AlfalfaGEDB | MsG0680031617.01

M. sativa cultivar ZhongmuNo.1 / MsG0680031617.01

KEGG: -
GO: GO:0008375 GO:0016020
PFAM: PF02485

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031617.01.T01	KEH25549.1	96.45	169	6	0	1	169	149	317	2.78E-116	342

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031617.01.T01	Q9LFQ0	53.254	169	76	1	1	169	269	434	5.29E-63	202

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031617.01.T01	A0A072U706	96.450	169	6	0	1	169	149	317	1.33e-116	342

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0680031617.01	0.827785	1.291033e-54	1.258951e-51
MsG0080047944.01	MsG0680031617.01	0.821396	4.129140e-53	3.355414e-50
MsG0080047957.01	MsG0680031617.01	0.808894	2.475129e-50	1.432149e-47
MsG0080047959.01	MsG0680031617.01	0.804035	2.620065e-49	1.337055e-46
MsG0080048404.01	MsG0680031617.01	0.815638	8.344801e-52	5.785271e-49
MsG0080048461.01	MsG0680031617.01	0.835596	1.530737e-56	1.880660e-53
MsG0080048462.01	MsG0680031617.01	0.830887	2.279205e-55	2.433364e-52
MsG0080048856.01	MsG0680031617.01	0.836870	7.261388e-57	9.271050e-54
MsG0080048874.01	MsG0680031617.01	0.813622	2.332404e-51	1.530777e-48
MsG0180000091.01	MsG0680031617.01	0.802700	4.953872e-49	2.442967e-46
MsG0180000145.01	MsG0680031617.01	0.828376	9.305268e-55	9.232590e-52
MsG0180000210.01	MsG0680031617.01	0.805660	1.198948e-49	6.379483e-47
MsG0180000334.01	MsG0680031617.01	0.852733	3.802325e-61	8.021490e-58
MsG0180000335.01	MsG0680031617.01	0.818826	1.600146e-52	1.210686e-49
MsG0180000470.01	MsG0680031617.01	0.872036	4.329813e-67	1.784680e-63
MsG0180001063.01	MsG0680031617.01	0.816992	4.153540e-52	2.988371e-49
MsG0180001186.01	MsG0680031617.01	0.807700	4.448068e-50	2.494359e-47
MsG0180001207.01	MsG0680031617.01	0.804535	2.061483e-49	1.065541e-46
MsG0180001342.01	MsG0680031617.01	0.808009	3.822077e-50	2.160832e-47
MsG0180001687.01	MsG0680031617.01	0.807682	4.486858e-50	2.514946e-47
MsG0180001892.01	MsG0680031617.01	0.855055	8.155284e-62	1.858931e-58
MsG0180001971.01	MsG0680031617.01	0.802255	6.118721e-49	2.983334e-46
MsG0180002259.01	MsG0680031617.01	0.824155	9.409476e-54	8.267517e-51
MsG0180002282.01	MsG0680031617.01	0.806218	9.150678e-50	4.939192e-47
MsG0180002377.01	MsG0680031617.01	0.810128	1.344229e-50	8.037228e-48
MsG0180002460.01	MsG0680031617.01	0.803136	4.026146e-49	2.007551e-46
MsG0180002490.01	MsG0680031617.01	0.808638	2.807354e-50	1.613491e-47
MsG0180002492.01	MsG0680031617.01	0.802245	6.147920e-49	2.996834e-46
MsG0180003403.01	MsG0680031617.01	0.828991	6.606070e-55	6.672334e-52
MsG0180003455.01	MsG0680031617.01	0.818685	1.722546e-52	1.298175e-49
MsG0180003669.01	MsG0680031617.01	0.814307	1.646796e-51	1.101138e-48
MsG0180003673.01	MsG0680031617.01	0.817327	3.492780e-52	2.535881e-49
MsG0180003686.01	MsG0680031617.01	0.820214	7.720650e-53	6.071123e-50
MsG0180003920.01	MsG0680031617.01	0.805459	1.321245e-49	6.994077e-47
MsG0180003943.01	MsG0680031617.01	0.803662	3.132985e-49	1.583419e-46
MsG0180003951.01	MsG0680031617.01	0.837100	6.341913e-57	8.152851e-54
MsG0180004249.01	MsG0680031617.01	0.816919	4.315112e-52	3.098090e-49
MsG0180004264.01	MsG0680031617.01	0.800768	1.234447e-48	5.796023e-46
MsG0180004331.01	MsG0680031617.01	0.816083	6.638480e-52	4.658718e-49
MsG0180004389.01	MsG0680031617.01	0.860686	1.736954e-63	4.789041e-60
MsG0180004465.01	MsG0680031617.01	0.824134	9.515319e-54	8.355454e-51
MsG0180004765.01	MsG0680031617.01	0.830050	3.653006e-55	3.805601e-52
MsG0180004928.01	MsG0680031617.01	0.801290	9.653234e-49	4.592946e-46
MsG0180005050.01	MsG0680031617.01	0.809613	1.735436e-50	1.023756e-47
MsG0180005185.01	MsG0680031617.01	0.804296	2.312985e-49	1.188228e-46
MsG0180005250.01	MsG0680031617.01	0.812228	4.712366e-51	2.979416e-48
