299 | 1.70e-80 | 248 |
| MsG0880046124.01.T01 | AT2G04430 | 48.750 | 240 | 119 | 3 | 65 | 300 | 10 | 249 | 3.92e-75 | 233 |
| MsG0880046124.01.T01 | AT4G25434 | 42.553 | 282 | 129 | 3 | 65 | 319 | 19 | 294 | 5.30e-75 | 233 |
| MsG0880046124.01.T01 | AT2G04430 | 48.750 | 240 | 119 | 3 | 65 | 300 | 29 | 268 | 1.14e-74 | 232 |
| MsG0880046124.01.T01 | AT4G25434 | 53.266 | 199 | 92 | 1 | 65 | 263 | 19 | 216 | 1.06e-73 | 227 |
| MsG0880046124.01.T01 | AT4G12720 | 46.124 | 258 | 135 | 4 | 65 | 320 | 10 | 265 | 1.96e-72 | 226 |
| MsG0880046124.01.T01 | AT4G12720 | 46.124 | 258 | 135 | 4 | 65 | 320 | 10 | 265 | 1.96e-72 | 226 |
| MsG0880046124.01.T01 | AT4G12720 | 46.124 | 258 | 135 | 4 | 65 | 320 | 10 | 265 | 1.96e-72 | 226 |
| MsG0880046124.01.T01 | AT4G25434 | 50.761 | 197 | 97 | 0 | 123 | 319 | 31 | 227 | 1.12e-68 | 215 |
| MsG0880046124.01.T01 | AT4G25434 | 50.761 | 197 | 97 | 0 | 123 | 319 | 31 | 227 | 1.12e-68 | 215 |
| MsG0880046124.01.T01 | AT4G25434 | 51.256 | 199 | 91 | 2 | 65 | 263 | 19 | 211 | 3.44e-68 | 213 |
| MsG0880046124.01.T01 | AT4G25434 | 46.903 | 226 | 92 | 2 | 65 | 263 | 19 | 243 | 3.55e-68 | 214 |
| MsG0880046124.01.T01 | AT2G04450 | 44.656 | 262 | 140 | 5 | 62 | 320 | 7 | 266 | 6.53e-67 | 212 |
| MsG0880046124.01.T01 | AT4G12720 | 40.067 | 297 | 134 | 5 | 65 | 319 | 10 | 304 | 2.34e-64 | 206 |
| MsG0880046124.01.T01 | AT4G25434 | 48.731 | 197 | 96 | 1 | 123 | 319 | 31 | 222 | 2.71e-63 | 201 |
| MsG0880046124.01.T01 | AT4G12720 | 50.746 | 201 | 96 | 3 | 65 | 263 | 10 | 209 | 1.28e-61 | 196 |
| MsG0880046124.01.T01 | AT4G25434 | 53.704 | 162 | 74 | 1 | 65 | 226 | 19 | 179 | 6.78e-59 | 189 |
| MsG0880046124.01.T01 | AT4G25434 | 43.478 | 207 | 90 | 1 | 140 | 319 | 1 | 207 | 9.44e-54 | 176 |
| MsG0880046124.01.T01 | AT4G25434 | 46.032 | 189 | 74 | 2 | 65 | 226 | 19 | 206 | 2.28e-53 | 176 |
| MsG0880046124.01.T01 | AT4G12720 | 46.154 | 182 | 95 | 3 | 140 | 319 | 1 | 181 | 2.05e-46 | 156 |
| MsG0880046124.01.T01 | AT2G04440 | 47.143 | 140 | 73 | 1 | 65 | 203 | 10 | 149 | 1.19e-37 | 134 |
Find 111 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGTTCCCATTGTATTAA+TGG | 0.183525 | 8:+69387993 | MsG0880046124.01.T01:CDS |
| ATCCCAAAGGGTTATTGTTT+TGG | 0.217640 | 8:-69390786 | None:intergenic |
| CATTGTTCTCCTGCAACTTT+TGG | 0.233622 | 8:+69389134 | MsG0880046124.01.T01:CDS |
| TGCCTCAGATGACACTTATT+TGG | 0.255967 | 8:+69387929 | MsG0880046124.01.T01:CDS |
| TGCAGGGAAAGAAGGGAATT+TGG | 0.271776 | 8:+69388244 | MsG0880046124.01.T01:intron |
| GGATTGTGTGGTAACCTATT+TGG | 0.272788 | 8:-69388092 | None:intergenic |
| AGACTAAACTCCTTATTATC+AGG | 0.280925 | 8:-69387758 | None:intergenic |
| GATATGTGATGTTAACTTAC+TGG | 0.280931 | 8:+69388875 | MsG0880046124.01.T01:CDS |
| AGTTTATCATCTTTAATTTC+AGG | 0.305261 | 8:+69387885 | MsG0880046124.01.T01:intron |
| AGTCTATAGGGATTGGGCCT+GGG | 0.313505 | 8:+69390757 | MsG0880046124.01.T01:three_prime_UTR |
| ATTAGACTTGTTCCTCATTT+CGG | 0.315027 | 8:+69390361 | MsG0880046124.01.T01:three_prime_UTR |
| GGGAAATGACCCTGATAATA+AGG | 0.323454 | 8:+69387748 | None:intergenic |
| TAAATTACCTTGACAGCAAC+TGG | 0.331130 | 8:-69388300 | None:intergenic |
| AGAGAAGTGAAGGAAGAAAC+TGG | 0.340232 | 8:+69389554 | MsG0880046124.01.T01:CDS |
| ATGGAATCTTCTTGTATTAG+TGG | 0.340759 | 8:-69390029 | None:intergenic |
| TTGTTGAAGTCATAGCATTC+AGG | 0.346192 | 8:+69389734 | MsG0880046124.01.T01:CDS |
| TTGAAATTGAAGGAGCAAAA+TGG | 0.347302 | 8:+69389979 | MsG0880046124.01.T01:CDS |
| TTCCAAAGGCCAAAAGTTGC+AGG | 0.348465 | 8:-69389143 | None:intergenic |
| GTCAAAGACATTATAGTATA+GGG | 0.352247 | 8:-69390153 | None:intergenic |
| CAAGTAGTTTCCAAGTTTGA+TGG | 0.355833 | 8:+69390119 | MsG0880046124.01.T01:CDS |
