Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006487.01.T01 | AES63513.2 | 90.654 | 535 | 47 | 3 | 1 | 533 | 1 | 534 | 0 | 837 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006487.01.T01 | G7IPP0 | 90.654 | 535 | 47 | 3 | 1 | 533 | 1 | 534 | 0.0 | 837 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000178.01 | MsG0280006487.01 | 0.800594 | 1.339495e-48 | 6.261665e-46 |
| MsG0180000807.01 | MsG0280006487.01 | 0.827463 | 1.542811e-54 | 1.490599e-51 |
| MsG0180006000.01 | MsG0280006487.01 | 0.855787 | 4.989736e-62 | 1.165502e-58 |
| MsG0280006487.01 | MsG0280006762.01 | 0.808427 | 3.113686e-50 | 1.779875e-47 |
| MsG0280006487.01 | MsG0280010779.01 | 0.813469 | 2.519840e-51 | 1.647020e-48 |
| MsG0280006487.01 | MsG0380012088.01 | 0.804222 | 2.396529e-49 | 1.228749e-46 |
| MsG0280006487.01 | MsG0380016140.01 | 0.812092 | 5.045863e-51 | 3.178329e-48 |
| MsG0280006487.01 | MsG0380016920.01 | 0.841127 | 5.736486e-58 | 8.347166e-55 |
| MsG0280006487.01 | MsG0380017061.01 | 0.826478 | 2.653411e-54 | 2.491178e-51 |
| MsG0280006487.01 | MsG0480018397.01 | 0.804527 | 2.069945e-49 | 1.069672e-46 |
| MsG0280006487.01 | MsG0480018517.01 | 0.816154 | 6.400572e-52 | 4.500401e-49 |
| MsG0280006487.01 | MsG0480020699.01 | 0.862657 | 4.337756e-64 | 1.280038e-60 |
| MsG0280006487.01 | MsG0480020847.01 | 0.817904 | 2.588599e-52 | 1.909332e-49 |
| MsG0280006487.01 | MsG0480020965.01 | 0.835408 | 1.707680e-56 | 2.086405e-53 |
| MsG0280006487.01 | MsG0480021013.01 | 0.808435 | 3.101490e-50 | 1.773283e-47 |
| MsG0280006487.01 | MsG0580024317.01 | 0.833660 | 4.694860e-56 | 5.442566e-53 |
| MsG0280006487.01 | MsG0580024426.01 | 0.801773 | 7.687276e-49 | 3.702268e-46 |
| MsG0280006487.01 | MsG0580024722.01 | 0.807177 | 5.740848e-50 | 3.175935e-47 |
| MsG0280006487.01 | MsG0580026089.01 | 0.831434 | 1.672979e-55 | 1.815200e-52 |
| MsG0280006487.01 | MsG0780036702.01 | 0.812503 | 4.102296e-51 | 2.612845e-48 |
| MsG0280006487.01 | MsG0780040307.01 | 0.820184 | 7.841483e-53 | 6.161343e-50 |
| MsG0280006487.01 | MsG0880042813.01 | 0.808763 | 2.639887e-50 | 1.522231e-47 |
| MsG0280006487.01 | MsG0880043614.01 | 0.853280 | 2.653218e-61 | 5.702558e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006487.01.T01 | MTR_2g009520 | 90.654 | 535 | 47 | 3 | 1 | 533 | 1 | 534 | 0.0 | 837 |
| MsG0280006487.01.T01 | MTR_4g093930 | 52.126 | 541 | 199 | 15 | 1 | 533 | 1 | 489 | 6.52e-154 | 449 |
| MsG0280006487.01.T01 | MTR_5g066100 | 47.445 | 137 | 72 | 0 | 1 | 137 | 1 | 137 | 3.35e-36 | 138 |
| MsG0280006487.01.T01 | MTR_5g066100 | 45.070 | 71 | 29 | 3 | 242 | 309 | 186 | 249 | 4.93e-13 | 70.9 |
| MsG0280006487.01.T01 | MTR_3g100330 | 44.030 | 134 | 72 | 1 | 4 | 134 | 3 | 136 | 9.92e-31 | 119 |
| MsG0280006487.01.T01 | MTR_3g100330 | 48.529 | 68 | 27 | 2 | 243 | 309 | 148 | 208 | 1.70e-16 | 79.3 |
| MsG0280006487.01.T01 | MTR_3g099170 | 29.670 | 273 | 172 | 6 | 16 | 282 | 29 | 287 | 9.31e-24 | 106 |
| MsG0280006487.01.T01 | MTR_6g059870 | 26.429 | 280 | 150 | 6 | 5 | 284 | 4 | 227 | 1.50e-23 | 105 |
| MsG0280006487.01.T01 | MTR_3g091040 | 25.979 | 281 | 155 | 4 | 5 | 285 | 4 | 231 | 1.92e-23 | 105 |
| MsG0280006487.01.T01 | MTR_2g020420 | 27.338 | 278 | 148 | 6 | 5 | 279 | 4 | 230 | 3.83e-20 | 95.1 |
| MsG0280006487.01.T01 | MTR_2g020420 | 27.338 | 278 | 148 | 6 | 5 | 279 | 4 | 230 | 4.04e-20 | 94.7 |
| MsG0280006487.01.T01 | MTR_4g118660 | 35.616 | 146 | 92 | 2 | 5 | 149 | 45 | 189 | 1.90e-17 | 86.7 |
| MsG0280006487.01.T01 | MTR_5g097170 | 34.146 | 123 | 80 | 1 | 4 | 126 | 3 | 124 | 2.37e-16 | 82.8 |
| MsG0280006487.01.T01 | MTR_8g068845 | 38.356 | 73 | 41 | 1 | 237 | 309 | 140 | 208 | 4.77e-13 | 69.7 |
| MsG0280006487.01.T01 | MTR_8g068845 | 33.871 | 124 | 78 | 3 | 13 | 132 | 13 | 136 | 1.34e-11 | 65.5 |
| MsG0280006487.01.T01 | MTR_3g082810 | 31.667 | 120 | 81 | 1 | 4 | 123 | 3 | 121 | 1.20e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280006487.01.T01 | AT5G64360 | 36.449 | 535 | 240 | 13 | 8 | 531 | 17 | 462 | 6.56e-91 | 286 |
| MsG0280006487.01.T01 | AT5G64360 | 36.449 | 535 | 240 | 13 | 8 | 531 | 17 | 462 | 6.56e-91 | 286 |
| MsG0280006487.01.T01 | AT5G64360 | 36.449 | 535 | 240 | 13 | 8 | 531 | 17 | 462 | 6.56e-91 | 286 |
| MsG0280006487.01.T01 | AT5G64360 | 36.449 | 535 | 240 | 13 | 8 | 531 | 17 | 462 | 6.56e-91 | 286 |
| MsG0280006487.01.T01 | AT5G64360 | 36.449 | 535 | 240 | 13 | 8 | 531 | 17 | 462 | 6.56e-91 | 286 |
| MsG0280006487.01.T01 | AT5G64360 | 36.449 | 535 | 240 | 13 | 8 | 531 | 17 | 462 | 6.56e-91 | 286 |
| MsG0280006487.01.T01 | AT5G64360 | 35.094 | 530 | 212 | 13 | 8 | 531 | 17 | 420 | 3.52e-86 | 273 |
| MsG0280006487.01.T01 | AT5G09540 | 48.872 | 133 | 65 | 2 | 5 | 134 | 10 | 142 | 1.05e-33 | 129 |
| MsG0280006487.01.T01 | AT5G09540 | 43.617 | 94 | 40 | 3 | 240 | 332 | 168 | 249 | 1.17e-19 | 89.7 |
| MsG0280006487.01.T01 | AT1G62970 | 48.485 | 132 | 63 | 2 | 8 | 134 | 17 | 148 | 8.06e-33 | 134 |
| MsG0280006487.01.T01 | AT1G62970 | 33.588 | 131 | 68 | 5 | 219 | 345 | 620 | 735 | 8.17e-17 | 84.3 |
| MsG0280006487.01.T01 | AT2G01710 | 49.265 | 136 | 64 | 2 | 5 | 135 | 7 | 142 | 4.21e-32 | 125 |
| MsG0280006487.01.T01 | AT2G01710 | 49.296 | 71 | 28 | 2 | 242 | 311 | 165 | 228 | 3.79e-18 | 85.9 |
