AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002490.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002490.01.T02 MTR_4g032360 99.351 154 1 0 5 158 202 355 3.40e-107 310
MsG0180002490.01.T02 MTR_4g072780 98.701 154 2 0 5 158 202 355 9.39e-107 309
MsG0180002490.01.T02 MTR_4g062550 98.701 154 2 0 5 158 202 355 1.28e-106 308
MsG0180002490.01.T02 MTR_4g062570 98.701 154 2 0 5 158 202 355 2.11e-106 308
MsG0180002490.01.T02 MTR_5g022720 81.818 154 5 1 5 158 142 272 4.36e-82 243
MsG0180002490.01.T02 MTR_8g088880 46.207 145 78 0 5 149 204 348 3.17e-41 141
MsG0180002490.01.T02 MTR_8g088860 44.805 154 84 1 5 157 204 357 2.37e-40 139
MsG0180002490.01.T02 MTR_8g088890 37.302 126 79 0 5 130 176 301 5.69e-29 108
MsG0180002490.01.T02 MTR_7g096970 28.667 150 106 1 7 156 375 523 1.86e-14 70.1
MsG0180002490.01.T02 MTR_7g097000 26.797 153 109 2 7 159 374 523 1.67e-12 64.3
MsG0180002490.01.T02 MTR_2g093550 31.206 141 89 5 4 139 73 210 6.51e-12 61.6
MsG0180002490.01.T02 MTR_2g093630 30.986 142 90 5 4 140 62 200 8.49e-12 61.2
MsG0180002490.01.T02 MTR_2g093350 27.778 162 106 7 4 159 299 455 9.19e-12 62.4
MsG0180002490.01.T02 MTR_2g093620 31.884 138 86 5 4 136 297 431 1.66e-11 61.6
MsG0180002490.01.T02 MTR_2g093390 27.778 162 106 7 4 159 296 452 1.91e-11 61.2
MsG0180002490.01.T02 MTR_2g093590 28.571 161 104 7 4 158 296 451 2.12e-11 61.2
MsG0180002490.01.T02 MTR_1g072600 28.571 133 90 3 7 138 432 560 2.87e-11 60.8
MsG0180002490.01.T02 MTR_4g060780 31.858 113 74 3 26 136 307 418 5.53e-11 60.1
MsG0180002490.01.T02 MTR_7g096990 26.144 153 110 2 7 159 368 517 5.56e-11 60.1
MsG0180002490.01.T02 MTR_1g072610 28.571 133 90 3 7 138 401 529 6.07e-11 60.1
MsG0180002490.01.T01 MTR_4g062570 87.984 258 11 1 95 332 11 268 2.17e-159 457
MsG0180002490.01.T01 MTR_4g062570 91.667 192 9 1 329 513 10 201 4.87e-117 349
MsG0180002490.01.T01 MTR_4g062550 87.984 258 11 1 95 332 11 268 2.91e-159 457
MsG0180002490.01.T01 MTR_4g062550 91.146 192 10 1 329 513 10 201 2.67e-116 347
MsG0180002490.01.T01 MTR_4g072780 87.984 258 11 1 95 332 11 268 3.74e-159 456
MsG0180002490.01.T01 MTR_4g072780 90.625 192 11 1 329 513 10 201 1.56e-115 345
MsG0180002490.01.T01 MTR_4g032360 87.597 258 12 1 95 332 11 268 2.69e-158 454
MsG0180002490.01.T01 MTR_4g032360 90.104 192 12 1 329 513 10 201 1.21e-114 343
MsG0180002490.01.T01 MTR_5g022720 52.490 261 47 5 73 332 1 185 1.95e-69 224
MsG0180002490.01.T01 MTR_5g022720 94.203 69 4 0 445 513 73 141 5.59e-38 140
MsG0180002490.01.T01 MTR_8g088860 33.725 255 147 1 100 332 16 270 8.24e-51 177
MsG0180002490.01.T01 MTR_8g088860 39.655 174 96 3 329 493 10 183 8.45e-35 134
MsG0180002490.01.T01 MTR_8g088890 33.884 242 138 1 113 332 1 242 8.10e-49 171
MsG0180002490.01.T01 MTR_8g088890 40.361 166 90 3 348 504 1 166 1.26e-32 127
MsG0180002490.01.T01 MTR_8g088880 31.439 264 159 1 95 336 11 274 9.59e-44 159
MsG0180002490.01.T01 MTR_8g088880 34.595 185 112 3 329 504 10 194 7.16e-28 114
MsG0180002490.01.T01 MTR_7g033690 80.952 42 8 0 115 156 1 42 7.50e-15 70.5
MsG0180002490.01.T01 MTR_7g033690 83.333 36 6 0 350 385 1 36 2.20e-12 63.5
MsG0180002490.01.T01 MTR_0093s0070 58.209 67 25 2 31 95 127 192 9.12e-15 73.6
MsG0180002490.01.T01 MTR_8g098925 56.716 67 26 2 29 93 67 132 1.85e-14 71.6
MsG0180002490.01.T01 MTR_1g017840 49.254 67 33 1 27 92 78 144 3.36e-13 67.8
MsG0180002490.01.T01 MTR_7g013520 51.471 68 32 1 25 91 68 135 4.44e-12 65.1
MsG0180002490.01.T01 MTR_6g089560 48.485 66 33 1 27 91 116 181 1.25e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002490.01.T02 AT2G28680 84.314 153 24 0 5 157 202 354 9.85e-90 266
MsG0180002490.01.T02 AT1G07750 83.007 153 26 0 5 157 202 354 2.14e-87 259
MsG0180002490.01.T02 AT4G28520 31.061 132 90 1 8 139 291 421 7.91e-17 77.0
MsG0180002490.01.T02 AT4G28520 31.061 132 90 1 8 139 362 492 1.82e-16 75.9
MsG0180002490.01.T02 AT1G03890 28.477 151 107 1 7 157 298 447 3.53e-15 72.0
MsG0180002490.01.T02 AT1G03880 29.630 135 94 1 8 142 298 431 6.49e-13 65.5
MsG0180002490.01.T02 AT5G44120 28.788 132 93 1 8 139 124 254 1.14e-12 64.3
MsG0180002490.01.T02 AT5G44120 28.788 132 93 1 8 139 311 441 1.55e-12 64.7
MsG0180002490.01.T02 AT5G44120 28.788 132 93 1 8 139 207 337 1.61e-12 64.3
MsG0180002490.01.T02 AT2G28490 28.387 155 103 5 8 158 345 495 3.65e-11 60.5
MsG0180002490.01.T01 AT1G07750 73.384 263 50 1 94 336 10 272 1.37e-134 394
MsG0180002490.01.T01 AT1G07750 74.346 191 42 1 330 513 11 201 7.89e-94 290
MsG0180002490.01.T01 AT2G28680 71.483 263 55 1 94 336 10 272 2.69e-131 385
MsG0180002490.01.T01 AT2G28680 71.204 191 48 1 330 513 11 201 5.70e-89 277

Find 190 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTACTTTATGAAGTTTC+TGG 0.140518 1:-39036610 MsG0180002490.01.T02:three_prime_UTR
AATGCAAAAGTTGTATTTAA+TGG 0.153251 1:+39036461 None:intergenic
TGGTGATTCACGATGGTCTT+AGG 0.184148 1:-39044795 None:intergenic
GGAGAAGGTTGTTGCAATTA+AGG 0.197430 1:-39038043 MsG0180002490.01.T01:CDS
CTCTTGTGATTCTGCTTTGC+AGG 0.207745 1:-39037577 MsG0180002490.01.T02:CDS
CTCTTGTGATTCTGCTTTGC+AGG 0.207745 1:-39041564 MsG0180002490.01.T01:CDS
CCTTTCCTGTGTTCATCTTT+AGG 0.208521 1:+39037760 None:intergenic
CCTTTCCTGTGTTCATCTTT+AGG 0.208521 1:+39041746 None:intergenic
TGCAGGTTACTTACATTGTT+AGG 0.243182 1:-39037560 MsG0180002490.01.T02:CDS
TGCAGGTTACTTACATTGTT+AGG 0.243182 1:-39041547 MsG0180002490.01.T01:CDS
GGTCCTAATGGAATCTTTAC+TGG 0.258702 1:-39037904 MsG0180002490.01.T01:CDS
GGTCCTAATGGAATCTTTAC+TGG 0.258702 1:-39041890 MsG0180002490.01.T01:CDS
CGGAAGAGCTTCTCAACTTC+TGG 0.259062 1:+39036754 None:intergenic
ATGCAAAAGTTGTATTTAAT+GGG 0.315077 1:+39036462 None:intergenic
ACAACCTTCTCCTCTGATTC+AGG 0.324463 1:+39038054 None:intergenic
TTTCGTGGTGGTGTTGTTGA+TGG 0.335235 1:-39044766 MsG0180002490.01.T01:CDS
CTTCCTTTGGTTGGTGAGGT+TGG 0.336501 1:-39037654 MsG0180002490.01.T02:CDS
CTTCCTTTGGTTGGTGAGGT+TGG 0.336501 1:-39041641 MsG0180002490.01.T01:CDS
AGCGGACGTGTTCAGGTTGT+TGG 0.349268 1:-39041521 MsG0180002490.01.T01:CDS
TTGGTTGGTGAGGTTGGTTT+AGG 0.350208 1:-39037648 MsG0180002490.01.T02:CDS
TTGGTTGGTGAGGTTGGTTT+AGG 0.350208 1:-39041635 MsG0180002490.01.T01:CDS
AGGAGTTTGATTGCCTCAAT+TGG 0.367076 1:-39036567 MsG0180002490.01.T02:three_prime_UTR
GGAAGATCCATGTGCTCTCC+TGG 0.372229 1:-39037603 MsG0180002490.01.T02:CDS
GGAAGATCCATGTGCTCTCC+TGG 0.372229 1:-39041590 MsG0180002490.01.T01:CDS
CCTGCAGAACTGTAGGTGAT+AGG 0.376001 1:+39036794 None:intergenic
GAGGTATTCTGATTCTTCTA+AGG 0.377249 1:-39038207 MsG0180002490.01.T01:CDS
GAGGTATTCTGATTCTTCTA+AGG 0.377249 1:-39042213 MsG0180002490.01.T01:CDS
GTTCAAGTTGTTGGTGTTGA+TGG 0.381997 1:-39037525 MsG0180002490.01.T02:CDS
TTCTATATTATATTCTACTT+TGG 0.403377 1:+39036694 None:intergenic
CTTTGGAGGAGGGAAGAAAA+TGG 0.404487 1:+39036711 None:intergenic
GTTCAGGTTGTTGGTGTTGA+TGG 0.404499 1:-39041512 MsG0180002490.01.T01:intron
GCTGATCTTGTGAGGATTGA+TGG 0.405011 1:-39037624 MsG0180002490.01.T02:CDS
GCTGATCTTGTGAGGATTGA+TGG 0.405011 1:-39041611 MsG0180002490.01.T01:CDS
GCAGGTTACTTACATTGTTA+GGG 0.405546 1:-39037559 MsG0180002490.01.T02:CDS
GCAGGTTACTTACATTGTTA+GGG 0.405546 1:-39041546 MsG0180002490.01.T01:CDS
AAGGTTGCTTATGTTCTTCA+AGG 0.410175 1:-39038188 MsG0180002490.01.T01:intron
AAGGTTGCTTATGTTCTTCA+AGG 0.410175 1:-39042194 MsG0180002490.01.T01:intron
AGCGGACGTGTTCAAGTTGT+TGG 0.410822 1:-39037534 MsG0180002490.01.T02:CDS
GATGCTTTAGCACTCCCCTT+TGG 0.411635 1:-39038015 MsG0180002490.01.T01:CDS
ACCAACCAAAGGAAGGTTCT+TGG 0.412307 1:+39037662 None:intergenic
ACCAACCAAAGGAAGGTTCT+TGG 0.412307 1:+39041649 None:intergenic
GAACACCAAGAACCTTCCTT+TGG 0.413394 1:-39037667 MsG0180002490.01.T02:CDS
AGCACTCCCCTTTGGTGTTG+TGG 0.417090 1:-39038007 MsG0180002490.01.T01:CDS
GATGCTTTAGCACTCCCCTT+TGG 0.424945 1:-39042022 MsG0180002490.01.T01:CDS
AATCCAGTAAAGATTCCATT+AGG 0.431957 1:+39037901 None:intergenic
AATCCAGTAAAGATTCCATT+AGG 0.431957 1:+39041887 None:intergenic
GATGATGAAGGTACCTTTGT+TGG 0.432952 1:-39043290 MsG0180002490.01.T01:CDS
AGGCATGGCTTTAAACTGTC+TGG 0.435022 1:-39037740 MsG0180002490.01.T01:CDS
AGGCATGGCTTTAAACTGTC+TGG 0.435022 1:-39041726 MsG0180002490.01.T01:CDS
GAACACCAAGAACCTTCCTT+TGG 0.439609 1:-39041654 MsG0180002490.01.T01:CDS
TATATTATATTCTACTTTGG+AGG 0.441393 1:+39036697 None:intergenic
CTGAGTTTGTGGGAAGAGCT+TGG 0.442265 1:-39037873 MsG0180002490.01.T01:CDS