| TTCCAAAACAATAACCCTTT+GGG | 0.357771 | 8:+69390784 | MsG0880046124.01.T01:three_prime_UTR |
| GGAAGCATGCAAGGTCCTTC+AGG | 0.363281 | 8:-69388901 | None:intergenic |
| AGTTCATAATGTTTAATGAT+TGG | 0.367350 | 8:-69390841 | None:intergenic |
| ATTCCAAAACAATAACCCTT+TGG | 0.371130 | 8:+69390783 | MsG0880046124.01.T01:three_prime_UTR |
| TGTCAAAGACATTATAGTAT+AGG | 0.374450 | 8:-69390154 | None:intergenic |
| ACAAGATCAGATTGCTCTAT+AGG | 0.380012 | 8:-69388276 | None:intergenic |
| GGATTCTCATTGATCCAAAT+AGG | 0.382227 | 8:+69388078 | MsG0880046124.01.T01:CDS |
| TAACCCTTTGGGATATTGTA+TGG | 0.382678 | 8:+69390795 | MsG0880046124.01.T01:three_prime_UTR |
| ACTGTGTTGGAAAATAATTT+AGG | 0.384026 | 8:+69390189 | MsG0880046124.01.T01:exon |
| CCCTTGTAGTGAAGTCTATA+GGG | 0.391049 | 8:+69390745 | MsG0880046124.01.T01:three_prime_UTR |
| GCCCTTGTAGTGAAGTCTAT+AGG | 0.397908 | 8:+69390744 | MsG0880046124.01.T01:three_prime_UTR |
| AGCATAGATGCAAAGGCATA+TGG | 0.400461 | 8:-69388113 | None:intergenic |
| ACTTGATGTGATGCATTTGC+TGG | 0.407708 | 8:-69388922 | None:intergenic |
| AAGTCTATAGGGATTGGGCC+TGG | 0.412009 | 8:+69390756 | MsG0880046124.01.T01:three_prime_UTR |
| GATATCTTTATTGCTCGTCT+TGG | 0.413439 | 8:+69390068 | MsG0880046124.01.T01:CDS |
| GAGATTATCAACACAATTAG+TGG | 0.415260 | 8:+69390637 | MsG0880046124.01.T01:three_prime_UTR |
| GATGCCTTTGATGATGAGTA+TGG | 0.416511 | 8:+69388053 | MsG0880046124.01.T01:CDS |
| ACTTGTTCCTCATTTCGGTT+TGG | 0.432991 | 8:+69390366 | MsG0880046124.01.T01:three_prime_UTR |
| ATATCTTTATTGCTCGTCTT+GGG | 0.440305 | 8:+69390069 | MsG0880046124.01.T01:CDS |
| AAATCAGCATGTATATTTGA+AGG | 0.442552 | 8:+69390457 | MsG0880046124.01.T01:three_prime_UTR |
| GTTTATCATCTTTAATTTCA+GGG | 0.445007 | 8:+69387886 | MsG0880046124.01.T01:intron |
| GGCCTTTGGAAAATACCAAC+TGG | 0.452052 | 8:+69389155 | MsG0880046124.01.T01:CDS |
| CAATACCACCATGCAGAGCC+AGG | 0.462871 | 8:+69388853 | MsG0880046124.01.T01:CDS |
| GTCTATAGGGATTGGGCCTG+GGG | 0.463455 | 8:+69390758 | MsG0880046124.01.T01:three_prime_UTR |
| TAGTGAAGTCTATAGGGATT+GGG | 0.467407 | 8:+69390751 | MsG0880046124.01.T01:three_prime_UTR |
| AGTTGATCCATTAATACAAT+GGG | 0.469605 | 8:-69388000 | None:intergenic |
| CAGGCAGAGGAGATTTATAC+AGG | 0.482585 | 8:+69389524 | MsG0880046124.01.T01:intron |
| GATATGATTTGTTCCATTGG+CGG | 0.485425 | 8:+69390703 | MsG0880046124.01.T01:three_prime_UTR |
| TAAGTTAACATCACATATCC+TGG | 0.491360 | 8:-69388871 | None:intergenic |
| GCATCACATCAAGTCGGAAT+CGG | 0.491928 | 8:+69388931 | MsG0880046124.01.T01:CDS |
| GGACATCAATAGTAGTGTAT+TGG | 0.497750 | 8:-69390230 | None:intergenic |
| TCACTACAAGGGCACAGGTT+CGG | 0.499762 | 8:-69390734 | None:intergenic |
| GTAGTGAAGTCTATAGGGAT+TGG | 0.502250 | 8:+69390750 | MsG0880046124.01.T01:three_prime_UTR |
| TTCGGACGCTGCGCCGCCAA+TGG | 0.505567 | 8:-69390716 | None:intergenic |
| AGGGATATGATTTGTTCCAT+TGG | 0.505884 | 8:+69390700 | MsG0880046124.01.T01:three_prime_UTR |
| TTTGTCTATCTCTTTCTCAC+TGG | 0.506534 | 8:+69388135 | MsG0880046124.01.T01:CDS |
| GTGGATGATCTTGAAATTGA+AGG | 0.507225 | 8:+69389969 | MsG0880046124.01.T01:CDS |
| TTCAATAAAATACAAGATGA+AGG | 0.508700 | 8:-69390424 | None:intergenic |
| TCTTGTTCCAGTTGCTGTCA+AGG | 0.509061 | 8:+69388293 | MsG0880046124.01.T01:CDS |
| CTACTTTCCAAACCGAAATG+AGG | 0.515915 | 8:-69390373 | None:intergenic |
| GAGAAGTGAAGGAAGAAACT+GGG | 0.516226 | 8:+69389555 | MsG0880046124.01.T01:CDS |
| AGGAGCTGTAAGAGAAGTGA+AGG | 0.519985 | 8:+69389544 | MsG0880046124.01.T01:CDS |
| ATATCAATAAAGAGTTGCTA+TGG | 0.528372 | 8:+69390325 | MsG0880046124.01.T01:three_prime_UTR |
| GATCAGACAACGGTCGGAGT+TGG | 0.538110 | 8:+69390529 | MsG0880046124.01.T01:three_prime_UTR |
| TTATATGTTACATATTCTAC+CGG | 0.542353 | 8:-69390251 | None:intergenic |