| MsG0280006487.01.T01 | AT2G01710 | 49.265 | 136 | 64 | 2 | 5 | 135 | 51 | 186 | 3.14e-31 | 124 |
| MsG0280006487.01.T01 | AT2G01710 | 49.296 | 71 | 28 | 2 | 242 | 311 | 209 | 272 | 7.15e-18 | 85.9 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G37380 | 28.763 | 299 | 170 | 6 | 5 | 282 | 4 | 280 | 7.85e-31 | 125 |
| MsG0280006487.01.T01 | AT5G53150 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.34e-22 | 102 |
| MsG0280006487.01.T01 | AT5G53150 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.34e-22 | 102 |
| MsG0280006487.01.T01 | AT5G53150 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.43e-22 | 102 |
| MsG0280006487.01.T01 | AT5G53150 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.43e-22 | 102 |
| MsG0280006487.01.T01 | AT5G53150 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.43e-22 | 102 |
| MsG0280006487.01.T01 | AT5G53150 | 27.372 | 274 | 157 | 8 | 5 | 276 | 4 | 237 | 1.72e-22 | 101 |
| MsG0280006487.01.T01 | AT3G06340 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.06e-18 | 90.1 |
| MsG0280006487.01.T01 | AT3G06340 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.06e-18 | 90.1 |
| MsG0280006487.01.T01 | AT3G06340 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.06e-18 | 90.1 |
| MsG0280006487.01.T01 | AT3G06340 | 26.523 | 279 | 142 | 8 | 5 | 276 | 4 | 226 | 1.06e-18 | 90.1 |
| MsG0280006487.01.T01 | AT1G62970 | 35.398 | 113 | 55 | 4 | 236 | 345 | 483 | 580 | 8.31e-17 | 84.0 |
| MsG0280006487.01.T01 | AT4G19570 | 32.812 | 128 | 85 | 1 | 4 | 131 | 3 | 129 | 9.74e-16 | 80.5 |
| MsG0280006487.01.T01 | AT2G05230 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 7.05e-15 | 78.2 |
| MsG0280006487.01.T01 | AT2G05250 | 34.146 | 123 | 80 | 1 | 6 | 128 | 5 | 126 | 7.05e-15 | 78.2 |
| MsG0280006487.01.T01 | AT2G25560 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 8.73e-15 | 77.8 |
| MsG0280006487.01.T01 | AT3G04980 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 2.64e-14 | 76.6 |
| MsG0280006487.01.T01 | AT3G04980 | 34.400 | 125 | 81 | 1 | 5 | 129 | 4 | 127 | 2.64e-14 | 76.6 |
| MsG0280006487.01.T01 | AT4G19580 | 34.188 | 117 | 76 | 1 | 5 | 121 | 4 | 119 | 1.83e-13 | 72.0 |
| MsG0280006487.01.T01 | AT3G04980 | 35.455 | 110 | 70 | 1 | 20 | 129 | 1 | 109 | 2.90e-13 | 73.2 |
| MsG0280006487.01.T01 | AT4G19590 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 2.29e-12 | 68.9 |
| MsG0280006487.01.T01 | AT4G19590 | 32.812 | 128 | 84 | 2 | 5 | 131 | 4 | 130 | 2.56e-12 | 68.9 |
| MsG0280006487.01.T01 | AT4G19590 | 32.479 | 117 | 77 | 2 | 16 | 131 | 4 | 119 | 6.99e-11 | 64.3 |
Find 185 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGAGGTGCTGGAAATT+TGG | 0.166054 | 2:-2647103 | MsG0280006487.01.T01:CDS |
| AAACTGACGGTCAAACTTTC+TGG | 0.186075 | 2:-2647773 | MsG0280006487.01.T01:CDS |
| CTTATGAGGATTTGAGAAAA+TGG | 0.235667 | 2:+2648133 | None:intergenic |
| AGGCCCAGGCCGGAGTCTGC+TGG | 0.259644 | 2:-2647810 | MsG0280006487.01.T01:CDS |
| AAGAGAAGAAGAGGGGCTTT+TGG | 0.287237 | 2:-2647321 | MsG0280006487.01.T01:CDS |
| CATTGGTTGACCTAGGGTTT+TGG | 0.291648 | 2:+2647907 | None:intergenic |
| AGGAGAGGTGCTGGAAATTT+GGG | 0.299385 | 2:-2647102 | MsG0280006487.01.T01:CDS |
| TCATGATCATAATAACTAAA+AGG | 0.301913 | 2:+2647450 | None:intergenic |
| TGCTGGAAATTTGGGTAAGT+TGG | 0.320594 | 2:-2647094 | MsG0280006487.01.T01:CDS |
| TCCTCATCAATCACCCTAAC+AGG | 0.328433 | 2:+2647882 | None:intergenic |
| AAGCAAACGGGTTACGGTTC+GGG | 0.334461 | 2:+2648195 | None:intergenic |
| GCAGACTCCGGCCTGGGCCT+AGG | 0.344007 | 2:+2647813 | None:intergenic |
| CGCCCGTTCCTTCGCCATTC+GGG | 0.353379 | 2:-2648402 | MsG0280006487.01.T01:CDS |
| GGTGGTTGTGGTTGCGGCGG+TGG | 0.354538 | 2:+2648065 | None:intergenic |
| GTCAATGCTGGTGAGTCTAC+TGG | 0.357599 | 2:-2647837 | MsG0280006487.01.T01:CDS |
| GGTCAACCAATGAACCTGTT+AGG | 0.359838 | 2:-2647896 | MsG0280006487.01.T01:CDS |
| GCGCCCGTTCCTTCGCCATT+CGG | 0.370967 | 2:-2648403 | MsG0280006487.01.T01:CDS |
| AGCCCCAGCAGACTCCGGCC+TGG | 0.373358 | 2:+2647806 | None:intergenic |
| CAGGGGAACGTGAACGGGAC+AGG | 0.374674 | 2:-2647015 | MsG0280006487.01.T01:CDS |
| AATCACCCTAACAGGTTCAT+TGG | 0.383228 | 2:+2647890 | None:intergenic |
| GGTGGTGGTGGTTGTGGTTG+CGG | 0.384861 | 2:+2648059 | None:intergenic |
| TGCTGTGGATGTGGTGGTGG+TGG | 0.386613 | 2:+2648044 | None:intergenic |
| GGCCCAGGCCGGAGTCTGCT+GGG | 0.387098 | 2:-2647809 | MsG0280006487.01.T01:CDS |
| GCCCCAGCAGACTCCGGCCT+GGG | 0.390143 | 2:+2647807 | None:intergenic |
| TCTCTCTTGTTCACGATGCT+TGG | 0.391599 | 2:-2648157 | MsG0280006487.01.T01:CDS |
| GGTTGTGGTTGCGGCGGTGG+TGG | 0.399199 | 2:+2648068 | None:intergenic |
| TGTGGTTGCGGCGGTGGTGG+TGG | 0.399655 | 2:+2648071 | None:intergenic |
| TCATACAAAGCTTTCTTATG+AGG | 0.399685 | 2:+2648119 | None:intergenic |
| TTCTTCTTCGCACCATTCAT+AGG | 0.404699 | 2:+2647486 | None:intergenic |
| TCTGCAACAACATTAAGAAT+TGG | 0.411978 | 2:+2646925 | None:intergenic |
| TGCCCGAATGGCGAAGGAAC+GGG | 0.412075 | 2:+2648400 | None:intergenic |
| TTCTGCTAGTGGAGTGAGAC+AGG | 0.412907 | 2:-2647034 | MsG0280006487.01.T01:CDS |
| TCAACATTTGACACCATTGC+AGG | 0.413719 | 2:+2647159 | None:intergenic |
