Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019442.01.T01 | XP_039689732.1 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019442.01.T01 | Q6K508 | 24.94 | 417 | 236 | 9 | 11 | 354 | 50 | 462 | 5.61E-38 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019442.01.T01 | A0A072UK26 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048461.01 | MsG0480019442.01 | 0.829367 | 5.354726e-55 | 5.469655e-52 |
| MsG0080048462.01 | MsG0480019442.01 | 0.825893 | 3.656470e-54 | 3.376467e-51 |
| MsG0080048672.01 | MsG0480019442.01 | 0.816514 | 5.318597e-52 | 3.776395e-49 |
| MsG0080048769.01 | MsG0480019442.01 | 0.804103 | 2.536522e-49 | 1.296644e-46 |
| MsG0080048856.01 | MsG0480019442.01 | 0.801008 | 1.102798e-48 | 5.210082e-46 |
| MsG0080048928.01 | MsG0480019442.01 | 0.800371 | 1.487029e-48 | 6.912556e-46 |
| MsG0180000091.01 | MsG0480019442.01 | 0.839826 | 1.255933e-57 | 1.755299e-54 |
| MsG0180000145.01 | MsG0480019442.01 | 0.818675 | 1.732110e-52 | 1.305043e-49 |
| MsG0180000195.01 | MsG0480019442.01 | 0.810437 | 1.153326e-50 | 6.951604e-48 |
| MsG0180000332.01 | MsG0480019442.01 | 0.813779 | 2.153659e-51 | 1.419453e-48 |
| MsG0180000402.01 | MsG0480019442.01 | 0.807568 | 4.744211e-50 | 2.651300e-47 |
| MsG0180000470.01 | MsG0480019442.01 | 0.816922 | 4.306509e-52 | 3.092289e-49 |
| MsG0180000702.01 | MsG0480019442.01 | 0.809084 | 2.252967e-50 | 1.310371e-47 |
| MsG0180000703.01 | MsG0480019442.01 | 0.813361 | 2.660672e-51 | 1.733993e-48 |
| MsG0180000787.01 | MsG0480019442.01 | 0.805098 | 1.572751e-49 | 8.248291e-47 |
| MsG0180001173.01 | MsG0480019442.01 | 0.815057 | 1.123554e-51 | 7.665690e-49 |
| MsG0180001892.01 | MsG0480019442.01 | 0.802546 | 5.329374e-49 | 2.617780e-46 |
| MsG0180002071.01 | MsG0480019442.01 | 0.808012 | 3.816216e-50 | 2.157694e-47 |
| MsG0180002490.01 | MsG0480019442.01 | 0.846650 | 1.901429e-59 | 3.295518e-56 |
| MsG0180002492.01 | MsG0480019442.01 | 0.804119 | 2.516719e-49 | 1.287067e-46 |
| MsG0180003686.01 | MsG0480019442.01 | 0.803465 | 3.440842e-49 | 1.730303e-46 |
| MsG0180004149.01 | MsG0480019442.01 | 0.806898 | 6.577181e-50 | 3.612315e-47 |
| MsG0180004249.01 | MsG0480019442.01 | 0.801173 | 1.020405e-48 | 4.840576e-46 |
| MsG0180004465.01 | MsG0480019442.01 | 0.833183 | 6.174140e-56 | 7.056280e-53 |
| MsG0180004486.01 | MsG0480019442.01 | 0.811694 | 6.157835e-51 | 3.837403e-48 |
| MsG0180004926.01 | MsG0480019442.01 | 0.803727 | 3.036806e-49 | 1.537433e-46 |
| MsG0180004996.01 | MsG0480019442.01 | 0.829691 | 4.467081e-55 | 4.606284e-52 |
| MsG0180005050.01 | MsG0480019442.01 | 0.813893 | 2.032897e-51 | 1.344049e-48 |
| MsG0180005185.01 | MsG0480019442.01 | 0.826692 | 2.359892e-54 | 2.229196e-51 |
| MsG0180005205.01 | MsG0480019442.01 | 0.818823 | 1.602940e-52 | 1.212657e-49 |
| MsG0180005445.01 | MsG0480019442.01 | 0.823536 | 1.314212e-53 | 1.134680e-50 |
| MsG0180005575.01 | MsG0480019442.01 | 0.809702 | 1.660666e-50 | 9.818984e-48 |
| MsG0280010599.01 | MsG0480019442.01 | 0.817436 | 3.301613e-52 | 2.404352e-49 |
| MsG0280010698.01 | MsG0480019442.01 | 0.813987 | 1.937602e-51 | 1.284273e-48 |
| MsG0280010712.01 | MsG0480019442.01 | 0.817322 | 3.502041e-52 | 2.542206e-49 |
| MsG0280010796.01 | MsG0480019442.01 | 0.807273 | 5.479485e-50 | 3.038959e-47 |
| MsG0380011537.01 | MsG0480019442.01 | 0.820092 | 8.232340e-53 | 6.452495e-50 |
| MsG0380011609.01 | MsG0480019442.01 | 0.813400 | 2.609928e-51 | 1.702663e-48 |
| MsG0380011716.01 | MsG0480019442.01 | 0.826239 | 3.024748e-54 | 2.820704e-51 |
| MsG0380011755.01 | MsG0480019442.01 | 0.803490 | 3.400250e-49 | 1.711018e-46 |
| MsG0380012057.01 | MsG0480019442.01 | 0.809606 | 1.741680e-50 | 1.027230e-47 |
| MsG0380012067.01 | MsG0480019442.01 | 0.828427 | 9.047317e-55 | 8.989998e-52 |
| MsG0380012365.01 | MsG0480019442.01 | 0.807005 | 6.242690e-50 | 3.438161e-47 |
| MsG0380012371.01 | MsG0480019442.01 | 0.813865 | 2.061119e-51 | 1.361684e-48 |
| MsG0380012460.01 | MsG0480019442.01 | 0.809264 | 2.062367e-50 | 1.205272e-47 |
| MsG0380013176.01 | MsG0480019442.01 | 0.806943 | 6.434024e-50 | 3.537835e-47 |
| MsG0380013834.01 | MsG0480019442.01 | 0.812603 | 3.901543e-51 | 2.491441e-48 |
| MsG0380014537.01 | MsG0480019442.01 | 0.807539 | 4.812260e-50 | 2.687314e-47 |
| MsG0380014573.01 | MsG0480019442.01 | 0.802835 | 4.645383e-49 | 2.298835e-46 |
| MsG0380014701.01 | MsG0480019442.01 | 0.811481 | 6.852095e-51 | 4.246386e-48 |
| MsG0480018465.01 | MsG0480019442.01 | 0.817369 | 3.418169e-52 | 2.484587e-49 |
| MsG0480018778.01 | MsG0480019442.01 | 0.804584 | 2.014337e-49 | 1.042498e-46 |
| MsG0480018883.01 | MsG0480019442.01 | 0.806657 | 7.395768e-50 | 4.036489e-47 |
| MsG0480019336.01 | MsG0480019442.01 | 0.809349 | 1.976982e-50 | 1.158062e-47 |
| MsG0480019435.01 | MsG0480019442.01 | 0.848824 | 4.789656e-60 | 8.900861e-57 |
| MsG0480019442.01 | MsG0480019562.01 | 0.808930 | 2.431150e-50 | 1.408072e-47 |
| MsG0480019442.01 | MsG0480019970.01 | 0.816567 | 5.173005e-52 | 3.678456e-49 |
| MsG0480019442.01 | MsG0480020634.01 | 0.802775 | 4.780787e-49 | 2.362153e-46 |
| MsG0480019442.01 | MsG0480020832.01 | 0.804113 | 2.524232e-49 | 1.290710e-46 |
| MsG0480019442.01 | MsG0480020907.01 | 0.863875 | 1.820972e-64 | 5.605323e-61 |
| MsG0480019442.01 | MsG0480021195.01 | 0.806457 | 8.150406e-50 | 4.426089e-47 |
| MsG0480019442.01 | MsG0480021280.01 | 0.800433 | 1.444927e-48 | 6.727140e-46 |
| MsG0480019442.01 | MsG0480021378.01 | 0.860836 | 1.564092e-63 | 4.334060e-60 |
| MsG0480019442.01 | MsG0480021452.01 | 0.828709 | 7.733956e-55 | 7.747797e-52 |
| MsG0480019442.01 | MsG0480021534.01 | 0.804484 | 2.113108e-49 | 1.090785e-46 |