| AAGTTGATCCATTAATACAA+TGG | 0.544572 | 8:-69388001 | None:intergenic |
| TCTCAGTGATGCAATGAGAA+AGG | 0.548908 | 8:-69390616 | None:intergenic |
| CATCCATACAATATCCCAAA+GGG | 0.553358 | 8:-69390798 | None:intergenic |
| GAATATGTAACATATAATTG+AGG | 0.554318 | 8:+69390257 | MsG0880046124.01.T01:three_prime_UTR |
| ATCTACAATCTTCTTGAACA+TGG | 0.556041 | 8:-69390048 | None:intergenic |
| TCTTTCTCACTGGAAAAGAA+TGG | 0.560278 | 8:+69388145 | MsG0880046124.01.T01:CDS |
| CGTCTTGGGAAACGTTATTG+TGG | 0.560922 | 8:+69390083 | MsG0880046124.01.T01:CDS |
| AAGAGTTGCTATGGAACATG+AGG | 0.567194 | 8:+69390334 | MsG0880046124.01.T01:three_prime_UTR |
| AATGATGATTCCAACTGTGT+TGG | 0.569974 | 8:+69390176 | MsG0880046124.01.T01:CDS |
| TCCCTATAGACTTCACTACA+AGG | 0.574116 | 8:-69390746 | None:intergenic |
| TGTGACGTCGAGTAGAATGA+TGG | 0.575578 | 8:+69390570 | MsG0880046124.01.T01:three_prime_UTR |
| CCCTCCATACTCATCATCAA+AGG | 0.576216 | 8:-69388057 | None:intergenic |
| ACCTCATGAATGAATCCAGT+TGG | 0.579034 | 8:-69389170 | None:intergenic |
| TAGACAAAGCATAGATGCAA+AGG | 0.579845 | 8:-69388120 | None:intergenic |
| GACTAAACTCCTTATTATCA+GGG | 0.581803 | 8:-69387757 | None:intergenic |
| CAAATTTGTAAAGGTGCTTG+TGG | 0.584011 | 8:+69389100 | MsG0880046124.01.T01:intron |
| GCATTTGCTGGAAGCATGCA+AGG | 0.587186 | 8:-69388910 | None:intergenic |
| TCACATATCCTGGCTCTGCA+TGG | 0.590682 | 8:-69388861 | None:intergenic |
| ATGCGGTGATTGACTACTAG+AGG | 0.595045 | 8:+69390680 | MsG0880046124.01.T01:three_prime_UTR |
| AGACTTCACTACAAGGGCAC+AGG | 0.595378 | 8:-69390739 | None:intergenic |
| AATACACTACTATTGATGTC+CGG | 0.596781 | 8:+69390232 | MsG0880046124.01.T01:three_prime_UTR |
| TTAACTTACTGGATTCCTGA+AGG | 0.599287 | 8:+69388886 | MsG0880046124.01.T01:CDS |
| AGAAGTGAAGGAAGAAACTG+GGG | 0.603388 | 8:+69389556 | MsG0880046124.01.T01:CDS |
| TCACATCAAGTCGGAATCGG+AGG | 0.616036 | 8:+69388934 | MsG0880046124.01.T01:CDS |
| CCTTTGATGATGAGTATGGA+GGG | 0.620814 | 8:+69388057 | MsG0880046124.01.T01:CDS |
| ACAGTGATCGTAGATGATAG+TGG | 0.623914 | 8:-69389948 | None:intergenic |
| TGCGGTGATTGACTACTAGA+GGG | 0.629843 | 8:+69390681 | MsG0880046124.01.T01:three_prime_UTR |
| TGCTCTACAAACTCAACCAG+TGG | 0.632663 | 8:-69390005 | None:intergenic |
| CCCTATAGACTTCACTACAA+GGG | 0.642372 | 8:-69390745 | None:intergenic |
| AGGAGCAAAATGGATGCCAC+TGG | 0.654186 | 8:+69389989 | MsG0880046124.01.T01:CDS |
| CATATCCTGGCTCTGCATGG+TGG | 0.655970 | 8:-69388858 | None:intergenic |
| AAGTTGATTAGTGACTGATA+CGG | 0.658654 | 8:+69390502 | MsG0880046124.01.T01:three_prime_UTR |
| TTCTAGGCATGTACACAATG+TGG | 0.663546 | 8:+69389884 | MsG0880046124.01.T01:intron |
| GGAGTGGATCAGACAACGGT+CGG | 0.664502 | 8:+69390523 | MsG0880046124.01.T01:three_prime_UTR |
| TAATAAGGAGTTTAGTCTCG+AGG | 0.664674 | 8:+69387763 | MsG0880046124.01.T01:CDS |
| GCAAATGCATCACATCAAGT+CGG | 0.666360 | 8:+69388925 | MsG0880046124.01.T01:CDS |
| GATTAGTGACTGATACGGAG+TGG | 0.667516 | 8:+69390507 | MsG0880046124.01.T01:three_prime_UTR |
| ACATCCATACAATATCCCAA+AGG | 0.668022 | 8:-69390799 | None:intergenic |
| GCCTTTGATGATGAGTATGG+AGG | 0.668533 | 8:+69388056 | MsG0880046124.01.T01:CDS |
| AGAGTTGCTATGGAACATGA+GGG | 0.669158 | 8:+69390335 | MsG0880046124.01.T01:three_prime_UTR |
| ACCAACTGGATTCATTCATG+AGG | 0.669787 | 8:+69389169 | MsG0880046124.01.T01:CDS |
| TGCCAAATAAGTGTCATCTG+AGG | 0.672505 | 8:-69387931 | None:intergenic |
| GCAAAGGCATATGGATTGTG+TGG | 0.674954 | 8:-69388104 | None:intergenic |
| ACTATCTGATGACGATCATG+CGG | 0.694765 | 8:+69390663 | MsG0880046124.01.T01:three_prime_UTR |
| ACTATCATCTACGATCACTG+TGG | 0.741537 | 8:+69389950 | MsG0880046124.01.T01:CDS |
| ATACGGAGTGGATCAGACAA+CGG | 0.764813 | 8:+69390519 | MsG0880046124.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTGAACTTATTCATA+AGG | + | Chr8:69389630-69389649 | MsG0880046124.01.T01:intron | 15.0% |
