AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023814.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023814.01.T01 MTR_8g102760 97.333 75 2 0 2 76 373 447 5.32e-48 157
MsG0480023814.01.T01 MTR_8g105210 49.275 69 35 0 2 70 754 822 2.42e-18 77.8
MsG0480023814.01.T01 MTR_8g027150 51.429 70 34 0 2 71 386 455 3.22e-18 77.4
MsG0480023814.01.T01 MTR_3g096440 53.623 69 32 0 2 70 456 524 4.26e-18 77.0
MsG0480023814.01.T01 MTR_7g083820 52.113 71 34 0 2 72 473 543 1.04e-17 75.9
MsG0480023814.01.T01 MTR_4g113830 47.368 76 39 1 2 76 539 614 1.18e-16 72.8
MsG0480023814.01.T01 MTR_1g059720 49.254 67 34 0 4 70 376 442 2.02e-16 72.0
MsG0480023814.01.T01 MTR_7g093900 44.286 70 39 0 2 71 551 620 2.59e-16 72.0
MsG0480023814.01.T01 MTR_7g093900 44.286 70 39 0 2 71 501 570 2.86e-16 71.6
MsG0480023814.01.T01 MTR_3g084440 44.776 67 37 0 4 70 419 485 1.08e-15 70.1
MsG0480023814.01.T01 MTR_1g059280 43.478 69 39 0 2 70 417 485 1.24e-15 70.1
MsG0480023814.01.T01 MTR_0493s0010 45.588 68 37 0 4 71 413 480 1.33e-15 69.7
MsG0480023814.01.T01 MTR_3g096420 44.928 69 38 0 2 70 564 632 1.55e-15 69.7
MsG0480023814.01.T01 MTR_2g094430 47.826 69 36 0 2 70 479 547 1.67e-15 69.7
MsG0480023814.01.T01 MTR_2g021710 47.826 69 36 0 2 70 624 692 1.81e-15 69.3
MsG0480023814.01.T01 MTR_7g417770 49.254 67 34 0 4 70 749 815 2.11e-15 69.3
MsG0480023814.01.T01 MTR_7g017700 49.254 67 34 0 4 70 749 815 2.11e-15 69.3
MsG0480023814.01.T01 MTR_3g045450 44.928 69 38 0 2 70 712 780 2.39e-15 68.9
MsG0480023814.01.T01 MTR_1g040585 47.761 67 35 0 4 70 432 498 2.43e-15 68.9
MsG0480023814.01.T01 MTR_6g075280 47.826 69 36 0 2 70 408 476 2.45e-15 68.9
MsG0480023814.01.T01 MTR_8g066670 45.714 70 38 0 1 70 760 829 2.70e-15 68.9
MsG0480023814.01.T01 MTR_1g059280 43.478 69 39 0 2 70 233 301 2.71e-15 68.9
MsG0480023814.01.T01 MTR_1g040565 47.761 67 35 0 4 70 375 441 2.76e-15 68.9
MsG0480023814.01.T01 MTR_1g040635 46.269 67 36 0 4 70 540 606 3.52e-15 68.6
MsG0480023814.01.T01 MTR_8g106950 44.928 69 38 0 2 70 567 635 3.70e-15 68.6
MsG0480023814.01.T01 MTR_5g024360 46.377 69 37 0 2 70 491 559 3.74e-15 68.6
MsG0480023814.01.T01 MTR_4g064770 44.928 69 38 0 2 70 477 545 4.35e-15 68.2
MsG0480023814.01.T01 MTR_8g089960 44.928 69 38 0 2 70 457 525 6.44e-15 67.8
MsG0480023814.01.T01 MTR_5g008600 46.269 67 36 0 4 70 472 538 6.87e-15 67.8
MsG0480023814.01.T01 MTR_8g065730 44.776 67 37 0 4 70 551 617 1.31e-14 67.0
MsG0480023814.01.T01 MTR_8g069550 44.776 67 37 0 4 70 560 626 1.31e-14 67.0
MsG0480023814.01.T01 MTR_4g094402 43.478 69 39 0 2 70 578 646 1.75e-14 66.6
MsG0480023814.01.T01 MTR_4g085110 42.029 69 40 0 4 72 617 685 2.93e-14 65.9
MsG0480023814.01.T01 MTR_8g028890 42.857 70 40 0 1 70 543 612 4.65e-14 65.5