| MsG0480019442.01 | MsG0480021778.01 | 0.801138 | 1.037124e-48 | 4.915836e-46 |
| MsG0480019442.01 | MsG0480021784.01 | 0.814703 | 1.346134e-51 | 9.097273e-49 |
| MsG0480019442.01 | MsG0480021796.01 | 0.804269 | 2.343132e-49 | 1.202838e-46 |
| MsG0480019442.01 | MsG0480021918.01 | 0.813645 | 2.305270e-51 | 1.513917e-48 |
| MsG0480019442.01 | MsG0480022068.01 | 0.822973 | 1.778841e-53 | 1.511679e-50 |
| MsG0480019442.01 | MsG0480022615.01 | -0.817274 | 3.589860e-52 | 2.602491e-49 |
| MsG0480019442.01 | MsG0480022825.01 | 0.813052 | 3.111397e-51 | 2.010581e-48 |
| MsG0480019442.01 | MsG0480022827.01 | 0.838631 | 2.563782e-57 | 3.454458e-54 |
| MsG0480019442.01 | MsG0480023172.01 | 0.835515 | 1.604318e-56 | 1.966353e-53 |
| MsG0480019442.01 | MsG0480023202.01 | 0.803865 | 2.842214e-49 | 1.444127e-46 |
| MsG0480019442.01 | MsG0480023251.01 | 0.808828 | 2.556717e-50 | 1.476811e-47 |
| MsG0480019442.01 | MsG0480023488.01 | 0.832376 | 9.791249e-56 | 1.092372e-52 |
| MsG0480019442.01 | MsG0480023654.01 | 0.832368 | 9.839120e-56 | 1.097438e-52 |
| MsG0480019442.01 | MsG0480023718.01 | 0.829221 | 5.811616e-55 | 5.910755e-52 |
| MsG0480019442.01 | MsG0580024038.01 | 0.845376 | 4.220627e-59 | 7.019587e-56 |
| MsG0480019442.01 | MsG0580024304.01 | 0.818775 | 1.643416e-52 | 1.241697e-49 |
| MsG0480019442.01 | MsG0580024418.01 | 0.801700 | 7.955937e-49 | 3.824567e-46 |
| MsG0480019442.01 | MsG0580024981.01 | 0.805496 | 1.297820e-49 | 6.876312e-47 |
| MsG0480019442.01 | MsG0580025332.01 | 0.804554 | 2.043345e-49 | 1.056689e-46 |
| MsG0480019442.01 | MsG0580025532.01 | 0.809490 | 1.844311e-50 | 1.084329e-47 |
| MsG0480019442.01 | MsG0580025555.01 | 0.808871 | 2.502587e-50 | 1.447226e-47 |
| MsG0480019442.01 | MsG0580025723.01 | 0.829174 | 5.967192e-55 | 6.060462e-52 |
| MsG0480019442.01 | MsG0580025758.01 | 0.828404 | 9.159984e-55 | 9.096128e-52 |
| MsG0480019442.01 | MsG0580025987.01 | 0.801505 | 8.725031e-49 | 4.173823e-46 |
| MsG0480019442.01 | MsG0580026002.01 | 0.812385 | 4.354571e-51 | 2.764800e-48 |
| MsG0480019442.01 | MsG0580026075.01 | 0.802067 | 6.687753e-49 | 3.245188e-46 |
| MsG0480019442.01 | MsG0580026511.01 | 0.806829 | 6.801237e-50 | 3.728785e-47 |
| MsG0480019442.01 | MsG0580027152.01 | 0.824311 | 8.646793e-54 | 7.630495e-51 |
| MsG0480019442.01 | MsG0580027211.01 | 0.837744 | 4.337488e-57 | 5.688394e-54 |
| MsG0480019442.01 | MsG0580027320.01 | 0.827222 | 1.762340e-54 | 1.690702e-51 |
| MsG0480019442.01 | MsG0580027650.01 | 0.815137 | 1.078299e-51 | 7.372843e-49 |
| MsG0480019442.01 | MsG0580027745.01 | 0.818272 | 2.137884e-52 | 1.592865e-49 |
| MsG0480019442.01 | MsG0580027925.01 | 0.804973 | 1.670337e-49 | 8.732290e-47 |
| MsG0480019442.01 | MsG0580028517.01 | 0.817421 | 3.326476e-52 | 2.421493e-49 |
| MsG0480019442.01 | MsG0580029554.01 | 0.827261 | 1.724913e-54 | 1.656793e-51 |
| MsG0480019442.01 | MsG0580029651.01 | 0.810532 | 1.099778e-50 | 6.645818e-48 |
| MsG0480019442.01 | MsG0580029925.01 | 0.821021 | 5.038707e-53 | 4.052450e-50 |
| MsG0480019442.01 | MsG0580029926.01 | 0.807297 | 5.415913e-50 | 3.005553e-47 |
| MsG0480019442.01 | MsG0680030364.01 | 0.825066 | 5.740142e-54 | 5.177010e-51 |
| MsG0480019442.01 | MsG0680030447.01 | 0.806534 | 7.851042e-50 | 4.271797e-47 |
| MsG0480019442.01 | MsG0680030881.01 | 0.823395 | 1.417707e-53 | 1.219053e-50 |
| MsG0480019442.01 | MsG0680031506.01 | 0.803918 | 2.771848e-49 | 1.410303e-46 |
| MsG0480019442.01 | MsG0680031617.01 | 0.807396 | 5.159450e-50 | 2.870662e-47 |
| MsG0480019442.01 | MsG0680032157.01 | 0.801325 | 9.494960e-49 | 4.521542e-46 |
| MsG0480019442.01 | MsG0680032935.01 | 0.816298 | 5.943499e-52 | 4.195620e-49 |
| MsG0480019442.01 | MsG0680033302.01 | 0.805222 | 1.481270e-49 | 7.793221e-47 |
| MsG0480019442.01 | MsG0680035346.01 | 0.808594 | 2.868194e-50 | 1.646633e-47 |
| MsG0480019442.01 | MsG0680035475.01 | 0.827862 | 1.237179e-54 | 1.209283e-51 |
| MsG0480019442.01 | MsG0680035658.01 | 0.800258 | 1.567837e-48 | 7.267064e-46 |
| MsG0480019442.01 | MsG0780036340.01 | 0.823577 | 1.285005e-53 | 1.110801e-50 |
| MsG0480019442.01 | MsG0780036719.01 | 0.808059 | 3.730722e-50 | 2.111885e-47 |
| MsG0480019442.01 | MsG0780036810.01 | 0.800640 | 1.311070e-48 | 6.136050e-46 |
| MsG0480019442.01 | MsG0780037054.01 | 0.805068 | 1.595732e-49 | 8.362500e-47 |
| MsG0480019442.01 | MsG0780037141.01 | 0.805385 | 1.369177e-49 | 7.233744e-47 |
| MsG0480019442.01 | MsG0780037144.01 | 0.800862 | 1.180987e-48 | 5.558621e-46 |
| MsG0480019442.01 | MsG0780037146.01 | 0.818882 | 1.554395e-52 | 1.177921e-49 |
| MsG0480019442.01 | MsG0780037845.01 | 0.813349 | 2.677269e-51 | 1.744175e-48 |
| MsG0480019442.01 | MsG0780038150.01 | 0.817163 | 3.802084e-52 | 2.748109e-49 |
| MsG0480019442.01 | MsG0780038188.01 | 0.811139 | 8.129897e-51 | 4.992938e-48 |
| MsG0480019442.01 | MsG0780038386.01 | 0.815284 | 1.000149e-51 | 6.866670e-49 |
| MsG0480019442.01 | MsG0780038439.01 | 0.825329 | 4.973261e-54 | 4.519263e-51 |
| MsG0480019442.01 | MsG0780038602.01 | 0.823291 | 1.499095e-53 | 1.285397e-50 |
| MsG0480019442.01 | MsG0780038603.01 | 0.830765 | 2.442680e-55 | 2.598465e-52 |
| MsG0480019442.01 | MsG0780038827.01 | 0.804466 | 2.131336e-49 | 1.099687e-46 |
| MsG0480019442.01 | MsG0780039155.01 | 0.807358 | 5.255665e-50 | 2.921214e-47 |
| MsG0480019442.01 | MsG0780039170.01 | 0.807124 | 5.890854e-50 | 3.254287e-47 |
| MsG0480019442.01 | MsG0780039178.01 | 0.808040 | 3.765704e-50 | 2.130604e-47 |
| MsG0480019442.01 | MsG0780039423.01 | 0.821192 | 4.601686e-53 | 3.718413e-50 |
| MsG0480019442.01 | MsG0780039443.01 | 0.844332 | 8.072107e-59 | 1.298850e-55 |
| MsG0480019442.01 | MsG0780039655.01 | 0.801013 | 1.100112e-48 | 5.198040e-46 |