MsG0180005265.01	MsG0680031617.01	0.803847	2.867736e-49	1.456391e-46
MsG0180005393.01	MsG0680031617.01	0.812693	3.728537e-51	2.386694e-48
MsG0180005400.01	MsG0680031617.01	0.807786	4.263737e-50	2.396439e-47
MsG0180005480.01	MsG0680031617.01	0.831358	1.746650e-55	1.890936e-52
MsG0180005575.01	MsG0680031617.01	0.832299	1.023506e-55	1.139138e-52
MsG0180005954.01	MsG0680031617.01	0.812462	4.188397e-51	2.664920e-48
MsG0180006024.01	MsG0680031617.01	0.815238	1.024260e-51	7.022636e-49
MsG0180006224.01	MsG0680031617.01	0.822682	2.078786e-53	1.752141e-50
MsG0180006257.01	MsG0680031617.01	0.825116	5.584947e-54	5.044295e-51
MsG0280006299.01	MsG0680031617.01	0.857770	1.301509e-62	3.248003e-59
MsG0280006324.01	MsG0680031617.01	0.847425	1.165827e-59	2.071394e-56
MsG0280006405.01	MsG0680031617.01	0.815983	6.990850e-52	4.892291e-49
MsG0280010698.01	MsG0680031617.01	0.834587	2.750255e-56	3.278454e-53
MsG0280010722.01	MsG0680031617.01	0.811524	6.707460e-51	4.161483e-48
MsG0280010736.01	MsG0680031617.01	0.824100	9.690385e-54	8.500814e-51
MsG0280010778.01	MsG0680031617.01	0.831356	1.748350e-55	1.892698e-52
MsG0280010788.01	MsG0680031617.01	0.831634	1.493311e-55	1.629970e-52
MsG0280010796.01	MsG0680031617.01	0.808949	2.408729e-50	1.395812e-47
MsG0280010807.01	MsG0680031617.01	0.812723	3.672115e-51	2.352473e-48
MsG0280010992.01	MsG0680031617.01	0.849776	2.601566e-60	4.986442e-57
MsG0280011014.01	MsG0680031617.01	0.807579	4.717325e-50	2.637003e-47
MsG0280011101.01	MsG0680031617.01	0.830993	2.147344e-55	2.299724e-52
MsG0280011156.01	MsG0680031617.01	0.838588	2.630553e-57	3.539662e-54
MsG0280011282.01	MsG0680031617.01	0.804169	2.458033e-49	1.258620e-46
MsG0280011305.01	MsG0680031617.01	0.831688	1.448202e-55	1.583341e-52
MsG0280011329.01	MsG0680031617.01	0.806429	8.260206e-50	4.482458e-47
MsG0280011339.01	MsG0680031617.01	0.814884	1.226952e-51	8.332095e-49
MsG0280011388.01	MsG0680031617.01	0.808996	2.353049e-50	1.365295e-47
MsG0380011494.01	MsG0680031617.01	0.801306	9.580877e-49	4.560347e-46
MsG0380011501.01	MsG0680031617.01	0.806979	6.323272e-50	3.480160e-47
MsG0380011609.01	MsG0680031617.01	0.858167	9.922682e-63	2.509537e-59
MsG0380011755.01	MsG0680031617.01	0.820246	7.590481e-53	5.974065e-50
MsG0380012009.01	MsG0680031617.01	0.805435	1.336971e-49	7.072672e-47
MsG0380012067.01	MsG0680031617.01	0.802715	4.917788e-49	2.426143e-46
MsG0380012460.01	MsG0680031617.01	0.827884	1.222394e-54	1.195524e-51
MsG0380013176.01	MsG0680031617.01	0.806841	6.760926e-50	3.707935e-47
MsG0380013178.01	MsG0680031617.01	0.810493	1.121649e-50	6.770884e-48
MsG0380013183.01	MsG0680031617.01	0.827353	1.639854e-54	1.579396e-51
MsG0380013404.01	MsG0680031617.01	0.802328	5.909242e-49	2.886719e-46
MsG0380013475.01	MsG0680031617.01	0.839260	1.762920e-57	2.421165e-54
MsG0380013834.01	MsG0680031617.01	0.822746	2.008419e-53	1.695973e-50
MsG0380014097.01	MsG0680031617.01	0.819386	1.193494e-52	9.170378e-50
MsG0380014173.01	MsG0680031617.01	0.824450	8.019674e-54	7.105391e-51
MsG0380014495.01	MsG0680031617.01	0.840596	7.903769e-58	1.131314e-54
MsG0380014537.01	MsG0680031617.01	0.846969	1.555188e-59	2.722987e-56
MsG0380014573.01	MsG0680031617.01	0.806117	9.611047e-50	5.174190e-47
MsG0380014701.01	MsG0680031617.01	0.846377	2.256097e-59	3.875697e-56
MsG0680030880.01	MsG0680031617.01	0.832780	7.776296e-56	8.780869e-53
MsG0680030881.01	MsG0680031617.01	0.843756	1.152191e-58	1.820778e-55
MsG0680030882.01	MsG0680031617.01	0.840142	1.038846e-57	1.466391e-54
MsG0680030918.01	MsG0680031617.01	0.802219	6.224795e-49	3.032180e-46
MsG0680031344.01	MsG0680031617.01	0.801610	8.300070e-49	3.980974e-46
MsG0680031431.01	MsG0680031617.01	0.800090	1.696197e-48	7.828580e-46
MsG0680031506.01	MsG0680031617.01	0.817136	3.857002e-52	2.785721e-49