CTGAGTTTGTGGGAAGAGCT+TGG 0.442265 1:-39041859 MsG0180002490.01.T01:CDS
TGAGTTTGTGGGAAGAGCTT+GGG 0.443495 1:-39037872 MsG0180002490.01.T01:CDS
TGAGTTTGTGGGAAGAGCTT+GGG 0.443495 1:-39041858 MsG0180002490.01.T01:CDS
TGTTGCCGTGAGAGAAGCCT+TGG 0.447370 1:-39043236 MsG0180002490.01.T01:CDS
TGACGACGTCGATGTCATCT+TGG 0.453889 1:-39043174 MsG0180002490.01.T01:CDS
ACACATGGCTGGAAGTTCTT+CGG 0.454286 1:-39036827 MsG0180002490.01.T02:CDS
ACCAAGAACCTTCCTTTGGT+TGG 0.462283 1:-39037663 MsG0180002490.01.T02:CDS
ACCAAGAACCTTCCTTTGGT+TGG 0.462283 1:-39041650 MsG0180002490.01.T01:CDS
CACCATGTCACAACACCAAA+GGG 0.465835 1:+39042007 None:intergenic
GGTGATTCACGATGGTCTTA+GGG 0.466509 1:-39044794 None:intergenic
GTTGGAAAGCAGTCCGCTAA+AGG 0.467995 1:-39037820 MsG0180002490.01.T01:CDS
GTTGGAAAGCAGTCCGCTAA+AGG 0.467995 1:-39041806 MsG0180002490.01.T01:CDS
CTGTGTTCATCTTTAGGCTG+AGG 0.468280 1:+39037766 None:intergenic
TGTGGGAAGAGCTTGGGACT+TGG 0.468488 1:-39037866 MsG0180002490.01.T01:CDS
TGTGGGAAGAGCTTGGGACT+TGG 0.468488 1:-39041852 MsG0180002490.01.T01:CDS
AAACTGTCTGGAGGCACCAT+TGG 0.469468 1:-39037728 MsG0180002490.01.T01:CDS
AAACTGTCTGGAGGCACCAT+TGG 0.469468 1:-39041714 MsG0180002490.01.T01:CDS
GAAACAGGAAGTGGAGTTGC+TGG 0.472275 1:-39038087 MsG0180002490.01.T01:intron
TCCCCTTTGGTGTTGTGACA+TGG 0.472969 1:-39042009 MsG0180002490.01.T01:CDS
GAGTTGGTTGTTCTGTTCCT+CGG 0.474191 1:-39041965 MsG0180002490.01.T01:CDS
TTGGAGACAACTTTGAAGGC+TGG 0.481044 1:-39037492 MsG0180002490.01.T02:CDS
ATTATATTCTACTTTGGAGG+AGG 0.482847 1:+39036700 None:intergenic
GAACCTTCCTTTGGTTGGTG+AGG 0.484774 1:-39037658 MsG0180002490.01.T02:CDS
GAACCTTCCTTTGGTTGGTG+AGG 0.484774 1:-39041645 MsG0180002490.01.T01:CDS
AGTCTTGGAGACAACTTTGA+AGG 0.493036 1:-39037496 MsG0180002490.01.T02:CDS
AAAGGGATTGTGAAGCTTGA+CGG 0.493208 1:-39037802 MsG0180002490.01.T01:CDS
AAAGGGATTGTGAAGCTTGA+CGG 0.493208 1:-39041788 MsG0180002490.01.T01:CDS
TCGAAGATTGCTGACAATGA+TGG 0.493938 1:-39037435 MsG0180002490.01.T02:CDS
CCTATCACCTACAGTTCTGC+AGG 0.500700 1:-39036794 MsG0180002490.01.T02:CDS
TCGGTGTCCACAACACCAAA+GGG 0.503561 1:+39038000 None:intergenic
TTGGAAAGCAGTCCGCTAAA+GGG 0.505396 1:-39037819 MsG0180002490.01.T01:CDS
TTGGAAAGCAGTCCGCTAAA+GGG 0.505396 1:-39041805 MsG0180002490.01.T01:CDS
TTCACGATGGTCTTAGGGAA+TGG 0.509174 1:-39044789 None:intergenic
AGCTTCCTATGTTGCGTCAA+GGG 0.509240 1:-39038280 MsG0180002490.01.T01:CDS
CTGCAGAACTGTAGGTGATA+GGG 0.511631 1:+39036795 None:intergenic
GTTGTTGATGGTTGTTGTGG+TGG 0.512794 1:-39044754 MsG0180002490.01.T01:CDS
CAGTCCTGTATTTACACACA+TGG 0.513502 1:-39036842 MsG0180002490.01.T02:CDS
TGGAAGTTCTTCGGTGTGGA+AGG 0.515956 1:-39036818 MsG0180002490.01.T02:CDS
GTTCATCTTTAGGCTGAGAA+AGG 0.516370 1:+39041756 None:intergenic
CCAGCCATGTGTGTAAATAC+AGG 0.517118 1:+39036838 None:intergenic
AGCTTCCTATGTTGCGTCAA+GGG 0.519696 1:-39042286 MsG0180002490.01.T01:CDS
GAAGGTTGTTGCAATTAAGG+AGG 0.520312 1:-39038040 MsG0180002490.01.T01:CDS
GAGTTGGTTGTTCTGTTCCT+CGG 0.521590 1:-39037979 MsG0180002490.01.T01:CDS
AAGCTTCACAATCCCTTTAG+CGG 0.524791 1:+39037807 None:intergenic
AAGCTTCACAATCCCTTTAG+CGG 0.524791 1:+39041793 None:intergenic
ACAAAATACACAGGAGAGAG+CGG 0.525839 1:+39043256 None:intergenic
GAGATTTGTTCATTGTGCCA+TGG 0.536833 1:-39037470 MsG0180002490.01.T02:CDS
GTGGTTCGTGATCGTGATGT+TGG 0.539420 1:-39044735 MsG0180002490.01.T01:intron
AGATTCCATTAGGACCAGTC+AGG 0.543055 1:+39037911 None:intergenic
AGATTCCATTAGGACCAGTC+AGG 0.543055 1:+39041897 None:intergenic
GTTGCCGTGAGAGAAGCCTT+GGG 0.543496 1:-39043235 MsG0180002490.01.T01:CDS
AAGAAAGTGTACGGTGGCCA+TGG 0.543921 1:-39042338 MsG0180002490.01.T01:CDS
TCACTTAGCCATTGTAAGCA+TGG 0.547315 1:+39043206 None:intergenic
GGTCTTAGGGAATGGTTTCG+TGG 0.547731 1:-39044781 MsG0180002490.01.T01:CDS
TTATATTCTACTTTGGAGGA+GGG 0.549665 1:+39036701 None:intergenic
ACTTCAAAAGCACACAAAGC+TGG 0.550550 1:-39037952 MsG0180002490.01.T01:CDS
ACTTCAAAAGCACACAAAGC+TGG 0.550550 1:-39041938 MsG0180002490.01.T01:CDS
TTAAAGACAGATCAAAATAG+AGG 0.551218 1:+39036530 None:intergenic
CTCGGTGTCCACAACACCAA+AGG 0.551798 1:+39037999 None:intergenic
CCTGTATTTACACACATGGC+TGG 0.553443 1:-39036838 MsG0180002490.01.T02:CDS
GTTCATCTTTAGGCTGAGGA+AGG 0.553830 1:+39037770 None:intergenic
ATGCTCCCTTGACGCAACAT+AGG 0.553886 1:+39038275 None:intergenic
GGTTTATTCCATGCTTACAA+TGG 0.554104 1:-39043214 MsG0180002490.01.T01:CDS
GTTTAGGAGCTGATCTTGTG+AGG 0.556251 1:-39037632 MsG0180002490.01.T02:CDS
GTTTAGGAGCTGATCTTGTG+AGG 0.556251 1:-39041619 MsG0180002490.01.T01:CDS
ATGGTGGATCGTACTATGCT+TGG 0.556355 1:-39042319 MsG0180002490.01.T01:CDS
CAATCAGCTAAGAAAGTGTA+CGG 0.558372 1:-39038341 MsG0180002490.01.T01:intron
ATGTTCCCTTGACGCAACAT+AGG 0.565357 1:+39042281 None:intergenic
TGTTGATGGTAAGAGAGTCT+TGG 0.566059 1:-39037511 MsG0180002490.01.T02:CDS
AACAATGTGAAGACACTCGT+TGG 0.569108 1:-39037838 MsG0180002490.01.T01:CDS
AACAATGTGAAGACACTCGT+TGG 0.569108 1:-39041824 MsG0180002490.01.T01:CDS
GCAGAATCACAAGAGAATCC+AGG 0.572154 1:+39037585 None:intergenic
GCAGAATCACAAGAGAATCC+AGG 0.572154 1:+39041572 None:intergenic
GAGCTTCCTATGTTGCGTCA+AGG 0.572226 1:-39038281 MsG0180002490.01.T01:CDS
AGAAGCTCTTCCGTTCAAAG+AGG 0.572950 1:-39036744 MsG0180002490.01.T02:CDS
CAATCAGCTAAGAAAGTGTA+CGG 0.575765 1:-39042347 MsG0180002490.01.T01:intron
ATGGTGGATCGTACTATGCT+TGG 0.575947 1:-39038313 MsG0180002490.01.T01:CDS
AGAGAATCCAGGAGAGCACA+TGG 0.578294 1:+39037596 None:intergenic
AGAGAATCCAGGAGAGCACA+TGG 0.578294 1:+39041583 None:intergenic
TAAACCCAAGGCTTCTCTCA+CGG 0.578317 1:+39043231 None:intergenic
AAGGTTGTTGCAATTAAGGA+GGG 0.584487 1:-39038039 MsG0180002490.01.T01:CDS
CGCAACATAGGAAGCTCAGA+AGG 0.585364 1:+39038287 None:intergenic
CGCAACATAGGAAGCTCAGA+AGG 0.585364 1:+39042293 None:intergenic
CATCAGCAGTCCTCTTTGAA+CGG 0.585723 1:+39036734 None:intergenic
AAAGTGTACGGTGGCCATGG+TGG 0.590216 1:-39042335 MsG0180002490.01.T01:CDS
GTTGTTCTGAAGAACTAACT+TGG 0.590453 1:+39038244 None:intergenic
GTTGTTCTGAAGAACTAACT+TGG 0.590453 1:+39042250 None:intergenic
AAAGCAGCCTGCAGAACTGT+AGG 0.593333 1:+39036787 None:intergenic
CAGGTTACTTACATTGTTAG+GGG 0.593840 1:-39037558 MsG0180002490.01.T02:CDS
CAGGTTACTTACATTGTTAG+GGG 0.593840 1:-39041545 MsG0180002490.01.T01:CDS
GCTACCTGAATCAGAGGAGA+AGG 0.597534 1:-39038058 MsG0180002490.01.T01:CDS
GATTGCTGACAATGATGGAA+TGG 0.599379 1:-39037430 MsG0180002490.01.T02:CDS
CAAAATACACAGGAGAGAGC+GGG 0.599538 1:+39043257 None:intergenic
GGTGTTGTTGATGGTTGTTG+TGG 0.599815 1:-39044757 MsG0180002490.01.T01:CDS
TGGTGTTGTGGACACCGAGT+TGG 0.602541 1:-39037995 MsG0180002490.01.T01:CDS
ATGTTGCGTCAAGGGAGCAT+TGG 0.603762 1:-39038272 MsG0180002490.01.T01:CDS
ATCAACCTGACGATGGTGGA+AGG 0.604955 1:+39043130 None:intergenic
GAGCTTCCTATGTTGCGTCA+AGG 0.607845 1:-39042287 MsG0180002490.01.T01:CDS
CCACCATGTCACAACACCAA+AGG 0.611673 1:+39042006 None:intergenic
AAGAAAGTGTACGGTAGCCA+TGG 0.611708 1:-39038332 MsG0180002490.01.T01:CDS
CAACAAAGAGGACACTGAGT+TGG 0.612479 1:-39041981 MsG0180002490.01.T01:CDS
CAACCTCACCAACCAAAGGA+AGG 0.617830 1:+39037655 None:intergenic
CAACCTCACCAACCAAAGGA+AGG 0.617830 1:+39041642 None:intergenic
AGATGAACACAGGAAAGGCA+TGG 0.622196 1:-39037755 MsG0180002490.01.T01:CDS
AGATGAACACAGGAAAGGCA+TGG 0.622196 1:-39041741 MsG0180002490.01.T01:CDS
CTCAGCCTAAAGATGAACAC+AGG 0.623720 1:-39041751 MsG0180002490.01.T01:CDS
AGGTTACTTACATTGTTAGG+GGG 0.633919 1:-39037557 MsG0180002490.01.T02:CDS
AGGTTACTTACATTGTTAGG+GGG 0.633919 1:-39041544 MsG0180002490.01.T01:CDS
ATATGTATCCGTGATGATGA+AGG 0.638003 1:-39043302 MsG0180002490.01.T01:CDS
CTCAGCCTAAAGATGAACAC+AGG 0.641114 1:-39037765 MsG0180002490.01.T01:CDS
TAACATCAACCTGACGATGG+TGG 0.641364 1:+39043126 None:intergenic
AAACCAACCTCACCAACCAA+AGG 0.641668 1:+39037651 None:intergenic
AAACCAACCTCACCAACCAA+AGG 0.641668 1:+39041638 None:intergenic
TGGCTGGAAGTTCTTCGGTG+TGG 0.642740 1:-39036822 MsG0180002490.01.T02:CDS
AAGTTAGTTCTTCAGAACAA+CGG 0.643412 1:-39038242 MsG0180002490.01.T01:CDS
AAGTTAGTTCTTCAGAACAA+CGG 0.643412 1:-39042248 MsG0180002490.01.T01:CDS
CAAAGGTACCTTCATCATCA+CGG 0.644208 1:+39043294 None:intergenic
CCTAAAGATGAACACAGGAA+AGG 0.654035 1:-39037760 MsG0180002490.01.T01:CDS
CCTAAAGATGAACACAGGAA+AGG 0.654035 1:-39041746 MsG0180002490.01.T01:CDS
AAAGTGTACGGTAGCCATGG+TGG 0.654403 1:-39038329 MsG0180002490.01.T01:CDS