| MsG0480019442.01 | MsG0780040044.01 | 0.809639 | 1.712845e-50 | 1.011130e-47 |
| MsG0480019442.01 | MsG0780040074.01 | 0.821534 | 3.837122e-53 | 3.130021e-50 |
| MsG0480019442.01 | MsG0780040576.01 | -0.821148 | 4.710374e-53 | 3.801390e-50 |
| MsG0480019442.01 | MsG0780041033.01 | 0.806140 | 9.504497e-50 | 5.119829e-47 |
| MsG0480019442.01 | MsG0780041432.01 | 0.801880 | 7.305766e-49 | 3.528433e-46 |
| MsG0480019442.01 | MsG0880041863.01 | 0.813173 | 2.927064e-51 | 1.897607e-48 |
| MsG0480019442.01 | MsG0880042161.01 | 0.801570 | 8.460058e-49 | 4.053616e-46 |
| MsG0480019442.01 | MsG0880042518.01 | 0.819076 | 1.404089e-52 | 1.069672e-49 |
| MsG0480019442.01 | MsG0880042520.01 | 0.836573 | 8.644013e-57 | 1.093677e-53 |
| MsG0480019442.01 | MsG0880042698.01 | 0.821563 | 3.777772e-53 | 3.084283e-50 |
| MsG0480019442.01 | MsG0880042857.01 | 0.800917 | 1.150858e-48 | 5.424446e-46 |
| MsG0480019442.01 | MsG0880043157.01 | 0.817580 | 3.064019e-52 | 2.239999e-49 |
| MsG0480019442.01 | MsG0880043479.01 | 0.806550 | 7.791107e-50 | 4.240968e-47 |
| MsG0480019442.01 | MsG0880043480.01 | 0.829152 | 6.040719e-55 | 6.130715e-52 |
| MsG0480019442.01 | MsG0880043521.01 | 0.829037 | 6.440467e-55 | 6.513772e-52 |
| MsG0480019442.01 | MsG0880043937.01 | 0.818641 | 1.762915e-52 | 1.326961e-49 |
| MsG0480019442.01 | MsG0880043941.01 | 0.846309 | 2.354945e-59 | 4.036123e-56 |
| MsG0480019442.01 | MsG0880044210.01 | 0.806504 | 7.968170e-50 | 4.332132e-47 |
| MsG0480019442.01 | MsG0880044415.01 | 0.801153 | 1.029660e-48 | 4.882270e-46 |
| MsG0480019442.01 | MsG0880044477.01 | 0.804544 | 2.053315e-49 | 1.061555e-46 |
| MsG0480019442.01 | MsG0880044510.01 | 0.803182 | 3.938021e-49 | 1.965997e-46 |
| MsG0480019442.01 | MsG0880044554.01 | 0.800638 | 1.312155e-48 | 6.140815e-46 |
| MsG0480019442.01 | MsG0880044573.01 | 0.835778 | 1.376706e-56 | 1.700707e-53 |
| MsG0480019442.01 | MsG0880044950.01 | 0.808172 | 3.528762e-50 | 2.003741e-47 |
| MsG0480019442.01 | MsG0880045111.01 | 0.830211 | 3.336045e-55 | 3.491984e-52 |
| MsG0480019442.01 | MsG0880045372.01 | 0.800330 | 1.515816e-48 | 7.038993e-46 |
| MsG0480019442.01 | MsG0880045639.01 | 0.809311 | 2.014774e-50 | 1.178936e-47 |
| MsG0480019442.01 | MsG0880046264.01 | 0.814356 | 1.606058e-51 | 1.075256e-48 |
| MsG0480019442.01 | MsG0880046531.01 | 0.834895 | 2.299974e-56 | 2.766949e-53 |
| MsG0480019442.01 | MsG0880046901.01 | 0.804811 | 1.805821e-49 | 9.401616e-47 |
| MsG0480019442.01 | MsG0880047472.01 | 0.806638 | 7.463825e-50 | 4.071655e-47 |
| MsG0480019442.01 | MsG0880047594.01 | 0.826717 | 2.326971e-54 | 2.199640e-51 |
| MsG0380015300.01 | MsG0480019442.01 | 0.821154 | 4.694429e-53 | 3.789238e-50 |
| MsG0380015332.01 | MsG0480019442.01 | 0.822826 | 1.924526e-53 | 1.628764e-50 |
| MsG0380015436.01 | MsG0480019442.01 | 0.826850 | 2.163691e-54 | 2.053154e-51 |
| MsG0380015555.01 | MsG0480019442.01 | 0.813233 | 2.839077e-51 | 1.843592e-48 |
| MsG0380015720.01 | MsG0480019442.01 | 0.804161 | 2.467587e-49 | 1.263254e-46 |
| MsG0380016064.01 | MsG0480019442.01 | 0.846407 | 2.214447e-59 | 3.808025e-56 |
| MsG0380016131.01 | MsG0480019442.01 | 0.829945 | 3.875496e-55 | 4.025437e-52 |
| MsG0380016209.01 | MsG0480019442.01 | 0.808865 | 2.510476e-50 | 1.451570e-47 |
| MsG0380016247.01 | MsG0480019442.01 | 0.806133 | 9.539888e-50 | 5.137786e-47 |
| MsG0380016391.01 | MsG0480019442.01 | 0.857540 | 1.522341e-62 | 3.770303e-59 |
| MsG0380016517.01 | MsG0480019442.01 | 0.847619 | 1.031150e-59 | 1.843411e-56 |
| MsG0380016970.01 | MsG0480019442.01 | 0.815779 | 7.761836e-52 | 5.402037e-49 |
| MsG0380017048.01 | MsG0480019442.01 | 0.806026 | 1.004304e-49 | 5.394266e-47 |
| MsG0380017220.01 | MsG0480019442.01 | 0.809730 | 1.637627e-50 | 9.690296e-48 |
| MsG0380017233.01 | MsG0480019442.01 | 0.816431 | 5.549708e-52 | 3.931483e-49 |
| MsG0480018163.01 | MsG0480019442.01 | 0.809467 | 1.865402e-50 | 1.096065e-47 |
| MsG0480018183.01 | MsG0480019442.01 | 0.808821 | 2.564816e-50 | 1.481257e-47 |
| MsG0480018236.01 | MsG0480019442.01 | 0.827815 | 1.269960e-54 | 1.239473e-51 |
| MsG0480018251.01 | MsG0480019442.01 | 0.807809 | 4.215552e-50 | 2.370772e-47 |
| MsG0480018313.01 | MsG0480019442.01 | 0.806242 | 9.045767e-50 | 4.885552e-47 |
| MsG0480018318.01 | MsG0480019442.01 | 0.835069 | 2.079328e-56 | 2.514428e-53 |
| MsG0280007066.01 | MsG0480019442.01 | 0.818734 | 1.679701e-52 | 1.267598e-49 |
| MsG0280007072.01 | MsG0480019442.01 | 0.836146 | 1.109900e-56 | 1.386557e-53 |
| MsG0280007311.01 | MsG0480019442.01 | 0.809056 | 2.285351e-50 | 1.328151e-47 |
| MsG0280007496.01 | MsG0480019442.01 | 0.833973 | 3.921026e-56 | 4.589197e-53 |
| MsG0280007955.01 | MsG0480019442.01 | 0.827429 | 1.572137e-54 | 1.517396e-51 |
| MsG0280008100.01 | MsG0480019442.01 | 0.801700 | 7.955099e-49 | 3.824183e-46 |
| MsG0280008112.01 | MsG0480019442.01 | 0.803026 | 4.243004e-49 | 2.109683e-46 |
| MsG0280008113.01 | MsG0480019442.01 | 0.802310 | 5.961234e-49 | 2.910777e-46 |
| MsG0280008363.01 | MsG0480019442.01 | 0.810700 | 1.011736e-50 | 6.141579e-48 |
| MsG0280008378.01 | MsG0480019442.01 | 0.810846 | 9.410300e-51 | 5.734645e-48 |
| MsG0280008457.01 | MsG0480019442.01 | 0.823801 | 1.139032e-53 | 9.909362e-51 |
| MsG0280008615.01 | MsG0480019442.01 | 0.816880 | 4.402415e-52 | 3.157519e-49 |
| MsG0280008894.01 | MsG0480019442.01 | 0.801970 | 7.002730e-49 | 3.389445e-46 |
| MsG0280009024.01 | MsG0480019442.01 | 0.806184 | 9.306382e-50 | 5.018784e-47 |
| MsG0280009668.01 | MsG0480019442.01 | 0.803712 | 3.058465e-49 | 1.547743e-46 |
| MsG0280009739.01 | MsG0480019442.01 | 0.837826 | 4.133763e-57 | 5.434575e-54 |
| MsG0280009748.01 | MsG0480019442.01 | 0.816104 | 6.569344e-52 | 4.612671e-49 |