| TGTGGATGTGGTGGTGGTGG+TGG | 0.414191 | 2:+2648047 | None:intergenic |
| TAAGCAAACGGGTTACGGTT+CGG | 0.421723 | 2:+2648194 | None:intergenic |
| AGGATAATATTGAAGGGATT+GGG | 0.422331 | 2:-2646984 | MsG0280006487.01.T01:CDS |
| AAATGCTGTGGTTGCGGTTG+TGG | 0.425742 | 2:+2647990 | None:intergenic |
| CAGCATAAGCAAACGGGTTA+CGG | 0.426424 | 2:+2648189 | None:intergenic |
| TAAGAATTGGCAAGCTACTA+AGG | 0.428199 | 2:+2646938 | None:intergenic |
| ACGGCCTGTCCTTACTGTTA+TGG | 0.430147 | 2:-2647750 | MsG0280006487.01.T01:CDS |
| AGTCTACTGGGCCTAGGCCC+AGG | 0.432183 | 2:-2647824 | MsG0280006487.01.T01:CDS |
| CCTACCCATCCTACTCCCTT+TGG | 0.432200 | 2:+2647353 | None:intergenic |
| GGATATCAATGGGTCTTCTT+CGG | 0.433579 | 2:-2647541 | MsG0280006487.01.T01:CDS |
| TTCTTTGATTCTAGCTTCAC+CGG | 0.434187 | 2:+2648313 | None:intergenic |
| TGAGACAGGGGAACGTGAAC+GGG | 0.436741 | 2:-2647020 | MsG0280006487.01.T01:CDS |
| AGTTCAGTGGCTTCGAATCT+CGG | 0.439160 | 2:+2648365 | None:intergenic |
| GGAGACCAATTGAGAGGCCT+AGG | 0.439545 | 2:-2647275 | MsG0280006487.01.T01:CDS |
| GAGGATAATATTGAAGGGAT+TGG | 0.440885 | 2:-2646985 | MsG0280006487.01.T01:CDS |
| GTTCAGTGGCTTCGAATCTC+GGG | 0.442981 | 2:+2648366 | None:intergenic |
| CGGGCACCACCGGAGGTGAC+TGG | 0.443466 | 2:-2647645 | MsG0280006487.01.T01:CDS |
| GAAGGAGGAAGAGAAGAAGA+GGG | 0.444043 | 2:-2647329 | MsG0280006487.01.T01:CDS |
| TTGTTTCATTGCCCTATGAA+TGG | 0.444185 | 2:-2647498 | MsG0280006487.01.T01:CDS |
| CTGGTGAGTCTACTGGGCCT+AGG | 0.451838 | 2:-2647830 | MsG0280006487.01.T01:CDS |
| GTAGGATGGGTAGGAGAAGG+AGG | 0.454601 | 2:-2647344 | MsG0280006487.01.T01:CDS |
| CCCCTCCTAGGCCTCTCAAT+TGG | 0.455567 | 2:+2647270 | None:intergenic |
| GCATGAGCAGCATAAGCAAA+CGG | 0.469281 | 2:+2648182 | None:intergenic |
| ACGGGTTACGGTTCGGGTCA+AGG | 0.470734 | 2:+2648201 | None:intergenic |
| GGAGTAGGATGGGTAGGAGA+AGG | 0.475139 | 2:-2647347 | MsG0280006487.01.T01:CDS |
| TCCGGTGTCAGAATTGTAAG+AGG | 0.475899 | 2:-2647689 | MsG0280006487.01.T01:CDS |
| AGTTTGACCGTCAGTTTCAC+CGG | 0.476193 | 2:+2647779 | None:intergenic |
| GGTGATTGGCGGGGTACCAA+AGG | 0.477928 | 2:-2647369 | MsG0280006487.01.T01:CDS |
| GGTGGTAAAGGAAATTGAAT+AGG | 0.479480 | 2:+2648011 | None:intergenic |
| GGTTTGAGAAGGAGAGGTGC+TGG | 0.480995 | 2:-2647111 | MsG0280006487.01.T01:CDS |
| TGATACCTGTGCAGCGTTCG+CGG | 0.484855 | 2:-2647430 | MsG0280006487.01.T01:CDS |
| GTGCAATCAACGTAAACCTT+AGG | 0.485929 | 2:+2647714 | None:intergenic |
| CCGTCTTCTCCAGTCACCTC+CGG | 0.487601 | 2:+2647636 | None:intergenic |
| ACGCGCGCTGAGGAGTTTGT+TGG | 0.488952 | 2:+2648436 | None:intergenic |
| CATGAGCAGCATAAGCAAAC+GGG | 0.491884 | 2:+2648183 | None:intergenic |
| GAGTCTGCTGGGGCTAAGCC+CGG | 0.494733 | 2:-2647798 | MsG0280006487.01.T01:CDS |
| TGTTGCTGTGGATGTGGTGG+TGG | 0.498810 | 2:+2648041 | None:intergenic |
| AGAAGGAGGAAGAGAAGAAG+AGG | 0.499015 | 2:-2647330 | MsG0280006487.01.T01:CDS |
| CAATTGAGAGGCCTAGGAGG+GGG | 0.504720 | 2:-2647269 | MsG0280006487.01.T01:CDS |
| TGGCATGTTTGAGTATCCTA+AGG | 0.510841 | 2:-2647730 | MsG0280006487.01.T01:CDS |
| TCAATGCTGGTGAGTCTACT+GGG | 0.514127 | 2:-2647836 | MsG0280006487.01.T01:CDS |
| TACTGGGCCTAGGCCCAGGC+CGG | 0.518600 | 2:-2647820 | MsG0280006487.01.T01:CDS |
| GACGGTGACGAGGGAGAGGT+TGG | 0.518695 | 2:-2647618 | MsG0280006487.01.T01:CDS |
| CAGGTTCATTGGTTGACCTA+GGG | 0.520104 | 2:+2647901 | None:intergenic |
| TGCGGTTGTTGCTGTGGATG+TGG | 0.520536 | 2:+2648035 | None:intergenic |
| GTGGTGGTGGTGATGTTGAA+AGG | 0.520802 | 2:-2647296 | MsG0280006487.01.T01:CDS |
| TCTTCTTCGCACCATTCATA+GGG | 0.520934 | 2:+2647487 | None:intergenic |
| AAGCTCCGCGAACGCTGCAC+AGG | 0.521459 | 2:+2647425 | None:intergenic |
| GTCGGATTCTTGTGCCCGAA+TGG | 0.522206 | 2:+2648388 | None:intergenic |
| GTCAACCAATGAACCTGTTA+GGG | 0.524013 | 2:-2647895 | MsG0280006487.01.T01:CDS |
| GGCTTAGCCCCAGCAGACTC+CGG | 0.527248 | 2:+2647801 | None:intergenic |
| ATGATAGCAGTGATGGTGAT+TGG | 0.532126 | 2:-2647383 | MsG0280006487.01.T01:CDS |
| AGTGGTAGTACGGGCACCAC+CGG | 0.535051 | 2:-2647655 | MsG0280006487.01.T01:CDS |
| CTGTGGTGGGTGGTTTGAGA+AGG | 0.537878 | 2:-2647122 | MsG0280006487.01.T01:CDS |
| GTGATTGGCGGGGTACCAAA+GGG | 0.538758 | 2:-2647368 | MsG0280006487.01.T01:CDS |
| TGCTACTTCTGTGCCTGCAA+TGG | 0.539629 | 2:-2647172 | MsG0280006487.01.T01:CDS |
| GTGGAAGAAGCTTCTGCTAG+TGG | 0.544361 | 2:-2647045 | MsG0280006487.01.T01:CDS |
| AAAGGAAATTGAATAGGTTG+CGG | 0.545323 | 2:+2648017 | None:intergenic |
| GTGGGTGGTTTGAGAAGGAG+AGG | 0.546300 | 2:-2647117 | MsG0280006487.01.T01:CDS |
| GGTAAGAAGGCTGTGGTGGG+TGG | 0.548348 | 2:-2647132 | MsG0280006487.01.T01:CDS |
| GTGAGACAGGGGAACGTGAA+CGG | 0.549407 | 2:-2647021 | MsG0280006487.01.T01:CDS |
| ATAGCGAAGGATTTGAAGAA+TGG | 0.549445 | 2:+2648274 | None:intergenic |
| AAATTCCCACTAAACCCTAA+AGG | 0.552901 | 2:+2647567 | None:intergenic |
| CGTGTAAGTCACGCGCGCTG+AGG | 0.553465 | 2:+2648426 | None:intergenic |
| GACCAATTGAGAGGCCTAGG+AGG | 0.554781 | 2:-2647272 | MsG0280006487.01.T01:CDS |
| ACAGGTTCATTGGTTGACCT+AGG | 0.556407 | 2:+2647900 | None:intergenic |
| AATGCCGAGGATAATATTGA+AGG | 0.557483 | 2:-2646991 | MsG0280006487.01.T01:CDS |
| TTCTTGTGCCCGAATGGCGA+AGG | 0.557741 | 2:+2648394 | None:intergenic |