AATTGTGCTACCTGAATCAG+AGG 0.656682 1:-39038064 MsG0180002490.01.T01:CDS
ATGTTGCGTCAAGGGAACAT+TGG 0.658178 1:-39042278 MsG0180002490.01.T01:CDS
CATGGCTTTAAACTGTCTGG+AGG 0.658481 1:-39037737 MsG0180002490.01.T01:CDS
CATGGCTTTAAACTGTCTGG+AGG 0.658481 1:-39041723 MsG0180002490.01.T01:CDS
CCTTTGGTGTTGTGACATGG+TGG 0.659432 1:-39042006 MsG0180002490.01.T01:CDS
GTAAGCATGGAATAAACCCA+AGG 0.659668 1:+39043219 None:intergenic
GGGATAGTTTGAGCCAACAA+AGG 0.665882 1:+39043277 None:intergenic
TTAGAAGAATCAGAATACCT+CGG 0.668346 1:+39042215 None:intergenic
CTTAGGGAATGGTTTCGTGG+TGG 0.669383 1:-39044778 MsG0180002490.01.T01:CDS
CTCACGGCAACAAAATACAC+AGG 0.672089 1:+39043247 None:intergenic
GACATGGTGGTACAACAAAG+AGG 0.672878 1:-39041993 MsG0180002490.01.T01:CDS
GAGGAACAGAACAACCAACT+CGG 0.677495 1:+39037981 None:intergenic
CTGACAATGATGGAATGGAG+TGG 0.715524 1:-39037425 MsG0180002490.01.T02:CDS
CGGTGTCCACAACACCAAAG+GGG 0.716217 1:+39038001 None:intergenic
AAGCATAGTACGATCCACCA+TGG 0.721837 1:+39042321 None:intergenic
ACCATGTCACAACACCAAAG+GGG 0.723908 1:+39042008 None:intergenic
AAGCATAGTACGATCCACCA+TGG 0.727024 1:+39038315 None:intergenic
TCAGCTAAGAAAGTGTACGG+TGG 0.762192 1:-39042344 MsG0180002490.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAATTGATTGAATA+TGG + Chr1:39039915-39039934 None:intergenic 10.0%
!! ATTATTATTAGAATTCTTAA+TGG - Chr1:39043092-39043111 MsG0180002490.01.T01:intron 10.0%
!!! AATTTTATTTTGGATTTAAA+AGG - Chr1:39044627-39044646 MsG0180002490.01.T01:intron 10.0%
!! ATATATATGTATATATGATG+TGG - Chr1:39041085-39041104 MsG0180002490.01.T01:intron 15.0%
!! ATTATTATTGGAATTCTTAA+TGG - Chr1:39039086-39039105 MsG0180002490.01.T01:intron 15.0%
!! TTCTATATTATATTCTACTT+TGG + Chr1:39044523-39044542 None:intergenic 15.0%
!!! AACTTCAATTATTTTGAAAA+TGG - Chr1:39040151-39040170 MsG0180002490.01.T01:intron 15.0%
!!! ATTTTTGGTTTTTTTTACAA+GGG - Chr1:39042238-39042257 MsG0180002490.01.T01:CDS 15.0%
!!! GATTTGATGATAATTATTAT+TGG - Chr1:39039074-39039093 MsG0180002490.01.T01:intron 15.0%
!!! TAGAATTACGTTTTTTTTAA+TGG - Chr1:39044538-39044557 MsG0180002490.01.T01:intron 15.0%
!!! TATTTTTGGTTTTTTTTACA+AGG - Chr1:39042237-39042256 MsG0180002490.01.T01:CDS 15.0%
!! AAAGAATGAATAAAATAGAC+AGG - Chr1:39044784-39044803 MsG0180002490.01.T01:CDS 20.0%
!! AACAAATAACAAACAACAAA+AGG + Chr1:39043881-39043900 None:intergenic 20.0%
!! AAGAAAAATAACTATGTCTA+AGG + Chr1:39044732-39044751 None:intergenic 20.0%
!! AATCAATCATAAACAAACAT+AGG + Chr1:39041397-39041416 None:intergenic 20.0%
!! AATGCAAAAGTTGTATTTAA+TGG + Chr1:39044756-39044775 None:intergenic 20.0%
!! ATAAAAACTATGGTCTATAA+CGG + Chr1:39044587-39044606 None:intergenic 20.0%
!! ATCTAATGATAGTAAGTAAA+GGG + Chr1:39042647-39042666 None:intergenic 20.0%
!! ATGCAAAAGTTGTATTTAAT+GGG + Chr1:39044755-39044774 None:intergenic 20.0%
!! ATGTTGATATTTAAAAATGG+TGG - Chr1:39043509-39043528 MsG0180002490.01.T01:intron 20.0%
!! ATTAAATGAATTGTGAGAAA+TGG - Chr1:39040326-39040345 MsG0180002490.01.T01:intron 20.0%
!! ATTTCTCACAATTCATTTAA+TGG + Chr1:39040327-39040346 None:intergenic 20.0%
!! CATAAAGTAGATAAAAACTA+TGG + Chr1:39044597-39044616 None:intergenic 20.0%
!! GTTGAATTTAAATTTGGATT+AGG + Chr1:39038666-39038685 None:intergenic 20.0%
!! TAAAGGGTTGAATTTAAATT+TGG + Chr1:39038672-39038691 None:intergenic 20.0%
!! TAAATGTAATTAAGTACATG+CGG + Chr1:39044046-39044065 None:intergenic 20.0%
!! TAAATTGATTGAATATGGTT+AGG + Chr1:39039910-39039929 None:intergenic 20.0%
!! TATATTATATTCTACTTTGG+AGG + Chr1:39044520-39044539 None:intergenic 20.0%
!! TCAACATATTATACTTACTA+TGG - Chr1:39044331-39044350 MsG0180002490.01.T01:intron 20.0%
!! TGGATGTTGATATTTAAAAA+TGG - Chr1:39043506-39043525 MsG0180002490.01.T01:intron 20.0%
!! TTCAGAATATTTCCATAAAA+AGG - Chr1:39044199-39044218 MsG0180002490.01.T01:intron 20.0%
!! TTGGATGTTGATATTAAAAA+TGG - Chr1:39039519-39039538 MsG0180002490.01.T01:intron 20.0%
!! TTTATCGCTTAATATAAGTA+GGG - Chr1:39041809-39041828 MsG0180002490.01.T01:CDS 20.0%
!!! AAGTTTCTGGAATTTTATTT+TGG - Chr1:39044617-39044636 MsG0180002490.01.T01:intron 20.0%
!!! ATCAACTTTTTTTTTTGTAG+TGG + Chr1:39042440-39042459 None:intergenic 20.0%
!!! GTTTGTTTTTTAAGGTTTAT+GGG - Chr1:39036647-39036666 MsG0180002490.01.T02:three_prime_UTR 20.0%
!!! TATATGTATGCATATTGTTT+TGG - Chr1:39041732-39041751 MsG0180002490.01.T01:CDS 20.0%
!!! TATTTAATTCAAGTTTGCTT+TGG - Chr1:39037337-39037356 MsG0180002490.01.T02:intron 20.0%
!!! TCTTTATTGGTGTTTATTTT+GGG - Chr1:39037642-39037661 MsG0180002490.01.T02:CDS 20.0%
!!! TGGTTTTATATGATTAAATG+AGG - Chr1:39040242-39040261 MsG0180002490.01.T01:intron 20.0%
!!! TTCATAAACTATCCTTTTTA+TGG + Chr1:39044214-39044233 None:intergenic 20.0%
!!! TTTAATCAACTTTTTTTGAG+TGG + Chr1:39038533-39038552 None:intergenic 20.0%
!!! TTTTAAATATCAACATCCAA+TGG + Chr1:39043505-39043524 None:intergenic 20.0%
!!! TTTTATCGCTTAATATAAGT+AGG - Chr1:39041808-39041827 MsG0180002490.01.T01:CDS 20.0%
!!! TTTTTAATATCAACATCCAA+TGG + Chr1:39039519-39039538 None:intergenic 20.0%
!!! TTTTTGGTTTTTTTTACAAG+GGG - Chr1:39042239-39042258 MsG0180002490.01.T01:CDS 20.0%
! AACAATGCATAAAATTTGCA+AGG - Chr1:39038488-39038507 MsG0180002490.01.T01:intron 25.0%
! AAGTTAAGAAAAACTCACTT+AGG + Chr1:39043833-39043852 None:intergenic 25.0%
! AATGTTATGATTATGTGGAT+TGG - Chr1:39040911-39040930 MsG0180002490.01.T01:intron 25.0%
! ACACAACATAAATGAAACAT+GGG + Chr1:39036831-39036850 None:intergenic 25.0%
! ACATAGAATAAAAACTTGGA+AGG - Chr1:39039744-39039763 MsG0180002490.01.T01:intron 25.0%
! AGGTACAAGATAATAAATAG+TGG + Chr1:39038250-39038269 None:intergenic 25.0%
! AGTTAAGAAAAACTCACTTA+GGG + Chr1:39043832-39043851 None:intergenic 25.0%
! ATAATAAATAGTGAGACTAG+CGG + Chr1:39038241-39038260 None:intergenic 25.0%
! CAAAAATAGTAGATTTGCAT+CGG + Chr1:39038382-39038401 None:intergenic 25.0%
! CATCTAATGATAGTAAGTAA+AGG + Chr1:39042648-39042667 None:intergenic 25.0%
! CCATTCATGAAAGATTTATA+AGG + Chr1:39040225-39040244 None:intergenic 25.0%
! CCTTATAAATCTTTCATGAA+TGG - Chr1:39040222-39040241 MsG0180002490.01.T01:intron 25.0%
! GACAACATAGAATAAAAACT+TGG - Chr1:39039740-39039759 MsG0180002490.01.T01:intron 25.0%
! GAGATACTCGTAAAAAAAAA+GGG + Chr1:39042310-39042329 None:intergenic 25.0%
! GATGTTGATATTAAAAATGG+TGG - Chr1:39039522-39039541 MsG0180002490.01.T01:intron 25.0%
! GGTACAAGATAATAAATAGT+GGG + Chr1:39038249-39038268 None:intergenic 25.0%
! GGTGAATTTAAATTTGGATT+AGG + Chr1:39042625-39042644 None:intergenic 25.0%
! GTCATATGTTGAAATGTAAA+AGG - Chr1:39040676-39040695 MsG0180002490.01.T01:intron 25.0%
! TAAAGGGGTGAATTTAAATT+TGG + Chr1:39042631-39042650 None:intergenic 25.0%
! TATCTACTTTATGAAGTTTC+TGG - Chr1:39044604-39044623 MsG0180002490.01.T01:intron 25.0%
! TCTAATGATAGTAAGTAAAG+GGG + Chr1:39042646-39042665 None:intergenic 25.0%
! TCTCTTAATCAATGTCTTAA+GGG + Chr1:39037788-39037807 None:intergenic 25.0%
! TGAAAGATTTATAAGGCAAT+TGG + Chr1:39040218-39040237 None:intergenic 25.0%
! TGTACTTAATTACATTTACC+AGG - Chr1:39044048-39044067 MsG0180002490.01.T01:intron 25.0%
! TTAAAGACAGATCAAAATAG+AGG + Chr1:39044687-39044706 None:intergenic 25.0%
! TTCTCTTAATCAATGTCTTA+AGG + Chr1:39037789-39037808 None:intergenic 25.0%
!! AATATTCTGAAAACAGTTTG+AGG + Chr1:39044190-39044209 None:intergenic 25.0%
!! AATTATGATGATGATGTTGA+TGG - Chr1:39040398-39040417 MsG0180002490.01.T01:intron 25.0%
!! GAGTTGAATAGAAAAAGTAT+TGG - Chr1:39037888-39037907 MsG0180002490.01.T01:CDS 25.0%
!! GATATTTAAAAATGGTGGAA+GGG - Chr1:39043514-39043533 MsG0180002490.01.T01:intron 25.0%
!! TAAGTATTTATGAAGCACTT+TGG - Chr1:39044145-39044164 MsG0180002490.01.T01:intron 25.0%
!! TGATATTAAAAATGGTGGAA+GGG - Chr1:39039527-39039546 MsG0180002490.01.T01:intron 25.0%
!! TGATATTTAAAAATGGTGGA+AGG - Chr1:39043513-39043532 MsG0180002490.01.T01:intron 25.0%
!! TTGATATTAAAAATGGTGGA+AGG - Chr1:39039526-39039545 MsG0180002490.01.T01:intron 25.0%
!!! GGTTTGTTTTTTAAGGTTTA+TGG - Chr1:39036646-39036665 MsG0180002490.01.T02:three_prime_UTR 25.0%
!!! GTCTTTATTGGTGTTTATTT+TGG - Chr1:39037641-39037660 MsG0180002490.01.T02:CDS 25.0%
!!! GTTTTGTTTTGGAAATGAAT+TGG - Chr1:39039971-39039990 MsG0180002490.01.T01:intron 25.0%
!!! TAATGAAGTTATTTCTTGTG+TGG - Chr1:39036980-39036999 MsG0180002490.01.T02:intron 25.0%
!!! TACGTTTTTTTTAATGGCAA+TGG - Chr1:39044544-39044563 MsG0180002490.01.T01:intron 25.0%
!!! TCAATTTGGTGTTTTTTCTT+CGG - Chr1:39037360-39037379 MsG0180002490.01.T02:intron 25.0%