| !! | AATTTATTCTTCTATTTGTT+GGG | + | Chr8:69388575-69388594 | MsG0880046124.01.T01:intron | 15.0% |
| !! | ACATAATAACATTACATAAA+TGG | - | Chr8:69389470-69389489 | None:intergenic | 15.0% |
| !! | CAATTTATGTTTAAATACTA+CGG | + | Chr8:69389373-69389392 | MsG0880046124.01.T01:intron | 15.0% |
| !!! | CTTTATTTTATTCAATCTTA+TGG | + | Chr8:69389339-69389358 | MsG0880046124.01.T01:intron | 15.0% |
| !! | AGAACTTTATGATAAATTCT+AGG | + | Chr8:69389868-69389887 | MsG0880046124.01.T01:intron | 20.0% |
| !! | AGCTGATATTTGAATTTAAT+TGG | + | Chr8:69387814-69387833 | MsG0880046124.01.T01:intron | 20.0% |
| !! | AGTTCATAATGTTTAATGAT+TGG | - | Chr8:69390844-69390863 | None:intergenic | 20.0% |
| !! | CAATTTATTCTTCTATTTGT+TGG | + | Chr8:69388574-69388593 | MsG0880046124.01.T01:intron | 20.0% |
| !! | GAATATGTAACATATAATTG+AGG | + | Chr8:69390257-69390276 | MsG0880046124.01.T01:three_prime_UTR | 20.0% |
| !! | TTATATGTTACATATTCTAC+CGG | - | Chr8:69390254-69390273 | None:intergenic | 20.0% |
| !! | TTCAATAAAATACAAGATGA+AGG | - | Chr8:69390427-69390446 | None:intergenic | 20.0% |
| !! | TTCTTCTAACAAATTTGTAA+AGG | + | Chr8:69389091-69389110 | MsG0880046124.01.T01:intron | 20.0% |
| !! | TTGGTTATATTAATTGTCTT+AGG | + | Chr8:69388473-69388492 | MsG0880046124.01.T01:intron | 20.0% |
| !! | TTGTATTAATGTATATTCAC+AGG | - | Chr8:69389830-69389849 | None:intergenic | 20.0% |
| !!! | AGTTTATCATCTTTAATTTC+AGG | + | Chr8:69387885-69387904 | MsG0880046124.01.T01:intron | 20.0% |
| !!! | GTTTATCATCTTTAATTTCA+GGG | + | Chr8:69387886-69387905 | MsG0880046124.01.T01:intron | 20.0% |
| !!! | TAACTTGTAATTACGTTAAA+CGG | - | Chr8:69388435-69388454 | None:intergenic | 20.0% |
| !!! | TTTTATTTGCATCAAAACTT+AGG | - | Chr8:69389608-69389627 | None:intergenic | 20.0% |
| ! | AAATCAGCATGTATATTTGA+AGG | + | Chr8:69390457-69390476 | MsG0880046124.01.T01:three_prime_UTR | 25.0% |
| ! | ACAATGTTTGTAAAGCAAAA+AGG | + | Chr8:69388614-69388633 | MsG0880046124.01.T01:intron | 25.0% |
| ! | ACTAAAATGTTAAGAGAATG+TGG | + | Chr8:69387848-69387867 | MsG0880046124.01.T01:intron | 25.0% |
| ! | ACTGTGTTGGAAAATAATTT+AGG | + | Chr8:69390189-69390208 | MsG0880046124.01.T01:exon | 25.0% |
| ! | AGTTGATCCATTAATACAAT+GGG | - | Chr8:69388003-69388022 | None:intergenic | 25.0% |
| ! | ATATCAATAAAGAGTTGCTA+TGG | + | Chr8:69390325-69390344 | MsG0880046124.01.T01:three_prime_UTR | 25.0% |
| ! | ATTGAAAACCTAACATTATG+AGG | + | Chr8:69388218-69388237 | MsG0880046124.01.T01:intron | 25.0% |
| ! | CAAATATCATTGTGTGATTT+AGG | - | Chr8:69388392-69388411 | None:intergenic | 25.0% |
| ! | GTCAAAGACATTATAGTATA+GGG | - | Chr8:69390156-69390175 | None:intergenic | 25.0% |
| ! | TGTCAAAGACATTATAGTAT+AGG | - | Chr8:69390157-69390176 | None:intergenic | 25.0% |
| ! | TTCTTTAGTAATAGAAATGC+AGG | - | Chr8:69388330-69388349 | None:intergenic | 25.0% |
| !! | AAATTATTTTCCAACACAGT+TGG | - | Chr8:69390189-69390208 | None:intergenic | 25.0% |
| !! | AAGTTGATCCATTAATACAA+TGG | - | Chr8:69388004-69388023 | None:intergenic | 25.0% |
| !!! | TACATGCTGATTTTCTTAAT+TGG | - | Chr8:69390450-69390469 | None:intergenic | 25.0% |
| AATACACTACTATTGATGTC+CGG | + | Chr8:69390232-69390251 | MsG0880046124.01.T01:three_prime_UTR | 30.0% | |
| AATGTATAAAGTGTATCCTG+CGG | + | Chr8:69388499-69388518 | MsG0880046124.01.T01:intron | 30.0% | |
| ACAAGTTCCCATTGTATTAA+TGG | + | Chr8:69387993-69388012 | MsG0880046124.01.T01:CDS | 30.0% | |
| AGACTAAACTCCTTATTATC+AGG | - | Chr8:69387761-69387780 | None:intergenic | 30.0% | |
| ATATCTTTATTGCTCGTCTT+GGG | + | Chr8:69390069-69390088 | MsG0880046124.01.T01:CDS | 30.0% | |
| ATCTACAATCTTCTTGAACA+TGG | - | Chr8:69390051-69390070 | None:intergenic | 30.0% | |
