AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180002686.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002686.01.T01 MTR_1g092900 53.110 209 52 4 9 171 158 366 6.67e-54 181
MsG0180002686.01.T01 MTR_1g092910 50.282 177 62 5 9 171 101 265 7.57e-41 144
MsG0180002686.01.T01 MTR_1g092910 50.282 177 62 5 9 171 137 301 1.52e-40 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180002686.01.T01 AT3G10770 38.889 126 46 5 50 171 142 240 3.94e-11 62.4
MsG0180002686.01.T01 AT3G10770 38.889 126 46 5 50 171 142 240 4.19e-11 62.4

Find 90 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTGCCTTGTCTCACATTC+TGG 0.185407 1:+43145653 None:intergenic
AGAGGAAAGAGGAATATAAT+AGG 0.231939 1:-43145730 MsG0180002686.01.T01:CDS
CCACCACCTGATGCAAGTTT+TGG 0.242164 1:-43142667 MsG0180002686.01.T01:CDS
AATTTCACGGTCCCGGAATA+TGG 0.319652 1:+43145367 None:intergenic
GTAGGTACAGGCAAAGTAAT+AGG 0.330396 1:-43145394 MsG0180002686.01.T01:CDS
GTAATAGGGTGGCCATATTC+CGG 0.334730 1:-43145379 MsG0180002686.01.T01:CDS
GTTACTCGCTGGAAGATAAA+TGG 0.363485 1:-43145602 MsG0180002686.01.T01:CDS
CAGAAGCAGACACAGACTTT+TGG 0.371064 1:-43145802 MsG0180002686.01.T01:CDS
ATTGTATAGCTCAGGCTGAT+TGG 0.378894 1:+43142603 None:intergenic
CATGGCCTATGCCCCTCATC+GGG 0.379724 1:+43142633 None:intergenic
AAGTCAAGCACAAACTTATA+TGG 0.380107 1:+43142312 None:intergenic
ATACCAGTAGGGCTAGAAAT+AGG 0.380800 1:-43145436 MsG0180002686.01.T01:CDS
ATCTTTAACTCGAGCAATAA+TGG 0.383921 1:-43145695 MsG0180002686.01.T01:CDS
TAATAGGGTGGCCATATTCC+GGG 0.399528 1:-43145378 MsG0180002686.01.T01:CDS
AGGCTGATTGGGTGCAGGCA+TGG 0.401983 1:+43142615 None:intergenic
CCTATGCCCCTCATCGGGGC+CGG 0.423556 1:+43142638 None:intergenic
TGGCATTCAGTCGTTCTTCA+AGG 0.423949 1:-43142257 MsG0180002686.01.T01:CDS
TCATAGCTTCTGTCATAATC+AGG 0.427210 1:+43145332 None:intergenic
GATTGGCCCGGCCCCGATGA+GGG 0.433404 1:-43142645 MsG0180002686.01.T01:CDS
TGTCCTATTTCTAGCCCTAC+TGG 0.433903 1:+43145433 None:intergenic
TTGTATAGCTCAGGCTGATT+GGG 0.434512 1:+43142604 None:intergenic
GCATGGCCTATGCCCCTCAT+CGG 0.437949 1:+43142632 None:intergenic
CTATGCCCCTCATCGGGGCC+GGG 0.439659 1:+43142639 None:intergenic
TTTGTGCTTGACTTGGATAA+AGG 0.439799 1:-43142303 MsG0180002686.01.T01:CDS
TGTGTCTGCTTCTGTGGCCT+CGG 0.442577 1:+43145811 None:intergenic
GTCGCCATAGCTGAGAGGTT+TGG 0.443125 1:+43146349 None:intergenic
GGCAATGCAAATTCAAACTC+AGG 0.444513 1:-43145781 MsG0180002686.01.T01:CDS
TGCGGTCAATTTCACGGTCC+CGG 0.447048 1:+43145360 None:intergenic
GATCCTTGCGGTCAATTTCA+CGG 0.447595 1:+43145354 None:intergenic
GAGGAAAGAGGAATATAATA+GGG 0.447747 1:-43145729 MsG0180002686.01.T01:CDS
AGGAGCCAGTTGGTAGGTAC+AGG 0.460319 1:-43145406 MsG0180002686.01.T01:CDS
CATTCTGGCTTCCCACCCAC+TGG 0.463898 1:+43145668 None:intergenic
CTTTGCCTGTACCTACCAAC+TGG 0.466995 1:+43145401 None:intergenic
AAAGTCTGTGTCTGCTTCTG+TGG 0.468620 1:+43145805 None:intergenic
GCCAATCCAAAACTTGCATC+AGG 0.469813 1:+43142661 None:intergenic
ATATAAGTTTGTGCTTGACT+TGG 0.475672 1:-43142310 MsG0180002686.01.T01:CDS
CATCTTACATTGTATAGCTC+AGG 0.484996 1:+43142595 None:intergenic
GGATTGGCCCGGCCCCGATG+AGG 0.486170 1:-43142646 MsG0180002686.01.T01:CDS
CCGGCCCCGATGAGGGGCAT+AGG 0.488555 1:-43142638 MsG0180002686.01.T01:CDS
AAGTGTGGAAGAGAGGAAAG+AGG 0.489811 1:-43145741 MsG0180002686.01.T01:CDS
ATTGCTCGAGTTAAAGATCC+TGG 0.492391 1:+43145700 None:intergenic
GAAGATTCACCTGCCCCTAC+TGG 0.495574 1:+43145464 None:intergenic
TTCCTCTCTGTGTTACTCGC+TGG 0.497201 1:-43145613 MsG0180002686.01.T01:CDS
TCTCAGCTATGGCGACAATT+CGG 0.501511 1:-43146342 MsG0180002686.01.T01:intron
ACGACTGAATGCCACAGTAT+AGG 0.506914 1:+43142266 None:intergenic
TAGGTACAGGCAAAGTAATA+GGG 0.509520 1:-43145393 MsG0180002686.01.T01:CDS
CCAAAACTTGCATCAGGTGG+TGG 0.511392 1:+43142667 None:intergenic
AGCTCAGGCTGATTGGGTGC+AGG 0.517657 1:+43142610 None:intergenic
AGAGGTTTGGAATGGATCCA+TGG 0.518927 1:+43146362 None:intergenic
GAAGATAAATGGCATCTGTA+GGG 0.522160 1:-43145591 MsG0180002686.01.T01:CDS
GGAAGATAAATGGCATCTGT+AGG 0.523680 1:-43145592 MsG0180002686.01.T01:CDS
AATATAATAGGGCTCGTGCC+AGG 0.523772 1:-43145718 MsG0180002686.01.T01:CDS