MsG0680031617.01	MsG0680031618.01	0.896756	2.716527e-76	2.978997e-72
MsG0680031617.01	MsG0680031621.01	0.801690	7.993233e-49	3.841559e-46
MsG0680031617.01	MsG0680031708.01	0.811914	5.517190e-51	3.458268e-48
MsG0680031617.01	MsG0680032157.01	0.809437	1.892676e-50	1.111235e-47
MsG0680031617.01	MsG0680032771.01	0.830677	2.566550e-55	2.723213e-52
MsG0680031617.01	MsG0680033928.01	0.810922	9.060570e-51	5.532957e-48
MsG0680031617.01	MsG0680034230.01	0.816150	6.415180e-52	4.510108e-49
MsG0680031617.01	MsG0680034234.01	0.803407	3.537171e-49	1.776101e-46
MsG0680031617.01	MsG0680034320.01	0.801483	8.816831e-49	4.215380e-46
MsG0680031617.01	MsG0680034422.01	0.811477	6.864067e-51	4.253471e-48
MsG0680031617.01	MsG0680034464.01	0.828930	6.835644e-55	6.891913e-52
MsG0680031617.01	MsG0680034739.01	0.819498	1.125364e-52	8.674750e-50
MsG0680031617.01	MsG0680034853.01	0.816360	5.756009e-52	4.070034e-49
MsG0680031617.01	MsG0680034918.01	0.825635	4.210058e-54	3.859014e-51
MsG0680031617.01	MsG0680035123.01	0.804973	1.670504e-49	8.733123e-47
MsG0680031617.01	MsG0680035346.01	0.834617	2.701656e-56	3.223353e-53
MsG0680031617.01	MsG0680035475.01	0.848833	4.764088e-60	8.855914e-57
MsG0680031617.01	MsG0680035573.01	0.818601	1.800180e-52	1.353529e-49
MsG0680031617.01	MsG0680035660.01	0.802718	4.911494e-49	2.423186e-46
MsG0680031617.01	MsG0680035692.01	0.837071	6.451407e-57	8.286184e-54
MsG0680031617.01	MsG0680035876.01	0.808240	3.413636e-50	1.941767e-47
MsG0680031617.01	MsG0780036018.01	0.804567	2.030225e-49	1.050263e-46
MsG0680031617.01	MsG0780036147.01	0.813052	3.111439e-51	2.010606e-48
MsG0680031617.01	MsG0780036340.01	0.831728	1.416126e-55	1.550256e-52
MsG0680031617.01	MsG0780036477.01	0.825214	5.296918e-54	4.797553e-51
MsG0680031617.01	MsG0780036593.01	0.827833	1.257568e-54	1.228028e-51
MsG0680031617.01	MsG0780036602.01	0.814358	1.604751e-51	1.074421e-48
MsG0680031617.01	MsG0780036719.01	0.818116	2.318263e-52	1.719965e-49
MsG0680031617.01	MsG0780036815.01	0.813578	2.383999e-51	1.562816e-48
MsG0680031617.01	MsG0780037054.01	0.849993	2.263095e-60	4.368744e-57
MsG0680031617.01	MsG0780037141.01	0.834848	2.364590e-56	2.840642e-53
MsG0680031617.01	MsG0780037146.01	0.822503	2.288414e-53	1.918987e-50
MsG0680031617.01	MsG0780037457.01	0.800634	1.314830e-48	6.152682e-46
MsG0680031617.01	MsG0780037460.01	0.802068	6.685350e-49	3.244115e-46
MsG0680031617.01	MsG0780037918.01	0.810772	9.760698e-51	5.936486e-48
MsG0680031617.01	MsG0780037942.01	0.805577	1.248227e-49	6.627318e-47
MsG0680031617.01	MsG0780038377.01	0.810238	1.273238e-50	7.634505e-48
MsG0680031617.01	MsG0780038386.01	0.831765	1.386755e-55	1.519738e-52
MsG0680031617.01	MsG0780038401.01	0.810651	1.036630e-50	6.284415e-48
MsG0680031617.01	MsG0780038424.01	0.821850	3.241836e-53	2.668435e-50
MsG0680031617.01	MsG0780038439.01	0.845753	3.335897e-59	5.616816e-56
MsG0680031617.01	MsG0780038602.01	0.821945	3.082109e-53	2.543606e-50
MsG0680031617.01	MsG0780038603.01	0.851705	7.457143e-61	1.522307e-57
MsG0680031617.01	MsG0780038691.01	0.820756	5.796898e-53	4.627468e-50
MsG0680031617.01	MsG0780039059.01	0.811535	6.669629e-51	4.139236e-48
MsG0680031617.01	MsG0780039063.01	0.812903	3.354015e-51	2.158840e-48
MsG0680031617.01	MsG0780039139.01	0.805397	1.361618e-49	7.195989e-47
MsG0680031617.01	MsG0780039170.01	0.847166	1.372896e-59	2.419187e-56
MsG0680031617.01	MsG0780039178.01	0.824376	8.346268e-54	7.379470e-51
MsG0680031617.01	MsG0780039243.01	0.827478	1.530094e-54	1.478937e-51
MsG0680031617.01	MsG0780039252.01	0.821009	5.069690e-53	4.076058e-50
MsG0680031617.01	MsG0780039257.01	0.802961	4.375589e-49	2.172105e-46
MsG0680031617.01	MsG0780039423.01	0.827320	1.669492e-54	1.606380e-51