MsG0480023814.01.T01 MTR_2g026210 42.029 69 40 0 2 70 328 396 5.48e-14 65.1
MsG0480023814.01.T01 MTR_7g023780 44.286 70 39 0 2 71 520 589 6.07e-14 65.1
MsG0480023814.01.T01 MTR_4g099480 42.857 70 40 0 1 70 434 503 6.99e-14 65.1
MsG0480023814.01.T01 MTR_3g052720 44.286 70 39 0 2 71 613 682 1.00e-13 64.7
MsG0480023814.01.T01 MTR_3g026690 44.928 69 38 0 2 70 776 844 1.01e-13 64.3
MsG0480023814.01.T01 MTR_1g040535 44.776 67 37 0 4 70 485 551 1.04e-13 64.3
MsG0480023814.01.T01 MTR_1g083890 43.243 74 42 0 2 75 414 487 1.08e-13 64.3
MsG0480023814.01.T01 MTR_2g101710 45.312 64 35 0 2 65 421 484 1.12e-13 64.3
MsG0480023814.01.T01 MTR_3g434800 43.284 67 38 0 4 70 523 589 1.35e-13 64.3
MsG0480023814.01.T01 MTR_8g106910 43.478 69 39 0 2 70 535 603 1.49e-13 63.9
MsG0480023814.01.T01 MTR_7g074040 46.377 69 36 1 2 70 508 575 1.67e-13 63.9
MsG0480023814.01.T01 MTR_0013s0120 42.029 69 40 0 4 72 361 429 1.76e-13 63.9
MsG0480023814.01.T01 MTR_2g018870 42.647 68 39 0 4 71 416 483 1.98e-13 63.5
MsG0480023814.01.T01 MTR_7g016960 43.478 69 39 0 2 70 455 523 2.07e-13 63.5
MsG0480023814.01.T01 MTR_5g023040 42.029 69 40 0 2 70 629 697 2.28e-13 63.5
MsG0480023814.01.T01 MTR_5g043450 43.478 69 39 0 2 70 679 747 2.44e-13 63.5
MsG0480023814.01.T01 MTR_5g006570 43.478 69 39 0 2 70 639 707 2.44e-13 63.5
MsG0480023814.01.T01 MTR_1g007610 42.029 69 40 0 2 70 469 537 2.47e-13 63.5
MsG0480023814.01.T01 MTR_1g111670 42.188 64 37 0 2 65 431 494 3.11e-13 63.2
MsG0480023814.01.T01 MTR_4g094402 43.750 64 36 0 2 65 504 567 3.24e-13 63.2
MsG0480023814.01.T01 MTR_8g063290 44.776 67 37 0 4 70 463 529 3.98e-13 62.8
MsG0480023814.01.T01 MTR_7g032360 43.662 71 39 1 2 71 438 508 4.02e-13 62.8
MsG0480023814.01.T01 MTR_7g100810 43.284 67 38 0 4 70 646 712 4.50e-13 62.8
MsG0480023814.01.T01 MTR_8g074780 40.580 69 41 0 2 70 395 463 4.92e-13 62.4
MsG0480023814.01.T01 MTR_1g111020 42.029 69 40 0 2 70 661 729 5.08e-13 62.4
MsG0480023814.01.T01 MTR_7g053240 40.000 70 42 0 2 71 811 880 5.55e-13 62.4
MsG0480023814.01.T01 MTR_2g049310 44.286 70 38 1 2 70 594 663 6.50e-13 62.0
MsG0480023814.01.T01 MTR_1g112500 43.662 71 40 0 2 72 592 662 7.45e-13 62.0
MsG0480023814.01.T01 MTR_2g036960 38.571 70 43 0 1 70 494 563 7.52e-13 62.0
MsG0480023814.01.T01 MTR_6g032915 41.791 67 39 0 4 70 863 929 8.93e-13 62.0
MsG0480023814.01.T01 MTR_7g105440 51.852 54 26 0 2 55 483 536 1.09e-12 61.6
MsG0480023814.01.T01 MTR_3g027990 39.062 64 39 0 2 65 424 487 1.23e-12 61.2
MsG0480023814.01.T01 MTR_4g015760 39.437 71 43 0 2 72 555 625 1.26e-12 61.2
MsG0480023814.01.T01 MTR_1g071240 44.776 67 37 0 4 70 728 794 1.32e-12 61.2