ATTGGCCCGGCCCCGATGAG+GGG 0.532349 1:-43142644 MsG0180002686.01.T01:CDS
ATCTTCAGCTAATACCAGTA+GGG 0.541314 1:-43145478 MsG0180002686.01.T01:intron
AATCTTCAACTAATACCAGT+AGG 0.545950 1:-43145448 MsG0180002686.01.T01:CDS
AGCAATAATGGTGGTCCAGT+GGG 0.556550 1:-43145683 MsG0180002686.01.T01:CDS
CATTCCAAACCTCTCAGCTA+TGG 0.560278 1:-43146353 MsG0180002686.01.T01:CDS
AATAATGGTGGTCCAGTGGG+TGG 0.566142 1:-43145680 MsG0180002686.01.T01:CDS
GCTCTAAAAGTGTGGAAGAG+AGG 0.572069 1:-43145748 MsG0180002686.01.T01:CDS
TTTCTGACGGCAATTTAACT+GGG 0.574299 1:+43145861 None:intergenic
CAGCTAATACCAGTAGGGGC+AGG 0.579151 1:-43145473 MsG0180002686.01.T01:CDS
AATCTTCAGCTAATACCAGT+AGG 0.580197 1:-43145479 MsG0180002686.01.T01:intron
GCAATGCAAATTCAAACTCA+GGG 0.580235 1:-43145780 MsG0180002686.01.T01:CDS
AAGATAAATGGCATCTGTAG+GGG 0.595043 1:-43145590 MsG0180002686.01.T01:CDS
GAGCAATAATGGTGGTCCAG+TGG 0.595139 1:-43145684 MsG0180002686.01.T01:CDS
ATCTTCAACTAATACCAGTA+GGG 0.608722 1:-43145447 MsG0180002686.01.T01:CDS
AGAAAACAGCTCTAAAAGTG+TGG 0.613026 1:-43145756 MsG0180002686.01.T01:CDS
CATAGCTGAGAGGTTTGGAA+TGG 0.616591 1:+43146354 None:intergenic
GCACAGGATAACTCATTGCA+TGG 0.617428 1:-43145636 MsG0180002686.01.T01:CDS
GGCTAGAAATAGGACAGAGA+AGG 0.617633 1:-43145426 MsG0180002686.01.T01:CDS
AGATAAATGGCATCTGTAGG+GGG 0.620394 1:-43145589 MsG0180002686.01.T01:CDS
GGACCGTGAAATTGACCGCA+AGG 0.621356 1:-43145357 MsG0180002686.01.T01:CDS
ATAATGGTGGTCCAGTGGGT+GGG 0.624512 1:-43145679 MsG0180002686.01.T01:CDS
GAGGTTTGGAATGGATCCAT+GGG 0.626370 1:+43146363 None:intergenic
CAGAGAAGGAGCCAGTTGGT+AGG 0.631216 1:-43145412 MsG0180002686.01.T01:CDS
AGGACAGAGAAGGAGCCAGT+TGG 0.639951 1:-43145416 MsG0180002686.01.T01:CDS
AATCCAAAACTTGCATCAGG+TGG 0.640733 1:+43142664 None:intergenic
CAGAATGTGAGACAAGGCAC+AGG 0.641802 1:-43145652 MsG0180002686.01.T01:CDS
TCTTCAGCTAATACCAGTAG+GGG 0.649305 1:-43145477 MsG0180002686.01.T01:intron
ATTATGACAGAAGCTATGAT+CGG 0.654273 1:-43145328 MsG0180002686.01.T01:intron
TGTCATAATCAGGATCCTTG+CGG 0.659931 1:+43145342 None:intergenic
GTGAAGAAAAGAGTAAATCG+AGG 0.682801 1:-43142347 MsG0180002686.01.T01:CDS
GGAAGCCAGAATGTGAGACA+AGG 0.685426 1:-43145658 MsG0180002686.01.T01:CDS
GTACAGGCAAAGTAATAGGG+TGG 0.688595 1:-43145390 MsG0180002686.01.T01:CDS
GCTTTGCTTAACCTATACTG+TGG 0.693086 1:-43142277 MsG0180002686.01.T01:CDS
ATGGCCTATGCCCCTCATCG+GGG 0.693764 1:+43142634 None:intergenic
GAATTGTCGCCATAGCTGAG+AGG 0.700515 1:+43146344 None:intergenic
TTTAACTCGAGCAATAATGG+TGG 0.704857 1:-43145692 MsG0180002686.01.T01:CDS
TTCCAGCGAGTAACACAGAG+AGG 0.717902 1:+43145611 None:intergenic
GATGAAGTTGCAATCAACCG+AGG 0.719376 1:-43145828 MsG0180002686.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATTGATAAATTTTTG+AGG - Chr1:43144630-43144649 MsG0180002686.01.T01:intron 10.0%
!!! ATATATTGATAAATTTTTGA+GGG - Chr1:43144631-43144650 MsG0180002686.01.T01:intron 10.0%
!! AAATTAGAAGAAAAAATGTT+TGG - Chr1:43145584-43145603 MsG0180002686.01.T01:intron 15.0%
!! ATAACAAGAATGTATATTAA+CGG + Chr1:43143345-43143364 None:intergenic 15.0%
!! ATACTAATTTACATTTACAT+TGG + Chr1:43144277-43144296 None:intergenic 15.0%
!! ATCTTGATAAAATAAAGTTT+AGG + Chr1:43145247-43145266 None:intergenic 15.0%
!! TATACTCATCTTAAAATATA+TGG + Chr1:43144529-43144548 None:intergenic 15.0%
!!! ATATTTTAAGATGAGTATAT+TGG - Chr1:43144530-43144549 MsG0180002686.01.T01:intron 15.0%
!!! ATTTATTTTATTAGAAGTTG+AGG + Chr1:43145438-43145457 None:intergenic 15.0%
!!! TTTATTTTATTAGAAGTTGA+GGG + Chr1:43145437-43145456 None:intergenic 15.0%
!! AAACTATTTATTTGAGAAAG+GGG + Chr1:43143374-43143393 None:intergenic 20.0%
!! AATCTAAACAACAAACTAAA+AGG + Chr1:43142422-43142441 None:intergenic 20.0%
!! AGCAAAAATTTGACAAATTA+AGG + Chr1:43145822-43145841 None:intergenic 20.0%
!! ATAAATATTAAGAGGAGATA+TGG - Chr1:43144765-43144784 MsG0180002686.01.T01:intron 20.0%
!! ATCTAAACAACAAACTAAAA+GGG + Chr1:43142421-43142440 None:intergenic 20.0%
!! ATTTGACAAATTAAGGAAAT+AGG + Chr1:43145815-43145834 None:intergenic 20.0%
!! CAAACTATTTATTTGAGAAA+GGG + Chr1:43143375-43143394 None:intergenic 20.0%
!! CAAAGAAATATGTTACAAAA+AGG + Chr1:43143536-43143555 None:intergenic 20.0%