MsG0680031617.01	MsG0780039443.01	0.857194	1.927164e-62	4.717634e-59
MsG0680031617.01	MsG0780039520.01	0.834215	3.409604e-56	4.018994e-53
MsG0680031617.01	MsG0780039522.01	0.805127	1.551065e-49	8.140804e-47
MsG0680031617.01	MsG0780039808.01	0.809785	1.593469e-50	9.442776e-48
MsG0680031617.01	MsG0780039866.01	0.822322	2.519764e-53	2.102159e-50
MsG0680031617.01	MsG0780039867.01	-0.808183	3.510905e-50	1.994096e-47
MsG0680031617.01	MsG0780040057.01	0.841714	4.018330e-58	5.954763e-55
MsG0680031617.01	MsG0780040074.01	0.807965	3.906146e-50	2.205723e-47
MsG0680031617.01	MsG0780040261.01	0.815040	1.133154e-51	7.728003e-49
MsG0680031617.01	MsG0780040576.01	-0.821121	4.778977e-53	3.853882e-50
MsG0680031617.01	MsG0780040669.01	0.816712	4.800035e-52	3.426805e-49
MsG0680031617.01	MsG0780040704.01	0.818235	2.178970e-52	1.621814e-49
MsG0680031617.01	MsG0780040888.01	0.813319	2.718175e-51	1.769345e-48
MsG0680031617.01	MsG0780041016.01	0.808631	2.817055e-50	1.618775e-47
MsG0680031617.01	MsG0780041229.01	0.810075	1.380472e-50	8.242425e-48
MsG0680031617.01	MsG0780041416.01	0.819861	9.299749e-53	7.241505e-50
MsG0680031617.01	MsG0780041456.01	0.807591	4.689529e-50	2.622276e-47
MsG0680031617.01	MsG0780041662.01	0.810808	9.585930e-51	5.835742e-48
MsG0680031617.01	MsG0780041699.01	0.803738	3.021139e-49	1.529953e-46
MsG0680031617.01	MsG0880041836.01	0.819983	8.721137e-53	6.814337e-50
MsG0680031617.01	MsG0880041861.01	0.816152	6.408527e-52	4.505692e-49
MsG0680031617.01	MsG0880041863.01	0.846337	2.314209e-59	3.970008e-56
MsG0680031617.01	MsG0880041986.01	0.829953	3.858055e-55	4.008130e-52
MsG0680031617.01	MsG0880042031.01	0.803485	3.409236e-49	1.715312e-46
MsG0680031617.01	MsG0880042380.01	0.800794	1.219302e-48	5.728749e-46
MsG0680031617.01	MsG0880042412.01	0.803651	3.148223e-49	1.590716e-46
MsG0680031617.01	MsG0880042518.01	0.822323	2.518907e-53	2.101467e-50
MsG0680031617.01	MsG0880042520.01	0.827441	1.561600e-54	1.507816e-51
MsG0680031617.01	MsG0880042698.01	0.832325	1.008116e-55	1.122894e-52
MsG0680031617.01	MsG0880043157.01	0.839164	1.866354e-57	2.555692e-54
MsG0680031617.01	MsG0880043479.01	0.818326	2.078421e-52	1.550941e-49
MsG0680031617.01	MsG0880043480.01	0.810768	9.778925e-51	5.946944e-48
MsG0680031617.01	MsG0880043521.01	0.832355	9.913359e-56	1.105290e-52
MsG0680031617.01	MsG0880043937.01	0.836809	7.529435e-57	9.595205e-54
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MsG0280010350.01	MsG0680031617.01	0.824088	9.751978e-54	8.552147e-51
MsG0280010366.01	MsG0680031617.01	0.827185	1.798896e-54	1.723957e-51
MsG0280010443.01	MsG0680031617.01	0.837511	4.978433e-57	6.481944e-54
MsG0280010489.01	MsG0680031617.01	0.824916	6.227970e-54	5.593339e-51
MsG0280010491.01	MsG0680031617.01	0.815709	8.046916e-52	5.589510e-49
MsG0280010533.01	MsG0680031617.01	0.806496	7.998833e-50	4.347907e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031617.01.T01	MTR_6g027550	96.450	169	6	0	1	169	149	317	3.37e-120	342
MsG0680031617.01.T01	MTR_7g086720	75.148	169	39	1	1	169	234	399	1.69e-92	275
MsG0680031617.01.T01	MTR_6g011080	51.190	168	79	1	1	168	268	432	2.59e-59	190
MsG0680031617.01.T01	MTR_0072s0020	52.663	169	73	4	1	168	270	432	3.76e-57	185
MsG0680031617.01.T01	MTR_4g022240	51.765	170	77	2	1	169	254	419	5.04e-57	184
MsG0680031617.01.T01	MTR_0662s0030	62.185	119	45	0	1	119	157	275	1.59e-51	166
MsG0680031617.01.T01	MTR_4g114140	62.185	119	45	0	1	119	256	374	1.03e-50	167
MsG0680031617.01.T01	MTR_2g085300	44.970	169	85	2	1	169	264	424	8.92e-50	166
MsG0680031617.01.T01	MTR_1g108280	43.023	172	88	3	2	169	232	397	1.70e-41	143
MsG0680031617.01.T01	MTR_4g008010	37.870	169	102	2	1	169	242	407	4.02e-33	121
MsG0680031617.01.T01	MTR_1g046740	38.690	168	97	2	1	168	277	438	4.51e-33	122