MsG0480023814.01.T01 MTR_4g015760 39.437 71 43 0 2 72 585 655 1.33e-12 61.2
MsG0480023814.01.T01 MTR_7g033400 44.595 74 41 0 1 74 413 486 1.76e-12 60.8
MsG0480023814.01.T01 MTR_2g086150 41.791 67 39 0 4 70 670 736 1.79e-12 60.8
MsG0480023814.01.T01 MTR_8g089940 44.776 67 36 1 4 70 504 569 1.83e-12 60.8
MsG0480023814.01.T01 MTR_8g086040 44.928 69 38 0 2 70 416 484 1.84e-12 60.8
MsG0480023814.01.T01 MTR_1g111020 42.029 69 40 0 2 70 661 729 1.91e-12 60.8
MsG0480023814.01.T01 MTR_5g095690 36.620 71 45 0 4 74 614 684 2.19e-12 60.8
MsG0480023814.01.T01 MTR_4g086490 42.029 69 40 0 2 70 945 1013 2.24e-12 60.8
MsG0480023814.01.T01 MTR_3g005330 43.548 62 35 0 4 65 394 455 2.55e-12 60.5
MsG0480023814.01.T01 MTR_8g035960 40.299 67 40 0 4 70 663 729 3.40e-12 60.1
MsG0480023814.01.T01 MTR_5g008840 35.821 67 43 0 4 70 694 760 3.51e-12 60.1
MsG0480023814.01.T01 MTR_8g096030 40.625 64 38 0 2 65 418 481 4.08e-12 60.1
MsG0480023814.01.T01 MTR_4g023510 39.706 68 41 0 4 71 426 493 4.25e-12 59.7
MsG0480023814.01.T01 MTR_3g011950 33.803 71 47 0 1 71 611 681 5.08e-12 59.7
MsG0480023814.01.T01 MTR_1g059810 42.029 69 40 0 2 70 438 506 5.54e-12 59.7
MsG0480023814.01.T01 MTR_4g098940 40.000 75 45 0 2 76 491 565 5.79e-12 59.3
MsG0480023814.01.T01 MTR_4g118700 43.284 67 38 0 4 70 513 579 5.82e-12 59.3
MsG0480023814.01.T01 MTR_1g073300 40.299 67 40 0 4 70 598 664 6.48e-12 59.3
MsG0480023814.01.T01 MTR_3g072900 45.614 57 31 0 4 60 618 674 6.78e-12 59.3
MsG0480023814.01.T01 MTR_8g086560 42.029 69 40 0 2 70 670 738 7.68e-12 59.3
MsG0480023814.01.T01 MTR_4g084790 50.000 54 27 0 2 55 47 100 8.16e-12 57.4
MsG0480023814.01.T01 MTR_1g085700 39.437 71 42 1 1 70 612 682 8.32e-12 58.9
MsG0480023814.01.T01 MTR_5g006420 43.478 69 39 0 2 70 527 595 8.82e-12 58.9
MsG0480023814.01.T01 MTR_8g063450 38.806 67 41 0 4 70 570 636 1.28e-11 58.5
MsG0480023814.01.T01 MTR_4g095065 41.429 70 41 0 2 71 427 496 1.40e-11 58.5
MsG0480023814.01.T01 MTR_7g105540 50.000 54 27 0 2 55 483 536 1.41e-11 58.5
MsG0480023814.01.T01 MTR_7g108530 43.750 64 36 0 2 65 384 447 1.74e-11 58.2
MsG0480023814.01.T01 MTR_1g041310 35.714 70 45 0 1 70 613 682 1.78e-11 58.2
MsG0480023814.01.T01 MTR_8g105720 40.299 67 40 0 4 70 504 570 1.87e-11 58.2
MsG0480023814.01.T01 MTR_8g031210 38.028 71 44 0 2 72 493 563 1.89e-11 58.2
MsG0480023814.01.T01 MTR_8g031210 38.028 71 44 0 2 72 585 655 2.00e-11 58.2
MsG0480023814.01.T01 MTR_8g107740 37.681 69 43 0 2 70 586 654 2.17e-11 57.8
MsG0480023814.01.T01 MTR_7g089260 37.681 69 43 0 2 70 599 667 2.20e-11 57.8
MsG0480023814.01.T01 MTR_1g014340 40.000 70 42 0 1 70 582 651 2.23e-11 57.8
MsG0480023814.01.T01 MTR_2g042550 41.176 68 40 0 4 71 543 610 2.28e-11 57.8