!!! TGATTATGTTGATGATAATG+TGG - Chr1:39040471-39040490 MsG0180002490.01.T01:intron 25.0%
!!! TGCATATTGTTTTGGATTTT+TGG - Chr1:39041740-39041759 MsG0180002490.01.T01:CDS 25.0%
!!! TTGTATTAGATGGTGTTATT+TGG - Chr1:39036940-39036959 MsG0180002490.01.T02:intron 25.0%
!!! TTTTGGTTTTTTTTACAAGG+GGG - Chr1:39042240-39042259 MsG0180002490.01.T01:CDS 25.0%
AACTGAAATCATGACAGAAA+AGG + Chr1:39037100-39037119 None:intergenic 30.0%
AATCCAGTAAAGATTCCATT+AGG + Chr1:39039330-39039349 None:intergenic 30.0%
ACAAGAGAGTTTATACAATG+AGG + Chr1:39042115-39042134 None:intergenic 30.0%
ACACGAAAAAACAAAGCAAA+GGG + Chr1:39042806-39042825 None:intergenic 30.0%
ACCTCAAAGAAACACAAATT+CGG + Chr1:39043964-39043983 None:intergenic 30.0%
ACTCAATATGATATGATGCA+TGG + Chr1:39040658-39040677 None:intergenic 30.0%
ATCCAATGACAGTAAGTAAA+GGG + Chr1:39038688-39038707 None:intergenic 30.0%
ATCTCCAAAAATATATGCCA+TGG + Chr1:39041675-39041694 None:intergenic 30.0%
ATGAATTGTGAGAAATGGTA+TGG - Chr1:39040331-39040350 MsG0180002490.01.T01:intron 30.0%
ATGTTGAAGTTGTGCATTAT+CGG - Chr1:39040617-39040636 MsG0180002490.01.T01:intron 30.0%
ATTAGCATACAATGTCTGTT+TGG - Chr1:39044093-39044112 MsG0180002490.01.T01:intron 30.0%
CACACAACATAAATGAAACA+TGG + Chr1:39036832-39036851 None:intergenic 30.0%
CGAGATACTCGTAAAAAAAA+AGG + Chr1:39042311-39042330 None:intergenic 30.0%
CGTAAACTATACAATGTCAT+TGG + Chr1:39036681-39036700 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - Chr1:39042395-39042414 MsG0180002490.01.T01:intron 30.0%
GATAATAATGTGATAGCTTG+AGG - Chr1:39041284-39041303 MsG0180002490.01.T01:intron 30.0%
GTAAAATAGAGTAAGTTGTG+TGG + Chr1:39036765-39036784 None:intergenic 30.0%
GTTAAGAAAAACTCACTTAG+GGG + Chr1:39043831-39043850 None:intergenic 30.0%
GTTTCATTTATGTTGTGTGT+TGG - Chr1:39036833-39036852 MsG0180002490.01.T02:CDS 30.0%
TAAACAAACATAGGCATTCA+AGG + Chr1:39041388-39041407 None:intergenic 30.0%
TACACTTATATGTAGCCTAA+AGG - Chr1:39040080-39040099 MsG0180002490.01.T01:intron 30.0%
TCACTTAGACATTGTAAACA+TGG + Chr1:39041855-39041874 None:intergenic 30.0%
TTACAGAGTTGAATTGTAAG+AGG - Chr1:39040709-39040728 MsG0180002490.01.T01:intron 30.0%
TTAGAAGAATCAGAATACCT+CGG + Chr1:39039002-39039021 None:intergenic 30.0%
TTCATGTTGTTGAATCTTTG+TGG - Chr1:39036609-39036628 MsG0180002490.01.T02:three_prime_UTR 30.0%
! AAGTTAGTTCTTCAGAACAA+CGG - Chr1:39038966-39038985 MsG0180002490.01.T01:intron 30.0%
! ATAATAAATAGTGGGACTAG+CGG + Chr1:39042086-39042105 None:intergenic 30.0%
! ATTATATTCTACTTTGGAGG+AGG + Chr1:39044517-39044536 None:intergenic 30.0%
! ATTGCCTCAATTGGATTTTT+AGG - Chr1:39044656-39044675 MsG0180002490.01.T01:intron 30.0%
! CGATGCAAATCTACTATTTT+TGG - Chr1:39038380-39038399 MsG0180002490.01.T01:intron 30.0%
! GGTGTATGTTTTGTATTAGA+TGG - Chr1:39036930-39036949 MsG0180002490.01.T02:intron 30.0%
! TTATAAGGCAATTGGTTCAA+AGG + Chr1:39040210-39040229 None:intergenic 30.0%
! TTATATTCTACTTTGGAGGA+GGG + Chr1:39044516-39044535 None:intergenic 30.0%
! TTGACCATGGCATATATTTT+TGG - Chr1:39041668-39041687 MsG0180002490.01.T01:CDS 30.0%
! TTGCCTCAATTGGATTTTTA+GGG - Chr1:39044657-39044676 MsG0180002490.01.T01:intron 30.0%
!! ATGTGGTTTGGTGTATTTAT+AGG + Chr1:39038774-39038793 None:intergenic 30.0%
!! ATTGTGATTTGTTGAATGTG+TGG - Chr1:39040511-39040530 MsG0180002490.01.T01:intron 30.0%
!! TATTAGATGGTGTTATTTGG+TGG - Chr1:39036943-39036962 MsG0180002490.01.T02:intron 30.0%
!!! AAGGAGTGTTCAAACTTTTT+GGG - Chr1:39037414-39037433 MsG0180002490.01.T02:CDS 30.0%
!!! ACTTTTTTTTTTGTAGTGGC+CGG + Chr1:39042436-39042455 None:intergenic 30.0%
!!! GATCTAACTTGGTTTTGTTT+TGG - Chr1:39039960-39039979 MsG0180002490.01.T01:intron 30.0%
!!! TCTTTGTTTTTTAGGTGCTA+TGG - Chr1:39036864-39036883 MsG0180002490.01.T02:intron 30.0%
!!! TGATAACGAGTTTTAAGTAG+CGG - Chr1:39038707-39038726 MsG0180002490.01.T01:intron 30.0%
!!! TGTTTTTTAAGGTTTATGGG+TGG - Chr1:39036650-39036669 MsG0180002490.01.T02:three_prime_UTR 30.0%
!!! TTTACTGATTTTTTCCTGAC+TGG - Chr1:39039303-39039322 MsG0180002490.01.T01:intron 30.0%
!!! TTTGTGGGGTTTGTTTTTTA+AGG - Chr1:39036639-39036658 MsG0180002490.01.T02:three_prime_UTR 30.0%
AAAGGGATGTTTGATTACGA+GGG - Chr1:39037460-39037479 MsG0180002490.01.T02:CDS 35.0%
AACCCTTTACTTACTGTCAT+TGG - Chr1:39038683-39038702 MsG0180002490.01.T01:intron 35.0%
AAGGTTGCTTATGTTCTTCA+AGG - Chr1:39039020-39039039 MsG0180002490.01.T01:intron 35.0%
AAGGTTGTTGCAATTAAGGA+GGG - Chr1:39039169-39039188 MsG0180002490.01.T01:intron 35.0%
AAGTGTAGTACAGTATACCT+TGG + Chr1:39040067-39040086 None:intergenic 35.0%
AATAATCTCATCAGTCACAG+CGG + Chr1:39041711-39041730 None:intergenic 35.0%
ACAAGAGAGTTTATACAACG+AGG + Chr1:39038270-39038289 None:intergenic 35.0%
ACGCGAAAAAACATAGCAAA+GGG + Chr1:39038835-39038854 None:intergenic 35.0%
ACTCCAGAGACAAATAAGTA+AGG + Chr1:39037276-39037295 None:intergenic 35.0%
AGGATATGTGAGTGATTGTT+AGG - Chr1:39040262-39040281 MsG0180002490.01.T01:intron 35.0%
AGGTTACTTACATTGTTAGG+GGG - Chr1:39039670-39039689 MsG0180002490.01.T01:intron 35.0%
ATCATAGCTTGGATCTAACT+TGG - Chr1:39039949-39039968 MsG0180002490.01.T01:intron 35.0%
ATCATGACAGAAAAGGAAAC+AGG + Chr1:39037093-39037112 None:intergenic 35.0%
ATCCAAAGCACAAAACAGTA+GGG + Chr1:39037148-39037167 None:intergenic 35.0%
ATGATTTCTTCGTGTTTAGC+CGG - Chr1:39040034-39040053 MsG0180002490.01.T01:intron 35.0%
ATTAATTGTTCAATCCTGCC+TGG + Chr1:39044069-39044088 None:intergenic 35.0%
CAAATGTGAACAAGAAGAGA+TGG + Chr1:39036712-39036731 None:intergenic 35.0%
CACACGAAAAAACAAAGCAA+AGG + Chr1:39042807-39042826 None:intergenic 35.0%
CAGGTTACTTACATTGTTAG+GGG - Chr1:39039669-39039688 MsG0180002490.01.T01:intron 35.0%
CATCCAATGACAGTAAGTAA+AGG + Chr1:39038689-39038708 None:intergenic 35.0%
CATCCCTAAAAATCCAATTG+AGG + Chr1:39044663-39044682 None:intergenic 35.0%
CCTCAAAGAAACACAAATTC+GGG + Chr1:39043963-39043982 None:intergenic 35.0%
CCTCAACTAAGTATACCTTT+AGG + Chr1:39040098-39040117 None:intergenic 35.0%
CGGTGAATGTTATGATTATG+TGG - Chr1:39040906-39040925 MsG0180002490.01.T01:intron 35.0%
CTGTGTATTCGTGTCTTTAT+TGG - Chr1:39037629-39037648 MsG0180002490.01.T02:CDS 35.0%
CTTAATTACATTTACCAGGC+AGG - Chr1:39044052-39044071 MsG0180002490.01.T01:intron 35.0%
CTTGTTTGTGCTTATACACT+TGG - Chr1:39041004-39041023 MsG0180002490.01.T01:intron 35.0%
GACTTGATGAATTTGTGCAT+TGG - Chr1:39040876-39040895 MsG0180002490.01.T01:intron 35.0%
GCAGGTTACTTACATTGTTA+GGG - Chr1:39039668-39039687 MsG0180002490.01.T01:intron 35.0%
GGTTTATTCCATGCTTACAA+TGG - Chr1:39038000-39038019 MsG0180002490.01.T01:CDS 35.0%
GTAAACATGGAATAAACCCA+AGG + Chr1:39041842-39041861 None:intergenic 35.0%
GTACCTTACTTATTTGTCTC+TGG - Chr1:39037270-39037289 MsG0180002490.01.T02:intron 35.0%
GTTGAGCTAGTCAATGTAAT+TGG - Chr1:39040561-39040580 MsG0180002490.01.T01:intron 35.0%
TACACTTTCTTAGCTGATTG+AGG + Chr1:39038867-39038886 None:intergenic 35.0%
TAGACGAACTTGGTTGAAAA+TGG - Chr1:39040182-39040201 MsG0180002490.01.T01:intron 35.0%
TCATGTGATGCTAGTATTCT+AGG - Chr1:39041329-39041348 MsG0180002490.01.T01:intron 35.0%
TGCAGGTTACTTACATTGTT+AGG - Chr1:39039667-39039686 MsG0180002490.01.T01:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - Chr1:39042400-39042419 MsG0180002490.01.T01:intron 35.0%
TGCATAAAATTTGCAAGGTC+CGG - Chr1:39038493-39038512 MsG0180002490.01.T01:intron 35.0%
TGTTGAAGTTGTGCATTATC+GGG - Chr1:39040618-39040637 MsG0180002490.01.T01:intron 35.0%
TTAATGCGGCAACTTAACAA+TGG + Chr1:39038218-39038237 None:intergenic 35.0%
TTGATGAATTTGTGCATTGG+TGG - Chr1:39040879-39040898 MsG0180002490.01.T01:intron 35.0%
TTGGGTGTTCTACCTATATA+TGG - Chr1:39037660-39037679 MsG0180002490.01.T02:CDS 35.0%
TTGGTGTATATGTACATTGG+TGG - Chr1:39040930-39040949 MsG0180002490.01.T01:intron 35.0%
TTTGGAAGAGCTTATGAAAC+AGG - Chr1:39044163-39044182 MsG0180002490.01.T01:intron 35.0%
! AAAACTTGGAAGGTATGAGT+TGG - Chr1:39039754-39039773 MsG0180002490.01.T01:intron 35.0%
! ATATGTATCCGTGATGATGA+AGG - Chr1:39037912-39037931 MsG0180002490.01.T01:CDS 35.0%
! ATTTGTGCATTGGTGGAATT+CGG - Chr1:39040886-39040905 MsG0180002490.01.T01:intron 35.0%
! CAAGTTTGCTTTGGTCAATT+TGG - Chr1:39037346-39037365 MsG0180002490.01.T02:intron 35.0%
! CAATCAGCTAAGAAAGTGTA+CGG - Chr1:39038867-39038886 MsG0180002490.01.T01:intron 35.0%
! CCTAAAGGTATACTTAGTTG+AGG - Chr1:39040095-39040114 MsG0180002490.01.T01:intron 35.0%