| ATGGAATCTTCTTGTATTAG+TGG | - | Chr8:69390032-69390051 | None:intergenic | 30.0% | |
| ATTCCAAAACAATAACCCTT+TGG | + | Chr8:69390783-69390802 | MsG0880046124.01.T01:three_prime_UTR | 30.0% | |
| GACTAAACTCCTTATTATCA+GGG | - | Chr8:69387760-69387779 | None:intergenic | 30.0% | |
| GAGATTATCAACACAATTAG+TGG | + | Chr8:69390637-69390656 | MsG0880046124.01.T01:three_prime_UTR | 30.0% | |
| GATATGTGATGTTAACTTAC+TGG | + | Chr8:69388875-69388894 | MsG0880046124.01.T01:CDS | 30.0% | |
| TAAGTTAACATCACATATCC+TGG | - | Chr8:69388874-69388893 | None:intergenic | 30.0% | |
| TATTCATAAGGTTGCATGAT+AGG | + | Chr8:69389642-69389661 | MsG0880046124.01.T01:intron | 30.0% | |
| TCAATCAAAACAACGAAGTA+TGG | + | Chr8:69388965-69388984 | MsG0880046124.01.T01:intron | 30.0% | |
| TTCCAAAACAATAACCCTTT+GGG | + | Chr8:69390784-69390803 | MsG0880046124.01.T01:three_prime_UTR | 30.0% | |
| TTGAAATTGAAGGAGCAAAA+TGG | + | Chr8:69389979-69389998 | MsG0880046124.01.T01:CDS | 30.0% | |
| TTTACTAGTTGAAGAGTTGT+TGG | + | Chr8:69388787-69388806 | MsG0880046124.01.T01:intron | 30.0% | |
| TTTCACAAGGATAATACACA+TGG | - | Chr8:69388184-69388203 | None:intergenic | 30.0% | |
| ! | AAGTTGATTAGTGACTGATA+CGG | + | Chr8:69390502-69390521 | MsG0880046124.01.T01:three_prime_UTR | 30.0% |
| ! | AGTAATTTTGCCATCAAACT+TGG | - | Chr8:69390132-69390151 | None:intergenic | 30.0% |
| ! | AGTTATGATTAGTTGCATGT+TGG | + | Chr8:69388454-69388473 | MsG0880046124.01.T01:intron | 30.0% |
| ! | ATCTCTAGTTTAGCTTATGT+TGG | - | Chr8:69389430-69389449 | None:intergenic | 30.0% |
| ! | ATGTTAGGTTTTCAATATGC+TGG | - | Chr8:69388214-69388233 | None:intergenic | 30.0% |
| ! | ATTAGACTTGTTCCTCATTT+CGG | + | Chr8:69390361-69390380 | MsG0880046124.01.T01:three_prime_UTR | 30.0% |
| ! | GAATTTCTTGATGACATGAT+TGG | - | Chr8:69389765-69389784 | None:intergenic | 30.0% |
| ! | TAACATTATGAGGTTTTGCA+GGG | + | Chr8:69388228-69388247 | MsG0880046124.01.T01:intron | 30.0% |
| ! | TCTCTAGTTTAGCTTATGTT+GGG | - | Chr8:69389429-69389448 | None:intergenic | 30.0% |
| AATGATGATTCCAACTGTGT+TGG | + | Chr8:69390176-69390195 | MsG0880046124.01.T01:CDS | 35.0% | |
| ACAAGATCAGATTGCTCTAT+AGG | - | Chr8:69388279-69388298 | None:intergenic | 35.0% | |
| ACATCCATACAATATCCCAA+AGG | - | Chr8:69390802-69390821 | None:intergenic | 35.0% | |
| CAAGTAGTTTCCAAGTTTGA+TGG | + | Chr8:69390119-69390138 | MsG0880046124.01.T01:CDS | 35.0% | |
| CATCCATACAATATCCCAAA+GGG | - | Chr8:69390801-69390820 | None:intergenic | 35.0% | |
| CTGCAAAACCTCATAATGTT+AGG | - | Chr8:69388229-69388248 | None:intergenic | 35.0% | |
| CTTATGTTGGGTACAGTTTA+GGG | - | Chr8:69389417-69389436 | None:intergenic | 35.0% | |
| GATATCTTTATTGCTCGTCT+TGG | + | Chr8:69390068-69390087 | MsG0880046124.01.T01:CDS | 35.0% | |
| GGACATCAATAGTAGTGTAT+TGG | - | Chr8:69390233-69390252 | None:intergenic | 35.0% | |
| GGATTCTCATTGATCCAAAT+AGG | + | Chr8:69388078-69388097 | MsG0880046124.01.T01:CDS | 35.0% | |
| GTATGCTCGTTAAACGAAAT+AGG | + | Chr8:69389195-69389214 | MsG0880046124.01.T01:intron | 35.0% | |
| GTGGATGATCTTGAAATTGA+AGG | + | Chr8:69389969-69389988 | MsG0880046124.01.T01:CDS | 35.0% | |
| GTTAAGAGAATGTGGAACAT+GGG | + | Chr8:69387856-69387875 | MsG0880046124.01.T01:intron | 35.0% | |
| TAAATTACCTTGACAGCAAC+TGG | - | Chr8:69388303-69388322 | None:intergenic | 35.0% | |
| TAATAAGGAGTTTAGTCTCG+AGG | + | Chr8:69387763-69387782 | MsG0880046124.01.T01:CDS | 35.0% | |
| TAGACAAAGCATAGATGCAA+AGG | - | Chr8:69388123-69388142 | None:intergenic | 35.0% | |
| TAGTGAAGTCTATAGGGATT+GGG | + | Chr8:69390751-69390770 | MsG0880046124.01.T01:three_prime_UTR | 35.0% | |
| TCTTTCTCACTGGAAAAGAA+TGG | + | Chr8:69388145-69388164 | MsG0880046124.01.T01:CDS | 35.0% | |