| MsG0280010287.01 | MsG0480019442.01 | 0.809717 | 1.648020e-50 | 9.748309e-48 |
| MsG0280010349.01 | MsG0480019442.01 | 0.803159 | 3.981703e-49 | 1.986619e-46 |
| MsG0280010350.01 | MsG0480019442.01 | 0.808121 | 3.618331e-50 | 2.051709e-47 |
| MsG0280010443.01 | MsG0480019442.01 | 0.817502 | 3.189636e-52 | 2.326999e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019442.01.T01 | MTR_4g062570 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 714 |
| MsG0480019442.01.T01 | MTR_4g072780 | 98.034 | 356 | 7 | 0 | 1 | 356 | 1 | 356 | 0.0 | 713 |
| MsG0480019442.01.T01 | MTR_4g062550 | 97.191 | 356 | 10 | 0 | 1 | 356 | 1 | 356 | 0.0 | 710 |
| MsG0480019442.01.T01 | MTR_4g032360 | 97.753 | 356 | 8 | 0 | 1 | 356 | 1 | 356 | 0.0 | 710 |
| MsG0480019442.01.T01 | MTR_5g022720 | 86.607 | 224 | 7 | 1 | 133 | 356 | 73 | 273 | 4.35e-135 | 386 |
| MsG0480019442.01.T01 | MTR_8g088860 | 42.017 | 357 | 204 | 3 | 1 | 354 | 1 | 357 | 1.90e-102 | 306 |
| MsG0480019442.01.T01 | MTR_8g088880 | 40.805 | 348 | 204 | 2 | 1 | 346 | 1 | 348 | 4.58e-96 | 290 |
| MsG0480019442.01.T01 | MTR_8g088890 | 39.867 | 301 | 179 | 2 | 29 | 327 | 1 | 301 | 1.31e-83 | 256 |
| MsG0480019442.01.T01 | MTR_7g097000 | 22.838 | 451 | 213 | 11 | 17 | 334 | 55 | 503 | 6.55e-23 | 100 |
| MsG0480019442.01.T01 | MTR_7g033690 | 91.667 | 36 | 3 | 0 | 31 | 66 | 1 | 36 | 2.27e-15 | 71.2 |
| MsG0480019442.01.T01 | MTR_7g096970 | 28.750 | 160 | 111 | 2 | 196 | 353 | 365 | 523 | 1.67e-13 | 72.0 |
| MsG0480019442.01.T01 | MTR_7g096970 | 26.425 | 193 | 100 | 5 | 30 | 180 | 61 | 253 | 8.61e-12 | 66.6 |
| MsG0480019442.01.T01 | MTR_2g093550 | 30.061 | 163 | 104 | 6 | 176 | 333 | 50 | 207 | 3.61e-12 | 65.9 |
| MsG0480019442.01.T01 | MTR_2g093630 | 32.374 | 139 | 86 | 5 | 200 | 333 | 61 | 196 | 5.15e-12 | 65.5 |
| MsG0480019442.01.T01 | MTR_2g093350 | 27.778 | 180 | 119 | 7 | 181 | 355 | 281 | 454 | 1.17e-11 | 66.2 |
| MsG0480019442.01.T01 | MTR_2g093620 | 32.143 | 140 | 87 | 5 | 200 | 334 | 296 | 432 | 1.97e-11 | 65.5 |
| MsG0480019442.01.T01 | MTR_2g093590 | 29.012 | 162 | 104 | 7 | 200 | 355 | 295 | 451 | 2.28e-11 | 65.1 |
| MsG0480019442.01.T01 | MTR_1g072600 | 28.671 | 143 | 95 | 4 | 196 | 335 | 422 | 560 | 3.20e-11 | 65.1 |
| MsG0480019442.01.T01 | MTR_2g093390 | 31.655 | 139 | 87 | 5 | 200 | 333 | 295 | 430 | 5.86e-11 | 63.9 |
| MsG0480019442.01.T01 | MTR_1g072610 | 28.671 | 143 | 95 | 4 | 196 | 335 | 391 | 529 | 7.94e-11 | 63.5 |
| MsG0480019442.01.T01 | MTR_4g060780 | 32.743 | 113 | 73 | 3 | 223 | 333 | 307 | 418 | 7.99e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019442.01.T01 | AT1G07750 | 80.056 | 356 | 71 | 0 | 1 | 356 | 1 | 356 | 0.0 | 598 |
| MsG0480019442.01.T01 | AT2G28680 | 78.652 | 356 | 76 | 0 | 1 | 356 | 1 | 356 | 0.0 | 592 |
| MsG0480019442.01.T01 | AT1G03890 | 24.939 | 409 | 243 | 11 | 5 | 354 | 44 | 447 | 3.46e-32 | 125 |
| MsG0480019442.01.T01 | AT1G03880 | 23.469 | 392 | 234 | 9 | 12 | 339 | 42 | 431 | 8.95e-29 | 116 |
| MsG0480019442.01.T01 | AT5G44120 | 22.475 | 396 | 234 | 8 | 12 | 336 | 48 | 441 | 8.97e-25 | 105 |
| MsG0480019442.01.T01 | AT5G44120 | 23.780 | 328 | 203 | 7 | 54 | 336 | 12 | 337 | 1.58e-20 | 92.0 |
| MsG0480019442.01.T01 | AT4G28520 | 25.914 | 301 | 180 | 7 | 78 | 336 | 193 | 492 | 5.31e-19 | 88.6 |
| MsG0480019442.01.T01 | AT2G28490 | 23.219 | 379 | 221 | 12 | 42 | 355 | 122 | 495 | 1.55e-15 | 78.2 |
| MsG0480019442.01.T01 | AT4G28520 | 30.714 | 140 | 96 | 1 | 197 | 336 | 283 | 421 | 1.83e-15 | 77.8 |
| MsG0480019442.01.T01 | AT5G44120 | 24.123 | 228 | 145 | 4 | 136 | 336 | 28 | 254 | 1.56e-13 | 70.5 |
Find 104 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTTCTGCACTTCTATTT+TGG | 0.162055 | 4:+20471342 | MsG0480019442.01.T01:three_prime_UTR |
| AATTCTATTCTACTTTAATT+TGG | 0.172579 | 4:-20471242 | None:intergenic |
| AGAGAAGGTTGTTGAAATTA+AGG | 0.179008 | 4:+20470284 | MsG0480019442.01.T01:CDS |
| CCTTTCTTGTGTTCCTCTTT+AGG | 0.185981 | 4:-20470588 | None:intergenic |
| CGGAAGAGTTTCTCAACTTC+TGG | 0.234773 | 4:-20471182 | None:intergenic |
| TGCAGGTTACTTACATTGTT+AGG | 0.243182 | 4:+20470787 | MsG0480019442.01.T01:CDS |
| GGTCCTAATGGAATCTTTAC+TGG | 0.258702 | 4:+20470444 | MsG0480019442.01.T01:CDS |
| ACAACCTTCTCTTCTGATTC+AGG | 0.278555 | 4:-20470273 | None:intergenic |
| CTCGTGTGATTCAGCTTTGC+AGG | 0.279052 | 4:+20470770 | MsG0480019442.01.T01:CDS |
| CTGAATTTGTCGGAAGGGCT+TGG | 0.330082 | 4:+20470475 | MsG0480019442.01.T01:CDS |
| CTTCCTTTGGTTGGTGAGGT+TGG | 0.336501 | 4:+20470693 | MsG0480019442.01.T01:CDS |
| TATTGATCTTTCTCCTCAAT+TGG | 0.349227 | 4:+20469085 | MsG0480019442.01.T01:CDS |
| TTGGTTGGTGAGGTTGGTTT+AGG | 0.350208 | 4:+20470699 | MsG0480019442.01.T01:CDS |
| ATTTGGAGGAGGGAAGAAAA+TGG | 0.351352 | 4:-20471225 | None:intergenic |
| TAGGTACTCTGATTCTTCTA+AGG | 0.354764 | 4:+20469235 | MsG0480019442.01.T01:CDS |
| GTTCAAGTTGTTGGTGTTGA+TGG | 0.359778 | 4:+20470822 | MsG0480019442.01.T01:CDS |
| TGTTGATGGAAAGAGAGTTT+TGG | 0.361112 | 4:+20470836 | MsG0480019442.01.T01:CDS |
| TGTCGGAAGGGCTTGGGACT+TGG | 0.373148 | 4:+20470482 | MsG0480019442.01.T01:CDS |
| GGAAGATCCATGTGCTCTCC+TGG | 0.393343 | 4:+20470744 | MsG0480019442.01.T01:CDS |
| TGAATTTGTCGGAAGGGCTT+GGG | 0.397972 | 4:+20470476 | MsG0480019442.01.T01:CDS |
| GCAGGTTACTTACATTGTTA+GGG | 0.405546 | 4:+20470788 | MsG0480019442.01.T01:CDS |
| AAGGTTGCTTATGTTCTTCA+AGG | 0.410175 | 4:+20469254 | MsG0480019442.01.T01:CDS |
| ACCAACCAAAGGAAGGTTCT+TGG | 0.412307 | 4:-20470685 | None:intergenic |
| GAACACCAAGAACCTTCCTT+TGG | 0.413394 | 4:+20470680 | MsG0480019442.01.T01:CDS |
| GAAATAGGAAGTGGAGTTGC+TGG | 0.419805 | 4:+20470240 | MsG0480019442.01.T01:intron |