!! TAACTATGAAGAAATATGAT+AGG + Chr1:43144070-43144089 None:intergenic 20.0%
!! TAGTTAGTATAATGAAAAGA+TGG + Chr1:43145293-43145312 None:intergenic 20.0%
!! TATTATAGTAAATACTTCTG+TGG - Chr1:43144302-43144321 MsG0180002686.01.T01:intron 20.0%
!! TCAAACTATTTATTTGAGAA+AGG + Chr1:43143376-43143395 None:intergenic 20.0%
!! TTATTTGTTCTATGATATTC+TGG - Chr1:43145654-43145673 MsG0180002686.01.T01:CDS 20.0%
!! TTTGACAAATTAAGGAAATA+GGG + Chr1:43145814-43145833 None:intergenic 20.0%
!!! CACAAATATTTAGTTTACAA+AGG + Chr1:43144211-43144230 None:intergenic 20.0%
!!! TTGAATGAGTAATTGATAAT+TGG - Chr1:43143734-43143753 MsG0180002686.01.T01:intron 20.0%
! AAGCTCTTTAATCAAAAAAG+AGG - Chr1:43145622-43145641 MsG0180002686.01.T01:CDS 25.0%
! CAAGATTTCATCTAAATCAT+AGG + Chr1:43144011-43144030 None:intergenic 25.0%
! CTTAAAATATATGGTGCAAA+AGG + Chr1:43144520-43144539 None:intergenic 25.0%
! GAATCAACAAATCAAATATG+CGG + Chr1:43145771-43145790 None:intergenic 25.0%
! TAGAAGAAAAAATGTTTGGT+TGG - Chr1:43145588-43145607 MsG0180002686.01.T01:CDS 25.0%
! TGAAAATATTAACCAACATG+TGG + Chr1:43143474-43143493 None:intergenic 25.0%
!! AAAATTTTGAATAGTCTCCA+TGG - Chr1:43144673-43144692 MsG0180002686.01.T01:intron 25.0%
!! AATAACTTGTAAATGTGCAT+AGG + Chr1:43143655-43143674 None:intergenic 25.0%
!! GGGAAAAAATTGTTTTCAAT+TGG + Chr1:43143562-43143581 None:intergenic 25.0%
!! TGGACATTTGATATTTTATG+AGG - Chr1:43146210-43146229 MsG0180002686.01.T01:intron 25.0%
!!! ATTGAAAACAATTTTTTCCC+CGG - Chr1:43143562-43143581 MsG0180002686.01.T01:intron 25.0%
!!! CTTTGATTTATCCAGTTTTA+CGG - Chr1:43142499-43142518 MsG0180002686.01.T01:intron 25.0%
!!! CTTTTCTAGCATATGTATTT+GGG + Chr1:43144587-43144606 None:intergenic 25.0%
!!! GACTTTTTTAAGTAATACAC+TGG - Chr1:43143844-43143863 MsG0180002686.01.T01:intron 25.0%
!!! TCTTTTCTAGCATATGTATT+TGG + Chr1:43144588-43144607 None:intergenic 25.0%
AAATGCATCACTCATAATAG+GGG + Chr1:43143320-43143339 None:intergenic 30.0%
AAGTCAAGCACAAACTTATA+TGG + Chr1:43146299-43146318 None:intergenic 30.0%
AATCTTCAACTAATACCAGT+AGG - Chr1:43143049-43143068 MsG0180002686.01.T01:intron 30.0%
ACAAATGCATCACTCATAAT+AGG + Chr1:43143322-43143341 None:intergenic 30.0%
ACTGGATAACAATTGTTTAC+CGG - Chr1:43142653-43142672 MsG0180002686.01.T01:CDS 30.0%
AGAGGAAAGAGGAATATAAT+AGG - Chr1:43142878-43142897 MsG0180002686.01.T01:intron 30.0%
AGATCTTAGTGAAAAGCTAA+AGG + Chr1:43145881-43145900 None:intergenic 30.0%
AGCATATGTATTTGGGAATA+TGG + Chr1:43144580-43144599 None:intergenic 30.0%
AGCTATACAATGTAAGATGA+TGG - Chr1:43146017-43146036 MsG0180002686.01.T01:intron 30.0%
ATATAAGTTTGTGCTTGACT+TGG - Chr1:43146298-43146317 MsG0180002686.01.T01:intron 30.0%
ATATTAAGAGGAGATATGGT+TGG - Chr1:43144769-43144788 MsG0180002686.01.T01:intron 30.0%
ATCTTCAACTAATACCAGTA+GGG - Chr1:43143050-43143069 MsG0180002686.01.T01:intron 30.0%
ATCTTTAACTCGAGCAATAA+TGG - Chr1:43142913-43142932 MsG0180002686.01.T01:intron 30.0%
ATTATGACAGAAGCTATGAT+CGG - Chr1:43143280-43143299 MsG0180002686.01.T01:intron 30.0%
CAAATGCATCACTCATAATA+GGG + Chr1:43143321-43143340 None:intergenic 30.0%
CAGTATGTTATTGACAATTC+TGG - Chr1:43143966-43143985 MsG0180002686.01.T01:intron 30.0%
CCAACTTGATTAGGATTAAA+TGG + Chr1:43145082-43145101 None:intergenic 30.0%
CCATTTAATCCTAATCAAGT+TGG - Chr1:43145079-43145098 MsG0180002686.01.T01:intron 30.0%
CTATAAGAAATTAGACACCA+TGG + Chr1:43144693-43144712 None:intergenic 30.0%
GAGGAAAGAGGAATATAATA+GGG - Chr1:43142879-43142898 MsG0180002686.01.T01:intron 30.0%
GCATATGTATTTGGGAATAT+GGG + Chr1:43144579-43144598 None:intergenic 30.0%
GGATAACAGTTAAAACTCAT+TGG + Chr1:43144256-43144275 None:intergenic 30.0%
GTTAGAAAAAAGTTGAAGAG+AGG - Chr1:43144167-43144186 MsG0180002686.01.T01:intron 30.0%
TAGTACAAGTGTTCAAATAG+AGG - Chr1:43143869-43143888 MsG0180002686.01.T01:intron 30.0%
TATAGATTTGATCCTGGATT+TGG - Chr1:43144836-43144855 MsG0180002686.01.T01:intron 30.0%
TCAGTGTTGTAATTCACAAT+CGG + Chr1:43144901-43144920 None:intergenic 30.0%
TGCTAACAATAATTCTTGAC+CGG + Chr1:43142685-43142704 None:intergenic 30.0%
TTGTAGAAATCAGAAATCAC+TGG + Chr1:43144473-43144492 None:intergenic 30.0%
! GATATTTTATGAGGAGCTTT+TGG - Chr1:43146219-43146238 MsG0180002686.01.T01:intron 30.0%