| GCGAAGAAGAATGCTCGGAA+GGG | 0.558035 | 2:-2647474 | MsG0280006487.01.T01:CDS |
| ACCAATTGAGAGGCCTAGGA+GGG | 0.558221 | 2:-2647271 | MsG0280006487.01.T01:CDS |
| TAGCAGTGATGGTGATTGGC+GGG | 0.559217 | 2:-2647379 | MsG0280006487.01.T01:CDS |
| TGCAAGACGGCGATATTGAT+CGG | 0.559726 | 2:+2648229 | None:intergenic |
| TTGATGAGGAACAAAACAAT+GGG | 0.559786 | 2:-2647869 | MsG0280006487.01.T01:CDS |
| AGAAGACGGTGACGAGGGAG+AGG | 0.562730 | 2:-2647622 | MsG0280006487.01.T01:CDS |
| CGAAGAAGAATGCTCGGAAG+GGG | 0.563521 | 2:-2647473 | MsG0280006487.01.T01:CDS |
| TCAAACATGCCATAACAGTA+AGG | 0.564616 | 2:+2647741 | None:intergenic |
| AGGGGAACGTGAACGGGACA+GGG | 0.565414 | 2:-2647014 | MsG0280006487.01.T01:CDS |
| TCAATGGGTCTTCTTCGGAA+TGG | 0.566181 | 2:-2647536 | MsG0280006487.01.T01:CDS |
| GGTGACGAGGGAGAGGTTGG+TGG | 0.566487 | 2:-2647615 | MsG0280006487.01.T01:CDS |
| TAATGTTGTTGCAGATGACA+AGG | 0.568155 | 2:-2646917 | MsG0280006487.01.T01:CDS |
| GCCCAGGCCGGAGTCTGCTG+GGG | 0.569311 | 2:-2647808 | MsG0280006487.01.T01:CDS |
| CAATGAAACAAAGCAGACAT+AGG | 0.570623 | 2:+2647510 | None:intergenic |
| GTGCCCGAATGGCGAAGGAA+CGG | 0.570710 | 2:+2648399 | None:intergenic |
| AGCTGGTAAGAAGGCTGTGG+TGG | 0.571053 | 2:-2647136 | MsG0280006487.01.T01:CDS |
| GGTTGCGGTTGTGGTGGTAA+AGG | 0.574236 | 2:+2647999 | None:intergenic |
| TGCGAAGAAGAATGCTCGGA+AGG | 0.575964 | 2:-2647475 | MsG0280006487.01.T01:CDS |
| TGCTGTGGTTGCGGTTGTGG+TGG | 0.579718 | 2:+2647993 | None:intergenic |
| GAGAATGACAATGGTGGTGG+TGG | 0.580037 | 2:-2647225 | MsG0280006487.01.T01:CDS |
| AATCCCTTCAATATTATCCT+CGG | 0.583636 | 2:+2646987 | None:intergenic |
| GGATGAAAATGCTGTGGTTG+CGG | 0.583652 | 2:+2647984 | None:intergenic |
| GACTGGAGAAGACGGTGACG+AGG | 0.583753 | 2:-2647628 | MsG0280006487.01.T01:CDS |
| CCAAAGGGAGTAGGATGGGT+AGG | 0.584383 | 2:-2647353 | MsG0280006487.01.T01:CDS |
| GGTGGTGGTTGTGGTTGCGG+CGG | 0.586913 | 2:+2648062 | None:intergenic |
| GGTACCAAAGGGAGTAGGAT+GGG | 0.588927 | 2:-2647357 | MsG0280006487.01.T01:CDS |
| AAATGTTGAAGCTGGTAAGA+AGG | 0.589973 | 2:-2647145 | MsG0280006487.01.T01:CDS |
| AAGGAGGAAGAGAAGAAGAG+GGG | 0.592224 | 2:-2647328 | MsG0280006487.01.T01:CDS |
| ATGCCGAGGATAATATTGAA+GGG | 0.593077 | 2:-2646990 | MsG0280006487.01.T01:CDS |
| CCGGAGGTGACTGGAGAAGA+CGG | 0.593141 | 2:-2647636 | MsG0280006487.01.T01:CDS |
| ATAGGTTGCGGTTGTTGCTG+TGG | 0.593211 | 2:+2648029 | None:intergenic |
| GGGTAAGTTGGATTTGAATG+TGG | 0.594650 | 2:-2647082 | MsG0280006487.01.T01:CDS |
| ATTGATGAGGAACAAAACAA+TGG | 0.595375 | 2:-2647870 | MsG0280006487.01.T01:CDS |
| AGCCACTGAACTTCTTCTTG+CGG | 0.598213 | 2:-2648354 | MsG0280006487.01.T01:CDS |
| TCTGCTAGTGGAGTGAGACA+GGG | 0.598631 | 2:-2647033 | MsG0280006487.01.T01:CDS |
| GGGTACCAAAGGGAGTAGGA+TGG | 0.600804 | 2:-2647358 | MsG0280006487.01.T01:CDS |
| CCCTCTTACAATTCTGACAC+CGG | 0.604834 | 2:+2647688 | None:intergenic |
| CCGGTGTCAGAATTGTAAGA+GGG | 0.604978 | 2:-2647688 | MsG0280006487.01.T01:CDS |
| CCAATTGAGAGGCCTAGGAG+GGG | 0.606765 | 2:-2647270 | MsG0280006487.01.T01:CDS |
| GGGCCGAGTCATGTCAATGC+TGG | 0.607739 | 2:-2647849 | MsG0280006487.01.T01:CDS |
| CTCAGCGCGCGTGACTTACA+CGG | 0.610260 | 2:-2648425 | MsG0280006487.01.T01:CDS |
| AATTGAGAGGCCTAGGAGGG+GGG | 0.610392 | 2:-2647268 | MsG0280006487.01.T01:CDS |
| TTGACTTGAACAGAAGGAGG+AGG | 0.615506 | 2:+2647963 | None:intergenic |
| CAATATTCTGAGTATAGCGA+AGG | 0.617357 | 2:+2648261 | None:intergenic |
| TTGTCGTTGACTTGAACAGA+AGG | 0.617497 | 2:+2647957 | None:intergenic |
| ATGGTGTCAAATGTTGAAGC+TGG | 0.617929 | 2:-2647153 | MsG0280006487.01.T01:CDS |
| GTTTGACCGTCAGTTTCACC+GGG | 0.617980 | 2:+2647780 | None:intergenic |
| GCTAAGCCCGGTGAAACTGA+CGG | 0.618764 | 2:-2647786 | MsG0280006487.01.T01:CDS |
| TCACCAGCATTGACATGACT+CGG | 0.621622 | 2:+2647846 | None:intergenic |
| TCGTTGACTTGAACAGAAGG+AGG | 0.624401 | 2:+2647960 | None:intergenic |
| TTTACGTTGATTGCACACTC+CGG | 0.627775 | 2:-2647707 | MsG0280006487.01.T01:CDS |
| GGCGGGGTACCAAAGGGAGT+AGG | 0.631128 | 2:-2647362 | MsG0280006487.01.T01:CDS |
| GTTATCGACACTCTCTTAGC+CGG | 0.631145 | 2:-2648332 | MsG0280006487.01.T01:CDS |
| TGACAATGTGGTTGATGATG+AGG | 0.631213 | 2:-2647202 | MsG0280006487.01.T01:CDS |
| GCTGGTAAGAAGGCTGTGGT+GGG | 0.632182 | 2:-2647135 | MsG0280006487.01.T01:CDS |
| TCTTCTCCAGTCACCTCCGG+TGG | 0.632382 | 2:+2647639 | None:intergenic |
| TGAATGGATGGAAGCAACAG+AGG | 0.633889 | 2:-2648485 | MsG0280006487.01.T01:CDS |
| AGTGGCTTCGAATCTCGGGT+CGG | 0.636739 | 2:+2648370 | None:intergenic |
| GGTAGTACGGGCACCACCGG+AGG | 0.640935 | 2:-2647652 | MsG0280006487.01.T01:CDS |
| ATAGCAGTGATGGTGATTGG+CGG | 0.641839 | 2:-2647380 | MsG0280006487.01.T01:CDS |
| CATGCCATAACAGTAAGGAC+AGG | 0.644058 | 2:+2647746 | None:intergenic |
| ATGGTGCGAAGAAGAATGCT+CGG | 0.644458 | 2:-2647479 | MsG0280006487.01.T01:CDS |
| TTGAAAGGAGACCAATTGAG+AGG | 0.647944 | 2:-2647281 | MsG0280006487.01.T01:CDS |
| GATGATGATGATAGCAGTGA+TGG | 0.649786 | 2:-2647390 | MsG0280006487.01.T01:CDS |
| GCTGAGAATGACAATGGTGG+TGG | 0.654227 | 2:-2647228 | MsG0280006487.01.T01:CDS |
| TGACGGTCAAACTTTCTGGA+CGG | 0.654449 | 2:-2647769 | MsG0280006487.01.T01:CDS |