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031617.01.T01	AT5G15050	53.254	169	76	1	1	169	269	434	5.39e-64	202
MsG0680031617.01.T01	AT5G39990	51.786	168	78	1	2	169	283	447	1.44e-62	199
MsG0680031617.01.T01	AT1G03520	55.621	169	68	4	1	168	195	357	6.58e-61	192
MsG0680031617.01.T01	AT1G03520	55.621	169	68	4	1	168	284	446	3.21e-60	193
MsG0680031617.01.T01	AT3G03690	76.147	109	26	0	1	109	234	342	8.41e-58	185
MsG0680031617.01.T01	AT4G03340	53.846	169	71	4	1	168	262	424	9.09e-58	186
MsG0680031617.01.T01	AT4G27480	49.112	169	78	2	1	169	261	421	1.01e-57	186
MsG0680031617.01.T01	AT4G27480	49.112	169	78	2	1	169	261	421	1.01e-57	186
MsG0680031617.01.T01	AT4G27480	49.112	169	78	2	1	169	261	421	1.01e-57	186
MsG0680031617.01.T01	AT4G03340	53.846	169	71	4	1	168	285	447	1.46e-57	186
MsG0680031617.01.T01	AT3G15350	49.412	170	76	3	2	169	263	424	7.47e-56	181
MsG0680031617.01.T01	AT3G15350	49.412	170	76	3	2	169	263	424	7.47e-56	181
MsG0680031617.01.T01	AT1G53100	50.595	168	74	3	2	168	263	422	1.14e-54	178
MsG0680031617.01.T01	AT1G53100	51.899	158	67	3	2	158	263	412	7.43e-52	171
MsG0680031617.01.T01	AT1G71070	44.379	169	91	1	1	169	230	395	3.39e-48	160
MsG0680031617.01.T01	AT2G37585	45.238	168	70	3	2	169	239	384	1.18e-46	156
MsG0680031617.01.T01	AT3G24040	37.500	168	102	2	1	168	250	414	7.95e-32	118