MsG0480023814.01.T01 MTR_8g098250 40.299 67 40 0 4 70 719 785 2.28e-11 57.8
MsG0480023814.01.T01 MTR_1g103840 36.232 69 44 0 2 70 583 651 2.49e-11 57.8
MsG0480023814.01.T01 MTR_4g133610 36.232 69 44 0 2 70 483 551 2.51e-11 57.8
MsG0480023814.01.T01 MTR_5g008260 37.313 67 42 0 4 70 573 639 2.88e-11 57.4
MsG0480023814.01.T01 MTR_5g025580 35.714 70 45 0 2 71 692 761 3.44e-11 57.4
MsG0480023814.01.T01 MTR_3g011940 33.803 71 47 0 1 71 593 663 3.66e-11 57.4
MsG0480023814.01.T01 MTR_2g009760 40.299 67 40 0 4 70 550 616 3.91e-11 57.0
MsG0480023814.01.T01 MTR_4g108030 43.284 67 38 0 4 70 467 533 3.92e-11 57.0
MsG0480023814.01.T01 MTR_4g074470 43.284 67 38 0 4 70 465 531 4.03e-11 57.0
MsG0480023814.01.T01 MTR_2g035620 41.791 67 39 0 4 70 690 756 4.37e-11 57.0
MsG0480023814.01.T01 MTR_4g088840 41.791 67 39 0 4 70 394 460 5.28e-11 56.6
MsG0480023814.01.T01 MTR_8g088300 41.791 67 39 0 4 70 503 569 5.53e-11 56.6
MsG0480023814.01.T01 MTR_3g117620 37.500 64 40 0 2 65 391 454 5.70e-11 56.6
MsG0480023814.01.T01 MTR_3g109380 37.313 67 42 0 4 70 418 484 6.02e-11 56.6
MsG0480023814.01.T01 MTR_1g007600 38.356 73 45 0 4 76 716 788 6.44e-11 56.6
MsG0480023814.01.T01 MTR_1g040000 39.130 69 42 0 2 70 418 486 6.50e-11 56.6
MsG0480023814.01.T01 MTR_3g098280 38.806 67 41 0 4 70 357 423 6.91e-11 56.6
MsG0480023814.01.T01 MTR_1g073160 42.667 75 43 0 2 76 513 587 8.54e-11 56.2
MsG0480023814.01.T01 MTR_2g007570 36.232 69 44 0 2 70 483 551 8.66e-11 56.2
MsG0480023814.01.T01 MTR_4g014050 35.616 73 47 0 4 76 629 701 9.19e-11 56.2
MsG0480023814.01.T01 MTR_7g076020 41.791 67 39 0 4 70 611 677 9.79e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023814.01.T01 AT1G77170 60.811 74 29 0 2 75 393 466 1.10e-29 108
MsG0480023814.01.T01 AT4G21300 46.377 69 37 0 2 70 716 784 5.38e-17 73.9
MsG0480023814.01.T01 AT4G16835 50.000 70 35 0 1 70 456 525 9.48e-17 73.2
MsG0480023814.01.T01 AT1G09190 47.826 69 36 0 2 70 409 477 1.17e-16 72.8
MsG0480023814.01.T01 AT4G02750 46.377 69 37 0 2 70 582 650 3.77e-16 71.6
MsG0480023814.01.T01 AT1G08070 47.761 67 35 0 4 70 544 610 4.40e-16 71.2
MsG0480023814.01.T01 AT1G20230 52.174 69 33 0 2 70 561 629 7.75e-16 70.5
MsG0480023814.01.T01 AT5G44230 50.725 69 34 0 2 70 457 525 1.21e-15 70.1
MsG0480023814.01.T01 AT5G44230 50.725 69 34 0 2 70 360 428 1.50e-15 69.7
MsG0480023814.01.T01 AT1G08070 47.761 67 35 0 4 70 440 506 2.23e-15 69.3
MsG0480023814.01.T01 AT1G09410 43.662 71 40 0 2 72 505 575 3.50e-15 68.6
MsG0480023814.01.T01 AT3G46790 44.776 67 37 0 2 68 458 524 4.42e-15 68.6
MsG0480023814.01.T01 AT5G39350 46.753 77 38 1 2 75 597 673 1.27e-14 67.0
MsG0480023814.01.T01 AT3G22690 46.269 67 36 0 4 70 645 711 1.27e-14 67.0