! CTTTGTGGCTAGTTATTTGT+GGG - Chr1:39036624-39036643 MsG0180002490.01.T02:three_prime_UTR 35.0%
! GAGGTATTCTGATTCTTCTA+AGG - Chr1:39039001-39039020 MsG0180002490.01.T01:intron 35.0%
! GGAAGGTTAGTTAGAAAAAG+TGG + Chr1:39036735-39036754 None:intergenic 35.0%
! GGATTGGTGTATATGTACAT+TGG - Chr1:39040927-39040946 MsG0180002490.01.T01:intron 35.0%
! GGATTTTCAACTGAGTTTGT+GGG - Chr1:39039345-39039364 MsG0180002490.01.T01:intron 35.0%
! GTCGTGTCTTTTTATGTTGT+TGG - Chr1:39041574-39041593 MsG0180002490.01.T01:CDS 35.0%
! GTGTACTTTTACATTGTCGT+TGG - Chr1:39040586-39040605 MsG0180002490.01.T01:intron 35.0%
! GTTAGGTGTTTGAAATCCAT+TGG + Chr1:39039893-39039912 None:intergenic 35.0%
! TCTTTGTGGCTAGTTATTTG+TGG - Chr1:39036623-39036642 MsG0180002490.01.T02:three_prime_UTR 35.0%
! TGGATTTTCAACTGAGTTTG+TGG - Chr1:39039344-39039363 MsG0180002490.01.T01:intron 35.0%
! TGTACTTTTAAGCATGCCAA+TGG - Chr1:39039874-39039893 MsG0180002490.01.T01:intron 35.0%
! TTTGTGGCTAGTTATTTGTG+GGG - Chr1:39036625-39036644 MsG0180002490.01.T02:three_prime_UTR 35.0%
!! AACTCTAAGATCGAGTTCAA+CGG - Chr1:39038166-39038185 MsG0180002490.01.T01:intron 35.0%
!! ACTTATTTGTCTCTGGAGTT+TGG - Chr1:39037277-39037296 MsG0180002490.01.T02:intron 35.0%
!! CTTCTAAGAGTATCATAGCT+TGG - Chr1:39039938-39039957 MsG0180002490.01.T01:intron 35.0%
!! GGATCTTGTTTACTTGGTTT+TGG - Chr1:39040122-39040141 MsG0180002490.01.T01:intron 35.0%
!! GTTGCGATAGAGTTTGTTTT+AGG - Chr1:39037541-39037560 MsG0180002490.01.T02:CDS 35.0%
!! GTTGTTCTGAAGAACTAACT+TGG + Chr1:39038967-39038986 None:intergenic 35.0%
!! GTTTCTTTGAGGTGTTTCTT+TGG - Chr1:39043971-39043990 MsG0180002490.01.T01:intron 35.0%
!! TCAGGTTGATGTTACAGATT+TGG - Chr1:39038097-39038116 MsG0180002490.01.T01:intron 35.0%
!! TGAAGTTATTTCTTGTGTGG+TGG - Chr1:39036983-39037002 MsG0180002490.01.T02:intron 35.0%
!! TGATTTGTTGAAACAGGAAG+TGG - Chr1:39039112-39039131 MsG0180002490.01.T01:intron 35.0%
!! TGGTGATGATTTGTTGAAAC+AGG - Chr1:39039106-39039125 MsG0180002490.01.T01:intron 35.0%
!!! AAATTGGTTTTGGTGGTTGT+GGG - Chr1:39037569-39037588 MsG0180002490.01.T02:CDS 35.0%
!!! ACATTGGTGGATTTTGTTGA+CGG - Chr1:39040943-39040962 MsG0180002490.01.T01:intron 35.0%
!!! ATCAACTTTTTTTGAGTGGC+TGG + Chr1:39038529-39038548 None:intergenic 35.0%
!!! ATTTGGTGTTTTTTCTTCGG+TGG - Chr1:39037363-39037382 MsG0180002490.01.T02:intron 35.0%
!!! GAAGGAGTGTTCAAACTTTT+TGG - Chr1:39037413-39037432 MsG0180002490.01.T02:CDS 35.0%
!!! GTAGTGTCTCAACCTTTTTT+GGG - Chr1:39036891-39036910 MsG0180002490.01.T02:intron 35.0%
!!! GTGATGGTTGGTTATTTTTG+TGG - Chr1:39036575-39036594 MsG0180002490.01.T02:three_prime_UTR 35.0%
!!! GTGATGTTGTATTTTGACCA+TGG - Chr1:39041655-39041674 MsG0180002490.01.T01:CDS 35.0%
!!! TCAACTTTTTTTGAGTGGCT+GGG + Chr1:39038528-39038547 None:intergenic 35.0%
!!! TGTAGTGTCTCAACCTTTTT+TGG - Chr1:39036890-39036909 MsG0180002490.01.T02:intron 35.0%
!!! TTGCTCGGTCTTTGTTTTTT+AGG - Chr1:39036856-39036875 MsG0180002490.01.T02:intron 35.0%
!!! TTTGTTTTAGGCGGTGAAAT+TGG - Chr1:39037553-39037572 MsG0180002490.01.T02:CDS 35.0%
!!! TTTTTTACAAGGGGGAAAAC+CGG - Chr1:39042248-39042267 MsG0180002490.01.T01:CDS 35.0%
AAAACGTAGCTTAGCTCAGT+TGG - Chr1:39038462-39038481 MsG0180002490.01.T01:intron 40.0%
AAAGGGATTGTGAAGCTTGA+CGG - Chr1:39039426-39039445 MsG0180002490.01.T01:intron 40.0%
AACAATGTGAAGACACTCGT+TGG - Chr1:39039390-39039409 MsG0180002490.01.T01:intron 40.0%
AAGCTTCACAATCCCTTTAG+CGG + Chr1:39039424-39039443 None:intergenic 40.0%
AAGGGATGTTTGATTACGAG+GGG - Chr1:39037461-39037480 MsG0180002490.01.T02:CDS 40.0%
AATTGTGCTACCTGAATCAG+AGG - Chr1:39039144-39039163 MsG0180002490.01.T01:intron 40.0%
ACAAAATACACAGGAGAGAG+CGG + Chr1:39037961-39037980 None:intergenic 40.0%
AGAATGCTAGATGAGTAACG+AGG - Chr1:39041174-39041193 MsG0180002490.01.T01:intron 40.0%
AGGAGTTTGATTGCCTCAAT+TGG - Chr1:39044647-39044666 MsG0180002490.01.T01:intron 40.0%
AGGTTTAGACTCTGATTAGG+TGG - Chr1:39041552-39041571 MsG0180002490.01.T01:CDS 40.0%
AGTATACCTTGGCATTTCAC+CGG + Chr1:39040056-39040075 None:intergenic 40.0%
AGTCTTGGAGACAACTTTGA+AGG - Chr1:39043718-39043737 MsG0180002490.01.T01:intron 40.0%
AGTGTGTGTTGAAAAGACTC+CGG + Chr1:39038141-39038160 None:intergenic 40.0%
ATAGCTTGAGGTGCAAGTAA+TGG - Chr1:39041296-39041315 MsG0180002490.01.T01:intron 40.0%
ATGATGTGCAGTTGACATCA+TGG - Chr1:39040748-39040767 MsG0180002490.01.T01:intron 40.0%
CACAAAAACGCGAAAGAACA+AGG + Chr1:39039856-39039875 None:intergenic 40.0%
CACGCGAAAAAACATAGCAA+AGG + Chr1:39038836-39038855 None:intergenic 40.0%
CAGAGTTGAATTGTAAGAGG+AGG - Chr1:39040712-39040731 MsG0180002490.01.T01:intron 40.0%
CAGTCCTGTATTTACACACA+TGG - Chr1:39044372-39044391 MsG0180002490.01.T01:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - Chr1:39042402-39042421 MsG0180002490.01.T01:intron 40.0%
CATAAAATTTGCAAGGTCCG+GGG - Chr1:39038495-39038514 MsG0180002490.01.T01:intron 40.0%
CATCCAAAGCACAAAACAGT+AGG + Chr1:39037149-39037168 None:intergenic 40.0%
CCCGAATTTGTGTTTCTTTG+AGG - Chr1:39043960-39043979 MsG0180002490.01.T01:intron 40.0%
CCTAAAGATGAACACAGGAA+AGG - Chr1:39039468-39039487 MsG0180002490.01.T01:intron 40.0%
CCTTTCCTGTGTTCATCTTT+AGG + Chr1:39039471-39039490 None:intergenic 40.0%
CGTAGGTTTAGACTCTGATT+AGG - Chr1:39041549-39041568 MsG0180002490.01.T01:CDS 40.0%
CTCGTAAGCTTGTACACTTA+GGG - Chr1:39042327-39042346 MsG0180002490.01.T01:CDS 40.0%
GAAAGGGATGTTTGATTACG+AGG - Chr1:39037459-39037478 MsG0180002490.01.T02:CDS 40.0%
GAAGGTTGTTGCAATTAAGG+AGG - Chr1:39039168-39039187 MsG0180002490.01.T01:intron 40.0%
GACAAGTAATTTCAGCATGC+CGG - Chr1:39038119-39038138 MsG0180002490.01.T01:intron 40.0%
GAGCTAGTCAATGTAATTGG+AGG - Chr1:39040564-39040583 MsG0180002490.01.T01:intron 40.0%
GATCTCGAATCAAAAGCGAT+CGG + Chr1:39037307-39037326 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - Chr1:39042401-39042420 MsG0180002490.01.T01:intron 40.0%
GCATAAAATTTGCAAGGTCC+GGG - Chr1:39038494-39038513 MsG0180002490.01.T01:intron 40.0%
GGAGAAGGTTGTTGCAATTA+AGG - Chr1:39039165-39039184 MsG0180002490.01.T01:intron 40.0%
GGTAGTAAGATAGACGAACT+TGG - Chr1:39040172-39040191 MsG0180002490.01.T01:intron 40.0%
GGTATACTTAGTTGAGGCAT+TGG - Chr1:39040101-39040120 MsG0180002490.01.T01:intron 40.0%
GGTCCTAATGGAATCTTTAC+TGG - Chr1:39039324-39039343 MsG0180002490.01.T01:intron 40.0%
GGTCTCGAAGCAAAAGTAAT+CGG + Chr1:39037180-39037199 None:intergenic 40.0%
GTAAGCATGGAATAAACCCA+AGG + Chr1:39037998-39038017 None:intergenic 40.0%
GTCTTTACCCCCTGTAATTT+GGG + Chr1:39042280-39042299 None:intergenic 40.0%
GTTCATCTTTAGGCTGAGAA+AGG + Chr1:39039461-39039480 None:intergenic 40.0%
TAGACTCTTCTAGATGCATG+TGG + Chr1:39040804-39040823 None:intergenic 40.0%
TAGAGTAAGTTGTGTGGCAA+TGG + Chr1:39036759-39036778 None:intergenic 40.0%
TCACTTAGCCATTGTAAGCA+TGG + Chr1:39038011-39038030 None:intergenic 40.0%
TCGAAGATTGCTGACAATGA+TGG - Chr1:39043779-39043798 MsG0180002490.01.T01:intron 40.0%
TCTCATCACACACCCAAAAA+AGG + Chr1:39036906-39036925 None:intergenic 40.0%
TCTCGTAAGCTTGTACACTT+AGG - Chr1:39042326-39042345 MsG0180002490.01.T01:CDS 40.0%
TGATATTTGCCCACTTGACA+GGG - Chr1:39041616-39041635 MsG0180002490.01.T01:CDS 40.0%
TGATGTGCAGTTGACATCAT+GGG - Chr1:39040749-39040768 MsG0180002490.01.T01:intron 40.0%
TGGTAAATCAGAGACTACGA+AGG + Chr1:39037688-39037707 None:intergenic 40.0%
TGGTAGATCTAGATTCGGAT+CGG - Chr1:39036513-39036532 MsG0180002490.01.T02:three_prime_UTR 40.0%
TGTCTTTACCCCCTGTAATT+TGG + Chr1:39042281-39042300 None:intergenic 40.0%
TGTGGTGGTAGATCTAGATT+CGG - Chr1:39036508-39036527 MsG0180002490.01.T02:three_prime_UTR 40.0%
TTGATATTTGCCCACTTGAC+AGG - Chr1:39041615-39041634 MsG0180002490.01.T01:CDS 40.0%
TTTGGGTGTGGTTTAACCAT+GGG - Chr1:39037431-39037450 MsG0180002490.01.T02:CDS 40.0%
! AAAACAGTAGGGCATTCGAT+AGG + Chr1:39037137-39037156 None:intergenic 40.0%
! AACGCGAAAGAACAAGGTTT+TGG + Chr1:39039850-39039869 None:intergenic 40.0%
! ACGCGAAAGAACAAGGTTTT+GGG + Chr1:39039849-39039868 None:intergenic 40.0%
! ACTTCAAAAGCACACAAAGC+TGG - Chr1:39039276-39039295 MsG0180002490.01.T01:intron 40.0%
! CGCTAACTCTTGTTGTGTTT+GGG - Chr1:39037036-39037055 MsG0180002490.01.T02:intron 40.0%
! GAGATTTGTTCATTGTGCCA+TGG - Chr1:39043744-39043763 MsG0180002490.01.T01:intron 40.0%
! GATTGCTGACAATGATGGAA+TGG - Chr1:39043784-39043803 MsG0180002490.01.T01:intron 40.0%
! GGCATTGGATCTTGTTTACT+TGG - Chr1:39040116-39040135 MsG0180002490.01.T01:intron 40.0%