Find 26 sgRNAs with CRISPR-Local

Find 37 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTCAAAGATTATAGGAAAA+TGG	0.261335	6:-23393329	MsG0680031617.01.T01:CDS
TCTTTGAGTGTTAGAGATCT+TGG	0.314388	6:+23393343	None:intergenic
CTCTAACACTCAAAGATTAT+AGG	0.319984	6:-23393336	MsG0680031617.01.T01:CDS
AGAGATCTTGGATGTTGTTT+TGG	0.322287	6:+23393355	None:intergenic
TTCTTAAACTTTCTAGCAAA+TGG	0.368091	6:+23393292	None:intergenic
ACTGTTTGGAAATACCCTTC+TGG	0.369138	6:+23393451	None:intergenic
GGTTTGAAAATTGAGAATTA+TGG	0.380635	6:-23393151	MsG0680031617.01.T01:CDS
TAGAATTGCATATAACTGTT+TGG	0.386470	6:+23393437	None:intergenic
TTTCTGAGTATTGTATTCTT+GGG	0.387883	6:-23393528	MsG0680031617.01.T01:CDS
ATGATCTACACTACATTACT+TGG	0.419908	6:-23393387	MsG0680031617.01.T01:CDS
CTGAGTATTGTATTCTTGGG+TGG	0.442957	6:-23393525	MsG0680031617.01.T01:CDS
TGGTGTTCTTAAGCCAAGTC+TGG	0.446844	6:-23393131	MsG0680031617.01.T01:CDS
ACACAAAATTTGTGTAGTAT+AGG	0.472913	6:+23393479	None:intergenic
TGAGTATTGTATTCTTGGGT+GGG	0.475364	6:-23393524	MsG0680031617.01.T01:CDS
CTATGCTTTCCACCTTGTGA+TGG	0.509851	6:+23393184	None:intergenic
CAAAATTTGTGTAGTATAGG+AGG	0.535652	6:+23393482	None:intergenic
TAGTATAGGAGGAGGATCCT+TGG	0.550571	6:+23393493	None:intergenic
TAAACTTTCTAGCAAATGGA+CGG	0.567234	6:+23393296	None:intergenic
TGATCTACACTACATTACTT+GGG	0.594137	6:-23393386	MsG0680031617.01.T01:CDS
AATTTGTGTAGTATAGGAGG+AGG	0.604508	6:+23393485	None:intergenic
GTGTAGATCATTGTTAGCTG+TGG	0.612568	6:+23393399	None:intergenic
ATTTACGCAAACAACAATGT+CGG	0.619006	6:-23393060	MsG0680031617.01.T01:CDS
TTGGGTGGGAAAATTTACCA+AGG	0.657816	6:-23393510	MsG0680031617.01.T01:CDS
GGAAAGCATAGAGCATGTCA+TGG	0.659761	6:-23393172	MsG0680031617.01.T01:CDS
TGGTGTTCATCACCATCACA+AGG	0.691054	6:-23393196	MsG0680031617.01.T01:CDS
TGTTCATCACCATCACAAGG+TGG	0.742385	6:-23393193	MsG0680031617.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CATATTTTTCATCTTTTTTG+AGG	+	Chr6:23393496-23393515	None:intergenic	20.0%
!	ACACAAAATTTGTGTAGTAT+AGG	+	Chr6:23393125-23393144	None:intergenic	25.0%
!	ACTCAAAGATTATAGGAAAA+TGG	-	Chr6:23393272-23393291	MsG0680031617.01.T01:CDS	25.0%
!	GGTTTGAAAATTGAGAATTA+TGG	-	Chr6:23393450-23393469	MsG0680031617.01.T01:CDS	25.0%
!	TAGAATTGCATATAACTGTT+TGG	+	Chr6:23393167-23393186	None:intergenic	25.0%
!!	TTCTTAAACTTTCTAGCAAA+TGG	+	Chr6:23393312-23393331	None:intergenic	25.0%
!!	TTTCTGAGTATTGTATTCTT+GGG	-	Chr6:23393073-23393092	MsG0680031617.01.T01:CDS	25.0%
!!!	TTTTCTGAGTATTGTATTCT+TGG	-	Chr6:23393072-23393091	MsG0680031617.01.T01:CDS	25.0%
	ATGATCTACACTACATTACT+TGG	-	Chr6:23393214-23393233	MsG0680031617.01.T01:CDS	30.0%
	ATTTACGCAAACAACAATGT+CGG	-	Chr6:23393541-23393560	MsG0680031617.01.T01:CDS	30.0%