MsG0480023814.01.T01 AT3G22690 46.269 67 36 0 4 70 614 680 1.38e-14 67.0
MsG0480023814.01.T01 AT3G22690 46.269 67 36 0 4 70 645 711 1.47e-14 67.0
MsG0480023814.01.T01 AT1G74630 46.377 69 37 0 4 72 460 528 1.62e-14 66.6
MsG0480023814.01.T01 AT1G74630 46.377 69 37 0 4 72 445 513 1.65e-14 66.6
MsG0480023814.01.T01 AT2G22070 43.478 69 39 0 2 70 587 655 2.45e-14 66.2
MsG0480023814.01.T01 AT3G09040 46.269 67 36 0 4 70 908 974 3.44e-14 65.9
MsG0480023814.01.T01 AT3G09040 46.269 67 36 0 4 70 908 974 3.44e-14 65.9
MsG0480023814.01.T01 AT3G09040 46.269 67 36 0 4 70 933 999 3.51e-14 65.9
MsG0480023814.01.T01 AT3G09040 46.269 67 36 0 4 70 933 999 3.51e-14 65.9
MsG0480023814.01.T01 AT5G08510 47.826 69 36 0 2 70 389 457 4.85e-14 65.5
MsG0480023814.01.T01 AT3G08820 43.478 69 39 0 2 70 486 554 5.70e-14 65.1
MsG0480023814.01.T01 AT5G37570 47.692 65 34 0 2 66 478 542 6.47e-14 65.1
MsG0480023814.01.T01 AT5G37570 47.692 65 34 0 2 66 478 542 6.47e-14 65.1
MsG0480023814.01.T01 AT3G13770 42.857 70 40 0 1 70 428 497 6.70e-14 65.1
MsG0480023814.01.T01 AT3G26782 45.588 68 37 0 4 71 462 529 7.05e-14 65.1
MsG0480023814.01.T01 AT4G33990 44.928 69 38 0 2 70 617 685 7.25e-14 65.1
MsG0480023814.01.T01 AT3G13770 42.857 70 40 0 1 70 395 464 7.30e-14 65.1
MsG0480023814.01.T01 AT4G33990 44.928 69 38 0 2 70 624 692 7.39e-14 65.1
MsG0480023814.01.T01 AT2G45350 41.791 67 39 0 4 70 525 591 8.80e-14 64.7
MsG0480023814.01.T01 AT3G49142 46.377 69 37 0 2 70 482 550 9.65e-14 64.7
MsG0480023814.01.T01 AT2G29760 44.928 69 38 0 2 70 538 606 1.04e-13 64.7
MsG0480023814.01.T01 AT5G48910 45.588 68 37 0 4 71 449 516 1.24e-13 64.3
MsG0480023814.01.T01 AT4G19191 45.714 70 38 0 2 71 531 600 1.66e-13 63.9
MsG0480023814.01.T01 AT5G06540 42.254 71 41 0 1 71 421 491 1.68e-13 63.9
MsG0480023814.01.T01 AT4G21065 42.029 69 40 0 4 72 265 333 1.76e-13 63.9
MsG0480023814.01.T01 AT4G21065 42.029 69 40 0 4 72 398 466 1.83e-13 63.9
MsG0480023814.01.T01 AT5G59200 41.429 70 41 0 1 70 427 496 2.39e-13 63.5
MsG0480023814.01.T01 AT5G16860 41.791 67 39 0 4 70 653 719 2.71e-13 63.2
MsG0480023814.01.T01 AT3G14330 45.312 64 35 0 2 65 510 573 3.24e-13 63.2
MsG0480023814.01.T01 AT2G20540 40.000 70 42 0 2 71 414 483 4.29e-13 62.8
MsG0480023814.01.T01 AT2G13600 42.029 69 40 0 2 70 565 633 4.65e-13 62.8
MsG0480023814.01.T01 AT1G10330 39.726 73 44 0 1 73 395 467 6.60e-13 62.4
MsG0480023814.01.T01 AT3G12770 45.312 64 35 0 2 65 495 558 8.27e-13 62.0
MsG0480023814.01.T01 AT2G20540 40.000 70 42 0 2 71 384 453 8.38e-13 62.0
MsG0480023814.01.T01 AT3G47530 43.284 67 38 0 4 70 393 459 1.47e-12 61.2
MsG0480023814.01.T01 AT3G24000 41.791 67 39 0 4 70 436 502 1.73e-12 60.8
MsG0480023814.01.T01 AT3G11460 44.928 69 38 0 2 70 430 498 1.75e-12 60.8