| CTGCTAGTGGAGTGAGACAG+GGG | 0.659459 | 2:-2647032 | MsG0280006487.01.T01:CDS |
| GGTCAAGGAGGATTGCAAGA+CGG | 0.660142 | 2:+2648216 | None:intergenic |
| ACTGGAGAAGACGGTGACGA+GGG | 0.666817 | 2:-2647627 | MsG0280006487.01.T01:CDS |
| TGTGGAGTTCAGCAATGAGG+TGG | 0.670708 | 2:-2647064 | MsG0280006487.01.T01:CDS |
| AACCGCAAGAAGAAGTTCAG+TGG | 0.670841 | 2:+2648352 | None:intergenic |
| GGTTGTTGCTGTGGATGTGG+TGG | 0.676015 | 2:+2648038 | None:intergenic |
| CGGTGTCAGAATTGTAAGAG+GGG | 0.678004 | 2:-2647687 | MsG0280006487.01.T01:CDS |
| GGTTACGGTTCGGGTCAAGG+AGG | 0.679710 | 2:+2648204 | None:intergenic |
| TGAAGCTGGTAAGAAGGCTG+TGG | 0.683764 | 2:-2647139 | MsG0280006487.01.T01:CDS |
| GGAGGAGGATGAAAATGCTG+TGG | 0.684139 | 2:+2647978 | None:intergenic |
| AGCAGTGATGGTGATTGGCG+GGG | 0.685255 | 2:-2647378 | MsG0280006487.01.T01:CDS |
| ACAGAGGTGAAGCTGAACGA+TGG | 0.691288 | 2:-2648469 | MsG0280006487.01.T01:CDS |
| TGGTGGTGGTGGTGACAATG+TGG | 0.696568 | 2:-2647214 | MsG0280006487.01.T01:CDS |
| ACCTGTTAGGGTGATTGATG+AGG | 0.704254 | 2:-2647883 | MsG0280006487.01.T01:CDS |
| GGTAATGCTGAGAATGACAA+TGG | 0.707753 | 2:-2647234 | MsG0280006487.01.T01:CDS |
| GAATGTGGAGTTCAGCAATG+AGG | 0.710179 | 2:-2647067 | MsG0280006487.01.T01:CDS |
| GAACGGGACAGGGAATGCCG+AGG | 0.720567 | 2:-2647004 | MsG0280006487.01.T01:CDS |
| AATGCTGAGAATGACAATGG+TGG | 0.774129 | 2:-2647231 | MsG0280006487.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATGATCATAATAACTAAA+AGG | + | Chr2:2647938-2647957 | None:intergenic | 20.0% |
| !!! | GGAATTTTAAGGATATCAAT+GGG | - | Chr2:2647834-2647853 | MsG0280006487.01.T01:CDS | 25.0% |
| AAAGGAAATTGAATAGGTTG+CGG | + | Chr2:2647371-2647390 | None:intergenic | 30.0% | |
| AATCCCTTCAATATTATCCT+CGG | + | Chr2:2648401-2648420 | None:intergenic | 30.0% | |
| AGGATAATATTGAAGGGATT+GGG | - | Chr2:2648401-2648420 | MsG0280006487.01.T01:CDS | 30.0% | |
| ATTGATGAGGAACAAAACAA+TGG | - | Chr2:2647515-2647534 | MsG0280006487.01.T01:CDS | 30.0% | |
| CTTATGAGGATTTGAGAAAA+TGG | + | Chr2:2647255-2647274 | None:intergenic | 30.0% | |
| TCATACAAAGCTTTCTTATG+AGG | + | Chr2:2647269-2647288 | None:intergenic | 30.0% | |
| TCTGCAACAACATTAAGAAT+TGG | + | Chr2:2648463-2648482 | None:intergenic | 30.0% | |
| TTGATGAGGAACAAAACAAT+GGG | - | Chr2:2647516-2647535 | MsG0280006487.01.T01:CDS | 30.0% | |
| !! | GGGAATTTTAAGGATATCAA+TGG | - | Chr2:2647833-2647852 | MsG0280006487.01.T01:CDS | 30.0% |
| !!! | ATTTTCCTTTAGGGTTTAGT+GGG | - | Chr2:2647813-2647832 | MsG0280006487.01.T01:CDS | 30.0% |
| AAATGTTGAAGCTGGTAAGA+AGG | - | Chr2:2648240-2648259 | MsG0280006487.01.T01:CDS | 35.0% | |
| AAATTCCCACTAAACCCTAA+AGG | + | Chr2:2647821-2647840 | None:intergenic | 35.0% | |
| AATGCCGAGGATAATATTGA+AGG | - | Chr2:2648394-2648413 | MsG0280006487.01.T01:CDS | 35.0% | |
| AGAGAAAAAACCAAAACCCT+AGG | - | Chr2:2647468-2647487 | MsG0280006487.01.T01:CDS | 35.0% | |
| ATAGCGAAGGATTTGAAGAA+TGG | + | Chr2:2647114-2647133 | None:intergenic | 35.0% | |
| ATGCCGAGGATAATATTGAA+GGG | - | Chr2:2648395-2648414 | MsG0280006487.01.T01:CDS | 35.0% | |
| CAATATTCTGAGTATAGCGA+AGG | + | Chr2:2647127-2647146 | None:intergenic | 35.0% | |
| CAATGAAACAAAGCAGACAT+AGG | + | Chr2:2647878-2647897 | None:intergenic | 35.0% | |
| GAGGATAATATTGAAGGGAT+TGG | - | Chr2:2648400-2648419 | MsG0280006487.01.T01:CDS | 35.0% | |
| GGTGGTAAAGGAAATTGAAT+AGG | + | Chr2:2647377-2647396 | None:intergenic | 35.0% | |
| TAAGAATTGGCAAGCTACTA+AGG | + | Chr2:2648450-2648469 | None:intergenic | 35.0% | |
| TAATGTTGTTGCAGATGACA+AGG | - | Chr2:2648468-2648487 | MsG0280006487.01.T01:CDS | 35.0% | |
| TCAAACATGCCATAACAGTA+AGG | + | Chr2:2647647-2647666 | None:intergenic | 35.0% | |
| TTGTTTCATTGCCCTATGAA+TGG | - | Chr2:2647887-2647906 | MsG0280006487.01.T01:CDS | 35.0% | |
| ! | AGGGTTTAGTGGGAATTTTA+AGG | - | Chr2:2647823-2647842 | MsG0280006487.01.T01:CDS | 35.0% |
| !! | TTCTTTGATTCTAGCTTCAC+CGG | + | Chr2:2647075-2647094 | None:intergenic | 35.0% |
| !!! | AAGGGATTGGGTTTTTTGAA+GGG | - | Chr2:2648413-2648432 | MsG0280006487.01.T01:CDS | 35.0% |
| !!! | CATTTTCCTTTAGGGTTTAG+TGG | - | Chr2:2647812-2647831 | MsG0280006487.01.T01:CDS | 35.0% |
| !!! | GTGGTTTTTTCTGTAGCTTT+GGG | - | Chr2:2647789-2647808 | MsG0280006487.01.T01:CDS | 35.0% |
| AAACTGACGGTCAAACTTTC+TGG | - | Chr2:2647612-2647631 | MsG0280006487.01.T01:CDS | 40.0% | |
| AATCACCCTAACAGGTTCAT+TGG | + | Chr2:2647498-2647517 | None:intergenic | 40.0% | |
| AATGCTGAGAATGACAATGG+TGG | - | Chr2:2648154-2648173 | MsG0280006487.01.T01:CDS | 40.0% | |
| GGATATCAATGGGTCTTCTT+CGG | - | Chr2:2647844-2647863 | MsG0280006487.01.T01:CDS | 40.0% | |
| GGTAATGCTGAGAATGACAA+TGG | - | Chr2:2648151-2648170 | MsG0280006487.01.T01:CDS | 40.0% | |
| GTCAACCAATGAACCTGTTA+GGG | - | Chr2:2647490-2647509 | MsG0280006487.01.T01:CDS | 40.0% | |
| GTGCAATCAACGTAAACCTT+AGG | + | Chr2:2647674-2647693 | None:intergenic | 40.0% | |
| TCAACATTTGACACCATTGC+AGG | + | Chr2:2648229-2648248 | None:intergenic | 40.0% | |
| TCTTCTTCGCACCATTCATA+GGG | + | Chr2:2647901-2647920 | None:intergenic | 40.0% | |
| TGCTGGAAATTTGGGTAAGT+TGG | - | Chr2:2648291-2648310 | MsG0280006487.01.T01:CDS | 40.0% | |
| TGGCATGTTTGAGTATCCTA+AGG | - | Chr2:2647655-2647674 | MsG0280006487.01.T01:CDS | 40.0% | |