| AATCCAGTAAAGATTCCATT+AGG | 0.431957 | 4:-20470447 | None:intergenic |
| AAGTTAGCTCTTCAGAAGAA+TGG | 0.434931 | 4:+20469200 | MsG0480019442.01.T01:CDS |
| AGGCATGGCTTTGAACTGTC+TGG | 0.438625 | 4:+20470608 | MsG0480019442.01.T01:CDS |
| GATGCATTAGCACTCCCCTT+TGG | 0.445240 | 4:+20470312 | MsG0480019442.01.T01:CDS |
| TCTATTCTACTTTAATTTGG+AGG | 0.448448 | 4:-20471239 | None:intergenic |
| ATTCTTCTGAAGAGCTAACT+TGG | 0.448714 | 4:-20469198 | None:intergenic |
| AGTGGCCGTGTTCAAGTTGT+TGG | 0.449418 | 4:+20470813 | MsG0480019442.01.T01:CDS |
| ACACATGGCTGGAAGTTCTT+CGG | 0.454286 | 4:+20471109 | MsG0480019442.01.T01:CDS |
| GCCGACCTTGTGAGGATTGA+CGG | 0.454875 | 4:+20470723 | MsG0480019442.01.T01:CDS |
| TACACTTTCTTAGCCAATTG+AGG | 0.457011 | 4:-20469098 | None:intergenic |
| GAACTGTCTGGAGGCACCAT+TGG | 0.458104 | 4:+20470620 | MsG0480019442.01.T01:CDS |
| ACCAAGAACCTTCCTTTGGT+TGG | 0.462283 | 4:+20470684 | MsG0480019442.01.T01:CDS |
| CACCATGTCACAACACCAAA+GGG | 0.465835 | 4:-20470327 | None:intergenic |
| TCAAAGATCGCTGACAATGA+TGG | 0.467363 | 4:+20470912 | MsG0480019442.01.T01:CDS |
| TCCCCTTTGGTGTTGTGACA+TGG | 0.472969 | 4:+20470325 | MsG0480019442.01.T01:CDS |
| GAACCTTCCTTTGGTTGGTG+AGG | 0.484774 | 4:+20470689 | MsG0480019442.01.T01:CDS |
| GTTGGAAACCAGTCCGCTAA+AGG | 0.487210 | 4:+20470528 | MsG0480019442.01.T01:CDS |
| TTGGAGACAACTTTGAAGGC+TGG | 0.487933 | 4:+20470855 | MsG0480019442.01.T01:CDS |
| TTGTGTTCCTCTTTAGGCTG+AGG | 0.488103 | 4:-20470582 | None:intergenic |
| ATTCTACTTTAATTTGGAGG+AGG | 0.489707 | 4:-20471236 | None:intergenic |
| TCACAATCCCTTTAGCGGAC+TGG | 0.492322 | 4:-20470536 | None:intergenic |
| GAGTTGATTATTCTGTTCCT+CGG | 0.501741 | 4:+20470369 | MsG0480019442.01.T01:CDS |
| AAAGGGATTGTGAAGCTTGA+CGG | 0.504436 | 4:+20470546 | MsG0480019442.01.T01:CDS |
| TTGGAAACCAGTCCGCTAAA+GGG | 0.505396 | 4:+20470529 | MsG0480019442.01.T01:CDS |
| TGGAAGTTCTTCGGTGTGGA+AGG | 0.510879 | 4:+20471118 | MsG0480019442.01.T01:CDS |
| AAGCCTTCCTCAGCCTAAAG+AGG | 0.511319 | 4:+20470575 | MsG0480019442.01.T01:CDS |
| GAAGGTTGTTGAAATTAAGG+AGG | 0.513218 | 4:+20470287 | MsG0480019442.01.T01:CDS |
| CAGTCCTGTATTTACACACA+TGG | 0.513502 | 4:+20471094 | MsG0480019442.01.T01:intron |
| GTTCCTCTTTAGGCTGAGGA+AGG | 0.514264 | 4:-20470578 | None:intergenic |
| CCAGCCATGTGTGTAAATAC+AGG | 0.517118 | 4:-20471098 | None:intergenic |
| AAGCTTCACAATCCCTTTAG+CGG | 0.524791 | 4:-20470541 | None:intergenic |
| GCTGAATCACACGAGAATCC+AGG | 0.528245 | 4:-20470762 | None:intergenic |
| CCTAAAGAGGAACACAAGAA+AGG | 0.531592 | 4:+20470588 | MsG0480019442.01.T01:CDS |
| TTGGATGTTGATATTAAGAA+TGG | 0.538544 | 4:+20470639 | MsG0480019442.01.T01:CDS |
| AAGGTTGTTGAAATTAAGGA+GGG | 0.547924 | 4:+20470288 | MsG0480019442.01.T01:CDS |
| CGAGAATCCAGGAGAGCACA+TGG | 0.549437 | 4:-20470751 | None:intergenic |
| CCTGTATTTACACACATGGC+TGG | 0.553443 | 4:+20471098 | MsG0480019442.01.T01:CDS |
| ATGGTGGATCGTACTATGCT+TGG | 0.553996 | 4:+20469129 | MsG0480019442.01.T01:CDS |
| TTCAACTGAATTTGTCGGAA+GGG | 0.556496 | 4:+20470470 | MsG0480019442.01.T01:CDS |
| TTGATATTAAGAATGGTGGA+AGG | 0.557402 | 4:+20470646 | MsG0480019442.01.T01:CDS |
| AGAAACTCTTCCGTTCAAAG+AGG | 0.562170 | 4:+20471192 | MsG0480019442.01.T01:CDS |
| AACAATGTGAAGACACTCGT+TGG | 0.569108 | 4:+20470510 | MsG0480019442.01.T01:CDS |
| AAAGCAGCTTGTAGAACTGT+AGG | 0.569112 | 4:-20471149 | None:intergenic |
| ACTTCAAAAGCACACAAAGC+TGG | 0.570945 | 4:+20470396 | MsG0480019442.01.T01:CDS |
| GTTTAGGAGCCGACCTTGTG+AGG | 0.570960 | 4:+20470715 | MsG0480019442.01.T01:CDS |
| TTCTACTTTAATTTGGAGGA+GGG | 0.573312 | 4:-20471235 | None:intergenic |
| GATCGCTGACAATGATGGAA+TGG | 0.576638 | 4:+20470917 | MsG0480019442.01.T01:CDS |
| GATGTTGATATTAAGAATGG+TGG | 0.582311 | 4:+20470642 | MsG0480019442.01.T01:CDS |
| CATCAGCAGTCCTCTTTGAA+CGG | 0.585723 | 4:-20471202 | None:intergenic |
| TCCGTCAATCCTCACAAGGT+CGG | 0.586645 | 4:-20470724 | None:intergenic |
| CAATTGGCTAAGAAAGTGTA+CGG | 0.588331 | 4:+20469101 | MsG0480019442.01.T01:CDS |
| ATGTTACCTTCACGTAACAT+AGG | 0.589093 | 4:-20469167 | None:intergenic |
| AAGAAAGTGTACGGTGGTGA+TGG | 0.591740 | 4:+20469110 | MsG0480019442.01.T01:CDS |
| TTCTTAATATCAACATCCAA+TGG | 0.592422 | 4:-20470636 | None:intergenic |
| CAGGTTACTTACATTGTTAG+GGG | 0.593840 | 4:+20470789 | MsG0480019442.01.T01:CDS |
| TTTCAACTGAATTTGTCGGA+AGG | 0.593930 | 4:+20470469 | MsG0480019442.01.T01:CDS |
| CCACCATGTCACAACACCAA+AGG | 0.611673 | 4:-20470328 | None:intergenic |
| AAAGTGTACGGTGGTGATGG+TGG | 0.612502 | 4:+20469113 | MsG0480019442.01.T01:CDS |
| GCTACCTGAATCAGAAGAGA+AGG | 0.615858 | 4:+20470269 | MsG0480019442.01.T01:CDS |
| CAACCTCACCAACCAAAGGA+AGG | 0.617830 | 4:-20470692 | None:intergenic |
| GAGATTTGTTCATTGTGCCG+AGG | 0.627746 | 4:+20470877 | MsG0480019442.01.T01:CDS |
| CGTAACATAGGAAGTTCAGA+AGG | 0.627815 | 4:-20469155 | None:intergenic |
| AGAGGAACACAAGAAAGGCA+TGG | 0.634599 | 4:+20470593 | MsG0480019442.01.T01:CDS |
| AAACCAACCTCACCAACCAA+AGG | 0.641668 | 4:-20470696 | None:intergenic |
| GAACTTCCTATGTTACGTGA+AGG | 0.642295 | 4:+20469161 | MsG0480019442.01.T01:CDS |
| TGGCTGGAAGTTCTTCGGTG+TGG | 0.642740 | 4:+20471114 | MsG0480019442.01.T01:CDS |
| ATGTTACGTGAAGGTAACAT+TGG | 0.643476 | 4:+20469170 | MsG0480019442.01.T01:CDS |
| AGGTTACTTACATTGTTAGG+GGG | 0.643730 | 4:+20470790 | MsG0480019442.01.T01:CDS |
| CAACACCAACAACTTGAACA+CGG | 0.644288 | 4:-20470818 | None:intergenic |
| ATCTTCCGTCAATCCTCACA+AGG | 0.651498 | 4:-20470728 | None:intergenic |
| CCTTTGGTGTTGTGACATGG+TGG | 0.659432 | 4:+20470328 | MsG0480019442.01.T01:CDS |
| TTAGAAGAATCAGAGTACCT+AGG | 0.659813 | 4:-20469233 | None:intergenic |
| CATGGCTTTGAACTGTCTGG+AGG | 0.664649 | 4:+20470611 | MsG0480019442.01.T01:CDS |