	CAAAATTTGTGTAGTATAGG+AGG	+	Chr6:23393122-23393141	None:intergenic	30.0%
	CTCTAACACTCAAAGATTAT+AGG	-	Chr6:23393265-23393284	MsG0680031617.01.T01:CDS	30.0%
	TGATCTACACTACATTACTT+GGG	-	Chr6:23393215-23393234	MsG0680031617.01.T01:CDS	30.0%
!	AAATTGATAGAGAGCTTTTG+AGG	-	Chr6:23393352-23393371	MsG0680031617.01.T01:CDS	30.0%
!	AATCGTGGACAATTTTCTTT+TGG	-	Chr6:23393378-23393397	MsG0680031617.01.T01:CDS	30.0%
!	TAAACTTTCTAGCAAATGGA+CGG	+	Chr6:23393308-23393327	None:intergenic	30.0%
	AATTTGTGTAGTATAGGAGG+AGG	+	Chr6:23393119-23393138	None:intergenic	35.0%
	TCTTTGAGTGTTAGAGATCT+TGG	+	Chr6:23393261-23393280	None:intergenic	35.0%
!	AATTTTGTGTCATCTCCAGA+AGG	-	Chr6:23393135-23393154	MsG0680031617.01.T01:CDS	35.0%
!	ATTTTGTGTCATCTCCAGAA+GGG	-	Chr6:23393136-23393155	MsG0680031617.01.T01:CDS	35.0%
!	TGAGTATTGTATTCTTGGGT+GGG	-	Chr6:23393077-23393096	MsG0680031617.01.T01:CDS	35.0%
!!	AGAGATCTTGGATGTTGTTT+TGG	+	Chr6:23393249-23393268	None:intergenic	35.0%
!!	GACAATTTTCTTTTGGAGGA+TGG	-	Chr6:23393385-23393404	MsG0680031617.01.T01:CDS	35.0%
	ACTGTTTGGAAATACCCTTC+TGG	+	Chr6:23393153-23393172	None:intergenic	40.0%
	GTGTAGATCATTGTTAGCTG+TGG	+	Chr6:23393205-23393224	None:intergenic	40.0%
	TTGGGTGGGAAAATTTACCA+AGG	-	Chr6:23393091-23393110	MsG0680031617.01.T01:CDS	40.0%
!	CGTGGACAATTTTCTTTTGG+AGG	-	Chr6:23393381-23393400	MsG0680031617.01.T01:CDS	40.0%
!	CTGAGTATTGTATTCTTGGG+TGG	-	Chr6:23393076-23393095	MsG0680031617.01.T01:CDS	40.0%
!!!	ATCTTTTTTGAGGCCAGACT+TGG	+	Chr6:23393486-23393505	None:intergenic	40.0%
!!!	GATCTTGGATGTTGTTTTGG+AGG	+	Chr6:23393246-23393265	None:intergenic	40.0%
	CTATGCTTTCCACCTTGTGA+TGG	+	Chr6:23393420-23393439	None:intergenic	45.0%
	TAGTATAGGAGGAGGATCCT+TGG	+	Chr6:23393111-23393130	None:intergenic	45.0%
	TGGTGTTCATCACCATCACA+AGG	-	Chr6:23393405-23393424	MsG0680031617.01.T01:CDS	45.0%
	TGGTGTTCTTAAGCCAAGTC+TGG	-	Chr6:23393470-23393489	MsG0680031617.01.T01:CDS	45.0%
	TGTTCATCACCATCACAAGG+TGG	-	Chr6:23393408-23393427	MsG0680031617.01.T01:CDS	45.0%
!	GGAAAGCATAGAGCATGTCA+TGG	-	Chr6:23393429-23393448	MsG0680031617.01.T01:CDS	45.0%
!!	GAGCTTTTGAGGAGAAATCG+TGG	-	Chr6:23393363-23393382	MsG0680031617.01.T01:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	23393057	23393566	23393057	ID=MsG0680031617.01;Name=MsG0680031617.01
Chr6	mRNA	23393057	23393566	23393057	ID=MsG0680031617.01.T01;Parent=MsG0680031617.01;Name=MsG0680031617.01.T01;_AED=0.46;_eAED=0.46;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|169
Chr6	exon	23393057	23393566	23393057	ID=MsG0680031617.01.T01:exon:14586;Parent=MsG0680031617.01.T01
Chr6	CDS	23393057	23393566	23393057	ID=MsG0680031617.01.T01:cds;Parent=MsG0680031617.01.T01