| TTCTTCTTCGCACCATTCAT+AGG | + | Chr2:2647902-2647921 | None:intergenic | 40.0% | |
| TTGAAAGGAGACCAATTGAG+AGG | - | Chr2:2648104-2648123 | MsG0280006487.01.T01:CDS | 40.0% | |
| ! | ATGATAGCAGTGATGGTGAT+TGG | - | Chr2:2648002-2648021 | MsG0280006487.01.T01:CDS | 40.0% |
| ! | ATGGTGTCAAATGTTGAAGC+TGG | - | Chr2:2648232-2648251 | MsG0280006487.01.T01:CDS | 40.0% |
| ! | GATGATGATGATAGCAGTGA+TGG | - | Chr2:2647995-2648014 | MsG0280006487.01.T01:CDS | 40.0% |
| ! | GGGTAAGTTGGATTTGAATG+TGG | - | Chr2:2648303-2648322 | MsG0280006487.01.T01:CDS | 40.0% |
| ! | GTTTTCATGCAGTGGTAGTA+CGG | - | Chr2:2647720-2647739 | MsG0280006487.01.T01:CDS | 40.0% |
| ! | TTTACGTTGATTGCACACTC+CGG | - | Chr2:2647678-2647697 | MsG0280006487.01.T01:CDS | 40.0% |
| ! | TTTTCATGCAGTGGTAGTAC+GGG | - | Chr2:2647721-2647740 | MsG0280006487.01.T01:CDS | 40.0% |
| !! | GCTTTGGGCATTTTCCTTTA+GGG | - | Chr2:2647804-2647823 | MsG0280006487.01.T01:CDS | 40.0% |
| !! | TGACAATGTGGTTGATGATG+AGG | - | Chr2:2648183-2648202 | MsG0280006487.01.T01:CDS | 40.0% |
| !! | TTGTCGTTGACTTGAACAGA+AGG | + | Chr2:2647431-2647450 | None:intergenic | 40.0% |
| !!! | AGCTTTGGGCATTTTCCTTT+AGG | - | Chr2:2647803-2647822 | MsG0280006487.01.T01:CDS | 40.0% |
| !!! | GAAGGGATTGGGTTTTTTGA+AGG | - | Chr2:2648412-2648431 | MsG0280006487.01.T01:CDS | 40.0% |
| !!! | GGTGGTTTTTTCTGTAGCTT+TGG | - | Chr2:2647788-2647807 | MsG0280006487.01.T01:CDS | 40.0% |
| AACCGCAAGAAGAAGTTCAG+TGG | + | Chr2:2647036-2647055 | None:intergenic | 45.0% | |
| AAGGAGGAAGAGAAGAAGAG+GGG | - | Chr2:2648057-2648076 | MsG0280006487.01.T01:CDS | 45.0% | |
| ACCTGTTAGGGTGATTGATG+AGG | - | Chr2:2647502-2647521 | MsG0280006487.01.T01:CDS | 45.0% | |
| AGAAGGAGGAAGAGAAGAAG+AGG | - | Chr2:2648055-2648074 | MsG0280006487.01.T01:CDS | 45.0% | |
| AGCCACTGAACTTCTTCTTG+CGG | - | Chr2:2647031-2647050 | MsG0280006487.01.T01:CDS | 45.0% | |
| AGTTCAGTGGCTTCGAATCT+CGG | + | Chr2:2647023-2647042 | None:intergenic | 45.0% | |
| AGTTTGACCGTCAGTTTCAC+CGG | + | Chr2:2647609-2647628 | None:intergenic | 45.0% | |
| ATGGTGCGAAGAAGAATGCT+CGG | - | Chr2:2647906-2647925 | MsG0280006487.01.T01:CDS | 45.0% | |
| CATGAGCAGCATAAGCAAAC+GGG | + | Chr2:2647205-2647224 | None:intergenic | 45.0% | |
| CATGCCATAACAGTAAGGAC+AGG | + | Chr2:2647642-2647661 | None:intergenic | 45.0% | |
| CCCTCTTACAATTCTGACAC+CGG | + | Chr2:2647700-2647719 | None:intergenic | 45.0% | |
| GAAGGAGGAAGAGAAGAAGA+GGG | - | Chr2:2648056-2648075 | MsG0280006487.01.T01:CDS | 45.0% | |
| GAATGTGGAGTTCAGCAATG+AGG | - | Chr2:2648318-2648337 | MsG0280006487.01.T01:CDS | 45.0% | |
| GCATGAGCAGCATAAGCAAA+CGG | + | Chr2:2647206-2647225 | None:intergenic | 45.0% | |
| GGATGAAAATGCTGTGGTTG+CGG | + | Chr2:2647404-2647423 | None:intergenic | 45.0% | |
| GGTCAACCAATGAACCTGTT+AGG | - | Chr2:2647489-2647508 | MsG0280006487.01.T01:CDS | 45.0% | |
| GTTATCGACACTCTCTTAGC+CGG | - | Chr2:2647053-2647072 | MsG0280006487.01.T01:CDS | 45.0% | |
| TCAATGCTGGTGAGTCTACT+GGG | - | Chr2:2647549-2647568 | MsG0280006487.01.T01:CDS | 45.0% | |
| TCAATGGGTCTTCTTCGGAA+TGG | - | Chr2:2647849-2647868 | MsG0280006487.01.T01:CDS | 45.0% | |
| TCCTCATCAATCACCCTAAC+AGG | + | Chr2:2647506-2647525 | None:intergenic | 45.0% | |
| TCTCTCTTGTTCACGATGCT+TGG | - | Chr2:2647228-2647247 | MsG0280006487.01.T01:CDS | 45.0% | |
| TGACGGTCAAACTTTCTGGA+CGG | - | Chr2:2647616-2647635 | MsG0280006487.01.T01:CDS | 45.0% | |
| TGCAAGACGGCGATATTGAT+CGG | + | Chr2:2647159-2647178 | None:intergenic | 45.0% | |
| ! | AAGAGAAGAAGAGGGGCTTT+TGG | - | Chr2:2648064-2648083 | MsG0280006487.01.T01:CDS | 45.0% |
| ! | ACAGGTTCATTGGTTGACCT+AGG | + | Chr2:2647488-2647507 | None:intergenic | 45.0% |
| ! | ATAGCAGTGATGGTGATTGG+CGG | - | Chr2:2648005-2648024 | MsG0280006487.01.T01:CDS | 45.0% |
| ! | CAGGTTCATTGGTTGACCTA+GGG | + | Chr2:2647487-2647506 | None:intergenic | 45.0% |
| ! | CCGGTGTCAGAATTGTAAGA+GGG | - | Chr2:2647697-2647716 | MsG0280006487.01.T01:CDS | 45.0% |
| ! | CGGTGTCAGAATTGTAAGAG+GGG | - | Chr2:2647698-2647717 | MsG0280006487.01.T01:CDS | 45.0% |
| ! | TAAGAGGGGTTTTCATGCAG+TGG | - | Chr2:2647712-2647731 | MsG0280006487.01.T01:CDS | 45.0% |
| ! | TCCGGTGTCAGAATTGTAAG+AGG | - | Chr2:2647696-2647715 | MsG0280006487.01.T01:CDS | 45.0% |
| ! | TTGACTTGAACAGAAGGAGG+AGG | + | Chr2:2647425-2647444 | None:intergenic | 45.0% |
| !! | AAGGAGAGGTGCTGGAAATT+TGG | - | Chr2:2648282-2648301 | MsG0280006487.01.T01:CDS | 45.0% |
| !! | AGGAGAGGTGCTGGAAATTT+GGG | - | Chr2:2648283-2648302 | MsG0280006487.01.T01:CDS | 45.0% |
| !! | CAGCATAAGCAAACGGGTTA+CGG | + | Chr2:2647199-2647218 | None:intergenic | 45.0% |
| !! | CATTGGTTGACCTAGGGTTT+TGG | + | Chr2:2647481-2647500 | None:intergenic | 45.0% |
| !! | TAAGCAAACGGGTTACGGTT+CGG | + | Chr2:2647194-2647213 | None:intergenic | 45.0% |
| !! | TCACCAGCATTGACATGACT+CGG | + | Chr2:2647542-2647561 | None:intergenic | 45.0% |
| !! | TCGTTGACTTGAACAGAAGG+AGG | + | Chr2:2647428-2647447 | None:intergenic | 45.0% |
| AAATGCTGTGGTTGCGGTTG+TGG | + | Chr2:2647398-2647417 | None:intergenic | 50.0% | |
| ACAGAGGTGAAGCTGAACGA+TGG | - | Chr2:2646916-2646935 | MsG0280006487.01.T01:CDS | 50.0% | |
| ACCAATTGAGAGGCCTAGGA+GGG | - | Chr2:2648114-2648133 | MsG0280006487.01.T01:CDS | 50.0% | |
| ACGGCCTGTCCTTACTGTTA+TGG | - | Chr2:2647635-2647654 | MsG0280006487.01.T01:CDS | 50.0% | |
| AGGAGGGGGGTTCAACAAAA+TGG | - | Chr2:2648130-2648149 | MsG0280006487.01.T01:CDS | 50.0% | |
| ATAGGTTGCGGTTGTTGCTG+TGG | + | Chr2:2647359-2647378 | None:intergenic | 50.0% | |
| CGAAGAAGAATGCTCGGAAG+GGG | - | Chr2:2647912-2647931 | MsG0280006487.01.T01:CDS | 50.0% | |
| GCGAAGAAGAATGCTCGGAA+GGG | - | Chr2:2647911-2647930 | MsG0280006487.01.T01:CDS | 50.0% | |
| GCTGAGAATGACAATGGTGG+TGG | - | Chr2:2648157-2648176 | MsG0280006487.01.T01:CDS | 50.0% | |
| GGAGGAGGATGAAAATGCTG+TGG | + | Chr2:2647410-2647429 | None:intergenic | 50.0% | |
| GGTACCAAAGGGAGTAGGAT+GGG | - | Chr2:2648028-2648047 | MsG0280006487.01.T01:CDS | 50.0% | |
| GGTCAAGGAGGATTGCAAGA+CGG | + | Chr2:2647172-2647191 | None:intergenic | 50.0% | |
| GTCAATGCTGGTGAGTCTAC+TGG | - | Chr2:2647548-2647567 | MsG0280006487.01.T01:CDS | 50.0% | |
| GTGGAAGAAGCTTCTGCTAG+TGG | - | Chr2:2648340-2648359 | MsG0280006487.01.T01:CDS | 50.0% | |
| GTTCAGTGGCTTCGAATCTC+GGG | + | Chr2:2647022-2647041 | None:intergenic | 50.0% | |
| GTTTGACCGTCAGTTTCACC+GGG | + | Chr2:2647608-2647627 | None:intergenic | 50.0% | |
| TCTGCTAGTGGAGTGAGACA+GGG | - | Chr2:2648352-2648371 | MsG0280006487.01.T01:CDS | 50.0% | |
| TGAAGCTGGTAAGAAGGCTG+TGG | - | Chr2:2648246-2648265 | MsG0280006487.01.T01:CDS | 50.0% | |
| TGCGAAGAAGAATGCTCGGA+AGG | - | Chr2:2647910-2647929 | MsG0280006487.01.T01:CDS | 50.0% | |
| TGTGGAGTTCAGCAATGAGG+TGG | - | Chr2:2648321-2648340 | MsG0280006487.01.T01:CDS | 50.0% | |
| TTCTGCTAGTGGAGTGAGAC+AGG | - | Chr2:2648351-2648370 | MsG0280006487.01.T01:CDS | 50.0% | |
| ! | AGAAGAAGAGGGGCTTTTGG+TGG | - | Chr2:2648067-2648086 | MsG0280006487.01.T01:CDS | 50.0% |
| ! | TAGCAGTGATGGTGATTGGC+GGG | - | Chr2:2648006-2648025 | MsG0280006487.01.T01:CDS | 50.0% |
| ! | TGCTACTTCTGTGCCTGCAA+TGG | - | Chr2:2648213-2648232 | MsG0280006487.01.T01:CDS | 50.0% |
| ! | TTTTGTTGAACCCCCCTCCT+AGG | + | Chr2:2648130-2648149 | None:intergenic | 50.0% |
| !! | AAGCAAACGGGTTACGGTTC+GGG | + | Chr2:2647193-2647212 | None:intergenic | 50.0% |
| !! | GAGAATGACAATGGTGGTGG+TGG | - | Chr2:2648160-2648179 | MsG0280006487.01.T01:CDS | 50.0% |
| !! | GTGGTGGTGGTGATGTTGAA+AGG | - | Chr2:2648089-2648108 | MsG0280006487.01.T01:CDS | 50.0% |
| AATTGAGAGGCCTAGGAGGG+GGG | - | Chr2:2648117-2648136 | MsG0280006487.01.T01:CDS | 55.0% | |
| ACTGGAGAAGACGGTGACGA+GGG | - | Chr2:2647758-2647777 | MsG0280006487.01.T01:CDS | 55.0% | |
| AGCTGGTAAGAAGGCTGTGG+TGG | - | Chr2:2648249-2648268 | MsG0280006487.01.T01:CDS | 55.0% | |
| AGTGGCTTCGAATCTCGGGT+CGG | + | Chr2:2647018-2647037 | None:intergenic | 55.0% | |
| CAATTGAGAGGCCTAGGAGG+GGG | - | Chr2:2648116-2648135 | MsG0280006487.01.T01:CDS | 55.0% | |
| CCAAAGGGAGTAGGATGGGT+AGG | - | Chr2:2648032-2648051 | MsG0280006487.01.T01:CDS | 55.0% | |
| CCAATTGAGAGGCCTAGGAG+GGG | - | Chr2:2648115-2648134 | MsG0280006487.01.T01:CDS | 55.0% | |
| CCTACCCATCCTACTCCCTT+TGG | + | Chr2:2648035-2648054 | None:intergenic | 55.0% | |
| CTGCTAGTGGAGTGAGACAG+GGG | - | Chr2:2648353-2648372 | MsG0280006487.01.T01:CDS | 55.0% | |
| GACCAATTGAGAGGCCTAGG+AGG | - | Chr2:2648113-2648132 | MsG0280006487.01.T01:CDS | 55.0% | |
| GCTAAGCCCGGTGAAACTGA+CGG | - | Chr2:2647599-2647618 | MsG0280006487.01.T01:CDS | 55.0% | |
| GCTGGTAAGAAGGCTGTGGT+GGG | - | Chr2:2648250-2648269 | MsG0280006487.01.T01:CDS | 55.0% | |
| GGAGACCAATTGAGAGGCCT+AGG | - | Chr2:2648110-2648129 | MsG0280006487.01.T01:CDS | 55.0% | |
| GGAGTAGGATGGGTAGGAGA+AGG | - | Chr2:2648038-2648057 | MsG0280006487.01.T01:CDS | 55.0% | |
| GGGTACCAAAGGGAGTAGGA+TGG | - | Chr2:2648027-2648046 | MsG0280006487.01.T01:CDS | 55.0% | |
| GGTTGCGGTTGTGGTGGTAA+AGG | + | Chr2:2647389-2647408 | None:intergenic | 55.0% | |
| GGTTGTTGCTGTGGATGTGG+TGG | + | Chr2:2647350-2647369 | None:intergenic | 55.0% | |
| GTAGGATGGGTAGGAGAAGG+AGG | - | Chr2:2648041-2648060 | MsG0280006487.01.T01:CDS | 55.0% | |
| GTCGGATTCTTGTGCCCGAA+TGG | + | Chr2:2647000-2647019 | None:intergenic | 55.0% | |
| GTGAGACAGGGGAACGTGAA+CGG | - | Chr2:2648364-2648383 | MsG0280006487.01.T01:CDS | 55.0% | |
| GTGGGTGGTTTGAGAAGGAG+AGG | - | Chr2:2648268-2648287 | MsG0280006487.01.T01:CDS | 55.0% | |
| TGAGACAGGGGAACGTGAAC+GGG | - | Chr2:2648365-2648384 | MsG0280006487.01.T01:CDS | 55.0% | |
| TGATACCTGTGCAGCGTTCG+CGG | - | Chr2:2647955-2647974 | MsG0280006487.01.T01:CDS | 55.0% | |
| TGCGGTTGTTGCTGTGGATG+TGG | + | Chr2:2647353-2647372 | None:intergenic | 55.0% | |
| TGTTGCTGTGGATGTGGTGG+TGG | + | Chr2:2647347-2647366 | None:intergenic | 55.0% | |
| TTCTTGTGCCCGAATGGCGA+AGG | + | Chr2:2646994-2647013 | None:intergenic | 55.0% | |
| ! | AGAAGAGGGGCTTTTGGTGG+TGG | - | Chr2:2648070-2648089 | MsG0280006487.01.T01:CDS | 55.0% |
| ! | AGCAGTGATGGTGATTGGCG+GGG | - | Chr2:2648007-2648026 | MsG0280006487.01.T01:CDS | 55.0% |
| ! | GGTTTGAGAAGGAGAGGTGC+TGG | - | Chr2:2648274-2648293 | MsG0280006487.01.T01:CDS | 55.0% |
| ! | GTGATTGGCGGGGTACCAAA+GGG | - | Chr2:2648017-2648036 | MsG0280006487.01.T01:CDS | 55.0% |
| !! | CTGTGGTGGGTGGTTTGAGA+AGG | - | Chr2:2648263-2648282 | MsG0280006487.01.T01:CDS | 55.0% |
| !! | TGGTGGTGGTGGTGACAATG+TGG | - | Chr2:2648171-2648190 | MsG0280006487.01.T01:CDS | 55.0% |
| ACGCGCGCTGAGGAGTTTGT+TGG | + | Chr2:2646952-2646971 | None:intergenic | 60.0% | |
| AGAAGACGGTGACGAGGGAG+AGG | - | Chr2:2647763-2647782 | MsG0280006487.01.T01:CDS | 60.0% | |
| AGGGGAACGTGAACGGGACA+GGG | - | Chr2:2648371-2648390 | MsG0280006487.01.T01:CDS | 60.0% | |
| AGTGGTAGTACGGGCACCAC+CGG | - | Chr2:2647730-2647749 | MsG0280006487.01.T01:CDS | 60.0% | |
| CCCCTCCTAGGCCTCTCAAT+TGG | + | Chr2:2648118-2648137 | None:intergenic | 60.0% | |
| CCGGAGGTGACTGGAGAAGA+CGG | - | Chr2:2647749-2647768 | MsG0280006487.01.T01:CDS | 60.0% | |
| CCGTCTTCTCCAGTCACCTC+CGG | + | Chr2:2647752-2647771 | None:intergenic | 60.0% | |
| CTCAGCGCGCGTGACTTACA+CGG | - | Chr2:2646960-2646979 | MsG0280006487.01.T01:CDS | 60.0% | |
| CTGGTGAGTCTACTGGGCCT+AGG | - | Chr2:2647555-2647574 | MsG0280006487.01.T01:CDS | 60.0% | |
| GACTGGAGAAGACGGTGACG+AGG | - | Chr2:2647757-2647776 | MsG0280006487.01.T01:CDS | 60.0% | |
| GGGCCGAGTCATGTCAATGC+TGG | - | Chr2:2647536-2647555 | MsG0280006487.01.T01:CDS | 60.0% | |
| GTGCCCGAATGGCGAAGGAA+CGG | + | Chr2:2646989-2647008 | None:intergenic | 60.0% | |
| TCTTCTCCAGTCACCTCCGG+TGG | + | Chr2:2647749-2647768 | None:intergenic | 60.0% | |
| TGCCCGAATGGCGAAGGAAC+GGG | + | Chr2:2646988-2647007 | None:intergenic | 60.0% | |
| TGCTGTGGTTGCGGTTGTGG+TGG | + | Chr2:2647395-2647414 | None:intergenic | 60.0% | |
| ! | ACGGGTTACGGTTCGGGTCA+AGG | + | Chr2:2647187-2647206 | None:intergenic | 60.0% |
| ! | GGTAAGAAGGCTGTGGTGGG+TGG | - | Chr2:2648253-2648272 | MsG0280006487.01.T01:CDS | 60.0% |
| ! | GGTGATTGGCGGGGTACCAA+AGG | - | Chr2:2648016-2648035 | MsG0280006487.01.T01:CDS | 60.0% |
| ! | GGTTACGGTTCGGGTCAAGG+AGG | + | Chr2:2647184-2647203 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGGTTGTGGTTG+CGG | + | Chr2:2647329-2647348 | None:intergenic | 60.0% |
| !! | TGCTGTGGATGTGGTGGTGG+TGG | + | Chr2:2647344-2647363 | None:intergenic | 60.0% |
| !! | TGTGGATGTGGTGGTGGTGG+TGG | + | Chr2:2647341-2647360 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGTTG+TGG | + | Chr2:2647335-2647354 | None:intergenic | 60.0% |
| !!! | AGAGGGGCTTTTGGTGGTGG+TGG | - | Chr2:2648073-2648092 | MsG0280006487.01.T01:CDS | 60.0% |
| AAGCTCCGCGAACGCTGCAC+AGG | + | Chr2:2647963-2647982 | None:intergenic | 65.0% | |
| AGTCTACTGGGCCTAGGCCC+AGG | - | Chr2:2647561-2647580 | MsG0280006487.01.T01:CDS | 65.0% | |
| CAGGGGAACGTGAACGGGAC+AGG | - | Chr2:2648370-2648389 | MsG0280006487.01.T01:CDS | 65.0% | |
| CGCCCGTTCCTTCGCCATTC+GGG | - | Chr2:2646983-2647002 | MsG0280006487.01.T01:CDS | 65.0% | |
| CGTGTAAGTCACGCGCGCTG+AGG | + | Chr2:2646962-2646981 | None:intergenic | 65.0% | |
| GAACGGGACAGGGAATGCCG+AGG | - | Chr2:2648381-2648400 | MsG0280006487.01.T01:CDS | 65.0% | |
| GACGGTGACGAGGGAGAGGT+TGG | - | Chr2:2647767-2647786 | MsG0280006487.01.T01:CDS | 65.0% | |
| GAGTCTGCTGGGGCTAAGCC+CGG | - | Chr2:2647587-2647606 | MsG0280006487.01.T01:CDS | 65.0% | |
| GCGCCCGTTCCTTCGCCATT+CGG | - | Chr2:2646982-2647001 | MsG0280006487.01.T01:CDS | 65.0% | |
| GGCTTAGCCCCAGCAGACTC+CGG | + | Chr2:2647587-2647606 | None:intergenic | 65.0% | |
| GGTGACGAGGGAGAGGTTGG+TGG | - | Chr2:2647770-2647789 | MsG0280006487.01.T01:CDS | 65.0% | |
| ! | GGCGGGGTACCAAAGGGAGT+AGG | - | Chr2:2648023-2648042 | MsG0280006487.01.T01:CDS | 65.0% |
| ! | GGTGGTGGTTGTGGTTGCGG+CGG | + | Chr2:2647326-2647345 | None:intergenic | 65.0% |
| !!! | GGGGCTTTTGGTGGTGGTGG+TGG | - | Chr2:2648076-2648095 | MsG0280006487.01.T01:CDS | 65.0% |
| GGTAGTACGGGCACCACCGG+AGG | - | Chr2:2647733-2647752 | MsG0280006487.01.T01:CDS | 70.0% | |
| GGTGGTTGTGGTTGCGGCGG+TGG | + | Chr2:2647323-2647342 | None:intergenic | 70.0% | |
| GGTTGTGGTTGCGGCGGTGG+TGG | + | Chr2:2647320-2647339 | None:intergenic | 70.0% | |
| TACTGGGCCTAGGCCCAGGC+CGG | - | Chr2:2647565-2647584 | MsG0280006487.01.T01:CDS | 70.0% | |
| ! | TGTGGTTGCGGCGGTGGTGG+TGG | + | Chr2:2647317-2647336 | None:intergenic | 70.0% |
| AGCCCCAGCAGACTCCGGCC+TGG | + | Chr2:2647582-2647601 | None:intergenic | 75.0% | |
| AGGCCCAGGCCGGAGTCTGC+TGG | - | Chr2:2647575-2647594 | MsG0280006487.01.T01:CDS | 75.0% | |
| CGGGCACCACCGGAGGTGAC+TGG | - | Chr2:2647740-2647759 | MsG0280006487.01.T01:CDS | 75.0% | |
| GCAGACTCCGGCCTGGGCCT+AGG | + | Chr2:2647575-2647594 | None:intergenic | 75.0% | |
| GCCCAGGCCGGAGTCTGCTG+GGG | - | Chr2:2647577-2647596 | MsG0280006487.01.T01:CDS | 75.0% | |
| GCCCCAGCAGACTCCGGCCT+GGG | + | Chr2:2647581-2647600 | None:intergenic | 75.0% | |
| GGCCCAGGCCGGAGTCTGCT+GGG | - | Chr2:2647576-2647595 | MsG0280006487.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 2646903 | 2648504 | 2646903 | ID=MsG0280006487.01;Name=MsG0280006487.01 |
| Chr2 | mRNA | 2646903 | 2648504 | 2646903 | ID=MsG0280006487.01.T01;Parent=MsG0280006487.01;Name=MsG0280006487.01.T01;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|533 |
| Chr2 | exon | 2646903 | 2648504 | 2646903 | ID=MsG0280006487.01.T01:exon:506;Parent=MsG0280006487.01.T01 |
| Chr2 | CDS | 2646903 | 2648504 | 2646903 | ID=MsG0280006487.01.T01:cds;Parent=MsG0280006487.01.T01 |
| Gene Sequence |
| Protein sequence |