! TATTGGAATATACTCTGAAG+AGG - Chr1:43144547-43144566 MsG0180002686.01.T01:intron 30.0%
AAAAGGCTGGTGAATATGTT+CGG + Chr1:43145180-43145199 None:intergenic 35.0%
AACCAACATGTGGTCTAAAT+AGG + Chr1:43143464-43143483 None:intergenic 35.0%
AACGGTTGTAATAGGCATTT+AGG - Chr1:43145407-43145426 MsG0180002686.01.T01:CDS 35.0%
AACTTGACTTCTCCATAGAT+TGG - Chr1:43144357-43144376 MsG0180002686.01.T01:intron 35.0%
AAGATAAATGGCATCTGTAG+GGG - Chr1:43143018-43143037 MsG0180002686.01.T01:intron 35.0%
AATCTTCAGCTAATACCAGT+AGG - Chr1:43143129-43143148 MsG0180002686.01.T01:intron 35.0%
ACAGTTGAAGAAGACAAACA+TGG - Chr1:43145373-43145392 MsG0180002686.01.T01:CDS 35.0%
ACCATTGTCAAGTGCAAAAA+AGG + Chr1:43145730-43145749 None:intergenic 35.0%
AGGATTAAATGGTGACTTCA+TGG + Chr1:43145071-43145090 None:intergenic 35.0%
ATATGTTCGGGATGGATAAA+AGG + Chr1:43145167-43145186 None:intergenic 35.0%
ATCACTCATAATAGGGGAAA+AGG + Chr1:43143314-43143333 None:intergenic 35.0%
ATCTTCAGCTAATACCAGTA+GGG - Chr1:43143130-43143149 MsG0180002686.01.T01:intron 35.0%
CATCTTACATTGTATAGCTC+AGG + Chr1:43146016-43146035 None:intergenic 35.0%
CTCGTGTAACTTATCAAATC+TGG - Chr1:43144387-43144406 MsG0180002686.01.T01:intron 35.0%
GAAGATAAATGGCATCTGTA+GGG - Chr1:43143017-43143036 MsG0180002686.01.T01:intron 35.0%
GAGTGTATACCAACTTGATT+AGG + Chr1:43145091-43145110 None:intergenic 35.0%
GATAACAATTGTTTACCGGA+TGG - Chr1:43142657-43142676 MsG0180002686.01.T01:CDS 35.0%
GATAGGTATAGATTTGATCC+TGG - Chr1:43144830-43144849 MsG0180002686.01.T01:intron 35.0%
GATGAATGCAAAACATGTTG+AGG + Chr1:43145116-43145135 None:intergenic 35.0%
GCAATGCAAATTCAAACTCA+GGG - Chr1:43142828-43142847 MsG0180002686.01.T01:intron 35.0%
GCATTATTCATTGCAGTCAA+TGG - Chr1:43142626-43142645 MsG0180002686.01.T01:CDS 35.0%
GGGTAAAACACAAACATAGA+CGG + Chr1:43145794-43145813 None:intergenic 35.0%
GGTAAAACACAAACATAGAC+GGG + Chr1:43145793-43145812 None:intergenic 35.0%
GTGAAGAAAAGAGTAAATCG+AGG - Chr1:43146261-43146280 MsG0180002686.01.T01:intron 35.0%
TAAATTCAAGCTCTGTGATG+AGG + Chr1:43142558-43142577 None:intergenic 35.0%
TAGGTACAGGCAAAGTAATA+GGG - Chr1:43143215-43143234 MsG0180002686.01.T01:intron 35.0%
TCAAATATGCGGTATGAATG+AGG + Chr1:43145760-43145779 None:intergenic 35.0%
TCAATTTGAAAAACAGCCTG+CGG - Chr1:43142367-43142386 MsG0180002686.01.T01:CDS 35.0%
TCATAGCTTCTGTCATAATC+AGG + Chr1:43143279-43143298 None:intergenic 35.0%
TCTTCAACTAATACCAGTAG+GGG - Chr1:43143051-43143070 MsG0180002686.01.T01:intron 35.0%
TGATAAGTTACACGAGACTT+CGG + Chr1:43144383-43144402 None:intergenic 35.0%
TGTCTATCCAAATTCGTCAT+AGG + Chr1:43143614-43143633 None:intergenic 35.0%
TTCCAACATCCTATTAAGGT+TGG - Chr1:43142584-43142603 MsG0180002686.01.T01:intron 35.0%
TTCCTATTTAGACCACATGT+TGG - Chr1:43143459-43143478 MsG0180002686.01.T01:intron 35.0%
TTGTTCTATGATATTCTGGC+TGG - Chr1:43145658-43145677 MsG0180002686.01.T01:CDS 35.0%
TTTAACTCGAGCAATAATGG+TGG - Chr1:43142916-43142935 MsG0180002686.01.T01:intron 35.0%
TTTCTGACGGCAATTTAACT+GGG + Chr1:43142750-43142769 None:intergenic 35.0%
! ATCACAGCATTGTTTTCTGA+CGG + Chr1:43142763-43142782 None:intergenic 35.0%
! GAATATACTCTGAAGAGGAA+GGG - Chr1:43144552-43144571 MsG0180002686.01.T01:intron 35.0%
! TTTTATTAGAAGTTGAGGGC+TGG + Chr1:43145433-43145452 None:intergenic 35.0%
! TTTTCTGACGGCAATTTAAC+TGG + Chr1:43142751-43142770 None:intergenic 35.0%
!! AGAAAACAGCTCTAAAAGTG+TGG - Chr1:43142852-43142871 MsG0180002686.01.T01:intron 35.0%
!! ATTGCAGTCAATGGTTTTAC+TGG - Chr1:43142635-43142654 MsG0180002686.01.T01:CDS 35.0%
!! TTTGTGCTTGACTTGGATAA+AGG - Chr1:43146305-43146324 MsG0180002686.01.T01:intron 35.0%
!!! ACCTTTTTTGCACTTGACAA+TGG - Chr1:43145726-43145745 MsG0180002686.01.T01:CDS 35.0%
!!! TTTTTTGCACTTGACAATGG+TGG - Chr1:43145729-43145748 MsG0180002686.01.T01:CDS 35.0%
AAACATAGTCATGGTGCTCA+TGG + Chr1:43146184-43146203 None:intergenic 40.0%
AAAGGCTGGTGAATATGTTC+GGG + Chr1:43145179-43145198 None:intergenic 40.0%
AACATGGAATCTGACGACAA+CGG - Chr1:43145389-43145408 MsG0180002686.01.T01:CDS 40.0%
AAGATCCAATCCTCTCATCT+CGG - Chr1:43146132-43146151 MsG0180002686.01.T01:intron 40.0%
AAGTTGAAGAGAGGAACACA+AGG - Chr1:43144176-43144195 MsG0180002686.01.T01:intron 40.0%