Gene Sequence

>MsG0680031617.01.T01

ATGCTATCAAGATCTTTTTCTGAGTATTGTATTCTTGGGTGGGAAAATTTACCAAGGATCCTCCTCCTATACTACACAAATTTTGTGTCATCTCCAGAAGGGTATTTCCAAACAGTTATATGCAATTCTAAAGACTACAAGAACACCACAGCTAACAATGATCTACACTACATTACTTGGGATAATCCTCCAAAACAACATCCAAGATCTCTAACACTCAAAGATTATAGGAAAATGGTTTTGAGCAACCGTCCATTTGCTAGAAAGTTTAAGAAAAATGATATTGTGCTTGATAAAATTGATAGAGAGCTTTTGAGGAGAAATCGTGGACAATTTTCTTTTGGAGGATGGTGTTCATCACCATCACAAGGTGGAAAGCATAGAGCATGTCATGGTTTGAAAATTGAGAATTATGGTGTTCTTAAGCCAAGTCTGGCCTCAAAAAAGATGAAAAATATGCTTTCAAATATTATTTCGTTTAAAAATTTACGCAAACAACAATGTCGGTAA

Protein sequence

>MsG0680031617.01.T01

MLSRSFSEYCILGWENLPRILLLYYTNFVSSPEGYFQTVICNSKDYKNTTANNDLHYITWDNPPKQHPRSLTLKDYRKMVLSNRPFARKFKKNDIVLDKIDRELLRRNRGQFSFGGWCSSPSQGGKHRACHGLKIENYGVLKPSLASKKMKNMLSNIISFKNLRKQQCR*