! GTGATGCTAGTATTCTAGGA+AGG - Chr1:39041333-39041352 MsG0180002490.01.T01:intron 40.0%
! TCGCTAACTCTTGTTGTGTT+TGG - Chr1:39037035-39037054 MsG0180002490.01.T02:intron 40.0%
! TGCTAGTATTCTAGGAAGGA+TGG - Chr1:39041337-39041356 MsG0180002490.01.T01:intron 40.0%
! TGGTTTATGGTAGTGATGGT+TGG - Chr1:39036563-39036582 MsG0180002490.01.T02:three_prime_UTR 40.0%
! TTCGTGTGATCGTTCGATTT+TGG - Chr1:39042819-39042838 MsG0180002490.01.T01:intron 40.0%
! TTTGTGCTTTGGATGTTGGT+GGG - Chr1:39037154-39037173 MsG0180002490.01.T02:intron 40.0%
!! ACTACGAAGGCACCATATAT+AGG + Chr1:39037675-39037694 None:intergenic 40.0%
!! ACTCTAAGATCGAGTTCAAC+GGG - Chr1:39038167-39038186 MsG0180002490.01.T01:intron 40.0%
!! ATCGCTTTTGATTCGAGATC+GGG - Chr1:39037307-39037326 MsG0180002490.01.T02:intron 40.0%
!! ATTTGTCTCTGGAGTTTGGT+GGG - Chr1:39037281-39037300 MsG0180002490.01.T02:intron 40.0%
!! CAAAGGTACCTTCATCATCA+CGG + Chr1:39037923-39037942 None:intergenic 40.0%
!! CAGGTTGATGTTACAGACTT+TGG - Chr1:39041942-39041961 MsG0180002490.01.T01:CDS 40.0%
!! CTGTTTTGTGCTTTGGATGT+TGG - Chr1:39037150-39037169 MsG0180002490.01.T02:intron 40.0%
!! GATCGCTTTTGATTCGAGAT+CGG - Chr1:39037306-39037325 MsG0180002490.01.T02:intron 40.0%
!! GATGATGAAGGTACCTTTGT+TGG - Chr1:39037924-39037943 MsG0180002490.01.T01:CDS 40.0%
!! GTTCAAGTTGTTGGTGTTGA+TGG - Chr1:39043689-39043708 MsG0180002490.01.T01:intron 40.0%
!! TATGTTGTGTGTTGGTTGCT+CGG - Chr1:39036841-39036860 MsG0180002490.01.T02:CDS 40.0%
!! TATTTGTCTCTGGAGTTTGG+TGG - Chr1:39037280-39037299 MsG0180002490.01.T02:intron 40.0%
!! TCGTGATGTTGGTTAGTTTG+TGG - Chr1:39036490-39036509 MsG0180002490.01.T02:three_prime_UTR 40.0%
!! TGATGTTGGTTAGTTTGTGG+TGG - Chr1:39036493-39036512 MsG0180002490.01.T02:three_prime_UTR 40.0%
!! TGTTGATGGTAAGAGAGTCT+TGG - Chr1:39039716-39039735 MsG0180002490.01.T01:intron 40.0%
!! TTAGGCGGTGAAATTGGTTT+TGG - Chr1:39037559-39037578 MsG0180002490.01.T02:CDS 40.0%
!! TTTTGGGTGTGGTTTAACCA+TGG - Chr1:39037430-39037449 MsG0180002490.01.T02:CDS 40.0%
!! TTTTGTGCTTTGGATGTTGG+TGG - Chr1:39037153-39037172 MsG0180002490.01.T02:intron 40.0%
!! TTTTTCCTGACTGGTCCTAA+TGG - Chr1:39039312-39039331 MsG0180002490.01.T01:intron 40.0%
!!! AATTGGTTTTGGTGGTTGTG+GGG - Chr1:39037570-39037589 MsG0180002490.01.T02:CDS 40.0%
!!! CAACTTTTTTTGAGTGGCTG+GGG + Chr1:39038527-39038546 None:intergenic 40.0%
!!! GAAATTGGTTTTGGTGGTTG+TGG - Chr1:39037568-39037587 MsG0180002490.01.T02:CDS 40.0%
!!! GATGTGTTTTAGAGTGCATG+TGG + Chr1:39038791-39038810 None:intergenic 40.0%
!!! GCGATAGAGTTTGTTTTAGG+CGG - Chr1:39037544-39037563 MsG0180002490.01.T02:CDS 40.0%
!!! GTGTTCAAACTTTTTGGGTG+TGG - Chr1:39037419-39037438 MsG0180002490.01.T02:CDS 40.0%
!!! GTTTTAGAGTGCATGTGGTT+TGG + Chr1:39038786-39038805 None:intergenic 40.0%
AAACCAACCTCACCAACCAA+AGG + Chr1:39039579-39039598 None:intergenic 45.0%
AAGCATAGTACGATCCACCA+TGG + Chr1:39038896-39038915 None:intergenic 45.0%
ACAACCTTCTCCTCTGATTC+AGG + Chr1:39039157-39039176 None:intergenic 45.0%
ACACATGGCTGGAAGTTCTT+CGG - Chr1:39044387-39044406 MsG0180002490.01.T01:intron 45.0%
ACCAACCAAAGGAAGGTTCT+TGG + Chr1:39039568-39039587 None:intergenic 45.0%
ACCAAGAACCTTCCTTTGGT+TGG - Chr1:39039564-39039583 MsG0180002490.01.T01:intron 45.0%
ACCATGTCACAACACCAAAG+GGG + Chr1:39039209-39039228 None:intergenic 45.0%
ACTCATCCATACAGACAGGT+AGG + Chr1:39041457-39041476 None:intergenic 45.0%
ACTTACATTGTTAGGGGGAG+CGG - Chr1:39039675-39039694 MsG0180002490.01.T01:intron 45.0%
AGAAGCTCTTCCGTTCAAAG+AGG - Chr1:39044470-39044489 MsG0180002490.01.T01:intron 45.0%
AGATGAACACAGGAAAGGCA+TGG - Chr1:39039473-39039492 MsG0180002490.01.T01:intron 45.0%
AGATTCCATTAGGACCAGTC+AGG + Chr1:39039320-39039339 None:intergenic 45.0%
AGCTAATGTCTAGCTGCAAG+TGG - Chr1:39037203-39037222 MsG0180002490.01.T02:intron 45.0%
AGCTTCCTATGTTGCGTCAA+GGG - Chr1:39038928-39038947 MsG0180002490.01.T01:intron 45.0%
AGTAAGTTGTGTGGCAATGG+AGG + Chr1:39036756-39036775 None:intergenic 45.0%
AGTGAGACTAGCGGTTAATG+CGG + Chr1:39038232-39038251 None:intergenic 45.0%
ATATGAACTCAGCACAGAGG+CGG + Chr1:39037009-39037028 None:intergenic 45.0%
ATGTCTAGCTGCAAGTGGTT+TGG - Chr1:39037208-39037227 MsG0180002490.01.T02:intron 45.0%
ATGTTCCCTTGACGCAACAT+AGG + Chr1:39038936-39038955 None:intergenic 45.0%
ATGTTGCGTCAAGGGAACAT+TGG - Chr1:39038936-39038955 MsG0180002490.01.T01:intron 45.0%
CAAAATACACAGGAGAGAGC+GGG + Chr1:39037960-39037979 None:intergenic 45.0%
CAACAAAGAGGACACTGAGT+TGG - Chr1:39039233-39039252 MsG0180002490.01.T01:intron 45.0%
CACCATGTCACAACACCAAA+GGG + Chr1:39039210-39039229 None:intergenic 45.0%
CATCAGCAGTCCTCTTTGAA+CGG + Chr1:39044483-39044502 None:intergenic 45.0%
CCAGCCATGTGTGTAAATAC+AGG + Chr1:39044379-39044398 None:intergenic 45.0%
CCTGTATTTACACACATGGC+TGG - Chr1:39044376-39044395 MsG0180002490.01.T01:intron 45.0%
CGAATATGAACTCAGCACAG+AGG + Chr1:39037012-39037031 None:intergenic 45.0%
CTCACGGCAACAAAATACAC+AGG + Chr1:39037970-39037989 None:intergenic 45.0%
CTCAGCCTAAAGATGAACAC+AGG - Chr1:39039463-39039482 MsG0180002490.01.T01:intron 45.0%
CTCGTAAGCGTGTACACTTA+GGG - Chr1:39038419-39038438 MsG0180002490.01.T01:intron 45.0%
CTCTTGTGATTCTGCTTTGC+AGG - Chr1:39039650-39039669 MsG0180002490.01.T01:intron 45.0%
CTGCAGAACTGTAGGTGATA+GGG + Chr1:39044422-39044441 None:intergenic 45.0%
CTGTAACATCAACCTGACGA+TGG + Chr1:39038094-39038113 None:intergenic 45.0%
CTGTGTAGGAGTAGTTGCTT+TGG - Chr1:39041482-39041501 MsG0180002490.01.T01:intron 45.0%
CTGTGTTCATCTTTAGGCTG+AGG + Chr1:39039465-39039484 None:intergenic 45.0%
GAACACCAAGAACCTTCCTT+TGG - Chr1:39039560-39039579 MsG0180002490.01.T01:intron 45.0%
GACATGGTGGTACAACAAAG+AGG - Chr1:39039221-39039240 MsG0180002490.01.T01:intron 45.0%
GAGGAACAGAACAACCAACT+CGG + Chr1:39039250-39039269 None:intergenic 45.0%
GATTACGAGGGGTCTTTCTT+TGG - Chr1:39037472-39037491 MsG0180002490.01.T02:CDS 45.0%
GCAGAATCACAAGAGAATCC+AGG + Chr1:39039645-39039664 None:intergenic 45.0%
GCTGATCTTGTGAGGATTGA+TGG - Chr1:39039603-39039622 MsG0180002490.01.T01:intron 45.0%
GCTGGTTATGGTGTCTTCTT+CGG - Chr1:39037230-39037249 MsG0180002490.01.T02:intron 45.0%
GGGATAGTTTGAGCCAACAA+AGG + Chr1:39037940-39037959 None:intergenic 45.0%
GGTAGATCTAGATTCGGATC+GGG - Chr1:39036514-39036533 MsG0180002490.01.T02:three_prime_UTR 45.0%
GGTGGTTTATGGGTGGTTTA+TGG - Chr1:39036550-39036569 MsG0180002490.01.T02:three_prime_UTR 45.0%
GTCTACTCATCCATACAGAC+AGG + Chr1:39041461-39041480 None:intergenic 45.0%
GTGGTTACGGATTTCGTTTC+AGG - Chr1:39037513-39037532 MsG0180002490.01.T02:CDS 45.0%
GTTACGGATTTCGTTTCAGG+TGG - Chr1:39037516-39037535 MsG0180002490.01.T02:CDS 45.0%
GTTCATCTTTAGGCTGAGGA+AGG + Chr1:39043447-39043466 None:intergenic 45.0%
GTTGAAGGTAGGTCTTAGGT+GGG - Chr1:39037602-39037621 MsG0180002490.01.T02:CDS 45.0%
GTTTAGGAGCTGATCTTGTG+AGG - Chr1:39039595-39039614 MsG0180002490.01.T01:intron 45.0%
TAAACCCAAGGCTTCTCTCA+CGG + Chr1:39037986-39038005 None:intergenic 45.0%
TAACATCAACCTGACGATGG+TGG + Chr1:39038091-39038110 None:intergenic 45.0%
TCTAGATTCGGATCGGGATT+TGG - Chr1:39036520-39036539 MsG0180002490.01.T02:three_prime_UTR 45.0%
TCTCGTAAGCGTGTACACTT+AGG - Chr1:39038418-39038437 MsG0180002490.01.T01:intron 45.0%
TGAGTTTGTGGGAAGAGCTT+GGG - Chr1:39039356-39039375 MsG0180002490.01.T01:intron 45.0%
TGCAGCTAGACATTAGCTCA+TGG + Chr1:39037201-39037220 None:intergenic 45.0%
TGGATCTCGTGGTGGTTTAT+GGG - Chr1:39036540-39036559 MsG0180002490.01.T02:three_prime_UTR 45.0%
TGTTGAAGGTAGGTCTTAGG+TGG - Chr1:39037601-39037620 MsG0180002490.01.T02:CDS 45.0%
TGTTTGGGTGCTTAGAGTGT+GGG - Chr1:39037051-39037070 MsG0180002490.01.T02:intron 45.0%
TTAACCATGGGGAGGTGAAA+GGG - Chr1:39037443-39037462 MsG0180002490.01.T02:CDS 45.0%
TTCGAGACGACGAAAAACCA+TGG + Chr1:39043764-39043783 None:intergenic 45.0%
TTGGAAAGCAGTCCGCTAAA+GGG - Chr1:39039409-39039428 MsG0180002490.01.T01:intron 45.0%
TTGGATCTCGTGGTGGTTTA+TGG - Chr1:39036539-39036558 MsG0180002490.01.T02:three_prime_UTR 45.0%
TTGGGTGTGGTTTAACCATG+GGG - Chr1:39037432-39037451 MsG0180002490.01.T02:CDS 45.0%
TTGGGTGTGTGATGAGATTG+TGG - Chr1:39036909-39036928 MsG0180002490.01.T02:intron 45.0%
TTGGTCAGAGTCTCCTGTAA+GGG - Chr1:39039773-39039792 MsG0180002490.01.T01:intron 45.0%
TTTAACCATGGGGAGGTGAA+AGG - Chr1:39037442-39037461 MsG0180002490.01.T02:CDS 45.0%