AATCCAAAACTTGCATCAGG+TGG + Chr1:43145947-43145966 None:intergenic 40.0%
AATGGTGACTTCATGGTTTC+TGG + Chr1:43145064-43145083 None:intergenic 40.0%
AATTGTTTACCGGATGGTTC+CGG - Chr1:43142663-43142682 MsG0180002686.01.T01:CDS 40.0%
ACAGATCTCTTTCAGCTGAT+TGG - Chr1:43146052-43146071 MsG0180002686.01.T01:intron 40.0%
AGAGAGAAAAACAGAACGAG+GGG - Chr1:43144143-43144162 MsG0180002686.01.T01:intron 40.0%
AGAGAGAGAAAAACAGAACG+AGG - Chr1:43144141-43144160 MsG0180002686.01.T01:intron 40.0%
AGATAAATGGCATCTGTAGG+GGG - Chr1:43143019-43143038 MsG0180002686.01.T01:intron 40.0%
AGCCAACCTTAATAGGATGT+TGG + Chr1:43142589-43142608 None:intergenic 40.0%
ATAAGCAGCAGCTGCTAAAA+AGG + Chr1:43145846-43145865 None:intergenic 40.0%
ATACCAGTAGGGCTAGAAAT+AGG - Chr1:43143172-43143191 MsG0180002686.01.T01:intron 40.0%
ATTCACAATCGGAGCTACAT+TGG + Chr1:43144890-43144909 None:intergenic 40.0%
ATTGCTCGAGTTAAAGATCC+TGG + Chr1:43142911-43142930 None:intergenic 40.0%
ATTGTATAGCTCAGGCTGAT+TGG + Chr1:43146008-43146027 None:intergenic 40.0%
ATTTAACTGGGATGTCTGCA+AGG + Chr1:43142738-43142757 None:intergenic 40.0%
CACTAGAATGCTGTAGCATA+GGG - Chr1:43143892-43143911 MsG0180002686.01.T01:intron 40.0%
CAGCTTCCAACATCCTATTA+AGG - Chr1:43142580-43142599 MsG0180002686.01.T01:intron 40.0%
CAGTATGTGATTGACAACAC+TGG - Chr1:43143939-43143958 MsG0180002686.01.T01:intron 40.0%
CCACAAGAGAAACATAGTCA+TGG + Chr1:43146193-43146212 None:intergenic 40.0%
CCATGACTATGTTTCTCTTG+TGG - Chr1:43146190-43146209 MsG0180002686.01.T01:intron 40.0%
CTTCAACTAATACCAGTAGG+GGG - Chr1:43143052-43143071 MsG0180002686.01.T01:intron 40.0%
GAGAGAGAAAAACAGAACGA+GGG - Chr1:43144142-43144161 MsG0180002686.01.T01:intron 40.0%
GCTTTGCTTAACCTATACTG+TGG - Chr1:43146331-43146350 MsG0180002686.01.T01:intron 40.0%
GGAAGATAAATGGCATCTGT+AGG - Chr1:43143016-43143035 MsG0180002686.01.T01:intron 40.0%
GGATTTCTCTTTGGTTGAAC+AGG - Chr1:43142388-43142407 MsG0180002686.01.T01:intron 40.0%
GGCAATGCAAATTCAAACTC+AGG - Chr1:43142827-43142846 MsG0180002686.01.T01:intron 40.0%
GGTTTAGCCTATGACGAATT+TGG - Chr1:43143604-43143623 MsG0180002686.01.T01:intron 40.0%
GTAGGTACAGGCAAAGTAAT+AGG - Chr1:43143214-43143233 MsG0180002686.01.T01:intron 40.0%
GTTACTCGCTGGAAGATAAA+TGG - Chr1:43143006-43143025 MsG0180002686.01.T01:intron 40.0%
TAGTATAGATCCTGTGCACA+TGG - Chr1:43145531-43145550 MsG0180002686.01.T01:intron 40.0%
TATATCAGGGCAGCATATTC+AGG - Chr1:43144992-43145011 MsG0180002686.01.T01:intron 40.0%
TCTTCAGCTAATACCAGTAG+GGG - Chr1:43143131-43143150 MsG0180002686.01.T01:intron 40.0%
TCTTGTTCGATCCGTAAAAC+TGG + Chr1:43142513-43142532 None:intergenic 40.0%
TGATTGGAGTGTAGGCATAT+AGG - Chr1:43146068-43146087 MsG0180002686.01.T01:intron 40.0%
TGTCATAATCAGGATCCTTG+CGG + Chr1:43143269-43143288 None:intergenic 40.0%
TTGTATAGCTCAGGCTGATT+GGG + Chr1:43146007-43146026 None:intergenic 40.0%
! ATTCTGCTAACTTGCACGAT+AGG - Chr1:43144813-43144832 MsG0180002686.01.T01:intron 40.0%
! GGAATATACTCTGAAGAGGA+AGG - Chr1:43144551-43144570 MsG0180002686.01.T01:intron 40.0%
! TTTTCCTGCGAGACTAATGA+AGG - Chr1:43142470-43142489 MsG0180002686.01.T01:intron 40.0%
!! GATGGATAAAAGGCATTCCA+GGG + Chr1:43145157-43145176 None:intergenic 40.0%
!!! ACCTGATGCAAGTTTTGGAT+TGG - Chr1:43145946-43145965 MsG0180002686.01.T01:intron 40.0%
AAAGTCTGTGTCTGCTTCTG+TGG + Chr1:43142806-43142825 None:intergenic 45.0%
AAATCCATTCCAGCCCAACT+CGG + Chr1:43146094-43146113 None:intergenic 45.0%
AACACTGAGTTTCCACAGCT+TGG - Chr1:43144913-43144932 MsG0180002686.01.T01:intron 45.0%
AAGTGTGGAAGAGAGGAAAG+AGG - Chr1:43142867-43142886 MsG0180002686.01.T01:intron 45.0%
AATATAATAGGGCTCGTGCC+AGG - Chr1:43142890-43142909 MsG0180002686.01.T01:intron 45.0%
AATTCTTGACCGGAACCATC+CGG + Chr1:43142675-43142694 None:intergenic 45.0%
AATTTCACGGTCCCGGAATA+TGG + Chr1:43143244-43143263 None:intergenic 45.0%
ACACCTGCTGGAATTGGATA+TGG - Chr1:43145034-43145053 MsG0180002686.01.T01:intron 45.0%
ACGACTGAATGCCACAGTAT+AGG + Chr1:43146345-43146364 None:intergenic 45.0%
AGCAATAATGGTGGTCCAGT+GGG - Chr1:43142925-43142944 MsG0180002686.01.T01:intron 45.0%
AGGAATGAGAAGTGGTAACC+GGG + Chr1:43143583-43143602 None:intergenic 45.0%