MsG0480023814.01.T01 AT2G02980 41.791 67 39 0 4 70 405 471 1.76e-12 60.8
MsG0480023814.01.T01 AT2G03880 43.284 67 38 0 4 70 433 499 1.80e-12 60.8
MsG0480023814.01.T01 AT4G19220 38.571 70 43 0 2 71 872 941 1.97e-12 60.8
MsG0480023814.01.T01 AT5G65570 40.299 67 40 0 4 70 541 607 2.47e-12 60.5
MsG0480023814.01.T01 AT1G74600 42.029 69 40 0 2 70 825 893 2.88e-12 60.5
MsG0480023814.01.T01 AT5G43790 41.791 67 39 0 4 70 391 457 3.53e-12 60.1
MsG0480023814.01.T01 AT4G37380 40.299 67 40 0 4 70 435 501 4.73e-12 59.7
MsG0480023814.01.T01 AT1G69350 40.580 69 41 0 2 70 676 744 5.21e-12 59.7
MsG0480023814.01.T01 AT4G14170 38.571 70 43 0 1 70 406 475 5.24e-12 59.7
MsG0480023814.01.T01 AT4G39952 37.143 70 44 0 2 71 705 774 6.58e-12 59.3
MsG0480023814.01.T01 AT1G68930 40.299 67 40 0 4 70 546 612 6.70e-12 59.3
MsG0480023814.01.T01 AT1G68930 40.299 67 40 0 4 70 520 586 6.82e-12 59.3
MsG0480023814.01.T01 AT1G71490 36.986 73 45 1 4 75 557 629 7.15e-12 59.3
MsG0480023814.01.T01 AT5G40410 42.029 69 40 0 2 70 408 476 8.65e-12 58.9
MsG0480023814.01.T01 AT2G22410 36.232 69 44 0 2 70 562 630 9.22e-12 58.9
MsG0480023814.01.T01 AT1G33350 37.681 69 43 0 2 70 436 504 1.31e-11 58.5
MsG0480023814.01.T01 AT1G33350 37.681 69 43 0 2 70 436 504 1.31e-11 58.5
MsG0480023814.01.T01 AT1G34160 38.806 67 41 0 4 70 334 400 1.37e-11 58.5
MsG0480023814.01.T01 AT3G01580 42.254 71 41 0 1 71 539 609 1.40e-11 58.5
MsG0480023814.01.T01 AT2G33760 45.588 68 37 0 4 71 387 454 1.45e-11 58.5
MsG0480023814.01.T01 AT4G37170 40.580 69 41 0 4 72 494 562 1.47e-11 58.5
MsG0480023814.01.T01 AT4G16470 42.029 69 40 0 2 70 382 450 1.58e-11 58.2
MsG0480023814.01.T01 AT1G34160 38.806 67 41 0 4 70 381 447 1.61e-11 58.2
MsG0480023814.01.T01 AT1G56690 40.580 69 41 0 2 70 504 572 1.63e-11 58.2
MsG0480023814.01.T01 AT3G23330 40.299 67 40 0 4 70 518 584 1.63e-11 58.2
MsG0480023814.01.T01 AT4G39530 41.791 67 39 0 4 70 729 795 1.88e-11 58.2
MsG0480023814.01.T01 AT1G15510 39.683 63 38 0 2 64 669 731 1.92e-11 58.2
MsG0480023814.01.T01 AT5G15300 35.616 73 47 0 4 76 454 526 1.92e-11 58.2
MsG0480023814.01.T01 AT3G23330 40.299 67 40 0 4 70 409 475 2.19e-11 57.8
MsG0480023814.01.T01 AT4G14170 38.571 70 43 0 1 70 307 376 2.23e-11 57.8
MsG0480023814.01.T01 AT1G74400 43.333 60 34 0 4 63 350 409 2.45e-11 57.8
MsG0480023814.01.T01 AT1G06140 47.368 57 30 0 2 58 485 541 2.62e-11 57.8
MsG0480023814.01.T01 AT1G17630 45.455 55 30 0 1 55 606 660 3.42e-11 57.4
MsG0480023814.01.T01 AT1G17630 45.455 55 30 0 1 55 606 660 3.42e-11 57.4
MsG0480023814.01.T01 AT2G27610 35.821 67 43 0 4 70 670 736 3.55e-11 57.4
MsG0480023814.01.T01 AT4G18750 42.029 69 40 0 2 70 672 740 4.03e-11 57.0