! AAGAAAGTGTACGGTAGCCA+TGG - Chr1:39042882-39042901 MsG0180002490.01.T01:intron 45.0%
! ATAAGTAGGGCGTTACACCT+TGG - Chr1:39041822-39041841 MsG0180002490.01.T01:CDS 45.0%
! CTGACAATGATGGAATGGAG+TGG - Chr1:39043789-39043808 MsG0180002490.01.T01:intron 45.0%
! CTGCTATCGTTTAGAGTCGT+AGG - Chr1:39041532-39041551 MsG0180002490.01.T01:CDS 45.0%
! CTTTGGAGGAGGGAAGAAAA+TGG + Chr1:39044506-39044525 None:intergenic 45.0%
! GAGTTGGTTGTTCTGTTCCT+CGG - Chr1:39039249-39039268 MsG0180002490.01.T01:intron 45.0%
! TAAGTAGGGCGTTACACCTT+GGG - Chr1:39041823-39041842 MsG0180002490.01.T01:CDS 45.0%
! TAGTTGCTTTGGTGAGTGCT+TGG - Chr1:39041493-39041512 MsG0180002490.01.T01:intron 45.0%
! TCAGCTAAGAAAGTGTACGG+TGG - Chr1:39038870-39038889 MsG0180002490.01.T01:intron 45.0%
! TGCCCTACTGTTTTGTGCTT+TGG - Chr1:39037143-39037162 MsG0180002490.01.T02:intron 45.0%
! TGGGTGGTTTATGGTAGTGA+TGG - Chr1:39036559-39036578 MsG0180002490.01.T02:three_prime_UTR 45.0%
! TTGGAGACAACTTTGAAGGC+TGG - Chr1:39043722-39043741 MsG0180002490.01.T01:intron 45.0%
!! AGGCATGGCTTTAAACTGTC+TGG - Chr1:39039488-39039507 MsG0180002490.01.T01:intron 45.0%
!! ATGGTGGATCGTACTATGCT+TGG - Chr1:39038895-39038914 MsG0180002490.01.T01:intron 45.0%
!! CATGGCTTTAAACTGTCTGG+AGG - Chr1:39039491-39039510 MsG0180002490.01.T01:intron 45.0%
!! GGTGTTGTTGATGGTTGTTG+TGG - Chr1:39036457-39036476 MsG0180002490.01.T02:three_prime_UTR 45.0%
!! GTTCAGGTTGTTGGTGTTGA+TGG - Chr1:39039702-39039721 MsG0180002490.01.T01:intron 45.0%
!! GTTGTTGATGGTTGTTGTGG+TGG - Chr1:39036460-39036479 MsG0180002490.01.T02:three_prime_UTR 45.0%
!! TTGGTTGGTGAGGTTGGTTT+AGG - Chr1:39039579-39039598 MsG0180002490.01.T01:intron 45.0%
!! TTTCGTGGTGGTGTTGTTGA+TGG - Chr1:39036448-39036467 MsG0180002490.01.T02:three_prime_UTR 45.0%
!!! ACAACGGTTTTGCTGTTTCG+AGG - Chr1:39042988-39043007 MsG0180002490.01.T01:intron 45.0%
!!! CGATTTTGGTGCTGTTGCTA+TGG - Chr1:39042833-39042852 MsG0180002490.01.T01:intron 45.0%
!!! GATGTGTTTTCGAGTGCATG+TGG + Chr1:39042762-39042781 None:intergenic 45.0%
!!! GTTTTCGAGTGCATGTGGTT+TGG + Chr1:39042757-39042776 None:intergenic 45.0%
!!! GTTTTTTCTTCGGTGGACGT+GGG - Chr1:39037370-39037389 MsG0180002490.01.T02:intron 45.0%
!!! TGTTTTTTCTTCGGTGGACG+TGG - Chr1:39037369-39037388 MsG0180002490.01.T02:intron 45.0%
!!! TTTTTTCTTCGGTGGACGTG+GGG - Chr1:39037371-39037390 MsG0180002490.01.T02:intron 45.0%
AAAGCAGCCTGCAGAACTGT+AGG + Chr1:39044430-39044449 None:intergenic 50.0%
AAAGTGTACGGTAGCCATGG+TGG - Chr1:39042885-39042904 MsG0180002490.01.T01:intron 50.0%
AGTCTCTGTTCGTCTTGAGC+AGG - Chr1:39037707-39037726 MsG0180002490.01.T02:CDS 50.0%
AGTTGTGTGGCAATGGAGGA+AGG + Chr1:39036752-39036771 None:intergenic 50.0%
ATCTCGTGGTGGTTTATGGG+TGG - Chr1:39036543-39036562 MsG0180002490.01.T02:three_prime_UTR 50.0%
ATGCTCCCTTGACGCAACAT+AGG + Chr1:39042942-39042961 None:intergenic 50.0%
CAACCTCACCAACCAAAGGA+AGG + Chr1:39039575-39039594 None:intergenic 50.0%
CAACGGGCAACAAGCAAATG+AGG - Chr1:39038183-39038202 MsG0180002490.01.T01:intron 50.0%
CAACGGGCAACAAGCAAATG+TGG - Chr1:39038183-39038202 MsG0180002490.01.T01:intron 50.0%
CATCCATACAGACAGGTAGG+CGG + Chr1:39041454-39041473 None:intergenic 50.0%
CCACCATGTCACAACACCAA+AGG + Chr1:39039211-39039230 None:intergenic 50.0%
CCTATCACCTACAGTTCTGC+AGG - Chr1:39044420-39044439 MsG0180002490.01.T01:intron 50.0%
CCTGCAGAACTGTAGGTGAT+AGG + Chr1:39044423-39044442 None:intergenic 50.0%
CCTGTAATTTGGGCGAGTTC+CGG + Chr1:39042270-39042289 None:intergenic 50.0%
CGCAACATAGGAAGCTCAGA+AGG + Chr1:39038924-39038943 None:intergenic 50.0%
CGGAACTCGCCCAAATTACA+GGG - Chr1:39042268-39042287 MsG0180002490.01.T01:CDS 50.0%
CGGAAGAGCTTCTCAACTTC+TGG + Chr1:39044463-39044482 None:intergenic 50.0%
CGTAGCTTAGCTCAGTTGGT+TGG - Chr1:39038466-39038485 MsG0180002490.01.T01:intron 50.0%
CTGAGTTTGTGGGAAGAGCT+TGG - Chr1:39039355-39039374 MsG0180002490.01.T01:intron 50.0%
CTTAGGGAATGGTTTCGTGG+TGG - Chr1:39036436-39036455 MsG0180002490.01.T02:three_prime_UTR 50.0%
GAAACAGGAAGTGGAGTTGC+TGG - Chr1:39039121-39039140 MsG0180002490.01.T01:intron 50.0%
GAACTCGCCCAAATTACAGG+GGG - Chr1:39042270-39042289 MsG0180002490.01.T01:CDS 50.0%
GAGCTTCCTATGTTGCGTCA+AGG - Chr1:39038927-39038946 MsG0180002490.01.T01:intron 50.0%
GATGCTTTAGCACTCCCCTT+TGG - Chr1:39039192-39039211 MsG0180002490.01.T01:intron 50.0%
GCAGTTGACATCATGGGTGA+CGG - Chr1:39040755-39040774 MsG0180002490.01.T01:intron 50.0%
GCTACCTGAATCAGAGGAGA+AGG - Chr1:39039150-39039169 MsG0180002490.01.T01:intron 50.0%
GCTTGAGGTGCAAGTAATGG+AGG - Chr1:39041299-39041318 MsG0180002490.01.T01:intron 50.0%
GGAACTCGCCCAAATTACAG+GGG - Chr1:39042269-39042288 MsG0180002490.01.T01:CDS 50.0%
GGGATTCTGCAGAACTGACA+CGG + Chr1:39039829-39039848 None:intergenic 50.0%
GGTCTTAGGGAATGGTTTCG+TGG - Chr1:39036433-39036452 MsG0180002490.01.T02:three_prime_UTR 50.0%
GGTTATGGTGTCTTCTTCGG+CGG - Chr1:39037233-39037252 MsG0180002490.01.T02:intron 50.0%
GTAGGCGGTCAAAACCACAT+GGG + Chr1:39041439-39041458 None:intergenic 50.0%
GTCTCTGTTCGTCTTGAGCA+GGG - Chr1:39037708-39037727 MsG0180002490.01.T02:CDS 50.0%
GTGGTTCGTGATCGTGATGT+TGG - Chr1:39036479-39036498 MsG0180002490.01.T02:three_prime_UTR 50.0%
GTGTTTGGGTGCTTAGAGTG+TGG - Chr1:39037050-39037069 MsG0180002490.01.T02:intron 50.0%
GTTGGAAAGCAGTCCGCTAA+AGG - Chr1:39039408-39039427 MsG0180002490.01.T01:intron 50.0%
GTTGGTCAGAGTCTCCTGTA+AGG - Chr1:39039772-39039791 MsG0180002490.01.T01:intron 50.0%
GTTTAGCCGGTGAAATGCCA+AGG - Chr1:39040047-39040066 MsG0180002490.01.T01:intron 50.0%
TACCGTCACCAACAACGTCT+AGG + Chr1:39040781-39040800 None:intergenic 50.0%
TGACGACGTCGATGTCATCT+TGG - Chr1:39038040-39038059 MsG0180002490.01.T01:CDS 50.0%
TGCTCAAGACGAACAGAGAC+TGG + Chr1:39037708-39037727 None:intergenic 50.0%
TGGATGAGTAGACGCTGTGT+AGG - Chr1:39041468-39041487 MsG0180002490.01.T01:intron 50.0%
TTGGAGTGAGTAGCAGCGAT+GGG - Chr1:39037491-39037510 MsG0180002490.01.T02:CDS 50.0%
! AAGAAAGTGTACGGTGGCCA+TGG - Chr1:39038876-39038895 MsG0180002490.01.T01:intron 50.0%
! AGAGAATCCAGGAGAGCACA+TGG + Chr1:39039634-39039653 None:intergenic 50.0%
! AGTGGGACTAGCGGTTAATG+CGG + Chr1:39042077-39042096 None:intergenic 50.0%
! ATGTTGCGTCAAGGGAGCAT+TGG - Chr1:39042942-39042961 MsG0180002490.01.T01:intron 50.0%
! GAACCTTCCTTTGGTTGGTG+AGG - Chr1:39039569-39039588 MsG0180002490.01.T01:intron 50.0%
! GCAAGTGGTTTGGCTGGTTA+TGG - Chr1:39037218-39037237 MsG0180002490.01.T02:intron 50.0%
! TCGGTGTCCACAACACCAAA+GGG + Chr1:39043217-39043236 None:intergenic 50.0%
! TGGAAGTTCTTCGGTGTGGA+AGG - Chr1:39044396-39044415 MsG0180002490.01.T01:intron 50.0%
! TTGGTGGTTGTGGGGTTCTT+GGG - Chr1:39037578-39037597 MsG0180002490.01.T02:CDS 50.0%
! TTTGGAGTGAGTAGCAGCGA+TGG - Chr1:39037490-39037509 MsG0180002490.01.T02:CDS 50.0%
! TTTGGTGGTTGTGGGGTTCT+TGG - Chr1:39037577-39037596 MsG0180002490.01.T02:CDS 50.0%
!! AAACTGTCTGGAGGCACCAT+TGG - Chr1:39039500-39039519 MsG0180002490.01.T01:intron 50.0%
!! AGAGAGGTAGTGGAAGTCGA+AGG - Chr1:39037395-39037414 MsG0180002490.01.T02:intron 50.0%
!! AGCGGACGTGTTCAAGTTGT+TGG - Chr1:39043680-39043699 MsG0180002490.01.T01:intron 50.0%
!! ATCAACCTGACGATGGTGGA+AGG + Chr1:39038087-39038106 None:intergenic 50.0%
!! CCTTTGGTGTTGTGACATGG+TGG - Chr1:39039208-39039227 MsG0180002490.01.T01:intron 50.0%
!! CTTCCTTTGGTTGGTGAGGT+TGG - Chr1:39039573-39039592 MsG0180002490.01.T01:intron 50.0%
!! CTTCGGCGGATTGAAGATGA+GGG - Chr1:39037247-39037266 MsG0180002490.01.T02:intron 50.0%
!! GGGTGTTGAAGGTAGGTCTT+AGG - Chr1:39037598-39037617 MsG0180002490.01.T02:CDS 50.0%
!! GGTTCTTGGGTGTTGAAGGT+AGG - Chr1:39037591-39037610 MsG0180002490.01.T02:CDS 50.0%
!! TCCCCTTTGGTGTTGTGACA+TGG - Chr1:39039205-39039224 MsG0180002490.01.T01:intron 50.0%
!! TCTTCGGCGGATTGAAGATG+AGG - Chr1:39037246-39037265 MsG0180002490.01.T02:intron 50.0%
!! TTCGGCGGATTGAAGATGAG+GGG - Chr1:39037248-39037267 MsG0180002490.01.T02:intron 50.0%
!!! ACAACGGTTTTGCTGTTCCG+AGG - Chr1:39038982-39039001 MsG0180002490.01.T01:intron 50.0%
!!! GGCGGTGAAATTGGTTTTGG+TGG - Chr1:39037562-39037581 MsG0180002490.01.T02:CDS 50.0%
!!! GTGCTTTTGAAGTATCGCCG+AGG + Chr1:39039269-39039288 None:intergenic 50.0%
AAAGTGTACGGTGGCCATGG+TGG - Chr1:39038879-39038898 MsG0180002490.01.T01:intron 55.0%
AAGGTCCGGGGTTCAAACTC+CGG - Chr1:39042414-39042433 MsG0180002490.01.T01:intron 55.0%
ACATCCCTTTCACCTCCCCA+TGG + Chr1:39037450-39037469 None:intergenic 55.0%