| TGATATTAAGAATGGTGGAA+GGG | 0.666660 | 4:+20470647 | MsG0480019442.01.T01:CDS |
| GACATGGTGGTACAACAAAG+AGG | 0.672878 | 4:+20470341 | MsG0480019442.01.T01:CDS |
| ACCATGTCACAACACCAAAG+GGG | 0.723908 | 4:-20470326 | None:intergenic |
| CTGACAATGATGGAATGGAG+TGG | 0.742748 | 4:+20470922 | MsG0480019442.01.T01:CDS |
| AGATTCCATTAGGACCAGTG+AGG | 0.751080 | 4:-20470437 | None:intergenic |
| TTGGCTAAGAAAGTGTACGG+TGG | 0.765051 | 4:+20469104 | MsG0480019442.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAGTTTTTCTTTTTTTAA+TGG | + | Chr4:20471263-20471282 | MsG0480019442.01.T01:three_prime_UTR | 10.0% |
| !! | AATTCTATTCTACTTTAATT+TGG | - | Chr4:20471245-20471264 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGTTTGATTCTAA+TGG | + | Chr4:20469612-20469631 | MsG0480019442.01.T01:intron | 15.0% |
| !! | AAATAGATATGATGAAACTT+TGG | - | Chr4:20469283-20469302 | None:intergenic | 20.0% |
| !! | ATAACAAAAGCTATTACAAA+CGG | + | Chr4:20470029-20470048 | MsG0480019442.01.T01:intron | 20.0% |
| !! | ATTCTAATGGAAGAAATATT+AGG | + | Chr4:20469625-20469644 | MsG0480019442.01.T01:intron | 20.0% |
| !! | TTCTACAATTCTATCAATAT+TGG | - | Chr4:20470186-20470205 | None:intergenic | 20.0% |
| !!! | GTTCTTAATTGTTTTTATGT+TGG | + | Chr4:20469367-20469386 | MsG0480019442.01.T01:intron | 20.0% |
| !!! | TAATTTTCTCAAACTATTAG+CGG | + | Chr4:20469495-20469514 | MsG0480019442.01.T01:intron | 20.0% |
| !!! | TATTAAAGTTTTTATTTGGC+AGG | + | Chr4:20469695-20469714 | MsG0480019442.01.T01:intron | 20.0% |
| ! | AGAATTGTTGAGATACTTAA+TGG | + | Chr4:20470202-20470221 | MsG0480019442.01.T01:intron | 25.0% |
| ! | ATACTTATAATTGCTTACTG+TGG | + | Chr4:20471053-20471072 | MsG0480019442.01.T01:intron | 25.0% |
| ! | GTATCTGCAATTTGATTAAA+AGG | - | Chr4:20470985-20471004 | None:intergenic | 25.0% |
| ! | TAACAAAAGCTATTACAAAC+GGG | + | Chr4:20470030-20470049 | MsG0480019442.01.T01:intron | 25.0% |
| ! | TTCTTAATATCAACATCCAA+TGG | - | Chr4:20470639-20470658 | None:intergenic | 25.0% |
| ! | TTGGATGTTGATATTAAGAA+TGG | + | Chr4:20470639-20470658 | MsG0480019442.01.T01:CDS | 25.0% |
| !!! | CTTGTTTGATTTTGTTTTTG+TGG | + | Chr4:20470086-20470105 | MsG0480019442.01.T01:intron | 25.0% |
| !!! | TCTATTCTACTTTAATTTGG+AGG | - | Chr4:20471242-20471261 | None:intergenic | 25.0% |
| !!! | TTGATTTTGTTTTTGTGGTA+TGG | + | Chr4:20470091-20470110 | MsG0480019442.01.T01:intron | 25.0% |
| AAGGTAAGAAAAACTCACTT+AGG | - | Chr4:20470966-20470985 | None:intergenic | 30.0% | |
| AAGGTTGTTGAAATTAAGGA+GGG | + | Chr4:20470288-20470307 | MsG0480019442.01.T01:CDS | 30.0% | |
| AATCCAGTAAAGATTCCATT+AGG | - | Chr4:20470450-20470469 | None:intergenic | 30.0% | |
| AGAGAAGGTTGTTGAAATTA+AGG | + | Chr4:20470284-20470303 | MsG0480019442.01.T01:CDS | 30.0% | |
| AGGTAAGAAAAACTCACTTA+GGG | - | Chr4:20470965-20470984 | None:intergenic | 30.0% | |
| ATTGCAGATACTGTTATTCA+AGG | + | Chr4:20470994-20471013 | MsG0480019442.01.T01:intron | 30.0% | |
| GATGTTGATATTAAGAATGG+TGG | + | Chr4:20470642-20470661 | MsG0480019442.01.T01:CDS | 30.0% | |
| TATTGATCTTTCTCCTCAAT+TGG | + | Chr4:20469085-20469104 | MsG0480019442.01.T01:CDS | 30.0% | |
| TGATTTGATGAAATAGGAAG+TGG | + | Chr4:20470231-20470250 | MsG0480019442.01.T01:intron | 30.0% | |
| TGGAGTAATGACATCAATTT+GGG | + | Chr4:20469566-20469585 | MsG0480019442.01.T01:intron | 30.0% | |
| TTGGAGTAATGACATCAATT+TGG | + | Chr4:20469565-20469584 | MsG0480019442.01.T01:intron | 30.0% | |
| ! | AAGTTTCTGCACTTCTATTT+TGG | + | Chr4:20471342-20471361 | MsG0480019442.01.T01:three_prime_UTR | 30.0% |
| ! | ATTAGCTTCTCAGAAAATCA+TGG | - | Chr4:20469895-20469914 | None:intergenic | 30.0% |
| ! | GGATTTTCAACTGAATTTGT+CGG | + | Chr4:20470465-20470484 | MsG0480019442.01.T01:CDS | 30.0% |
| ! | GTTTACTTGTTACTTGTTCT+CGG | + | Chr4:20471024-20471043 | MsG0480019442.01.T01:intron | 30.0% |
| ! | TGATATTAAGAATGGTGGAA+GGG | + | Chr4:20470647-20470666 | MsG0480019442.01.T01:CDS | 30.0% |
| ! | TTGATATTAAGAATGGTGGA+AGG | + | Chr4:20470646-20470665 | MsG0480019442.01.T01:CDS | 30.0% |
| !! | ATTCTACTTTAATTTGGAGG+AGG | - | Chr4:20471239-20471258 | None:intergenic | 30.0% |
| !! | ATTGCCTCAATTGATTTTTG+GGG | + | Chr4:20471379-20471398 | MsG0480019442.01.T01:three_prime_UTR | 30.0% |
| !! | GATTGCCTCAATTGATTTTT+GGG | + | Chr4:20471378-20471397 | MsG0480019442.01.T01:three_prime_UTR | 30.0% |
| !! | TGAAGCTGATTTGATGAAAT+AGG | + | Chr4:20470225-20470244 | MsG0480019442.01.T01:intron | 30.0% |
| !! | TGATTGCCTCAATTGATTTT+TGG | + | Chr4:20471377-20471396 | MsG0480019442.01.T01:three_prime_UTR | 30.0% |
| !! | TTCTACTTTAATTTGGAGGA+GGG | - | Chr4:20471238-20471257 | None:intergenic | 30.0% |
| !!! | GTGTAAGGGTCTATTTTTTA+TGG | + | Chr4:20469734-20469753 | MsG0480019442.01.T01:intron | 30.0% |
| !!! | TTTACTGATTTTTTCCTCAC+TGG | + | Chr4:20470423-20470442 | MsG0480019442.01.T01:CDS | 30.0% |
| AAGGTTGCTTATGTTCTTCA+AGG | + | Chr4:20469254-20469273 | MsG0480019442.01.T01:CDS | 35.0% | |
| AGGTTACTTACATTGTTAGG+GGG | + | Chr4:20470790-20470809 | MsG0480019442.01.T01:CDS | 35.0% | |
| ATGTTACCTTCACGTAACAT+AGG | - | Chr4:20469170-20469189 | None:intergenic | 35.0% | |
| ATGTTACGTGAAGGTAACAT+TGG | + | Chr4:20469170-20469189 | MsG0480019442.01.T01:CDS | 35.0% | |
| CAATTGTGTCAGTGTCATAT+CGG | - | Chr4:20469426-20469445 | None:intergenic | 35.0% | |
| CAGGTTACTTACATTGTTAG+GGG | + | Chr4:20470789-20470808 | MsG0480019442.01.T01:CDS | 35.0% | |
| GAAGGTTGTTGAAATTAAGG+AGG | + | Chr4:20470287-20470306 | MsG0480019442.01.T01:CDS | 35.0% | |
| GCAGGTTACTTACATTGTTA+GGG | + | Chr4:20470788-20470807 | MsG0480019442.01.T01:CDS | 35.0% | |
| GGAGAAAGATCAATATCCAT+AGG | - | Chr4:20469080-20469099 | None:intergenic | 35.0% | |