ATGAATAATGCTGAGCCACC+CGG + Chr1:43142617-43142636 None:intergenic 45.0%
ATGTCTGCAAGGCGAATAAC+AGG + Chr1:43142727-43142746 None:intergenic 45.0%
ATTCGTCATAGGCTAAACCC+AGG + Chr1:43143603-43143622 None:intergenic 45.0%
CAATCAACACCTGCTGGAAT+TGG - Chr1:43145028-43145047 MsG0180002686.01.T01:intron 45.0%
CAGGAATGAGAAGTGGTAAC+CGG + Chr1:43143584-43143603 None:intergenic 45.0%
CATAGCTGAGAGGTTTGGAA+TGG + Chr1:43142257-43142276 None:intergenic 45.0%
CATTCCAAACCTCTCAGCTA+TGG - Chr1:43142255-43142274 MsG0180002686.01.T01:CDS 45.0%
CTAAACCCAGGAATGAGAAG+TGG + Chr1:43143591-43143610 None:intergenic 45.0%
CTGACGACAACGGTTGTAAT+AGG - Chr1:43145399-43145418 MsG0180002686.01.T01:CDS 45.0%
CTTTCAGCTGATTGGAGTGT+AGG - Chr1:43146060-43146079 MsG0180002686.01.T01:intron 45.0%
GAAAACCGAGATGAGAGGAT+TGG + Chr1:43146140-43146159 None:intergenic 45.0%
GATCCTTGCGGTCAATTTCA+CGG + Chr1:43143257-43143276 None:intergenic 45.0%
GATGAAGTTGCAATCAACCG+AGG - Chr1:43142780-43142799 MsG0180002686.01.T01:intron 45.0%
GCACAGGATAACTCATTGCA+TGG - Chr1:43142972-43142991 MsG0180002686.01.T01:intron 45.0%
GCACTAGAATGCTGTAGCAT+AGG - Chr1:43143891-43143910 MsG0180002686.01.T01:intron 45.0%
GCCAATCCAAAACTTGCATC+AGG + Chr1:43145950-43145969 None:intergenic 45.0%
GGCAGCATATTCAGGAACTT+GGG - Chr1:43145000-43145019 MsG0180002686.01.T01:intron 45.0%
GGCTAGAAATAGGACAGAGA+AGG - Chr1:43143182-43143201 MsG0180002686.01.T01:intron 45.0%
GGTTACCACTTCTCATTCCT+GGG - Chr1:43143583-43143602 MsG0180002686.01.T01:intron 45.0%
GTAATAGGGTGGCCATATTC+CGG - Chr1:43143229-43143248 MsG0180002686.01.T01:intron 45.0%
GTACAGGCAAAGTAATAGGG+TGG - Chr1:43143218-43143237 MsG0180002686.01.T01:intron 45.0%
TAATAGGGTGGCCATATTCC+GGG - Chr1:43143230-43143249 MsG0180002686.01.T01:intron 45.0%
TCAACCAAAGAGAAATCCGC+AGG + Chr1:43142386-43142405 None:intergenic 45.0%
TCTCAGCTATGGCGACAATT+CGG - Chr1:43142266-43142285 MsG0180002686.01.T01:CDS 45.0%
TGAAGAGAGGAACACAAGGA+TGG - Chr1:43144180-43144199 MsG0180002686.01.T01:intron 45.0%
TGGCATTCAGTCGTTCTTCA+AGG - Chr1:43146351-43146370 MsG0180002686.01.T01:CDS 45.0%
TGTCCATATCCAATTCCAGC+AGG + Chr1:43145040-43145059 None:intergenic 45.0%
! CAGAAGCAGACACAGACTTT+TGG - Chr1:43142806-43142825 MsG0180002686.01.T01:intron 45.0%
! GATCCTGGATTTGGAGTCAA+TGG - Chr1:43144845-43144864 MsG0180002686.01.T01:intron 45.0%
! TACACCTTCATTAGTCTCGC+AGG + Chr1:43142477-43142496 None:intergenic 45.0%
! TATTAAGGTTGGCTGCACAC+CGG - Chr1:43142595-43142614 MsG0180002686.01.T01:intron 45.0%
! TATTCACCAGCCTTTTGCAC+AGG - Chr1:43145184-43145203 MsG0180002686.01.T01:intron 45.0%
!! ACCAGTAGGGCTAGTTGAAT+AGG - Chr1:43143063-43143082 MsG0180002686.01.T01:intron 45.0%
!! AGTAGGGCTAGTTGAATAGG+GGG - Chr1:43143066-43143085 MsG0180002686.01.T01:intron 45.0%
!! ATTCCAGCAGGTGTTGATTG+TGG + Chr1:43145028-43145047 None:intergenic 45.0%
!! CAGTAGGGCTAGTTGAATAG+GGG - Chr1:43143065-43143084 MsG0180002686.01.T01:intron 45.0%
!! CCAGTAGGGCTAGTTGAATA+GGG - Chr1:43143064-43143083 MsG0180002686.01.T01:intron 45.0%
!! GCTCTAAAAGTGTGGAAGAG+AGG - Chr1:43142860-43142879 MsG0180002686.01.T01:intron 45.0%
!! GCTGGTGTTATTAGTCGTTG+AGG - Chr1:43145676-43145695 MsG0180002686.01.T01:CDS 45.0%
!! GGATGGATAAAAGGCATTCC+AGG + Chr1:43145158-43145177 None:intergenic 45.0%
!! TGTCCTATTTCTAGCCCTAC+TGG + Chr1:43143178-43143197 None:intergenic 45.0%
!!! ATGCAAGTTTTGGATTGGCC+CGG - Chr1:43145951-43145970 MsG0180002686.01.T01:intron 45.0%
!! AATAAACAAAAAAAAAAAAT+TGG - Chr1:43142308-43142327 MsG0180002686.01.T01:CDS 5.0%
!! TAAAATTAATAAATATTAAG+AGG - Chr1:43144757-43144776 MsG0180002686.01.T01:intron 5.0%
AACTAATACCAGTAGGGGGC+TGG - Chr1:43143103-43143122 MsG0180002686.01.T01:intron 50.0%
AATAATGGTGGTCCAGTGGG+TGG - Chr1:43142928-43142947 MsG0180002686.01.T01:intron 50.0%
ACAGCCTGCGGATTTCTCTT+TGG - Chr1:43142379-43142398 MsG0180002686.01.T01:intron 50.0%
ACGAGACTTCGGCCAATCTA+TGG + Chr1:43144372-43144391 None:intergenic 50.0%
ATAATGGTGGTCCAGTGGGT+GGG - Chr1:43142929-43142948 MsG0180002686.01.T01:intron 50.0%
CAGAATGTGAGACAAGGCAC+AGG - Chr1:43142956-43142975 MsG0180002686.01.T01:intron 50.0%
CCAAAACTTGCATCAGGTGG+TGG + Chr1:43145944-43145963 None:intergenic 50.0%