ACGGTCGTGTCATCCCTTAC+AGG + Chr1:39039789-39039808 None:intergenic 55.0%
CCGGAACTCGCCCAAATTAC+AGG - Chr1:39042267-39042286 MsG0180002490.01.T01:CDS 55.0%
CCTCCAAGTCCCTGTCAAGT+GGG + Chr1:39041628-39041647 None:intergenic 55.0%
CGGTGTCCACAACACCAAAG+GGG + Chr1:39043216-39043235 None:intergenic 55.0%
GGAAGATCCATGTGCTCTCC+TGG - Chr1:39039624-39039643 MsG0180002490.01.T01:intron 55.0%
GGATCGGGATTTGGATCTCG+TGG - Chr1:39036529-39036548 MsG0180002490.01.T02:three_prime_UTR 55.0%
GGTAGGCGGTCAAAACCACA+TGG + Chr1:39041440-39041459 None:intergenic 55.0%
GGTGTGGTTTAACCATGGGG+AGG - Chr1:39037435-39037454 MsG0180002490.01.T02:CDS 55.0%
GTAGCAGCGATGGGTGGTTA+CGG - Chr1:39037500-39037519 MsG0180002490.01.T02:CDS 55.0%
GTTGCCGTGAGAGAAGCCTT+GGG - Chr1:39037979-39037998 MsG0180002490.01.T01:CDS 55.0%
TCCTCCAAGTCCCTGTCAAG+TGG + Chr1:39041629-39041648 None:intergenic 55.0%
TCGGGATTTGGATCTCGTGG+TGG - Chr1:39036532-39036551 MsG0180002490.01.T02:three_prime_UTR 55.0%
TGACCGCCTACCTGTCTGTA+TGG - Chr1:39041448-39041467 MsG0180002490.01.T01:intron 55.0%
TGGCTGGAAGTTCTTCGGTG+TGG - Chr1:39044392-39044411 MsG0180002490.01.T01:intron 55.0%
TGTGGGAAGAGCTTGGGACT+TGG - Chr1:39039362-39039381 MsG0180002490.01.T01:intron 55.0%
TGTTGCCGTGAGAGAAGCCT+TGG - Chr1:39037978-39037997 MsG0180002490.01.T01:CDS 55.0%
TTGCCCACTTGACAGGGACT+TGG - Chr1:39041622-39041641 MsG0180002490.01.T01:CDS 55.0%
TTGGGTGCTTAGAGTGTGGG+TGG - Chr1:39037054-39037073 MsG0180002490.01.T02:intron 55.0%
! CTAGCTGCAAGTGGTTTGGC+TGG - Chr1:39037212-39037231 MsG0180002490.01.T02:intron 55.0%
! GGCCTAGACGTTGTTGGTGA+CGG - Chr1:39040776-39040795 MsG0180002490.01.T01:intron 55.0%
!! AGCACTCCCCTTTGGTGTTG+TGG - Chr1:39039200-39039219 MsG0180002490.01.T01:intron 55.0%
!! AGCGGACGTGTTCAGGTTGT+TGG - Chr1:39039693-39039712 MsG0180002490.01.T01:intron 55.0%
!! CTCGGTGTCCACAACACCAA+AGG + Chr1:39043218-39043237 None:intergenic 55.0%
!! GTGGGGTTCTTGGGTGTTGA+AGG - Chr1:39037587-39037606 MsG0180002490.01.T02:CDS 55.0%
!! TGGTGTTGTGGACACCGAGT+TGG - Chr1:39043219-39043238 MsG0180002490.01.T01:CDS 55.0%
ACTGACACGGTCGCGTCATC+AGG + Chr1:39039816-39039835 None:intergenic 60.0%
AGACGCCTTCCACCATCGTC+AGG - Chr1:39038079-39038098 MsG0180002490.01.T01:CDS 60.0%
AGTGGCCGGAGTTTGAACCC+CGG + Chr1:39042422-39042441 None:intergenic 60.0%
AGTGGCTGGGGTTTGAACCC+CGG + Chr1:39038515-39038534 None:intergenic 60.0%
CCCACTTGACAGGGACTTGG+AGG - Chr1:39041625-39041644 MsG0180002490.01.T01:CDS 60.0%
GACGTGGGGTAGAGAGGTAG+TGG - Chr1:39037385-39037404 MsG0180002490.01.T02:intron 60.0%
GAGTGAGTAGCAGCGATGGG+TGG - Chr1:39037494-39037513 MsG0180002490.01.T02:CDS 60.0%
GGTCGCGTCATCAGGACACA+CGG + Chr1:39039808-39039827 None:intergenic 60.0%
! GGTGACGGCCTAGACGTTGT+TGG - Chr1:39040770-39040789 MsG0180002490.01.T01:intron 60.0%
TAGGGGGAGCGGACGTGTTC+AGG - Chr1:39039686-39039705 MsG0180002490.01.T01:intron 65.0%
TCGGTGGACGTGGGGTAGAG+AGG - Chr1:39037379-39037398 MsG0180002490.01.T02:intron 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 39036431 39044805 39036431 ID=MsG0180002490.01;Name=MsG0180002490.01
Chr1 mRNA 39037714 39044805 39037714 ID=MsG0180002490.01.T01;Parent=MsG0180002490.01;Name=MsG0180002490.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|1|1|6|0|513
Chr1 exon 39044736 39044805 39044736 ID=MsG0180002490.01.T01:exon:12443;Parent=MsG0180002490.01.T01
Chr1 exon 39043141 39043350 39043141 ID=MsG0180002490.01.T01:exon:12444;Parent=MsG0180002490.01.T01
Chr1 exon 39042195 39042362 39042195 ID=MsG0180002490.01.T01:exon:12445;Parent=MsG0180002490.01.T01
Chr1 exon 39041513 39042049 39041513 ID=MsG0180002490.01.T01:exon:12446;Parent=MsG0180002490.01.T01
Chr1 exon 39038189 39038356 39038189 ID=MsG0180002490.01.T01:exon:12447;Parent=MsG0180002490.01.T01
Chr1 exon 39037714 39038102 39037714 ID=MsG0180002490.01.T01:exon:12448;Parent=MsG0180002490.01.T01
Chr1 CDS 39044736 39044805 39044736 ID=MsG0180002490.01.T01:cds;Parent=MsG0180002490.01.T01
Chr1 CDS 39043141 39043350 39043141 ID=MsG0180002490.01.T01:cds;Parent=MsG0180002490.01.T01
Chr1 CDS 39042195 39042362 39042195 ID=MsG0180002490.01.T01:cds;Parent=MsG0180002490.01.T01
Chr1 CDS 39041513 39042049 39041513 ID=MsG0180002490.01.T01:cds;Parent=MsG0180002490.01.T01
Chr1 CDS 39038189 39038356 39038189 ID=MsG0180002490.01.T01:cds;Parent=MsG0180002490.01.T01
Chr1 CDS 39037714 39038102 39037714 ID=MsG0180002490.01.T01:cds;Parent=MsG0180002490.01.T01
Chr1 mRNA 39036431 39037865 39036431 ID=MsG0180002490.01.T02;Parent=MsG0180002490.01;Name=MsG0180002490.01.T02;_AED=0.49;_eAED=0.49;_QI=138|1|1|1|0.5|0.33|3|249|159
Chr1 exon 39037402 39037865 39037402 ID=MsG0180002490.01.T02:exon:12449;Parent=MsG0180002490.01.T02
Chr1 exon 39036701 39036861 39036701 ID=MsG0180002490.01.T02:exon:12450;Parent=MsG0180002490.01.T02
Chr1 exon 39036431 39036672 39036431 ID=MsG0180002490.01.T02:exon:12451;Parent=MsG0180002490.01.T02
Chr1 five_prime_UTR 39037728 39037865 39037728 ID=MsG0180002490.01.T02:five_prime_utr;Parent=MsG0180002490.01.T02
Chr1 CDS 39037402 39037727 39037402 ID=MsG0180002490.01.T02:cds;Parent=MsG0180002490.01.T02
Chr1 CDS 39036708 39036861 39036708 ID=MsG0180002490.01.T02:cds;Parent=MsG0180002490.01.T02
Chr1 three_prime_UTR 39036701 39036707 39036701 ID=MsG0180002490.01.T02:three_prime_utr;Parent=MsG0180002490.01.T02
Chr1 three_prime_UTR 39036431 39036672 39036431 ID=MsG0180002490.01.T02:three_prime_utr;Parent=MsG0180002490.01.T02
Gene Sequence

>MsG0180002490.01.T02

ATGTTGATATTTAAAAATGGTGGAAGGGTTGTTGTCTTGAACACCAAGAACCTTCCTTTGGTTGGTGAGGTTGGTTTAGGAGCTGATCTTGTGAGGATTGATGGAAGATCCATGTGCTCTCCTGGATTCTCTTGTGATTCTGCTTTGCAGGTTACTTACATTGTTAGGGGGAGCGGACGTGTTCAAGTTGTTGGTGTTGATGGTAAGAGAGTCTTGGAGACAACTTTGAAGGCTGGAGATTTGTTCATTGTGCCATGGTTTTTCGTCGTCTCGAAGATTGCTGACAATGATGGAATGGAGTGGTTTTCTATCATCACTACCCCTAATCCTGTATTTACACACATGGCTGGAAGTTCTTCGGTGTGGAAGGCCCTATCACCTACAGTTCTGCAGGCTGCTTTCAATGTAGATCCAGAAGTTGAGAAGCTCTTCCGTTCAAAGAGGACTGCTGATGCCATTTTCTTCCCTCCTCCAAAGTAG

>MsG0180002490.01.T01

ATGGTCTTAGGGAATGGTTTCGTGGTGGTGTTGTTGATGGTTGTTGTGGTGGTTCGTGATCGTGATGTTGATGAGTTGAATAGAAAAAGTATTGGAATATGTATCCGTGATGATGAAGGTACCTTTGTTGGCTCAAACTATCCCGCTCTCTCCTGTGTATTTTGTTGCCGTGAGAGAAGCCTTGGGTTTATTCCATGCTTACAATGGCTAAGTGACATGCAATTTGACGACGTCGATGTCATCTTGGATTCAAAGATTACAATAGACGCCTTCCACCATCCTAAGAAAGTGTACGGTGGCCATGGTGGATCGTACTATGCTTGGTCACCTTCTGAGCTTCCTATGTTGCGTCAAGGGAACATTGGTGCTGCCAAGTTAGTTCTTCAGAACAACGGTTTTGCTGTTCCGAGGTATTCTGATTCTTCTAAGGTTGCTTATGTTCTTCAAGGAGGTGATGCTTTAGCACTCCCCTTTGGTGTTGTGACATGGTGGTACAACAAAGAGGACACTGAGTTGGTTGTTCTGTTCCTCGGCGATACTTCAAAAGCACACAAAGCTGGCGAGTTTACTGATTTTTTCCTGACTGGTCCTAATGGAATCTTTACTGGATTTTCAACTGAGTTTGTGGGAAGAGCTTGGGACTTGGACGAGAACAATGTGAAGACACTCGTTGGAAAGCAGTCCGCTAAAGGGATTGTGAAGCTTGACGGAAAAATCAGCCTTTCTCAGCCTAAAGATGAACACAGGAAAGGCATGGCTTTAAACTGTCTGGAGGCACCATTGGATGTTGATATTAAAAATGGTGGAAGGGTTGTTGTCATGAACACCAAGAACCTTCCTTTGGTTGGTGAGGTTGGTTTAGGAGCTGATCTTGTGAGGATTGATGGAAGATCCATGTGCTCTCCTGGATTCTCTTGTGATTCTGCTTTGCAGGTTACTTACATTGTTAGGGGGAGCGGACGTGTTCAGGTTGTTGGTGTTGATGCTAAGAAAGTGTACGGTAGCCATGGTGGATCGTACTATGCTTGGTCACCTTCTGAGCTTCCTATGTTGCGTCAAGGGAGCATTGGTGCTGCCAAGTTAGTTCTTCAGAACAACGGTTTTGCTGTTTCGAGGTATTCTGATTCTTCTAAGGTTGCTTATGTTCTTCAAGGAAGTGGAGTTGCTGGAATTGTGCTACCTGAATCAGAGGAGAAGGTTGTTGCAATTAAGGAGGGTGATGCTTTAGCACTCCCCTTTGGTGTTGTGGACACCGAGTTGGTTGTTCTGTTCCTCGGCGATACTTCAAAAGCACACAAAGCTGGCGAGTTTACTGATTTTTTCCTGACTGGTCCTAATGGAATCTTTACTGGATTTTCAACTGAGTTTGTGGGAAGAGCTTGGGACTTGGACGAGAACAATGTGAAGACACTCGTTGGAAAGCAGTCCGCTAAAGGGATTGTGAAGCTTGACGGAAAAATCAGCCTTCCTCAGCCTAAAGATGAACACAGGAAAGGCATGGCTTTAAACTGTCTGGAGGCACCATTGGATGTTGATATTTAA
Protein sequence

>MsG0180002490.01.T02

MLIFKNGGRVVVLNTKNLPLVGEVGLGADLVRIDGRSMCSPGFSCDSALQVTYIVRGSGRVQVVGVDGKRVLETTLKAGDLFIVPWFFVVSKIADNDGMEWFSIITTPNPVFTHMAGSSSVWKALSPTVLQAAFNVDPEVEKLFRSKRTADAIFFPPPK*

>MsG0180002490.01.T01

MVLGNGFVVVLLMVVVVVRDRDVDELNRKSIGICIRDDEGTFVGSNYPALSCVFCCRERSLGFIPCLQWLSDMQFDDVDVILDSKITIDAFHHPKKVYGGHGGSYYAWSPSELPMLRQGNIGAAKLVLQNNGFAVPRYSDSSKVAYVLQGGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAHKAGEFTDFFLTGPNGIFTGFSTEFVGRAWDLDENNVKTLVGKQSAKGIVKLDGKISLSQPKDEHRKGMALNCLEAPLDVDIKNGGRVVVMNTKNLPLVGEVGLGADLVRIDGRSMCSPGFSCDSALQVTYIVRGSGRVQVVGVDAKKVYGSHGGSYYAWSPSELPMLRQGSIGAAKLVLQNNGFAVSRYSDSSKVAYVLQGSGVAGIVLPESEEKVVAIKEGDALALPFGVVDTELVVLFLGDTSKAHKAGEFTDFFLTGPNGIFTGFSTEFVGRAWDLDENNVKTLVGKQSAKGIVKLDGKISLPQPKDEHRKGMALNCLEAPLDVDI*