| GGAGTAATGACATCAATTTG+GGG | + | Chr4:20469567-20469586 | MsG0480019442.01.T01:intron | 35.0% | |
| GGTAAGAAAAACTCACTTAG+GGG | - | Chr4:20470964-20470983 | None:intergenic | 35.0% | |
| TACACTTTCTTAGCCAATTG+AGG | - | Chr4:20469101-20469120 | None:intergenic | 35.0% | |
| TAGGTACTCTGATTCTTCTA+AGG | + | Chr4:20469235-20469254 | MsG0480019442.01.T01:CDS | 35.0% | |
| TCAACCCCAAAAATCAATTG+AGG | - | Chr4:20471386-20471405 | None:intergenic | 35.0% | |
| TGATGTCATTACTCCAATTG+AGG | - | Chr4:20469562-20469581 | None:intergenic | 35.0% | |
| TGCAGGTTACTTACATTGTT+AGG | + | Chr4:20470787-20470806 | MsG0480019442.01.T01:CDS | 35.0% | |
| TGTTTCCAGTGTTTGTGTAA+GGG | + | Chr4:20469720-20469739 | MsG0480019442.01.T01:intron | 35.0% | |
| TTCAACTGAATTTGTCGGAA+GGG | + | Chr4:20470470-20470489 | MsG0480019442.01.T01:CDS | 35.0% | |
| TTGTTTCCAGTGTTTGTGTA+AGG | + | Chr4:20469719-20469738 | MsG0480019442.01.T01:intron | 35.0% | |
| TTTCAACTGAATTTGTCGGA+AGG | + | Chr4:20470469-20470488 | MsG0480019442.01.T01:CDS | 35.0% | |
| ! | AAGTTAGCTCTTCAGAAGAA+TGG | + | Chr4:20469200-20469219 | MsG0480019442.01.T01:CDS | 35.0% |
| ! | ATTCTTCTGAAGAGCTAACT+TGG | - | Chr4:20469201-20469220 | None:intergenic | 35.0% |
| ! | CAATTGGCTAAGAAAGTGTA+CGG | + | Chr4:20469101-20469120 | MsG0480019442.01.T01:CDS | 35.0% |
| ! | GAGTTGATTATTCTGTTCCT+CGG | + | Chr4:20470369-20470388 | MsG0480019442.01.T01:CDS | 35.0% |
| ! | TTAGAAGAATCAGAGTACCT+AGG | - | Chr4:20469236-20469255 | None:intergenic | 35.0% |
| ! | TTTGAGACAACGAAAAACCT+CGG | - | Chr4:20470897-20470916 | None:intergenic | 35.0% |
| ! | TTTGGGGTAAACACTTCTAA+TGG | + | Chr4:20469583-20469602 | MsG0480019442.01.T01:intron | 35.0% |
| !! | TGTTGATGGAAAGAGAGTTT+TGG | + | Chr4:20470836-20470855 | MsG0480019442.01.T01:CDS | 35.0% |
| !!! | AGTTTTGGAGACAACTTTGA+AGG | + | Chr4:20470851-20470870 | MsG0480019442.01.T01:CDS | 35.0% |
| AAAGCAGCTTGTAGAACTGT+AGG | - | Chr4:20471152-20471171 | None:intergenic | 40.0% | |
| AAAGGGATTGTGAAGCTTGA+CGG | + | Chr4:20470546-20470565 | MsG0480019442.01.T01:CDS | 40.0% | |
| AACAATGTGAAGACACTCGT+TGG | + | Chr4:20470510-20470529 | MsG0480019442.01.T01:CDS | 40.0% | |
| AAGCTTCACAATCCCTTTAG+CGG | - | Chr4:20470544-20470563 | None:intergenic | 40.0% | |
| ACAACCTTCTCTTCTGATTC+AGG | - | Chr4:20470276-20470295 | None:intergenic | 40.0% | |
| AGAAACTCTTCCGTTCAAAG+AGG | + | Chr4:20471192-20471211 | MsG0480019442.01.T01:CDS | 40.0% | |
| ATAGACCCTTACACAAACAC+TGG | - | Chr4:20469728-20469747 | None:intergenic | 40.0% | |
| ATTGAGGAACCTATGAAGCA+CGG | - | Chr4:20469546-20469565 | None:intergenic | 40.0% | |
| ATTTGGAGGAGGGAAGAAAA+TGG | - | Chr4:20471228-20471247 | None:intergenic | 40.0% | |
| CAACACCAACAACTTGAACA+CGG | - | Chr4:20470821-20470840 | None:intergenic | 40.0% | |
| CAGTCCTGTATTTACACACA+TGG | + | Chr4:20471094-20471113 | MsG0480019442.01.T01:intron | 40.0% | |
| CCTAAAGAGGAACACAAGAA+AGG | + | Chr4:20470588-20470607 | MsG0480019442.01.T01:CDS | 40.0% | |
| CCTTTCTTGTGTTCCTCTTT+AGG | - | Chr4:20470591-20470610 | None:intergenic | 40.0% | |
| CGTAACATAGGAAGTTCAGA+AGG | - | Chr4:20469158-20469177 | None:intergenic | 40.0% | |
| GAACTTCCTATGTTACGTGA+AGG | + | Chr4:20469161-20469180 | MsG0480019442.01.T01:CDS | 40.0% | |
| GGTCCTAATGGAATCTTTAC+TGG | + | Chr4:20470444-20470463 | MsG0480019442.01.T01:CDS | 40.0% | |
| TAATCATGTCAGTGTCGTGT+CGG | - | Chr4:20469464-20469483 | None:intergenic | 40.0% | |
| TCAAAGATCGCTGACAATGA+TGG | + | Chr4:20470912-20470931 | MsG0480019442.01.T01:CDS | 40.0% | |
| TCTCAAACTATTAGCGGTGT+CGG | + | Chr4:20469501-20469520 | MsG0480019442.01.T01:intron | 40.0% | |
| TGCTTCATAGGTTCCTCAAT+TGG | + | Chr4:20469546-20469565 | MsG0480019442.01.T01:intron | 40.0% | |
| ! | ACTTCAAAAGCACACAAAGC+TGG | + | Chr4:20470396-20470415 | MsG0480019442.01.T01:CDS | 40.0% |
| ! | CAAAAGTGTGCTTCATAGGA+AGG | - | Chr4:20469394-20469413 | None:intergenic | 40.0% |
| ! | GACACAAAAGTGTGCTTCAT+AGG | - | Chr4:20469398-20469417 | None:intergenic | 40.0% |
| ! | TTTTTCCTCACTGGTCCTAA+TGG | + | Chr4:20470432-20470451 | MsG0480019442.01.T01:CDS | 40.0% |
| !! | GTTCAAGTTGTTGGTGTTGA+TGG | + | Chr4:20470822-20470841 | MsG0480019442.01.T01:CDS | 40.0% |
| !!! | AGAATGGTTTTGCTGTTCCT+AGG | + | Chr4:20469216-20469235 | MsG0480019442.01.T01:CDS | 40.0% |
| AAACCAACCTCACCAACCAA+AGG | - | Chr4:20470699-20470718 | None:intergenic | 45.0% | |
| ACACATGGCTGGAAGTTCTT+CGG | + | Chr4:20471109-20471128 | MsG0480019442.01.T01:CDS | 45.0% | |
| ACCAACCAAAGGAAGGTTCT+TGG | - | Chr4:20470688-20470707 | None:intergenic | 45.0% | |
| ACCAAGAACCTTCCTTTGGT+TGG | + | Chr4:20470684-20470703 | MsG0480019442.01.T01:CDS | 45.0% | |
| ACCATGTCACAACACCAAAG+GGG | - | Chr4:20470329-20470348 | None:intergenic | 45.0% | |
| ACTTACATTGTTAGGGGGAG+TGG | + | Chr4:20470795-20470814 | MsG0480019442.01.T01:CDS | 45.0% | |
| AGAGGAACACAAGAAAGGCA+TGG | + | Chr4:20470593-20470612 | MsG0480019442.01.T01:CDS | 45.0% | |
| AGATTCCATTAGGACCAGTG+AGG | - | Chr4:20470440-20470459 | None:intergenic | 45.0% | |
| ATCTTCCGTCAATCCTCACA+AGG | - | Chr4:20470731-20470750 | None:intergenic | 45.0% | |
| CACCATGTCACAACACCAAA+GGG | - | Chr4:20470330-20470349 | None:intergenic | 45.0% | |
| CATCAGCAGTCCTCTTTGAA+CGG | - | Chr4:20471205-20471224 | None:intergenic | 45.0% | |
| CCAGCCATGTGTGTAAATAC+AGG | - | Chr4:20471101-20471120 | None:intergenic | 45.0% | |
| CCTGTATTTACACACATGGC+TGG | + | Chr4:20471098-20471117 | MsG0480019442.01.T01:CDS | 45.0% | |
| CGGAAGAGTTTCTCAACTTC+TGG | - | Chr4:20471185-20471204 | None:intergenic | 45.0% | |
| GAAATAGGAAGTGGAGTTGC+TGG | + | Chr4:20470240-20470259 | MsG0480019442.01.T01:intron | 45.0% | |
| GAACACCAAGAACCTTCCTT+TGG | + | Chr4:20470680-20470699 | MsG0480019442.01.T01:CDS | 45.0% | |