| TGTTAAGAGAATGTGGAACA+TGG | + | Chr8:69387855-69387874 | MsG0880046124.01.T01:intron | 35.0% | |
| TTAACTTACTGGATTCCTGA+AGG | + | Chr8:69388886-69388905 | MsG0880046124.01.T01:CDS | 35.0% | |
| TTATGTTGGGTACAGTTTAG+GGG | - | Chr8:69389416-69389435 | None:intergenic | 35.0% | |
| TTGTTGAAGTCATAGCATTC+AGG | + | Chr8:69389734-69389753 | MsG0880046124.01.T01:CDS | 35.0% | |
| TTTGTCTATCTCTTTCTCAC+TGG | + | Chr8:69388135-69388154 | MsG0880046124.01.T01:CDS | 35.0% | |
| ! | ATCCCAAAGGGTTATTGTTT+TGG | - | Chr8:69390789-69390808 | None:intergenic | 35.0% |
| ! | CTAACATTATGAGGTTTTGC+AGG | + | Chr8:69388227-69388246 | MsG0880046124.01.T01:intron | 35.0% |
| ! | TGAGGTAACTAGACTCATTT+TGG | + | Chr8:69388815-69388834 | MsG0880046124.01.T01:intron | 35.0% |
| !! | AGGGATATGATTTGTTCCAT+TGG | + | Chr8:69390700-69390719 | MsG0880046124.01.T01:three_prime_UTR | 35.0% |
| !! | ATCCAGTTGGTATTTTCCAA+AGG | - | Chr8:69389160-69389179 | None:intergenic | 35.0% |
| !! | CAAATTTGTAAAGGTGCTTG+TGG | + | Chr8:69389100-69389119 | MsG0880046124.01.T01:intron | 35.0% |
| !! | GATATGATTTGTTCCATTGG+CGG | + | Chr8:69390703-69390722 | MsG0880046124.01.T01:three_prime_UTR | 35.0% |
| !! | TAACCCTTTGGGATATTGTA+TGG | + | Chr8:69390795-69390814 | MsG0880046124.01.T01:three_prime_UTR | 35.0% |
| !!! | ATTGAACTTTTTTGCCAACG+CGG | - | Chr8:69388643-69388662 | None:intergenic | 35.0% |
| !!! | TATTGTTTTGGAATAACCCC+AGG | - | Chr8:69390777-69390796 | None:intergenic | 35.0% |
| AAAACTTGATACATGACCGC+AGG | - | Chr8:69388518-69388537 | None:intergenic | 40.0% | |
| AAGAGTTGCTATGGAACATG+AGG | + | Chr8:69390334-69390353 | MsG0880046124.01.T01:three_prime_UTR | 40.0% | |
| ACAGTGATCGTAGATGATAG+TGG | - | Chr8:69389951-69389970 | None:intergenic | 40.0% | |
| ACCAACTGGATTCATTCATG+AGG | + | Chr8:69389169-69389188 | MsG0880046124.01.T01:CDS | 40.0% | |
| ACCTCATGAATGAATCCAGT+TGG | - | Chr8:69389173-69389192 | None:intergenic | 40.0% | |
| ACTATCATCTACGATCACTG+TGG | + | Chr8:69389950-69389969 | MsG0880046124.01.T01:CDS | 40.0% | |
| ACTTGATGTGATGCATTTGC+TGG | - | Chr8:69388925-69388944 | None:intergenic | 40.0% | |
| ACTTGTTCCTCATTTCGGTT+TGG | + | Chr8:69390366-69390385 | MsG0880046124.01.T01:three_prime_UTR | 40.0% | |
| AGAAGTGAAGGAAGAAACTG+GGG | + | Chr8:69389556-69389575 | MsG0880046124.01.T01:CDS | 40.0% | |
| AGAGAAGTGAAGGAAGAAAC+TGG | + | Chr8:69389554-69389573 | MsG0880046124.01.T01:CDS | 40.0% | |
| AGAGTTGCTATGGAACATGA+GGG | + | Chr8:69390335-69390354 | MsG0880046124.01.T01:three_prime_UTR | 40.0% | |
| ATCTGTTTCCCTTTGAACCA+GGG | - | Chr8:69389239-69389258 | None:intergenic | 40.0% | |
| CCCTATAGACTTCACTACAA+GGG | - | Chr8:69390748-69390767 | None:intergenic | 40.0% | |
| CCCTTGTAGTGAAGTCTATA+GGG | + | Chr8:69390745-69390764 | MsG0880046124.01.T01:three_prime_UTR | 40.0% | |
| CTACTTTCCAAACCGAAATG+AGG | - | Chr8:69390376-69390395 | None:intergenic | 40.0% | |
| GAAGAGTTGTTGGATCTATG+AGG | + | Chr8:69388797-69388816 | MsG0880046124.01.T01:intron | 40.0% | |
| GAGAAGTGAAGGAAGAAACT+GGG | + | Chr8:69389555-69389574 | MsG0880046124.01.T01:CDS | 40.0% | |
| GCAAATGCATCACATCAAGT+CGG | + | Chr8:69388925-69388944 | MsG0880046124.01.T01:CDS | 40.0% | |
| GCTTATGTTGGGTACAGTTT+AGG | - | Chr8:69389418-69389437 | None:intergenic | 40.0% | |
| GGATTGTGTGGTAACCTATT+TGG | - | Chr8:69388095-69388114 | None:intergenic | 40.0% | |
| GTAGTGAAGTCTATAGGGAT+TGG | + | Chr8:69390750-69390769 | MsG0880046124.01.T01:three_prime_UTR | 40.0% | |
| TCCCTATAGACTTCACTACA+AGG | - | Chr8:69390749-69390768 | None:intergenic | 40.0% | |
| TCTCAGTGATGCAATGAGAA+AGG | - | Chr8:69390619-69390638 | None:intergenic | 40.0% | |
| TGCCAAATAAGTGTCATCTG+AGG | - | Chr8:69387934-69387953 | None:intergenic | 40.0% | |