MsG0480023814.01.T01 AT1G64310 42.254 71 40 1 1 70 480 550 4.11e-11 57.0
MsG0480023814.01.T01 AT1G11290 39.437 71 43 0 2 72 611 681 4.18e-11 57.0
MsG0480023814.01.T01 AT1G16480 40.299 67 40 0 4 70 723 789 5.05e-11 57.0
MsG0480023814.01.T01 AT2G21090 38.806 67 41 0 4 70 487 553 5.06e-11 57.0
MsG0480023814.01.T01 AT3G63370 38.806 67 41 0 4 70 762 828 5.10e-11 57.0
MsG0480023814.01.T01 AT1G16480 40.299 67 40 0 4 70 740 806 5.15e-11 57.0
MsG0480023814.01.T01 AT3G63370 38.806 67 41 0 4 70 762 828 5.67e-11 56.6
MsG0480023814.01.T01 AT5G61800 38.710 62 38 0 4 65 428 489 5.98e-11 56.6
MsG0480023814.01.T01 AT1G50270 33.333 69 46 0 2 70 479 547 6.10e-11 56.6
MsG0480023814.01.T01 AT4G20770 37.143 70 44 0 4 73 694 763 6.22e-11 56.6
MsG0480023814.01.T01 AT3G02010 41.176 68 39 1 4 70 627 694 6.30e-11 56.6
MsG0480023814.01.T01 AT4G14820 39.062 64 39 0 2 65 517 580 6.39e-11 56.6
MsG0480023814.01.T01 AT4G01030 37.097 62 39 0 2 63 569 630 8.59e-11 56.2

Find 24 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTTCCACAAGCCTTTAT+TGG 0.143060 4:+90119237 None:intergenic
TCAAATATCTATGCCAATAA+AGG 0.323607 4:-90119250 MsG0480023814.01.T01:CDS
AAGCCTTCCTTCTTTCATAA+AGG 0.351074 4:+90119198 None:intergenic
CAGTAGTATGGGGTGTTTGA+TGG 0.389954 4:-90119371 None:intergenic
AGCTGAGCATTTGCAAGCAT+TGG 0.421569 4:-90119305 MsG0480023814.01.T01:CDS
GAAACATGGAAATGTGGATA+TGG 0.455303 4:-90119338 MsG0480023814.01.T01:CDS
ATTTGCAAGCATTGGAACCT+TGG 0.468766 4:-90119297 MsG0480023814.01.T01:CDS
TGAATTTGTTGTGATGCTAT+AGG 0.475701 4:+90119162 None:intergenic
GCATTGGAACCTTGGAATGA+AGG 0.480877 4:-90119289 MsG0480023814.01.T01:CDS
ATAAGATCCTTTATGAAAGA+AGG 0.493237 4:-90119205 MsG0480023814.01.T01:CDS
TAAAGGCTTGTGGAAGGAGG+TGG 0.506225 4:-90119233 MsG0480023814.01.T01:CDS
AGTAGTATGGGGTGTTTGAT+GGG 0.516715 4:-90119370 None:intergenic
ACATAAACACCTTCATTCCA+AGG 0.552388 4:+90119280 None:intergenic
GAAAGAAGGAAGGCTTGCTA+AGG 0.553222 4:-90119191 MsG0480023814.01.T01:CDS
GATCCTTTATGAAAGAAGGA+AGG 0.576291 4:-90119201 MsG0480023814.01.T01:CDS
TTGGAATGAAGGTGTTTATG+TGG 0.596852 4:-90119278 MsG0480023814.01.T01:CDS
TCTATGCCAATAAAGGCTTG+TGG 0.600783 4:-90119243 MsG0480023814.01.T01:CDS
AAATGTGGATATGGCAGAGT+GGG 0.605655 4:-90119329 MsG0480023814.01.T01:CDS
TGCCAATAAAGGCTTGTGGA+AGG 0.609441 4:-90119239 MsG0480023814.01.T01:CDS
TTTGTTGTGATGCTATAGGC+AGG 0.609999 4:+90119166 None:intergenic
ATGGGTGCGTGTGAGAAACA+TGG 0.630303 4:-90119352 MsG0480023814.01.T01:CDS
CAATAAAGGCTTGTGGAAGG+AGG 0.638067 4:-90119236 MsG0480023814.01.T01:CDS
GTGTGAGAAACATGGAAATG+TGG 0.722216 4:-90119344 MsG0480023814.01.T01:CDS