CCCTATTCAACTAGCCCTAC+TGG + Chr1:43143067-43143086 None:intergenic 50.0%
CCTATACCTGTGCAAAAGGC+TGG + Chr1:43145193-43145212 None:intergenic 50.0%
CCTTCGAAAACCGAGATGAG+AGG + Chr1:43146145-43146164 None:intergenic 50.0%
CGGTTACCACTTCTCATTCC+TGG - Chr1:43143582-43143601 MsG0180002686.01.T01:intron 50.0%
CTCTCCCGCAGCATATATCA+GGG - Chr1:43144979-43144998 MsG0180002686.01.T01:intron 50.0%
CTGTGCCTTGTCTCACATTC+TGG + Chr1:43142958-43142977 None:intergenic 50.0%
CTTTGCCTGTACCTACCAAC+TGG + Chr1:43143210-43143229 None:intergenic 50.0%
GAATTGTCGCCATAGCTGAG+AGG + Chr1:43142267-43142286 None:intergenic 50.0%
GAGCAATAATGGTGGTCCAG+TGG - Chr1:43142924-43142943 MsG0180002686.01.T01:intron 50.0%
GCTGCCTATACCTGTGCAAA+AGG + Chr1:43145197-43145216 None:intergenic 50.0%
GCTGGTGAATATGTTCGGGA+TGG + Chr1:43145175-43145194 None:intergenic 50.0%
GGAAGCCAGAATGTGAGACA+AGG - Chr1:43142950-43142969 MsG0180002686.01.T01:intron 50.0%
GGAATGAGAAGTGGTAACCG+GGG + Chr1:43143582-43143601 None:intergenic 50.0%
GGGCAGCATATTCAGGAACT+TGG - Chr1:43144999-43145018 MsG0180002686.01.T01:intron 50.0%
GGTGTGCAGCCAACCTTAAT+AGG + Chr1:43142596-43142615 None:intergenic 50.0%
GTAGGCATATAGGCCGAGTT+GGG - Chr1:43146078-43146097 MsG0180002686.01.T01:intron 50.0%
GTTCCACAATCAACACCTGC+TGG - Chr1:43145022-43145041 MsG0180002686.01.T01:intron 50.0%
TCATGATGCACCATGTGCAC+AGG + Chr1:43145544-43145563 None:intergenic 50.0%
TGCTGCCCTGATATATGCTG+CGG + Chr1:43144987-43145006 None:intergenic 50.0%
TGTAGGCATATAGGCCGAGT+TGG - Chr1:43146077-43146096 MsG0180002686.01.T01:intron 50.0%
TTCCAGCGAGTAACACAGAG+AGG + Chr1:43143000-43143019 None:intergenic 50.0%
! ATTAAGGTTGGCTGCACACC+GGG - Chr1:43142596-43142615 MsG0180002686.01.T01:intron 50.0%
! CCACCACCTGATGCAAGTTT+TGG - Chr1:43145941-43145960 MsG0180002686.01.T01:intron 50.0%
! CCAGCCTTTTGCACAGGTAT+AGG - Chr1:43145190-43145209 MsG0180002686.01.T01:intron 50.0%
! CCTCTCATCTCGGTTTTCGA+AGG - Chr1:43146142-43146161 MsG0180002686.01.T01:intron 50.0%
! CCTGGATTTGGAGTCAATGG+AGG - Chr1:43144848-43144867 MsG0180002686.01.T01:intron 50.0%
! GGAGCTACATTGGCTGCATT+GGG + Chr1:43144880-43144899 None:intergenic 50.0%
! TTCCTCTCTGTGTTACTCGC+TGG - Chr1:43142995-43143014 MsG0180002686.01.T01:intron 50.0%
!! CCTCCATTGACTCCAAATCC+AGG + Chr1:43144851-43144870 None:intergenic 50.0%
AAATGGCATCTGTAGGGGGC+TGG - Chr1:43143023-43143042 MsG0180002686.01.T01:intron 55.0%
AGATTCAACCAGCCCCCTAC+TGG + Chr1:43143034-43143053 None:intergenic 55.0%
AGGACAGAGAAGGAGCCAGT+TGG - Chr1:43143192-43143211 MsG0180002686.01.T01:intron 55.0%
CAGAGAAGGAGCCAGTTGGT+AGG - Chr1:43143196-43143215 MsG0180002686.01.T01:intron 55.0%
CAGCTAATACCAGTAGGGGC+AGG - Chr1:43143135-43143154 MsG0180002686.01.T01:intron 55.0%
CAGTATCCTTGTCAGCACCC+TGG - Chr1:43145137-43145156 MsG0180002686.01.T01:intron 55.0%
CCTCTCCCGCAGCATATATC+AGG - Chr1:43144978-43144997 MsG0180002686.01.T01:intron 55.0%
CCTGATATATGCTGCGGGAG+AGG + Chr1:43144981-43145000 None:intergenic 55.0%
GAAGATTCACCTGCCCCTAC+TGG + Chr1:43143147-43143166 None:intergenic 55.0%
GATCCGCAGAACACCAACCA+CGG - Chr1:43144955-43144974 MsG0180002686.01.T01:intron 55.0%
GCTGCCCTGATATATGCTGC+GGG + Chr1:43144986-43145005 None:intergenic 55.0%
GGACCGTGAAATTGACCGCA+AGG - Chr1:43143251-43143270 MsG0180002686.01.T01:intron 55.0%
GGCTGATGAGACTGCAGATC+AGG + Chr1:43145923-43145942 None:intergenic 55.0%
GTCGCCATAGCTGAGAGGTT+TGG + Chr1:43142262-43142281 None:intergenic 55.0%
TGCGGTCAATTTCACGGTCC+CGG + Chr1:43143251-43143270 None:intergenic 55.0%
TGTGTCTGCTTCTGTGGCCT+CGG + Chr1:43142800-43142819 None:intergenic 55.0%
! CGGAGCTACATTGGCTGCAT+TGG + Chr1:43144881-43144900 None:intergenic 55.0%
! TTGGTGTTCTGCGGATCGCT+GGG + Chr1:43144952-43144971 None:intergenic 55.0%
!! AGGAGCCAGTTGGTAGGTAC+AGG - Chr1:43143202-43143221 MsG0180002686.01.T01:intron 55.0%
AGCTCAGGCTGATTGGGTGC+AGG + Chr1:43146001-43146020 None:intergenic 60.0%
AGGCTGATTGGGTGCAGGCA+TGG + Chr1:43145996-43146015 None:intergenic 60.0%
ATGGCCTATGCCCCTCATCG+GGG + Chr1:43145977-43145996 None:intergenic 60.0%
CATGGCCTATGCCCCTCATC+GGG + Chr1:43145978-43145997 None:intergenic 60.0%