| TGCCTCAGATGACACTTATT+TGG | + | Chr8:69387929-69387948 | MsG0880046124.01.T01:CDS | 40.0% | |
| TTAGGGGAAATCGTGTAAAC+TGG | - | Chr8:69389400-69389419 | None:intergenic | 40.0% | |
| TTCTAGGCATGTACACAATG+TGG | + | Chr8:69389884-69389903 | MsG0880046124.01.T01:intron | 40.0% | |
| ! | ACTATCTGATGACGATCATG+CGG | + | Chr8:69390663-69390682 | MsG0880046124.01.T01:three_prime_UTR | 40.0% |
| ! | AGCATAGATGCAAAGGCATA+TGG | - | Chr8:69388116-69388135 | None:intergenic | 40.0% |
| ! | CATTGTTCTCCTGCAACTTT+TGG | + | Chr8:69389134-69389153 | MsG0880046124.01.T01:CDS | 40.0% |
| !! | ACTAGACTCATTTTGGTCTC+AGG | + | Chr8:69388822-69388841 | MsG0880046124.01.T01:intron | 40.0% |
| !! | CCTTTGATGATGAGTATGGA+GGG | + | Chr8:69388057-69388076 | MsG0880046124.01.T01:CDS | 40.0% |
| !! | GATGCCTTTGATGATGAGTA+TGG | + | Chr8:69388053-69388072 | MsG0880046124.01.T01:CDS | 40.0% |
| AGGAGCTGTAAGAGAAGTGA+AGG | + | Chr8:69389544-69389563 | MsG0880046124.01.T01:CDS | 45.0% | |
| ATACGGAGTGGATCAGACAA+CGG | + | Chr8:69390519-69390538 | MsG0880046124.01.T01:three_prime_UTR | 45.0% | |
| ATGCGGTGATTGACTACTAG+AGG | + | Chr8:69390680-69390699 | MsG0880046124.01.T01:three_prime_UTR | 45.0% | |
| CAGGCAGAGGAGATTTATAC+AGG | + | Chr8:69389524-69389543 | MsG0880046124.01.T01:intron | 45.0% | |
| CATCTGTTTCCCTTTGAACC+AGG | - | Chr8:69389240-69389259 | None:intergenic | 45.0% | |
| CCCTCCATACTCATCATCAA+AGG | - | Chr8:69388060-69388079 | None:intergenic | 45.0% | |
| CGTCTTGGGAAACGTTATTG+TGG | + | Chr8:69390083-69390102 | MsG0880046124.01.T01:CDS | 45.0% | |
| GATTAGTGACTGATACGGAG+TGG | + | Chr8:69390507-69390526 | MsG0880046124.01.T01:three_prime_UTR | 45.0% | |
| GCATCACATCAAGTCGGAAT+CGG | + | Chr8:69388931-69388950 | MsG0880046124.01.T01:CDS | 45.0% | |
| GCCCTTGTAGTGAAGTCTAT+AGG | + | Chr8:69390744-69390763 | MsG0880046124.01.T01:three_prime_UTR | 45.0% | |
| TCGCTTGTGTGAATTGTCTC+AGG | + | Chr8:69389505-69389524 | MsG0880046124.01.T01:intron | 45.0% | |
| TCTTGTTCCAGTTGCTGTCA+AGG | + | Chr8:69388293-69388312 | MsG0880046124.01.T01:CDS | 45.0% | |
| TGCAGGGAAAGAAGGGAATT+TGG | + | Chr8:69388244-69388263 | MsG0880046124.01.T01:intron | 45.0% | |
| TGCGGTGATTGACTACTAGA+GGG | + | Chr8:69390681-69390700 | MsG0880046124.01.T01:three_prime_UTR | 45.0% | |
| TGCTCTACAAACTCAACCAG+TGG | - | Chr8:69390008-69390027 | None:intergenic | 45.0% | |
| TGCTGGATGATGCTTTCACA+AGG | - | Chr8:69388197-69388216 | None:intergenic | 45.0% | |
| TGTGACGTCGAGTAGAATGA+TGG | + | Chr8:69390570-69390589 | MsG0880046124.01.T01:three_prime_UTR | 45.0% | |
| TTCCAAAGGCCAAAAGTTGC+AGG | - | Chr8:69389146-69389165 | None:intergenic | 45.0% | |
| ! | GAGGTTTTGCAGGGAAAGAA+GGG | + | Chr8:69388237-69388256 | MsG0880046124.01.T01:intron | 45.0% |
| ! | GCAAAGGCATATGGATTGTG+TGG | - | Chr8:69388107-69388126 | None:intergenic | 45.0% |
| ! | GGCCTTTGGAAAATACCAAC+TGG | + | Chr8:69389155-69389174 | MsG0880046124.01.T01:CDS | 45.0% |
| ! | TGAGGTTTTGCAGGGAAAGA+AGG | + | Chr8:69388236-69388255 | MsG0880046124.01.T01:intron | 45.0% |
| !! | GACTCATTTTGGTCTCAGGA+AGG | + | Chr8:69388826-69388845 | MsG0880046124.01.T01:intron | 45.0% |
| !! | GCCTTTGATGATGAGTATGG+AGG | + | Chr8:69388056-69388075 | MsG0880046124.01.T01:CDS | 45.0% |
| AACAGCAGCCCTGGTTCAAA+GGG | + | Chr8:69389228-69389247 | MsG0880046124.01.T01:intron | 50.0% | |
| AAGTCTATAGGGATTGGGCC+TGG | + | Chr8:69390756-69390775 | MsG0880046124.01.T01:three_prime_UTR | 50.0% | |
| AGGAGCAAAATGGATGCCAC+TGG | + | Chr8:69389989-69390008 | MsG0880046124.01.T01:CDS | 50.0% | |
| AGTCTATAGGGATTGGGCCT+GGG | + | Chr8:69390757-69390776 | MsG0880046124.01.T01:three_prime_UTR | 50.0% | |
| AGTTGTTAGAACAGCAGCCC+TGG | + | Chr8:69389219-69389238 | MsG0880046124.01.T01:intron | 50.0% | |
| GTGTGAATTGTCTCAGGCAG+AGG | + | Chr8:69389511-69389530 | MsG0880046124.01.T01:intron | 50.0% | |
| TCACATCAAGTCGGAATCGG+AGG | + | Chr8:69388934-69388953 | MsG0880046124.01.T01:CDS | 50.0% | |
| ! | AGACTTCACTACAAGGGCAC+AGG | - | Chr8:69390742-69390761 | None:intergenic | 50.0% |
| ! | GCATTTGCTGGAAGCATGCA+AGG | - | Chr8:69388913-69388932 | None:intergenic | 50.0% |
| ! | TCACTACAAGGGCACAGGTT+CGG | - | Chr8:69390737-69390756 | None:intergenic | 50.0% |
| !! | CTCCTGCAACTTTTGGCCTT+TGG | + | Chr8:69389141-69389160 | MsG0880046124.01.T01:CDS | 50.0% |
| !! | TCACATATCCTGGCTCTGCA+TGG | - | Chr8:69388864-69388883 | None:intergenic | 50.0% |
| !!! | GAACTTTTTTGCCAACGCGG+TGG | - | Chr8:69388640-69388659 | None:intergenic | 50.0% |
| AAGCAAAAAGGCCACCGCGT+TGG | + | Chr8:69388626-69388645 | MsG0880046124.01.T01:intron | 55.0% | |
| CAATACCACCATGCAGAGCC+AGG | + | Chr8:69388853-69388872 | MsG0880046124.01.T01:CDS | 55.0% | |
| GAACAGCAGCCCTGGTTCAA+AGG | + | Chr8:69389227-69389246 | MsG0880046124.01.T01:intron | 55.0% | |
| GATCAGACAACGGTCGGAGT+TGG | + | Chr8:69390529-69390548 | MsG0880046124.01.T01:three_prime_UTR | 55.0% | |
| GGAGTGGATCAGACAACGGT+CGG | + | Chr8:69390523-69390542 | MsG0880046124.01.T01:three_prime_UTR | 55.0% | |
| GTCTATAGGGATTGGGCCTG+GGG | + | Chr8:69390758-69390777 | MsG0880046124.01.T01:three_prime_UTR | 55.0% | |
| ! | GGAAGCATGCAAGGTCCTTC+AGG | - | Chr8:69388904-69388923 | None:intergenic | 55.0% |
| !! | CATATCCTGGCTCTGCATGG+TGG | - | Chr8:69388861-69388880 | None:intergenic | 55.0% |
| TTCGGACGCTGCGCCGCCAA+TGG | - | Chr8:69390719-69390738 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 69387753 | 69390863 | 69387753 | ID=MsG0880046124.01;Name=MsG0880046124.01 |
| Chr8 | mRNA | 69387753 | 69390863 | 69387753 | ID=MsG0880046124.01.T01;Parent=MsG0880046124.01;Name=MsG0880046124.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0.85|0.75|1|0.85|0.75|8|658|331 |
| Chr8 | exon | 69387753 | 69387784 | 69387753 | ID=MsG0880046124.01.T01:exon:12960;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69387887 | 69388166 | 69387887 | ID=MsG0880046124.01.T01:exon:12961;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69388249 | 69388314 | 69388249 | ID=MsG0880046124.01.T01:exon:12962;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69388844 | 69388981 | 69388844 | ID=MsG0880046124.01.T01:exon:12963;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69389113 | 69389190 | 69389113 | ID=MsG0880046124.01.T01:exon:12964;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69389527 | 69389577 | 69389527 | ID=MsG0880046124.01.T01:exon:12965;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69389721 | 69389755 | 69389721 | ID=MsG0880046124.01.T01:exon:12966;Parent=MsG0880046124.01.T01 |
| Chr8 | exon | 69389890 | 69390863 | 69389890 | ID=MsG0880046124.01.T01:exon:12967;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69387753 | 69387784 | 69387753 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69387887 | 69388166 | 69387887 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69388249 | 69388314 | 69388249 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69388844 | 69388981 | 69388844 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69389113 | 69389190 | 69389113 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69389527 | 69389577 | 69389527 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69389721 | 69389755 | 69389721 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | CDS | 69389890 | 69390205 | 69389890 | ID=MsG0880046124.01.T01:cds;Parent=MsG0880046124.01.T01 |
| Chr8 | three_prime_UTR | 69390206 | 69390863 | 69390206 | ID=MsG0880046124.01.T01:three_prime_utr;Parent=MsG0880046124.01.T01 |
| Gene Sequence |
| Protein sequence |