| GACATGGTGGTACAACAAAG+AGG | + | Chr4:20470341-20470360 | MsG0480019442.01.T01:CDS | 45.0% | |
| GCTACCTGAATCAGAAGAGA+AGG | + | Chr4:20470269-20470288 | MsG0480019442.01.T01:CDS | 45.0% | |
| TGAATTTGTCGGAAGGGCTT+GGG | + | Chr4:20470476-20470495 | MsG0480019442.01.T01:CDS | 45.0% | |
| TGTCAGTGTCATATCGGTGT+CGG | - | Chr4:20469420-20469439 | None:intergenic | 45.0% | |
| TTGGAAACCAGTCCGCTAAA+GGG | + | Chr4:20470529-20470548 | MsG0480019442.01.T01:CDS | 45.0% | |
| TTGTGTTCCTCTTTAGGCTG+AGG | - | Chr4:20470585-20470604 | None:intergenic | 45.0% | |
| ! | AAGAAAGTGTACGGTGGTGA+TGG | + | Chr4:20469110-20469129 | MsG0480019442.01.T01:CDS | 45.0% |
| ! | CTGACAATGATGGAATGGAG+TGG | + | Chr4:20470922-20470941 | MsG0480019442.01.T01:CDS | 45.0% |
| ! | GAGATTTGTTCATTGTGCCG+AGG | + | Chr4:20470877-20470896 | MsG0480019442.01.T01:CDS | 45.0% |
| ! | GATCGCTGACAATGATGGAA+TGG | + | Chr4:20470917-20470936 | MsG0480019442.01.T01:CDS | 45.0% |
| ! | TTGGAGACAACTTTGAAGGC+TGG | + | Chr4:20470855-20470874 | MsG0480019442.01.T01:CDS | 45.0% |
| ! | TTGGCTAAGAAAGTGTACGG+TGG | + | Chr4:20469104-20469123 | MsG0480019442.01.T01:CDS | 45.0% |
| !! | ATGGTGGATCGTACTATGCT+TGG | + | Chr4:20469129-20469148 | MsG0480019442.01.T01:CDS | 45.0% |
| !! | TTGGTTGGTGAGGTTGGTTT+AGG | + | Chr4:20470699-20470718 | MsG0480019442.01.T01:CDS | 45.0% |
| !!! | ATTTTATTAAAGTTTTTATT+TGG | + | Chr4:20469691-20469710 | MsG0480019442.01.T01:intron | 5.0% |
| AAGCCTTCCTCAGCCTAAAG+AGG | + | Chr4:20470575-20470594 | MsG0480019442.01.T01:CDS | 50.0% | |
| CAACCTCACCAACCAAAGGA+AGG | - | Chr4:20470695-20470714 | None:intergenic | 50.0% | |
| CCACCATGTCACAACACCAA+AGG | - | Chr4:20470331-20470350 | None:intergenic | 50.0% | |
| CTATGAAGCACGGACATGGA+CGG | - | Chr4:20469536-20469555 | None:intergenic | 50.0% | |
| CTCGTGTGATTCAGCTTTGC+AGG | + | Chr4:20470770-20470789 | MsG0480019442.01.T01:CDS | 50.0% | |
| CTGAATTTGTCGGAAGGGCT+TGG | + | Chr4:20470475-20470494 | MsG0480019442.01.T01:CDS | 50.0% | |
| GAACCTATGAAGCACGGACA+TGG | - | Chr4:20469540-20469559 | None:intergenic | 50.0% | |
| GATGCATTAGCACTCCCCTT+TGG | + | Chr4:20470312-20470331 | MsG0480019442.01.T01:CDS | 50.0% | |
| GCTGAATCACACGAGAATCC+AGG | - | Chr4:20470765-20470784 | None:intergenic | 50.0% | |
| GTTCCTCTTTAGGCTGAGGA+AGG | - | Chr4:20470581-20470600 | None:intergenic | 50.0% | |
| GTTGGAAACCAGTCCGCTAA+AGG | + | Chr4:20470528-20470547 | MsG0480019442.01.T01:CDS | 50.0% | |
| TCCGTCAATCCTCACAAGGT+CGG | - | Chr4:20470727-20470746 | None:intergenic | 50.0% | |
| ! | GAACCTTCCTTTGGTTGGTG+AGG | + | Chr4:20470689-20470708 | MsG0480019442.01.T01:CDS | 50.0% |
| ! | TCACAATCCCTTTAGCGGAC+TGG | - | Chr4:20470539-20470558 | None:intergenic | 50.0% |
| ! | TGGAAGTTCTTCGGTGTGGA+AGG | + | Chr4:20471118-20471137 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | AAAGTGTACGGTGGTGATGG+TGG | + | Chr4:20469113-20469132 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | AGGCATGGCTTTGAACTGTC+TGG | + | Chr4:20470608-20470627 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | AGTGGCCGTGTTCAAGTTGT+TGG | + | Chr4:20470813-20470832 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | CATGGCTTTGAACTGTCTGG+AGG | + | Chr4:20470611-20470630 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | CCTTTGGTGTTGTGACATGG+TGG | + | Chr4:20470328-20470347 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | CTTCCTTTGGTTGGTGAGGT+TGG | + | Chr4:20470693-20470712 | MsG0480019442.01.T01:CDS | 50.0% |
| !! | TCCCCTTTGGTGTTGTGACA+TGG | + | Chr4:20470325-20470344 | MsG0480019442.01.T01:CDS | 50.0% |
| !!! | GTGCTTTTGAAGTATCGCCG+AGG | - | Chr4:20470389-20470408 | None:intergenic | 50.0% |
| CGTCCATGTCCGTGCTTCAT+AGG | + | Chr4:20469534-20469553 | MsG0480019442.01.T01:intron | 55.0% | |
| GCCGACCTTGTGAGGATTGA+CGG | + | Chr4:20470723-20470742 | MsG0480019442.01.T01:CDS | 55.0% | |
| GGAAGATCCATGTGCTCTCC+TGG | + | Chr4:20470744-20470763 | MsG0480019442.01.T01:CDS | 55.0% | |
| GTTTAGGAGCCGACCTTGTG+AGG | + | Chr4:20470715-20470734 | MsG0480019442.01.T01:CDS | 55.0% | |
| TGGCTGGAAGTTCTTCGGTG+TGG | + | Chr4:20471114-20471133 | MsG0480019442.01.T01:CDS | 55.0% | |
| ! | CGAGAATCCAGGAGAGCACA+TGG | - | Chr4:20470754-20470773 | None:intergenic | 55.0% |
| ! | TGTCAGTGTCGTGTCGGTGT+TGG | - | Chr4:20469458-20469477 | None:intergenic | 55.0% |
| !! | GAACTGTCTGGAGGCACCAT+TGG | + | Chr4:20470620-20470639 | MsG0480019442.01.T01:CDS | 55.0% |
| TGTCGGAAGGGCTTGGGACT+TGG | + | Chr4:20470482-20470501 | MsG0480019442.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 20469080 | 20471408 | 20469080 | ID=MsG0480019442.01;Name=MsG0480019442.01 |
| Chr4 | mRNA | 20469080 | 20471408 | 20469080 | ID=MsG0480019442.01.T01;Parent=MsG0480019442.01;Name=MsG0480019442.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0.5|0.33|1|1|1|3|158|356 |
| Chr4 | exon | 20469080 | 20469275 | 20469080 | ID=MsG0480019442.01.T01:exon:9902;Parent=MsG0480019442.01.T01 |
| Chr4 | exon | 20470247 | 20470967 | 20470247 | ID=MsG0480019442.01.T01:exon:9903;Parent=MsG0480019442.01.T01 |
| Chr4 | exon | 20471097 | 20471408 | 20471097 | ID=MsG0480019442.01.T01:exon:9904;Parent=MsG0480019442.01.T01 |
| Chr4 | CDS | 20469080 | 20469275 | 20469080 | ID=MsG0480019442.01.T01:cds;Parent=MsG0480019442.01.T01 |
| Chr4 | CDS | 20470247 | 20470967 | 20470247 | ID=MsG0480019442.01.T01:cds;Parent=MsG0480019442.01.T01 |
| Chr4 | CDS | 20471097 | 20471250 | 20471097 | ID=MsG0480019442.01.T01:cds;Parent=MsG0480019442.01.T01 |
| Chr4 | three_prime_UTR | 20471251 | 20471408 | 20471251 | ID=MsG0480019442.01.T01:three_prime_utr;Parent=MsG0480019442.01.T01 |
| Gene Sequence |
| Protein sequence |