CCACAGCTTGGATCCCCTCA+TGG - Chr1:43144925-43144944 MsG0180002686.01.T01:intron 60.0%
CCATGAGGGGATCCAAGCTG+TGG + Chr1:43144928-43144947 None:intergenic 60.0%
GCATGGCCTATGCCCCTCAT+CGG + Chr1:43145979-43145998 None:intergenic 60.0%
TGGTGTTCTGCGGATCGCTG+GGG + Chr1:43144951-43144970 None:intergenic 60.0%
! AGGCCGTGGTTGGTGTTCTG+CGG + Chr1:43144961-43144980 None:intergenic 60.0%
! GCATATAGGCCGAGTTGGGC+TGG - Chr1:43146082-43146101 MsG0180002686.01.T01:intron 60.0%
! GTTGGTGTTCTGCGGATCGC+TGG + Chr1:43144953-43144972 None:intergenic 60.0%
! TAGGCCGAGTTGGGCTGGAA+TGG - Chr1:43146087-43146106 MsG0180002686.01.T01:intron 60.0%
!! CATTCTGGCTTCCCACCCAC+TGG + Chr1:43142943-43142962 None:intergenic 60.0%
!! GGCATTCCAGGGTGCTGACA+AGG + Chr1:43145146-43145165 None:intergenic 60.0%
!! GGGCTAGTTGAATAGGGGGC+TGG - Chr1:43143070-43143089 MsG0180002686.01.T01:intron 60.0%
ATATGCTGCGGGAGAGGCCG+TGG + Chr1:43144975-43144994 None:intergenic 65.0%
! AAGGTTGGCTGCACACCGGG+TGG - Chr1:43142599-43142618 MsG0180002686.01.T01:intron 65.0%
ATTGGCCCGGCCCCGATGAG+GGG - Chr1:43145964-43145983 MsG0180002686.01.T01:intron 70.0%
CCTATGCCCCTCATCGGGGC+CGG + Chr1:43145973-43145992 None:intergenic 70.0%
CGGATCGCTGGGGCCATGAG+GGG + Chr1:43144941-43144960 None:intergenic 70.0%
CTATGCCCCTCATCGGGGCC+GGG + Chr1:43145972-43145991 None:intergenic 70.0%
GCGGATCGCTGGGGCCATGA+GGG + Chr1:43144942-43144961 None:intergenic 70.0%
TGCGGATCGCTGGGGCCATG+AGG + Chr1:43144943-43144962 None:intergenic 70.0%
! GATTGGCCCGGCCCCGATGA+GGG - Chr1:43145963-43145982 MsG0180002686.01.T01:intron 70.0%
GCTGCGGGAGAGGCCGTGGT+TGG + Chr1:43144971-43144990 None:intergenic 75.0%
! CCGGCCCCGATGAGGGGCAT+AGG - Chr1:43145970-43145989 MsG0180002686.01.T01:intron 75.0%
!! GGATTGGCCCGGCCCCGATG+AGG - Chr1:43145962-43145981 MsG0180002686.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 43142248 43146382 43142248 ID=MsG0180002686.01;Name=MsG0180002686.01
Chr1 mRNA 43142248 43146382 43142248 ID=MsG0180002686.01.T01;Parent=MsG0180002686.01;Name=MsG0180002686.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.8|0.25|0.2|5|0|246
Chr1 exon 43146343 43146382 43146343 ID=MsG0180002686.01.T01:exon:38040;Parent=MsG0180002686.01.T01
Chr1 exon 43145586 43145887 43145586 ID=MsG0180002686.01.T01:exon:38039;Parent=MsG0180002686.01.T01
Chr1 exon 43145329 43145492 43145329 ID=MsG0180002686.01.T01:exon:38038;Parent=MsG0180002686.01.T01
Chr1 exon 43142603 43142698 43142603 ID=MsG0180002686.01.T01:exon:38037;Parent=MsG0180002686.01.T01
Chr1 exon 43142248 43142386 43142248 ID=MsG0180002686.01.T01:exon:38036;Parent=MsG0180002686.01.T01
Chr1 CDS 43146343 43146382 43146343 ID=MsG0180002686.01.T01:cds;Parent=MsG0180002686.01.T01
Chr1 CDS 43145586 43145887 43145586 ID=MsG0180002686.01.T01:cds;Parent=MsG0180002686.01.T01
Chr1 CDS 43145329 43145492 43145329 ID=MsG0180002686.01.T01:cds;Parent=MsG0180002686.01.T01
Chr1 CDS 43142603 43142698 43142603 ID=MsG0180002686.01.T01:cds;Parent=MsG0180002686.01.T01
Chr1 CDS 43142248 43142386 43142248 ID=MsG0180002686.01.T01:cds;Parent=MsG0180002686.01.T01
Gene Sequence

>MsG0180002686.01.T01

ATGGATCCATTCCAAACCTCTCAGCTATGGCGACAATTCGACATCCCAGTTAAATTGCCGTCAGAAAACAATGCTGTGATGAAGTTGCAATCAACCGAGGCCACAGAAGCAGACACAGACTTTTGGCAATGCAAATTCAAACTCAGGGAAGAAAACAGCTCTAAAAGTGTGGAAGAGAGGAAAGAGGAATATAATAGGGCTCGTGCCAGGATCTTTAACTCGAGCAATAATGGTGGTCCAGTGGGTGGGAAGCCAGAATGTGAGACAAGGCACAGGATAACTCATTGCATGGTTCCTCTCTGTGTTACTCGCTGGAAGATAAATGGCATCTGTAGGGGGCTGCTAATACCAGTAGGGGCAGGTGAATCTTCAACTAATACCAGTAGGGCTAGAAATAGGACAGAGAAGGAGCCAGTTGGTAGGTACAGGCAAAGTAATAGGGTGGCCATATTCCGGGACCGTGAAATTGACCGCAAGGATCCTGATTATGACAGAAGCTATGATCGTCTCATCAGCCACCACCTGATGCAAGTTTTGGATTGGCCCGGCCCCGATGAGGGGCATAGGCCATGCCTGCACCCAATCAGCCTGAGCTATACAATCACACACACTGCTGCTTGTGAAGAAAAGAGTAAATCGAGGACATCTGCAGAGCCATATAAGTTTGTGCTTGACTTGGATAAAGGTATGCTTTGCTTAACCTATACTGTGGCATTCAGTCGTTCTTCAAGGTTTGACTGA
Protein sequence

>MsG0180002686.01.T01

MDPFQTSQLWRQFDIPVKLPSENNAVMKLQSTEATEADTDFWQCKFKLREENSSKSVEERKEEYNRARARIFNSSNNGGPVGGKPECETRHRITHCMVPLCVTRWKINGICRGLLIPVGAGESSTNTSRARNRTEKEPVGRYRQSNRVAIFRDREIDRKDPDYDRSYDRLISHHLMQVLDWPGPDEGHRPCLHPISLSYTITHTAACEEKSKSRTSAEPYKFVLDLDKGMLCLTYTVAFSRSSRFD*