GAAATGTGGATATGGCAGAG+TGG 0.753288 4:-90119330 MsG0480023814.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATAAGATCCTTTATGAAAGA+AGG - Chr4:90119315-90119334 MsG0480023814.01.T01:CDS 25.0%
! TCAAATATCTATGCCAATAA+AGG - Chr4:90119270-90119289 MsG0480023814.01.T01:CDS 25.0%
!! TGAATTTGTTGTGATGCTAT+AGG + Chr4:90119361-90119380 None:intergenic 30.0%
AAGCCTTCCTTCTTTCATAA+AGG + Chr4:90119325-90119344 None:intergenic 35.0%
ACATAAACACCTTCATTCCA+AGG + Chr4:90119243-90119262 None:intergenic 35.0%
GAAACATGGAAATGTGGATA+TGG - Chr4:90119182-90119201 MsG0480023814.01.T01:CDS 35.0%
GATCCTTTATGAAAGAAGGA+AGG - Chr4:90119319-90119338 MsG0480023814.01.T01:CDS 35.0%
!! TTGGAATGAAGGTGTTTATG+TGG - Chr4:90119242-90119261 MsG0480023814.01.T01:CDS 35.0%
AAATGTGGATATGGCAGAGT+GGG - Chr4:90119191-90119210 MsG0480023814.01.T01:CDS 40.0%
GTGTGAGAAACATGGAAATG+TGG - Chr4:90119176-90119195 MsG0480023814.01.T01:CDS 40.0%
TCTATGCCAATAAAGGCTTG+TGG - Chr4:90119277-90119296 MsG0480023814.01.T01:CDS 40.0%
! TTTGTTGTGATGCTATAGGC+AGG + Chr4:90119357-90119376 None:intergenic 40.0%
!! ATTTGCAAGCATTGGAACCT+TGG - Chr4:90119223-90119242 MsG0480023814.01.T01:CDS 40.0%
AGCTGAGCATTTGCAAGCAT+TGG - Chr4:90119215-90119234 MsG0480023814.01.T01:CDS 45.0%
CAATAAAGGCTTGTGGAAGG+AGG - Chr4:90119284-90119303 MsG0480023814.01.T01:CDS 45.0%
CTCCTTCCACAAGCCTTTAT+TGG + Chr4:90119286-90119305 None:intergenic 45.0%
GAAATGTGGATATGGCAGAG+TGG - Chr4:90119190-90119209 MsG0480023814.01.T01:CDS 45.0%
GCATTGGAACCTTGGAATGA+AGG - Chr4:90119231-90119250 MsG0480023814.01.T01:CDS 45.0%
TGCCAATAAAGGCTTGTGGA+AGG - Chr4:90119281-90119300 MsG0480023814.01.T01:CDS 45.0%
!! GAAAGAAGGAAGGCTTGCTA+AGG - Chr4:90119329-90119348 MsG0480023814.01.T01:CDS 45.0%
ATGGGTGCGTGTGAGAAACA+TGG - Chr4:90119168-90119187 MsG0480023814.01.T01:CDS 50.0%
TAAAGGCTTGTGGAAGGAGG+TGG - Chr4:90119287-90119306 MsG0480023814.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 90119156 90119386 90119156 ID=MsG0480023814.01;Name=MsG0480023814.01
Chr4 mRNA 90119156 90119386 90119156 ID=MsG0480023814.01.T01;Parent=MsG0480023814.01;Name=MsG0480023814.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|76
Chr4 exon 90119156 90119386 90119156 ID=MsG0480023814.01.T01:exon:8132;Parent=MsG0480023814.01.T01
Chr4 CDS 90119156 90119386 90119156 ID=MsG0480023814.01.T01:cds;Parent=MsG0480023814.01.T01
Gene Sequence

>MsG0480023814.01.T01

ATGGGGTGTTTGATGGGTGCGTGTGAGAAACATGGAAATGTGGATATGGCAGAGTGGGTAGCTGAGCATTTGCAAGCATTGGAACCTTGGAATGAAGGTGTTTATGTGGTATTGTCAAATATCTATGCCAATAAAGGCTTGTGGAAGGAGGTGGAGAGAATAAGATCCTTTATGAAAGAAGGAAGGCTTGCTAAGGTTCCTGCCTATAGCATCACAACAAATTCAGATTGA

Protein sequence

>MsG0480023814.01.T01

MGCLMGACEKHGNVDMAEWVAEHLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKVPAYSITTNSD*