Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021013.01.T01 | XP_013456138.1 | 98.837 | 258 | 3 | 0 | 1 | 258 | 1 | 258 | 0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021013.01.T01 | O48818 | 82.49 | 257 | 45 | 0 | 2 | 258 | 1 | 257 | 6.79E-162 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021013.01.T01 | A0A072UK92 | 98.837 | 258 | 3 | 0 | 1 | 258 | 1 | 258 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048311.01 | MsG0480021013.01 | 0.800847 | 1.189547e-48 | 5.596722e-46 |
| MsG0080048701.01 | MsG0480021013.01 | 0.832086 | 1.155299e-55 | 1.277892e-52 |
| MsG0080048781.01 | MsG0480021013.01 | 0.814120 | 1.811563e-51 | 1.205077e-48 |
| MsG0080048996.01 | MsG0480021013.01 | 0.865325 | 6.409985e-65 | 2.076927e-61 |
| MsG0080049140.01 | MsG0480021013.01 | 0.862802 | 3.915502e-64 | 1.161545e-60 |
| MsG0180000111.01 | MsG0480021013.01 | 0.864208 | 1.434282e-64 | 4.466849e-61 |
| MsG0180000314.01 | MsG0480021013.01 | 0.813805 | 2.124858e-51 | 1.401532e-48 |
| MsG0180000348.01 | MsG0480021013.01 | 0.800128 | 1.666262e-48 | 7.697831e-46 |
| MsG0180000353.01 | MsG0480021013.01 | 0.823040 | 1.715614e-53 | 1.460800e-50 |
| MsG0180000360.01 | MsG0480021013.01 | 0.846705 | 1.836343e-59 | 3.188459e-56 |
| MsG0180000373.01 | MsG0480021013.01 | 0.844724 | 6.330296e-59 | 1.031262e-55 |
| MsG0180002211.01 | MsG0480021013.01 | 0.832296 | 1.024846e-55 | 1.140543e-52 |
| MsG0180002421.01 | MsG0480021013.01 | 0.891310 | 4.466062e-74 | 3.895599e-70 |
| MsG0180003427.01 | MsG0480021013.01 | 0.873591 | 1.306229e-67 | 5.699720e-64 |
| MsG0180003485.01 | MsG0480021013.01 | 0.854409 | 1.255114e-61 | 2.800166e-58 |
| MsG0180003796.01 | MsG0480021013.01 | 0.870538 | 1.353155e-66 | 5.283054e-63 |
| MsG0180003858.01 | MsG0480021013.01 | 0.812920 | 3.325402e-51 | 2.141280e-48 |
| MsG0180003994.01 | MsG0480021013.01 | 0.801707 | 7.928321e-49 | 3.812071e-46 |
| MsG0180004126.01 | MsG0480021013.01 | 0.808445 | 3.085787e-50 | 1.764804e-47 |
| MsG0180004375.01 | MsG0480021013.01 | 0.805865 | 1.086171e-49 | 5.809961e-47 |
| MsG0180004958.01 | MsG0480021013.01 | 0.800904 | 1.157671e-48 | 5.454917e-46 |
| MsG0180005002.01 | MsG0480021013.01 | 0.819933 | 8.952871e-53 | 6.985602e-50 |
| MsG0180005435.01 | MsG0480021013.01 | 0.829365 | 5.362745e-55 | 5.477425e-52 |
| MsG0180005835.01 | MsG0480021013.01 | 0.858342 | 8.801068e-63 | 2.238848e-59 |
| MsG0180005921.01 | MsG0480021013.01 | 0.802854 | 4.603197e-49 | 2.278944e-46 |
| MsG0180006000.01 | MsG0480021013.01 | 0.863735 | 2.012814e-64 | 6.167257e-61 |
| MsG0180006260.01 | MsG0480021013.01 | 0.816400 | 5.638856e-52 | 3.991497e-49 |
| MsG0280006311.01 | MsG0480021013.01 | 0.849894 | 2.412080e-60 | 4.641284e-57 |
| MsG0280010650.01 | MsG0480021013.01 | 0.800241 | 1.580333e-48 | 7.321752e-46 |
| MsG0280010779.01 | MsG0480021013.01 | 0.870526 | 1.365427e-66 | 5.328335e-63 |
| MsG0280010795.01 | MsG0480021013.01 | 0.824034 | 1.004400e-53 | 8.794425e-51 |
| MsG0280010977.01 | MsG0480021013.01 | 0.851176 | 1.052367e-60 | 2.112039e-57 |
| MsG0280011034.01 | MsG0480021013.01 | 0.801901 | 7.236068e-49 | 3.496483e-46 |
| MsG0280011154.01 | MsG0480021013.01 | 0.839591 | 1.445853e-57 | 2.006043e-54 |
| MsG0280011282.01 | MsG0480021013.01 | 0.825011 | 5.915539e-54 | 5.327179e-51 |
| MsG0380012325.01 | MsG0480021013.01 | 0.816965 | 4.213539e-52 | 3.029279e-49 |
| MsG0380012788.01 | MsG0480021013.01 | 0.837071 | 6.451067e-57 | 8.285778e-54 |
| MsG0380012808.01 | MsG0480021013.01 | 0.825168 | 5.429375e-54 | 4.911287e-51 |
| MsG0380014130.01 | MsG0480021013.01 | 0.811135 | 8.143706e-51 | 5.000962e-48 |
| MsG0380014132.01 | MsG0480021013.01 | 0.831210 | 1.899247e-55 | 2.047053e-52 |
| MsG0380014594.01 | MsG0480021013.01 | 0.833444 | 5.314774e-56 | 6.121956e-53 |
| MsG0380014754.01 | MsG0480021013.01 | 0.804922 | 1.711443e-49 | 8.936001e-47 |
| MsG0380014808.01 | MsG0480021013.01 | 0.832888 | 7.308807e-56 | 8.279654e-53 |
| MsG0480018517.01 | MsG0480021013.01 | 0.811253 | 7.678444e-51 | 4.729892e-48 |
| MsG0480018526.01 | MsG0480021013.01 | 0.822502 | 2.289475e-53 | 1.919816e-50 |
| MsG0480018785.01 | MsG0480021013.01 | 0.805180 | 1.511704e-49 | 7.944909e-47 |
| MsG0480018845.01 | MsG0480021013.01 | 0.831832 | 1.334753e-55 | 1.465629e-52 |
| MsG0480018885.01 | MsG0480021013.01 | 0.808410 | 3.140106e-50 | 1.794128e-47 |
| MsG0480018918.01 | MsG0480021013.01 | 0.842444 | 2.575815e-58 | 3.906739e-55 |
| MsG0480018919.01 | MsG0480021013.01 | 0.817434 | 3.305275e-52 | 2.406864e-49 |
| MsG0480019635.01 | MsG0480021013.01 | 0.887515 | 1.333628e-72 | 9.948614e-69 |
| MsG0480019699.01 | MsG0480021013.01 | 0.894761 | 1.819313e-75 | 1.834200e-71 |
| MsG0480019922.01 | MsG0480021013.01 | 0.812023 | 5.223232e-51 | 3.283857e-48 |
| MsG0480020699.01 | MsG0480021013.01 | 0.801921 | 7.166458e-49 | 3.464521e-46 |
| MsG0480020847.01 | MsG0480021013.01 | 0.827913 | 1.203058e-54 | 1.177616e-51 |
| MsG0480020965.01 | MsG0480021013.01 | 0.954246 | 4.549288e-112 | 1.263887e-106 |
| MsG0480021013.01 | MsG0480021156.01 | 0.840728 | 7.302369e-58 | 1.049599e-54 |
| MsG0480021013.01 | MsG0480021203.01 | 0.825554 | 4.399720e-54 | 4.023464e-51 |
| MsG0480021013.01 | MsG0480021450.01 | 0.809075 | 2.263134e-50 | 1.315968e-47 |
| MsG0480021013.01 | MsG0480022313.01 | 0.838852 | 2.247631e-57 | 3.048711e-54 |
| MsG0480021013.01 | MsG0480022325.01 | 0.831542 | 1.573332e-55 | 1.712781e-52 |
| MsG0480021013.01 | MsG0480022331.01 | 0.896957 | 2.237978e-76 | 2.474891e-72 |
| MsG0480021013.01 | MsG0480022738.01 | 0.808960 | 2.395964e-50 | 1.388848e-47 |
| MsG0480021013.01 | MsG0480022866.01 | 0.817214 | 3.702843e-52 | 2.680131e-49 |
| MsG0480021013.01 | MsG0480022873.01 | 0.846396 | 2.229664e-59 | 3.832700e-56 |
| MsG0480021013.01 | MsG0480022952.01 | 0.809322 | 2.004007e-50 | 1.172986e-47 |
| MsG0480021013.01 | MsG0480022982.01 | 0.800230 | 1.589019e-48 | 7.359786e-46 |
| MsG0480021013.01 | MsG0480022998.01 | 0.827230 | 1.754941e-54 | 1.683949e-51 |
| MsG0480021013.01 | MsG0480023194.01 | 0.835410 | 1.706032e-56 | 2.084489e-53 |
| MsG0480021013.01 | MsG0480023262.01 | 0.848009 | 8.054760e-60 | 1.457719e-56 |
| MsG0480021013.01 | MsG0480023296.01 | 0.872633 | 2.736704e-67 | 1.153490e-63 |
| MsG0480021013.01 | MsG0480023458.01 | 0.820724 | 5.897897e-53 | 4.703641e-50 |
| MsG0480021013.01 | MsG0480023620.01 | 0.860468 | 2.022249e-63 | 5.533763e-60 |
| MsG0480021013.01 | MsG0480023647.01 | 0.814775 | 1.297325e-51 | 8.784195e-49 |
| MsG0480021013.01 | MsG0480023671.01 | 0.813432 | 2.567842e-51 | 1.676654e-48 |
| MsG0480021013.01 | MsG0480023672.01 | 0.856325 | 3.472908e-62 | 8.257478e-59 |
| MsG0480021013.01 | MsG0480023762.01 | 0.819946 | 8.891058e-53 | 6.939697e-50 |
| MsG0480021013.01 | MsG0580024109.01 | 0.815630 | 8.378021e-52 | 5.807165e-49 |
| MsG0480021013.01 | MsG0580024330.01 | 0.802949 | 4.400321e-49 | 2.183693e-46 |
| MsG0480021013.01 | MsG0580024489.01 | 0.870231 | 1.706131e-66 | 6.587841e-63 |
| MsG0480021013.01 | MsG0580024722.01 | 0.876584 | 1.242830e-68 | 6.057440e-65 |
| MsG0480021013.01 | MsG0580024758.01 | 0.839400 | 1.620557e-57 | 2.235523e-54 |
| MsG0480021013.01 | MsG0580024813.01 | 0.841763 | 3.901703e-58 | 5.791161e-55 |
| MsG0480021013.01 | MsG0580024954.01 | 0.807266 | 5.496258e-50 | 3.047757e-47 |
| MsG0480021013.01 | MsG0580025093.01 | 0.804765 | 1.845719e-49 | 9.597723e-47 |
| MsG0480021013.01 | MsG0580025515.01 | 0.869561 | 2.824383e-66 | 1.064636e-62 |
| MsG0480021013.01 | MsG0580025614.01 | 0.840486 | 8.449479e-58 | 1.205347e-54 |
| MsG0480021013.01 | MsG0580025645.01 | 0.814052 | 1.874384e-51 | 1.244586e-48 |
| MsG0480021013.01 | MsG0580025766.01 | 0.827878 | 1.226394e-54 | 1.199240e-51 |
| MsG0480021013.01 | MsG0580025775.01 | 0.808133 | 3.598022e-50 | 2.040785e-47 |
| MsG0480021013.01 | MsG0580026089.01 | 0.816716 | 4.791889e-52 | 3.421345e-49 |
| MsG0480021013.01 | MsG0580026142.01 | 0.810194 | 1.301120e-50 | 7.792441e-48 |
| MsG0480021013.01 | MsG0580026186.01 | 0.839304 | 1.716880e-57 | 2.361226e-54 |
| MsG0480021013.01 | MsG0580028060.01 | 0.800065 | 1.716659e-48 | 7.917894e-46 |
| MsG0480021013.01 | MsG0580028756.01 | 0.853906 | 1.753160e-61 | 3.847482e-58 |
| MsG0480021013.01 | MsG0580028923.01 | 0.815898 | 7.301396e-52 | 5.097510e-49 |
| MsG0480021013.01 | MsG0580029261.01 | 0.802474 | 5.514449e-49 | 2.703717e-46 |
| MsG0480021013.01 | MsG0580029298.01 | 0.865416 | 5.998613e-65 | 1.950003e-61 |
| MsG0480021013.01 | MsG0580029712.01 | 0.800914 | 1.152329e-48 | 5.431055e-46 |
| MsG0480021013.01 | MsG0680030763.01 | 0.801972 | 6.995238e-49 | 3.386012e-46 |
| MsG0480021013.01 | MsG0680030949.01 | 0.809500 | 1.835084e-50 | 1.079205e-47 |
| MsG0480021013.01 | MsG0680031384.01 | 0.823704 | 1.200450e-53 | 1.041595e-50 |
| MsG0480021013.01 | MsG0680031386.01 | 0.830114 | 3.523889e-55 | 3.678097e-52 |
| MsG0480021013.01 | MsG0680032773.01 | 0.802970 | 4.357684e-49 | 2.163654e-46 |
| MsG0480021013.01 | MsG0680035878.01 | 0.824530 | 7.679870e-54 | 6.820762e-51 |
| MsG0480021013.01 | MsG0780036360.01 | 0.864536 | 1.133492e-64 | 3.570952e-61 |
| MsG0480021013.01 | MsG0780036752.01 | 0.843267 | 1.556013e-58 | 2.421572e-55 |
| MsG0480021013.01 | MsG0780036816.01 | 0.829445 | 5.126353e-55 | 5.247654e-52 |
| MsG0480021013.01 | MsG0780036823.01 | 0.805568 | 1.253789e-49 | 6.655225e-47 |
| MsG0480021013.01 | MsG0780038332.01 | 0.810182 | 1.308982e-50 | 7.837148e-48 |
| MsG0480021013.01 | MsG0780038402.01 | 0.800951 | 1.132704e-48 | 5.343447e-46 |
| MsG0480021013.01 | MsG0780039861.01 | 0.877212 | 7.531426e-69 | 3.756499e-65 |
| MsG0480021013.01 | MsG0780039878.01 | 0.851026 | 1.159980e-60 | 2.316571e-57 |
| MsG0480021013.01 | MsG0780040307.01 | 0.850825 | 1.321526e-60 | 2.621977e-57 |
| MsG0480021013.01 | MsG0780040512.01 | 0.805434 | 1.337365e-49 | 7.074677e-47 |
| MsG0480021013.01 | MsG0780040533.01 | 0.806278 | 8.890013e-50 | 4.805699e-47 |
| MsG0480021013.01 | MsG0780040600.01 | 0.807853 | 4.125768e-50 | 2.322867e-47 |
| MsG0480021013.01 | MsG0780040620.01 | 0.809470 | 1.862686e-50 | 1.094552e-47 |
| MsG0480021013.01 | MsG0780040828.01 | 0.869417 | 3.145804e-66 | 1.179822e-62 |
| MsG0480021013.01 | MsG0780040896.01 | 0.813469 | 2.520275e-51 | 1.647293e-48 |
| MsG0480021013.01 | MsG0780041063.01 | 0.892320 | 1.769387e-74 | 1.609159e-70 |
| MsG0480021013.01 | MsG0780041132.01 | 0.849209 | 3.744540e-60 | 7.047576e-57 |
| MsG0480021013.01 | MsG0780041143.01 | 0.844392 | 7.780346e-59 | 1.254164e-55 |
| MsG0480021013.01 | MsG0780041340.01 | 0.825936 | 3.570810e-54 | 3.301488e-51 |
| MsG0480021013.01 | MsG0780041735.01 | 0.834476 | 2.932212e-56 | 3.483847e-53 |
| MsG0480021013.01 | MsG0780041756.01 | 0.821409 | 4.099224e-53 | 3.332259e-50 |
| MsG0480021013.01 | MsG0880042773.01 | 0.829627 | 4.631471e-55 | 4.766369e-52 |
| MsG0480021013.01 | MsG0880042791.01 | 0.841061 | 5.969031e-58 | 8.667436e-55 |
| MsG0480021013.01 | MsG0880042813.01 | 0.845946 | 2.957600e-59 | 5.010561e-56 |
| MsG0480021013.01 | MsG0880042836.01 | 0.819535 | 1.103886e-52 | 8.517999e-50 |
| MsG0480021013.01 | MsG0880042845.01 | 0.855614 | 5.604079e-62 | 1.301368e-58 |
| MsG0480021013.01 | MsG0880042906.01 | 0.807866 | 4.100405e-50 | 2.309369e-47 |
| MsG0480021013.01 | MsG0880042929.01 | 0.818304 | 2.101796e-52 | 1.567453e-49 |
| MsG0480021013.01 | MsG0880042961.01 | 0.809356 | 1.970032e-50 | 1.154216e-47 |
| MsG0480021013.01 | MsG0880043516.01 | 0.848710 | 5.153403e-60 | 9.541775e-57 |
| MsG0480021013.01 | MsG0880043614.01 | 0.821516 | 3.873859e-53 | 3.158321e-50 |
| MsG0480021013.01 | MsG0880043637.01 | 0.853781 | 1.904785e-61 | 4.162623e-58 |
| MsG0480021013.01 | MsG0880044835.01 | 0.811835 | 5.738707e-51 | 3.589675e-48 |
| MsG0480021013.01 | MsG0880045890.01 | 0.803549 | 3.305437e-49 | 1.665904e-46 |
| MsG0480021013.01 | MsG0880046208.01 | 0.826480 | 2.650582e-54 | 2.488652e-51 |
| MsG0480021013.01 | MsG0880046618.01 | 0.815286 | 9.994522e-52 | 6.862115e-49 |
| MsG0480021013.01 | MsG0880046646.01 | 0.818407 | 1.992270e-52 | 1.490133e-49 |
| MsG0480021013.01 | MsG0880046885.01 | 0.834437 | 2.999018e-56 | 3.559011e-53 |
| MsG0480021013.01 | MsG0880047223.01 | 0.860259 | 2.340291e-63 | 6.357746e-60 |
| MsG0480021013.01 | MsG0880047226.01 | 0.863367 | 2.619539e-64 | 7.921704e-61 |
| MsG0480021013.01 | MsG0880047431.01 | 0.823135 | 1.630148e-53 | 1.391753e-50 |
| MsG0480021013.01 | MsG0880047466.01 | 0.813161 | 2.945060e-51 | 1.908631e-48 |
| MsG0480021013.01 | MsG0880047596.01 | 0.814376 | 1.590052e-51 | 1.065131e-48 |
| MsG0480021013.01 | MsG0880047666.01 | 0.835611 | 1.517573e-56 | 1.865323e-53 |
| MsG0380015161.01 | MsG0480021013.01 | 0.863943 | 1.734555e-64 | 5.352060e-61 |
| MsG0380015548.01 | MsG0480021013.01 | 0.895911 | 6.109779e-76 | 6.460618e-72 |
| MsG0380015816.01 | MsG0480021013.01 | 0.828929 | 6.841788e-55 | 6.897811e-52 |
| MsG0380016140.01 | MsG0480021013.01 | 0.867471 | 1.335684e-65 | 4.668847e-62 |
| MsG0380016412.01 | MsG0480021013.01 | 0.804694 | 1.910000e-49 | 9.913477e-47 |
| MsG0380016703.01 | MsG0480021013.01 | 0.883491 | 4.288996e-71 | 2.724924e-67 |
| MsG0380016893.01 | MsG0480021013.01 | 0.802378 | 5.770730e-49 | 2.822657e-46 |
| MsG0380016994.01 | MsG0480021013.01 | 0.824044 | 9.991309e-54 | 8.750558e-51 |
| MsG0380017159.01 | MsG0480021013.01 | 0.859722 | 3.398839e-63 | 9.064008e-60 |
| MsG0380017164.01 | MsG0480021013.01 | 0.872957 | 2.133162e-67 | 9.095644e-64 |
| MsG0380017239.01 | MsG0480021013.01 | 0.863552 | 2.295206e-64 | 6.985313e-61 |
| MsG0380017361.01 | MsG0480021013.01 | 0.833355 | 5.593843e-56 | 6.426282e-53 |
| MsG0380017819.01 | MsG0480021013.01 | 0.811368 | 7.248919e-51 | 4.478755e-48 |
| MsG0480018397.01 | MsG0480021013.01 | 0.864373 | 1.273669e-64 | 3.989971e-61 |
| MsG0280006477.01 | MsG0480021013.01 | 0.812804 | 3.525606e-51 | 2.263147e-48 |
| MsG0280006487.01 | MsG0480021013.01 | 0.808435 | 3.101490e-50 | 1.773283e-47 |
| MsG0280006540.01 | MsG0480021013.01 | 0.876605 | 1.222586e-68 | 5.963903e-65 |
| MsG0280006563.01 | MsG0480021013.01 | 0.832990 | 6.895333e-56 | 7.835647e-53 |
| MsG0280006762.01 | MsG0480021013.01 | 0.821655 | 3.598109e-53 | 2.945109e-50 |
| MsG0280007359.01 | MsG0480021013.01 | 0.876205 | 1.679741e-68 | 8.073284e-65 |
| MsG0280007761.01 | MsG0480021013.01 | 0.853394 | 2.460210e-61 | 5.307931e-58 |
| MsG0280008280.01 | MsG0480021013.01 | 0.827659 | 1.384564e-54 | 1.345209e-51 |
| MsG0280008371.01 | MsG0480021013.01 | 0.812178 | 4.830346e-51 | 3.049843e-48 |
| MsG0280008407.01 | MsG0480021013.01 | 0.829173 | 5.968227e-55 | 6.061368e-52 |
| MsG0280009118.01 | MsG0480021013.01 | 0.805202 | 1.496086e-49 | 7.867249e-47 |
| MsG0280009514.01 | MsG0480021013.01 | 0.807343 | 5.294206e-50 | 2.941515e-47 |
| MsG0280009752.01 | MsG0480021013.01 | 0.844089 | 9.380386e-59 | 1.497912e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021013.01 | MsG0580024441.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021013.01.T01 | MTR_4g063975 | 98.837 | 258 | 3 | 0 | 1 | 258 | 1 | 258 | 0.0 | 527 |
| MsG0480021013.01.T01 | MTR_2g097030 | 86.822 | 258 | 34 | 0 | 1 | 258 | 3 | 260 | 7.93e-174 | 479 |
| MsG0480021013.01.T01 | MTR_5g079950 | 83.065 | 248 | 42 | 0 | 11 | 258 | 12 | 259 | 3.23e-162 | 450 |
| MsG0480021013.01.T01 | MTR_7g061720 | 81.783 | 258 | 46 | 1 | 2 | 258 | 1 | 258 | 5.38e-160 | 444 |
| MsG0480021013.01.T01 | MTR_5g041700 | 66.400 | 250 | 82 | 1 | 8 | 257 | 1 | 248 | 2.97e-123 | 351 |
| MsG0480021013.01.T01 | MTR_3g094060 | 64.314 | 255 | 86 | 3 | 5 | 256 | 1 | 253 | 2.23e-122 | 349 |
| MsG0480021013.01.T01 | MTR_3g094040 | 64.173 | 254 | 86 | 3 | 5 | 256 | 3 | 253 | 3.57e-122 | 348 |
| MsG0480021013.01.T01 | MTR_4g081950 | 64.822 | 253 | 82 | 3 | 2 | 253 | 34 | 280 | 2.11e-121 | 347 |
| MsG0480021013.01.T01 | MTR_5g075320 | 63.386 | 254 | 88 | 3 | 5 | 256 | 1 | 251 | 7.23e-119 | 340 |
| MsG0480021013.01.T01 | MTR_3g435430 | 69.778 | 225 | 66 | 1 | 32 | 256 | 25 | 247 | 1.65e-118 | 339 |
| MsG0480021013.01.T01 | MTR_3g466760 | 62.891 | 256 | 93 | 1 | 1 | 256 | 7 | 260 | 2.97e-117 | 336 |
| MsG0480021013.01.T01 | MTR_3g466790 | 63.035 | 257 | 91 | 3 | 1 | 256 | 1 | 254 | 1.48e-116 | 334 |
| MsG0480021013.01.T01 | MTR_7g011060 | 63.265 | 245 | 80 | 2 | 12 | 256 | 6 | 240 | 7.97e-115 | 329 |
| MsG0480021013.01.T01 | MTR_7g111010 | 56.917 | 253 | 101 | 4 | 2 | 251 | 1 | 248 | 9.83e-106 | 306 |
| MsG0480021013.01.T01 | MTR_1g085460 | 60.744 | 242 | 87 | 4 | 16 | 254 | 18 | 254 | 2.39e-105 | 306 |
| MsG0480021013.01.T01 | MTR_6g012520 | 62.698 | 252 | 84 | 2 | 5 | 256 | 1 | 242 | 3.09e-105 | 305 |
| MsG0480021013.01.T01 | MTR_1g026020 | 57.031 | 256 | 104 | 3 | 1 | 254 | 1 | 252 | 1.11e-103 | 301 |
| MsG0480021013.01.T01 | MTR_4g124340 | 59.471 | 227 | 89 | 2 | 30 | 255 | 59 | 283 | 2.29e-103 | 302 |
| MsG0480021013.01.T01 | MTR_7g110990 | 62.332 | 223 | 80 | 3 | 32 | 251 | 12 | 233 | 3.70e-102 | 297 |
| MsG0480021013.01.T01 | MTR_8g464350 | 54.656 | 247 | 107 | 2 | 5 | 251 | 7 | 248 | 1.73e-99 | 291 |
| MsG0480021013.01.T01 | MTR_7g013150 | 55.738 | 244 | 105 | 2 | 11 | 254 | 10 | 250 | 3.81e-98 | 287 |
| MsG0480021013.01.T01 | MTR_7g013140 | 57.399 | 223 | 93 | 1 | 32 | 254 | 28 | 248 | 2.77e-94 | 278 |
| MsG0480021013.01.T01 | MTR_8g058990 | 56.757 | 222 | 94 | 1 | 32 | 253 | 30 | 249 | 1.04e-93 | 276 |
| MsG0480021013.01.T01 | MTR_7g013120 | 52.245 | 245 | 112 | 3 | 11 | 254 | 10 | 250 | 2.11e-92 | 273 |
| MsG0480021013.01.T01 | MTR_4g102450 | 50.787 | 254 | 122 | 3 | 6 | 257 | 10 | 262 | 2.19e-92 | 273 |
| MsG0480021013.01.T01 | MTR_5g011210 | 50.000 | 254 | 124 | 3 | 6 | 257 | 11 | 263 | 2.95e-91 | 270 |
| MsG0480021013.01.T01 | MTR_0040s0140 | 47.287 | 258 | 131 | 2 | 1 | 256 | 2 | 256 | 5.72e-89 | 264 |
| MsG0480021013.01.T01 | MTR_5g076950 | 55.310 | 226 | 100 | 1 | 31 | 256 | 40 | 264 | 5.13e-88 | 262 |
| MsG0480021013.01.T01 | MTR_2g090255 | 46.341 | 246 | 131 | 1 | 12 | 256 | 7 | 252 | 3.36e-83 | 249 |
| MsG0480021013.01.T01 | MTR_3g064510 | 52.766 | 235 | 102 | 5 | 31 | 257 | 52 | 285 | 2.51e-80 | 243 |
| MsG0480021013.01.T01 | MTR_0008s0120 | 59.091 | 110 | 45 | 0 | 144 | 253 | 86 | 195 | 3.32e-42 | 143 |
| MsG0480021013.01.T01 | MTR_0008s0120 | 56.471 | 85 | 33 | 2 | 5 | 88 | 7 | 88 | 2.72e-24 | 96.7 |
| MsG0480021013.01.T01 | MTR_6g012500 | 42.857 | 175 | 84 | 4 | 98 | 256 | 106 | 280 | 2.16e-40 | 141 |
| MsG0480021013.01.T01 | MTR_2g090270 | 29.218 | 243 | 146 | 8 | 24 | 254 | 27 | 255 | 1.23e-24 | 99.4 |
| MsG0480021013.01.T01 | MTR_2g090265 | 28.195 | 266 | 162 | 10 | 4 | 254 | 2 | 253 | 3.01e-23 | 95.5 |
| MsG0480021013.01.T01 | MTR_0122s0020 | 31.356 | 236 | 136 | 10 | 31 | 254 | 40 | 261 | 1.12e-22 | 94.0 |
| MsG0480021013.01.T01 | MTR_4g028640 | 29.237 | 236 | 132 | 11 | 32 | 251 | 42 | 258 | 3.70e-18 | 82.0 |
| MsG0480021013.01.T01 | MTR_0118s0070 | 28.571 | 231 | 135 | 12 | 37 | 251 | 53 | 269 | 2.09e-16 | 77.0 |
| MsG0480021013.01.T01 | MTR_0809s0010 | 28.926 | 242 | 136 | 13 | 27 | 251 | 42 | 264 | 7.55e-16 | 75.5 |
| MsG0480021013.01.T01 | MTR_0122s0020 | 33.333 | 198 | 98 | 11 | 21 | 198 | 21 | 204 | 1.03e-14 | 71.2 |
| MsG0480021013.01.T01 | MTR_5g013440 | 25.991 | 227 | 151 | 9 | 35 | 254 | 32 | 248 | 1.09e-13 | 69.3 |
| MsG0480021013.01.T01 | MTR_4g099370 | 25.751 | 233 | 152 | 10 | 28 | 251 | 24 | 244 | 3.02e-13 | 67.8 |
| MsG0480021013.01.T01 | MTR_1g085365 | 53.571 | 56 | 26 | 0 | 201 | 256 | 4 | 59 | 4.20e-13 | 63.2 |
| MsG0480021013.01.T01 | MTR_4g075790 | 28.378 | 222 | 124 | 9 | 43 | 248 | 32 | 234 | 4.76e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021013.01.T01 | AT2G39700 | 82.490 | 257 | 45 | 0 | 2 | 258 | 1 | 257 | 6.92e-163 | 451 |
| MsG0480021013.01.T01 | AT2G28950 | 82.101 | 257 | 46 | 0 | 2 | 258 | 1 | 257 | 4.50e-155 | 432 |
| MsG0480021013.01.T01 | AT3G55500 | 77.953 | 254 | 56 | 0 | 5 | 258 | 7 | 260 | 5.18e-153 | 427 |
| MsG0480021013.01.T01 | AT2G37640 | 79.051 | 253 | 53 | 0 | 6 | 258 | 10 | 262 | 5.94e-153 | 427 |
| MsG0480021013.01.T01 | AT5G02260 | 74.806 | 258 | 65 | 0 | 1 | 258 | 1 | 258 | 1.12e-152 | 426 |
| MsG0480021013.01.T01 | AT2G37640 | 81.905 | 210 | 38 | 0 | 49 | 258 | 28 | 237 | 2.60e-131 | 371 |
| MsG0480021013.01.T01 | AT1G69530 | 66.403 | 253 | 82 | 2 | 5 | 257 | 1 | 250 | 1.73e-123 | 352 |
| MsG0480021013.01.T01 | AT1G69530 | 66.403 | 253 | 82 | 2 | 5 | 257 | 1 | 250 | 1.73e-123 | 352 |
| MsG0480021013.01.T01 | AT1G69530 | 66.008 | 253 | 83 | 2 | 5 | 257 | 1 | 250 | 5.78e-122 | 348 |
| MsG0480021013.01.T01 | AT5G56320 | 65.234 | 256 | 82 | 3 | 5 | 257 | 1 | 252 | 2.55e-121 | 346 |
| MsG0480021013.01.T01 | AT5G56320 | 65.234 | 256 | 82 | 3 | 5 | 257 | 1 | 252 | 2.55e-121 | 346 |
| MsG0480021013.01.T01 | AT2G03090 | 66.532 | 248 | 80 | 2 | 11 | 257 | 8 | 253 | 9.75e-121 | 345 |
| MsG0480021013.01.T01 | AT5G56320 | 65.234 | 256 | 82 | 3 | 5 | 257 | 1 | 252 | 1.13e-120 | 347 |
| MsG0480021013.01.T01 | AT1G26770 | 66.798 | 253 | 80 | 2 | 5 | 257 | 1 | 249 | 6.66e-118 | 337 |
| MsG0480021013.01.T01 | AT1G26770 | 66.535 | 254 | 81 | 2 | 4 | 257 | 10 | 259 | 8.35e-118 | 337 |
| MsG0480021013.01.T01 | AT5G05290 | 62.500 | 256 | 92 | 3 | 2 | 256 | 3 | 255 | 8.04e-116 | 332 |
| MsG0480021013.01.T01 | AT2G40610 | 62.698 | 252 | 88 | 3 | 6 | 256 | 7 | 253 | 1.25e-114 | 329 |
| MsG0480021013.01.T01 | AT3G29030 | 65.929 | 226 | 68 | 2 | 32 | 257 | 38 | 254 | 3.62e-110 | 318 |
| MsG0480021013.01.T01 | AT1G69530 | 61.265 | 253 | 65 | 3 | 5 | 257 | 1 | 220 | 8.03e-108 | 311 |
| MsG0480021013.01.T01 | AT4G01630 | 61.475 | 244 | 86 | 5 | 11 | 251 | 11 | 249 | 1.21e-106 | 309 |
| MsG0480021013.01.T01 | AT1G69530 | 60.870 | 253 | 66 | 3 | 5 | 257 | 1 | 220 | 2.35e-106 | 308 |
| MsG0480021013.01.T01 | AT1G20190 | 61.086 | 221 | 83 | 2 | 34 | 252 | 28 | 247 | 3.22e-96 | 283 |
| MsG0480021013.01.T01 | AT5G39290 | 50.000 | 278 | 111 | 5 | 1 | 254 | 3 | 276 | 6.23e-96 | 283 |
| MsG0480021013.01.T01 | AT5G39270 | 50.000 | 278 | 111 | 4 | 1 | 254 | 3 | 276 | 1.94e-95 | 281 |
| MsG0480021013.01.T01 | AT1G62980 | 53.200 | 250 | 115 | 2 | 6 | 254 | 5 | 253 | 2.32e-93 | 275 |
| MsG0480021013.01.T01 | AT5G39280 | 55.157 | 223 | 96 | 2 | 32 | 254 | 54 | 272 | 7.80e-90 | 267 |
| MsG0480021013.01.T01 | AT1G12560 | 51.807 | 249 | 116 | 4 | 11 | 257 | 16 | 262 | 2.27e-89 | 266 |
| MsG0480021013.01.T01 | AT5G39300 | 47.636 | 275 | 119 | 5 | 1 | 254 | 3 | 273 | 3.96e-89 | 265 |
| MsG0480021013.01.T01 | AT5G39310 | 54.464 | 224 | 97 | 3 | 32 | 254 | 90 | 309 | 2.70e-86 | 259 |
| MsG0480021013.01.T01 | AT3G03220 | 53.509 | 228 | 105 | 1 | 31 | 258 | 39 | 265 | 3.28e-86 | 258 |
| MsG0480021013.01.T01 | AT4G38210 | 45.565 | 248 | 133 | 1 | 12 | 257 | 8 | 255 | 7.03e-81 | 244 |
| MsG0480021013.01.T01 | AT5G39260 | 47.191 | 267 | 120 | 6 | 1 | 255 | 3 | 260 | 1.66e-76 | 233 |
| MsG0480021013.01.T01 | AT3G15370 | 46.512 | 258 | 123 | 7 | 1 | 254 | 1 | 247 | 7.86e-76 | 231 |
| MsG0480021013.01.T01 | AT1G20190 | 57.447 | 188 | 77 | 2 | 67 | 252 | 2 | 188 | 5.36e-75 | 226 |
| MsG0480021013.01.T01 | AT3G15370 | 41.667 | 288 | 123 | 8 | 1 | 254 | 1 | 277 | 3.65e-69 | 215 |
| MsG0480021013.01.T01 | AT4G28250 | 30.705 | 241 | 138 | 11 | 28 | 254 | 32 | 257 | 1.04e-23 | 97.1 |
| MsG0480021013.01.T01 | AT2G20750 | 28.692 | 237 | 145 | 8 | 31 | 254 | 39 | 264 | 8.14e-22 | 92.0 |
| MsG0480021013.01.T01 | AT1G65680 | 30.126 | 239 | 138 | 11 | 28 | 251 | 43 | 267 | 4.57e-20 | 87.0 |
| MsG0480021013.01.T01 | AT4G28250 | 29.583 | 240 | 136 | 11 | 28 | 254 | 32 | 251 | 6.10e-20 | 86.7 |
| MsG0480021013.01.T01 | AT2G20750 | 32.386 | 176 | 97 | 7 | 31 | 195 | 39 | 203 | 4.18e-16 | 75.5 |
| MsG0480021013.01.T01 | AT4G28250 | 32.240 | 183 | 95 | 8 | 28 | 200 | 32 | 195 | 1.04e-15 | 73.9 |
| MsG0480021013.01.T01 | AT4G28250 | 32.584 | 178 | 91 | 8 | 28 | 195 | 32 | 190 | 7.32e-15 | 71.6 |
| MsG0480021013.01.T01 | AT3G60570 | 23.774 | 265 | 172 | 9 | 9 | 258 | 10 | 259 | 3.22e-13 | 68.2 |
| MsG0480021013.01.T01 | AT4G17030 | 25.000 | 212 | 138 | 7 | 3 | 209 | 4 | 199 | 5.38e-13 | 67.4 |
| MsG0480021013.01.T01 | AT3G45970 | 25.000 | 212 | 137 | 9 | 51 | 251 | 15 | 215 | 6.22e-12 | 63.9 |
Find 95 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCAATGTAGAGCATTT+TGG | 0.215132 | 4:+52099369 | None:intergenic |
| TCACTTGCTTGAGCAAAATT+AGG | 0.238221 | 4:+52098782 | None:intergenic |
| GCTCCTCCTAGTTGGCAATT+TGG | 0.267981 | 4:-52096772 | MsG0480021013.01.T01:CDS |
| GACAAAGAGTGGTGTCATTC+TGG | 0.278401 | 4:-52098845 | MsG0480021013.01.T01:CDS |
| GATGCTCATGCTACTTTCTA+TGG | 0.312345 | 4:-52099277 | MsG0480021013.01.T01:CDS |
| TATGGTGGATCTGATGCTTC+TGG | 0.339901 | 4:-52099259 | MsG0480021013.01.T01:CDS |
| GCCAGTTCTGACCCCAGTTT+CGG | 0.341334 | 4:+52096878 | None:intergenic |
| TGATTTGTCTTGGTTATTGA+TGG | 0.348494 | 4:-52096548 | MsG0480021013.01.T01:three_prime_UTR |
| GGATGCCACTGAGCCGAAAC+TGG | 0.348922 | 4:-52096891 | MsG0480021013.01.T01:CDS |
| TTTGCTCAAGCAAGTGATAA+TGG | 0.368817 | 4:-52098776 | MsG0480021013.01.T01:CDS |
| ATTGTTGAAGCTAGAATTCC+TGG | 0.372131 | 4:-52099325 | MsG0480021013.01.T01:CDS |
| AACCTACCCTAGAGATTGAT+TGG | 0.386084 | 4:+52099456 | None:intergenic |
| CAATTTGGTCAAACTTTCAC+TGG | 0.389947 | 4:-52096757 | MsG0480021013.01.T01:CDS |
| CAGTGGCATCCACTCGGTTC+GGG | 0.402414 | 4:+52096903 | None:intergenic |
| GCTAACCTGCGATAAGCAAC+AGG | 0.415595 | 4:+52098668 | None:intergenic |
| TCAGTGGCATCCACTCGGTT+CGG | 0.423453 | 4:+52096902 | None:intergenic |
| ATTGGGAGGTGAGAGTTGAT+TGG | 0.432169 | 4:+52099474 | None:intergenic |
| CTTTGATTAAGTGTTTGTAT+TGG | 0.437285 | 4:-52096328 | MsG0480021013.01.T01:three_prime_UTR |
| GACTAGGTGTTGATTTGTCT+TGG | 0.439194 | 4:-52096558 | MsG0480021013.01.T01:three_prime_UTR |
| TGTCTTGGTTATTGATGGTA+GGG | 0.442385 | 4:-52096543 | MsG0480021013.01.T01:three_prime_UTR |
| GCCGAAACTGGGGTCAGAAC+TGG | 0.448238 | 4:-52096879 | MsG0480021013.01.T01:CDS |
| ACCGTAGATCTTCAACATCT+TGG | 0.453721 | 4:-52096801 | MsG0480021013.01.T01:CDS |
| CGGATTCCGTTACTTTAACC+TGG | 0.456362 | 4:-52096983 | MsG0480021013.01.T01:CDS |
| GTTTGACCAAATTGCCAACT+AGG | 0.460335 | 4:+52096766 | None:intergenic |
| TCACCTCCCAATCAATCTCT+AGG | 0.479472 | 4:-52099463 | MsG0480021013.01.T01:five_prime_UTR |
| TATATAAACTAATGTAATGA+AGG | 0.481527 | 4:-52096502 | MsG0480021013.01.T01:three_prime_UTR |
| TTGATTGGGCAGTGAGAGTG+TGG | 0.485587 | 4:+52099489 | None:intergenic |
| TTGTCTTGGTTATTGATGGT+AGG | 0.485720 | 4:-52096544 | MsG0480021013.01.T01:three_prime_UTR |
| AGAATTCCTGGTGTTTACTC+TGG | 0.487043 | 4:-52099313 | MsG0480021013.01.T01:CDS |
| TTGGGAGGTGAGAGTTGATT+GGG | 0.487228 | 4:+52099475 | None:intergenic |
| GGAACATTGCTCCTCCTAGT+TGG | 0.491170 | 4:-52096780 | MsG0480021013.01.T01:CDS |
| GCTGAAAGTGGCTAAACAAA+TGG | 0.493988 | 4:-52096427 | MsG0480021013.01.T01:three_prime_UTR |
| GTAGCAGTAATGAAAATTGA+AGG | 0.495390 | 4:+52098818 | None:intergenic |
| GCAGTGAGAGTGTGGAAGAG+TGG | 0.503109 | 4:+52099497 | None:intergenic |
| TCTGATGCTTCTGGCACCAT+GGG | 0.503667 | 4:-52099250 | MsG0480021013.01.T01:intron |
| AATTTGTATGCTACTAGAGA+AGG | 0.508073 | 4:-52096469 | MsG0480021013.01.T01:three_prime_UTR |
| TTAGGAGGAGCATGTGGGTA+CGG | 0.517583 | 4:-52098974 | MsG0480021013.01.T01:intron |
| GTGTTTACTCTGGTGGTCAA+TGG | 0.519210 | 4:-52099303 | MsG0480021013.01.T01:CDS |
| ATTCCTGGTGTTTACTCTGG+TGG | 0.519949 | 4:-52099310 | MsG0480021013.01.T01:CDS |
| TTGTCCCTGTTGCTTATCGC+AGG | 0.520176 | 4:-52098673 | MsG0480021013.01.T01:intron |
| CAGTGAGAGTGTGGAAGAGT+GGG | 0.521122 | 4:+52099498 | None:intergenic |
| TAATCAAAGTGATAAGCAAA+TGG | 0.521796 | 4:+52096342 | None:intergenic |
| TCAGCAATCTTAAGAAACAT+AGG | 0.524078 | 4:+52098710 | None:intergenic |
| AATTTGTACAGTCAAGGTTA+CGG | 0.526954 | 4:-52098950 | MsG0480021013.01.T01:CDS |
| ATTAGCAACGTAGCAGGTGC+TGG | 0.528629 | 4:-52096955 | MsG0480021013.01.T01:CDS |
| ATCTGATGCTTCTGGCACCA+TGG | 0.529188 | 4:-52099251 | MsG0480021013.01.T01:CDS |
| GTGCTAATTAGCAACGTAGC+AGG | 0.532373 | 4:-52096961 | MsG0480021013.01.T01:CDS |
| CTACGTTGCTAATTAGCACC+AGG | 0.535801 | 4:+52096965 | None:intergenic |
| ACCTACCCTAGAGATTGATT+GGG | 0.539903 | 4:+52099457 | None:intergenic |
| AAAGTAACGGAATCCGTTCA+CGG | 0.539938 | 4:+52096990 | None:intergenic |
| TTGGTGAGAATGAGATGGAT+GGG | 0.542387 | 4:-52096609 | MsG0480021013.01.T01:three_prime_UTR |
| GATGCCACTGAGCCGAAACT+GGG | 0.544292 | 4:-52096890 | MsG0480021013.01.T01:CDS |
| TGGTGAGAATGAGATGGATG+GGG | 0.545644 | 4:-52096608 | MsG0480021013.01.T01:three_prime_UTR |
| AGAGAAGGAAAGCGAAAGGT+AGG | 0.545681 | 4:-52096454 | MsG0480021013.01.T01:three_prime_UTR |
| GGAATAAGATTCACCGTGAA+CGG | 0.547347 | 4:-52097003 | MsG0480021013.01.T01:CDS |
| TCCAAGATGTTGAAGATCTA+CGG | 0.552587 | 4:+52096800 | None:intergenic |
| ATCGTGCGCGCCTACGTGAA+AGG | 0.554876 | 4:-52096928 | MsG0480021013.01.T01:CDS |
| TACGGAAATTTGTACAGTCA+AGG | 0.556701 | 4:-52098956 | MsG0480021013.01.T01:CDS |
| ATTCCACCACGCTTTCTGCA+TGG | 0.558295 | 4:+52097021 | None:intergenic |
| AAAACTAGAAATAGCTATGG+TGG | 0.560259 | 4:-52099392 | MsG0480021013.01.T01:exon |
| AAACACGAAAGGACAAAGCC+TGG | 0.564825 | 4:+52096833 | None:intergenic |
| CTAGTAGCATACAAATTCAA+AGG | 0.565473 | 4:+52096475 | None:intergenic |
| AAGATTGCTGAGTATCGTGC+TGG | 0.570660 | 4:-52098698 | MsG0480021013.01.T01:CDS |
| AGCACTGCTTTGTTCAACAA+TGG | 0.578791 | 4:-52098908 | MsG0480021013.01.T01:CDS |
| GGTTCGGGTTCCTTTCACGT+AGG | 0.581009 | 4:+52096918 | None:intergenic |
| CACCTCCCAATCAATCTCTA+GGG | 0.584744 | 4:-52099462 | MsG0480021013.01.T01:five_prime_UTR |
| TCGGCTCAGTGGCATCCACT+CGG | 0.585195 | 4:+52096897 | None:intergenic |
| TTTGGTGAGAATGAGATGGA+TGG | 0.590739 | 4:-52096610 | MsG0480021013.01.T01:three_prime_UTR |
| CTTGCTTGAGCAAAATTAGG+AGG | 0.594414 | 4:+52098785 | None:intergenic |
| TACCCTAGAGATTGATTGGG+AGG | 0.598826 | 4:+52099460 | None:intergenic |
| TTCAACAATGGTTTAAGCTG+TGG | 0.599006 | 4:-52098896 | MsG0480021013.01.T01:CDS |
| AAGGTAGGAAATGCTGAAAG+TGG | 0.601780 | 4:-52096439 | MsG0480021013.01.T01:three_prime_UTR |
| TACTAGAGAAGGAAAGCGAA+AGG | 0.602464 | 4:-52096458 | MsG0480021013.01.T01:three_prime_UTR |
| TTAGCACCAGGTTAAAGTAA+CGG | 0.608652 | 4:+52096977 | None:intergenic |
| GGCATAGCAAGATCAAAATG+AGG | 0.611060 | 4:+52098731 | None:intergenic |
| TGACCACCAGAGTAAACACC+AGG | 0.616969 | 4:+52099307 | None:intergenic |
| GCTCATGCTACTTTCTATGG+TGG | 0.618802 | 4:-52099274 | MsG0480021013.01.T01:CDS |
| TGACCCCAGTTTCGGCTCAG+TGG | 0.625730 | 4:+52096886 | None:intergenic |
| CTGGCCCACTAAAACCGCGT+TGG | 0.630033 | 4:+52096852 | None:intergenic |
| GCAAGATCAAAATGAGGACG+AGG | 0.630560 | 4:+52098737 | None:intergenic |
| TGACCAAATTGCCAACTAGG+AGG | 0.638092 | 4:+52096769 | None:intergenic |
| GTCGCTGCTTGAAACACGAA+AGG | 0.638642 | 4:+52096822 | None:intergenic |
| ATGACAAGTTAATTGTGACT+AGG | 0.638803 | 4:-52096574 | MsG0480021013.01.T01:three_prime_UTR |
| AGGGTGCCATGCAGAAAGCG+TGG | 0.647035 | 4:-52097027 | MsG0480021013.01.T01:CDS |
| AGATCAAAATGAGGACGAGG+AGG | 0.649689 | 4:+52098740 | None:intergenic |
| TCCCAATCAATCTCTAGGGT+AGG | 0.651811 | 4:-52099458 | MsG0480021013.01.T01:five_prime_UTR |
| TGAAAGGAACCCGAACCGAG+TGG | 0.653524 | 4:-52096912 | MsG0480021013.01.T01:CDS |
| AAGCAAGTGATAATGGTGGT+TGG | 0.657192 | 4:-52098769 | MsG0480021013.01.T01:CDS |
| GATCAAAATGAGGACGAGGA+GGG | 0.663864 | 4:+52098741 | None:intergenic |
| GTGCCATGCAGAAAGCGTGG+TGG | 0.676430 | 4:-52097024 | MsG0480021013.01.T01:CDS |
| ATGCCACTGAGCCGAAACTG+GGG | 0.678002 | 4:-52096889 | MsG0480021013.01.T01:CDS |
| AGTGTGCAAATGACAAAGAG+TGG | 0.680419 | 4:-52098856 | MsG0480021013.01.T01:CDS |
| GCTCAAGCAAGTGATAATGG+TGG | 0.723102 | 4:-52098773 | MsG0480021013.01.T01:CDS |
| CTAACCTGCGATAAGCAACA+GGG | 0.724040 | 4:+52098669 | None:intergenic |
| TCAGAACTGGCAATCCAACG+CGG | 0.772854 | 4:-52096866 | MsG0480021013.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACTACTAAAAAAAATTA+AGG | + | Chr4:52097697-52097716 | None:intergenic | 10.0% |
| !!! | AAGTTTATTTTATTTTACTT+TGG | - | Chr4:52097249-52097268 | MsG0480021013.01.T01:intron | 10.0% |
| !!! | ATTTTATCTTTAAGTTATTT+AGG | - | Chr4:52097221-52097240 | MsG0480021013.01.T01:intron | 10.0% |
| !!! | TTAATTATCCAATTTTTATA+TGG | + | Chr4:52098581-52098600 | None:intergenic | 10.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | Chr4:52098222-52098241 | None:intergenic | 15.0% |
| !! | CTATCTATATTAAATAGAAA+TGG | + | Chr4:52098546-52098565 | None:intergenic | 15.0% |
| !! | GAAAAGAAAAAAAAAATTAG+AGG | - | Chr4:52097432-52097451 | MsG0480021013.01.T01:intron | 15.0% |
| !! | TATATAAACTAATGTAATGA+AGG | - | Chr4:52099278-52099297 | MsG0480021013.01.T01:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | Chr4:52098223-52098242 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | Chr4:52098287-52098306 | None:intergenic | 15.0% |
| !!! | ACTACATTTTTTTAATTTCT+TGG | - | Chr4:52097158-52097177 | MsG0480021013.01.T01:intron | 15.0% |
| !!! | ATATATTATTGACTTTTCTT+TGG | - | Chr4:52097752-52097771 | MsG0480021013.01.T01:intron | 15.0% |
| !!! | ATGTTTTTTTAGGTTTAATT+AGG | + | Chr4:52096744-52096763 | None:intergenic | 15.0% |
| !!! | GCTAATATATTTTTTAATGT+TGG | - | Chr4:52099091-52099110 | MsG0480021013.01.T01:intron | 15.0% |
| !!! | TAAAAATAATATAAAGTACC+AGG | - | Chr4:52097469-52097488 | MsG0480021013.01.T01:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | Chr4:52098288-52098307 | None:intergenic | 15.0% |
| !!! | TTTATGTTAATTTTTTGTGT+TGG | - | Chr4:52096778-52096797 | MsG0480021013.01.T01:CDS | 15.0% |
| !!! | TTTTCTTTTTCATTAATTGA+GGG | + | Chr4:52097725-52097744 | None:intergenic | 15.0% |
| !! | AAAAAAACTAGAAATAGCTA+TGG | - | Chr4:52096385-52096404 | MsG0480021013.01.T01:three_prime_UTR | 20.0% |
| !! | ATTTCTCTAAATTATATTCC+TGG | + | Chr4:52097490-52097509 | None:intergenic | 20.0% |
| !! | TAGCATGTGTAAAAATAAAA+AGG | - | Chr4:52098664-52098683 | MsG0480021013.01.T01:intron | 20.0% |
| !! | TATAGTTAAGAAATTAGTTG+TGG | - | Chr4:52097786-52097805 | MsG0480021013.01.T01:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | Chr4:52098286-52098305 | None:intergenic | 20.0% |
| !!! | ATATTTTTTAATGTTGGTTG+AGG | - | Chr4:52099097-52099116 | MsG0480021013.01.T01:intron | 20.0% |
| !!! | ATTTTGTTGATATTTACACA+GGG | - | Chr4:52098734-52098753 | MsG0480021013.01.T01:CDS | 20.0% |
| !!! | CTTTTCTTTTTCATTAATTG+AGG | + | Chr4:52097726-52097745 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | + | Chr4:52098153-52098172 | None:intergenic | 20.0% |
| !!! | GTAACATTTCATGTTTTTTT+AGG | + | Chr4:52096754-52096773 | None:intergenic | 20.0% |
| !!! | TATTTTGTTGATATTTACAC+AGG | - | Chr4:52098733-52098752 | MsG0480021013.01.T01:CDS | 20.0% |
| !!! | TTTTTCTTACTGTTTTTAGT+TGG | - | Chr4:52099128-52099147 | MsG0480021013.01.T01:intron | 20.0% |
| ! | AAATTGGAATCAATTATGGT+AGG | - | Chr4:52098634-52098653 | MsG0480021013.01.T01:intron | 25.0% |
| ! | AATATTTAGGTCTCTTAACA+AGG | - | Chr4:52097299-52097318 | MsG0480021013.01.T01:intron | 25.0% |
| ! | AATCACTTTGACATATAGTT+AGG | - | Chr4:52096619-52096638 | MsG0480021013.01.T01:three_prime_UTR | 25.0% |
| ! | AATTGGAATCAATTATGGTA+GGG | - | Chr4:52098635-52098654 | MsG0480021013.01.T01:intron | 25.0% |
| ! | ATCACTTTGACATATAGTTA+GGG | - | Chr4:52096620-52096639 | MsG0480021013.01.T01:three_prime_UTR | 25.0% |
| ! | ATGGAAAGAATGAAAAAGAA+AGG | + | Chr4:52098387-52098406 | None:intergenic | 25.0% |
| ! | CCAATAAAAGTGAAAAAACA+AGG | - | Chr4:52097615-52097634 | MsG0480021013.01.T01:intron | 25.0% |
| ! | CTACTCAACCATATAAAAAT+TGG | - | Chr4:52098570-52098589 | MsG0480021013.01.T01:intron | 25.0% |
| ! | CTTTGATTAAGTGTTTGTAT+TGG | - | Chr4:52099452-52099471 | MsG0480021013.01.T01:five_prime_UTR | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | Chr4:52098264-52098283 | None:intergenic | 25.0% |
| ! | GATACAAGTGGTAAATATTT+AGG | - | Chr4:52097286-52097305 | MsG0480021013.01.T01:intron | 25.0% |
| ! | GTAAAAATACAAATTAGCTG+CGG | + | Chr4:52099383-52099402 | None:intergenic | 25.0% |
| ! | GTAGAAATTGGAATCAATTA+TGG | - | Chr4:52098630-52098649 | MsG0480021013.01.T01:intron | 25.0% |
| ! | TAAAAATACAAATTAGCTGC+GGG | + | Chr4:52099382-52099401 | None:intergenic | 25.0% |
| ! | TAAAATATGAGACACTAACA+TGG | + | Chr4:52098406-52098425 | None:intergenic | 25.0% |
| ! | TAATCAAAGTGATAAGCAAA+TGG | + | Chr4:52099441-52099460 | None:intergenic | 25.0% |
| ! | TATCCACATGTTTGTATTTA+CGG | + | Chr4:52096695-52096714 | None:intergenic | 25.0% |
| !! | ACTTTTATTGGTCAAAACAA+TGG | + | Chr4:52097606-52097625 | None:intergenic | 25.0% |
| !! | AGTGTCTCATATTTTACTTT+TGG | - | Chr4:52098410-52098429 | MsG0480021013.01.T01:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | Chr4:52098176-52098195 | None:intergenic | 25.0% |
| !! | TTTCACTGGAAAGAATTTTA+GGG | - | Chr4:52099037-52099056 | MsG0480021013.01.T01:intron | 25.0% |
| !!! | CCTTGTTTTTTCACTTTTAT+TGG | + | Chr4:52097618-52097637 | None:intergenic | 25.0% |
| !!! | GTATTTTTACAGAATGATGA+TGG | - | Chr4:52099393-52099412 | MsG0480021013.01.T01:exon | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | Chr4:52098175-52098194 | None:intergenic | 25.0% |
| !!! | TGTTCTTAAGTTGATTTTAG+AGG | - | Chr4:52099487-52099506 | MsG0480021013.01.T01:five_prime_UTR | 25.0% |
| !!! | TTTTTTGTGTTGGTGTTTTT+AGG | - | Chr4:52096788-52096807 | MsG0480021013.01.T01:CDS | 25.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | Chr4:52097593-52097612 | None:intergenic | 30.0% | |
| AAAACTAGAAATAGCTATGG+TGG | - | Chr4:52096388-52096407 | MsG0480021013.01.T01:three_prime_UTR | 30.0% | |
| AATTTGTACAGTCAAGGTTA+CGG | - | Chr4:52096830-52096849 | MsG0480021013.01.T01:CDS | 30.0% | |
| AATTTGTATGCTACTAGAGA+AGG | - | Chr4:52099311-52099330 | MsG0480021013.01.T01:CDS | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | + | Chr4:52098140-52098159 | None:intergenic | 30.0% | |
| AGAAAATATGAGGGCAAAAA+GGG | + | Chr4:52096577-52096596 | None:intergenic | 30.0% | |
| AGAAATGAACGAAGTAACTA+GGG | + | Chr4:52097868-52097887 | None:intergenic | 30.0% | |
| ATGACAAGTTAATTGTGACT+AGG | - | Chr4:52099206-52099225 | MsG0480021013.01.T01:intron | 30.0% | |
| CTAGTAGCATACAAATTCAA+AGG | + | Chr4:52099308-52099327 | None:intergenic | 30.0% | |
| GACATAATCTCGATGTATTA+GGG | + | Chr4:52096665-52096684 | None:intergenic | 30.0% | |
| GTAGCAGTAATGAAAATTGA+AGG | + | Chr4:52096965-52096984 | None:intergenic | 30.0% | |
| GTTAAGAAATTAGTTGTGGT+AGG | - | Chr4:52097790-52097809 | MsG0480021013.01.T01:intron | 30.0% | |
| TCAGCAATCTTAAGAAACAT+AGG | + | Chr4:52097073-52097092 | None:intergenic | 30.0% | |
| TCTTAAGTTTGTGATACAAG+TGG | - | Chr4:52097274-52097293 | MsG0480021013.01.T01:intron | 30.0% | |
| TGACATAATCTCGATGTATT+AGG | + | Chr4:52096666-52096685 | None:intergenic | 30.0% | |
| TGTAGTAAAAGAGCAAAAGA+AGG | + | Chr4:52097144-52097163 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | Chr4:52098279-52098298 | None:intergenic | 30.0% | |
| ! | CAATTTTTGTACGAAGAACA+AGG | + | Chr4:52098062-52098081 | None:intergenic | 30.0% |
| ! | CTTTCACTGGAAAGAATTTT+AGG | - | Chr4:52099036-52099055 | MsG0480021013.01.T01:intron | 30.0% |
| ! | TGATTTGTCTTGGTTATTGA+TGG | - | Chr4:52099232-52099251 | MsG0480021013.01.T01:intron | 30.0% |
| !! | TTTTTAATGTTGGTTGAGGA+AGG | - | Chr4:52099101-52099120 | MsG0480021013.01.T01:intron | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | Chr4:52097521-52097540 | MsG0480021013.01.T01:intron | 30.0% |
| !!! | CAATTTCTACTTTTTCCGTA+CGG | + | Chr4:52098620-52098639 | None:intergenic | 30.0% |
| !!! | GTTTTTTGACTAGATGCTTT+TGG | - | Chr4:52099152-52099171 | MsG0480021013.01.T01:intron | 30.0% |
| !!! | TTTTTACAGAATGATGATGG+TGG | - | Chr4:52099396-52099415 | MsG0480021013.01.T01:exon | 30.0% |
| AAATTTAGGTACGTTGACGT+AGG | + | Chr4:52098479-52098498 | None:intergenic | 35.0% | |
| ATTGTTGAAGCTAGAATTCC+TGG | - | Chr4:52096455-52096474 | MsG0480021013.01.T01:three_prime_UTR | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | - | Chr4:52098323-52098342 | MsG0480021013.01.T01:intron | 35.0% | |
| CAATTTGGTCAAACTTTCAC+TGG | - | Chr4:52099023-52099042 | MsG0480021013.01.T01:intron | 35.0% | |
| CAGAAAATATGAGGGCAAAA+AGG | + | Chr4:52096578-52096597 | None:intergenic | 35.0% | |
| CAGAAATGAACGAAGTAACT+AGG | + | Chr4:52097869-52097888 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | - | Chr4:52098322-52098341 | MsG0480021013.01.T01:intron | 35.0% | |
| CCTCAATCCAGAAAATATGA+GGG | + | Chr4:52096586-52096605 | None:intergenic | 35.0% | |
| CGTACGGAAAAAGTAGAAAT+TGG | - | Chr4:52098618-52098637 | MsG0480021013.01.T01:intron | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | + | Chr4:52098139-52098158 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | Chr4:52097526-52097545 | None:intergenic | 35.0% | |
| GTGAAGTGATATATACCGTA+CGG | - | Chr4:52098602-52098621 | MsG0480021013.01.T01:intron | 35.0% | |
| TACGGAAATTTGTACAGTCA+AGG | - | Chr4:52096824-52096843 | MsG0480021013.01.T01:CDS | 35.0% | |
| TCACCGTAAATACAAACATG+TGG | - | Chr4:52096689-52096708 | MsG0480021013.01.T01:three_prime_UTR | 35.0% | |
| TCACTTGCTTGAGCAAAATT+AGG | + | Chr4:52097001-52097020 | None:intergenic | 35.0% | |
| TCCAAGATGTTGAAGATCTA+CGG | + | Chr4:52098983-52099002 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | Chr4:52098309-52098328 | MsG0480021013.01.T01:intron | 35.0% | |
| TTAGCACCAGGTTAAAGTAA+CGG | + | Chr4:52098806-52098825 | None:intergenic | 35.0% | |
| TTCAACAATGGTTTAAGCTG+TGG | - | Chr4:52096884-52096903 | MsG0480021013.01.T01:CDS | 35.0% | |
| TTCATTAACTGTGATGAGAC+TGG | + | Chr4:52097819-52097838 | None:intergenic | 35.0% | |
| TTTGCTCAAGCAAGTGATAA+TGG | - | Chr4:52097004-52097023 | MsG0480021013.01.T01:CDS | 35.0% | |
| ! | CCTCATATTTTCTGGATTGA+GGG | - | Chr4:52096584-52096603 | MsG0480021013.01.T01:three_prime_UTR | 35.0% |
| ! | CTTTTTGCCCTCATATTTTC+TGG | - | Chr4:52096576-52096595 | MsG0480021013.01.T01:three_prime_UTR | 35.0% |
| ! | TGTCTTGGTTATTGATGGTA+GGG | - | Chr4:52099237-52099256 | MsG0480021013.01.T01:intron | 35.0% |
| ! | TTGTCTTGGTTATTGATGGT+AGG | - | Chr4:52099236-52099255 | MsG0480021013.01.T01:intron | 35.0% |
| !! | GAAAGCAATGTAGAGCATTT+TGG | + | Chr4:52096414-52096433 | None:intergenic | 35.0% |
| !! | GGTAATTTGTTACATACCCA+TGG | + | Chr4:52096549-52096568 | None:intergenic | 35.0% |
| !! | TGATGGTGTTTTCGACTTTT+TGG | - | Chr4:52097912-52097931 | MsG0480021013.01.T01:intron | 35.0% |
| !!! | TTTGTGTTGGTGTTTTTAGG+AGG | - | Chr4:52096791-52096810 | MsG0480021013.01.T01:CDS | 35.0% |
| AACCTACCCTAGAGATTGAT+TGG | + | Chr4:52096327-52096346 | None:intergenic | 40.0% | |
| AAGGTAGGAAATGCTGAAAG+TGG | - | Chr4:52099341-52099360 | MsG0480021013.01.T01:CDS | 40.0% | |
| ACCGTAGATCTTCAACATCT+TGG | - | Chr4:52098979-52098998 | MsG0480021013.01.T01:intron | 40.0% | |
| ACCTACCCTAGAGATTGATT+GGG | + | Chr4:52096326-52096345 | None:intergenic | 40.0% | |
| AGAATTCCTGGTGTTTACTC+TGG | - | Chr4:52096467-52096486 | MsG0480021013.01.T01:three_prime_UTR | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | Chr4:52097583-52097602 | None:intergenic | 40.0% | |
| AGTGTGCAAATGACAAAGAG+TGG | - | Chr4:52096924-52096943 | MsG0480021013.01.T01:CDS | 40.0% | |
| ATGAGGGCAAAAAGGGAAAT+GGG | + | Chr4:52096570-52096589 | None:intergenic | 40.0% | |
| CCCTCAATCCAGAAAATATG+AGG | + | Chr4:52096587-52096606 | None:intergenic | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | + | Chr4:52098325-52098344 | None:intergenic | 40.0% | |
| CTTGCTTGAGCAAAATTAGG+AGG | + | Chr4:52096998-52097017 | None:intergenic | 40.0% | |
| GCTGAAAGTGGCTAAACAAA+TGG | - | Chr4:52099353-52099372 | MsG0480021013.01.T01:CDS | 40.0% | |
| GGAATAAGATTCACCGTGAA+CGG | - | Chr4:52098777-52098796 | MsG0480021013.01.T01:CDS | 40.0% | |
| GGCATAGCAAGATCAAAATG+AGG | + | Chr4:52097052-52097071 | None:intergenic | 40.0% | |
| GTGTGTCTGATTCATGAAGT+GGG | - | Chr4:52097967-52097986 | MsG0480021013.01.T01:intron | 40.0% | |
| GTTGCTCTAGTCAAATGTGA+TGG | - | Chr4:52097895-52097914 | MsG0480021013.01.T01:intron | 40.0% | |
| GTTTGACCAAATTGCCAACT+AGG | + | Chr4:52099017-52099036 | None:intergenic | 40.0% | |
| TACTAGAGAAGGAAAGCGAA+AGG | - | Chr4:52099322-52099341 | MsG0480021013.01.T01:CDS | 40.0% | |
| TATGAGGGCAAAAAGGGAAA+TGG | + | Chr4:52096571-52096590 | None:intergenic | 40.0% | |
| TGTGTCTGATTCATGAAGTG+GGG | - | Chr4:52097968-52097987 | MsG0480021013.01.T01:intron | 40.0% | |
| TGTGTGTCTGATTCATGAAG+TGG | - | Chr4:52097966-52097985 | MsG0480021013.01.T01:intron | 40.0% | |
| TTGGTGAGAATGAGATGGAT+GGG | - | Chr4:52099171-52099190 | MsG0480021013.01.T01:intron | 40.0% | |
| TTTGGTGAGAATGAGATGGA+TGG | - | Chr4:52099170-52099189 | MsG0480021013.01.T01:intron | 40.0% | |
| ! | AAAGTAACGGAATCCGTTCA+CGG | + | Chr4:52098793-52098812 | None:intergenic | 40.0% |
| ! | AGCACTGCTTTGTTCAACAA+TGG | - | Chr4:52096872-52096891 | MsG0480021013.01.T01:CDS | 40.0% |
| ! | CCCTCATATTTTCTGGATTG+AGG | - | Chr4:52096583-52096602 | MsG0480021013.01.T01:three_prime_UTR | 40.0% |
| ! | TGCTTTTGGTGAGAATGAGA+TGG | - | Chr4:52099166-52099185 | MsG0480021013.01.T01:intron | 40.0% |
| !! | AAGCAAGTGATAATGGTGGT+TGG | - | Chr4:52097011-52097030 | MsG0480021013.01.T01:CDS | 40.0% |
| !! | GACTAGGTGTTGATTTGTCT+TGG | - | Chr4:52099222-52099241 | MsG0480021013.01.T01:intron | 40.0% |
| !! | GATGCTCATGCTACTTTCTA+TGG | - | Chr4:52096503-52096522 | MsG0480021013.01.T01:three_prime_UTR | 40.0% |
| !!! | TGTTTTTAGGAGGAGCATGT+GGG | - | Chr4:52096801-52096820 | MsG0480021013.01.T01:CDS | 40.0% |
| AAACACGAAAGGACAAAGCC+TGG | + | Chr4:52098950-52098969 | None:intergenic | 45.0% | |
| AGAGAAGGAAAGCGAAAGGT+AGG | - | Chr4:52099326-52099345 | MsG0480021013.01.T01:CDS | 45.0% | |
| AGATCAAAATGAGGACGAGG+AGG | + | Chr4:52097043-52097062 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | + | Chr4:52098135-52098154 | None:intergenic | 45.0% | |
| ATTCCTGGTGTTTACTCTGG+TGG | - | Chr4:52096470-52096489 | MsG0480021013.01.T01:three_prime_UTR | 45.0% | |
| CACCTCCCAATCAATCTCTA+GGG | - | Chr4:52096318-52096337 | MsG0480021013.01.T01:three_prime_UTR | 45.0% | |
| CTAACCTGCGATAAGCAACA+GGG | + | Chr4:52097114-52097133 | None:intergenic | 45.0% | |
| CTACGTTGCTAATTAGCACC+AGG | + | Chr4:52098818-52098837 | None:intergenic | 45.0% | |
| GATCAAAATGAGGACGAGGA+GGG | + | Chr4:52097042-52097061 | None:intergenic | 45.0% | |
| GCAAGATCAAAATGAGGACG+AGG | + | Chr4:52097046-52097065 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | - | Chr4:52098327-52098346 | MsG0480021013.01.T01:intron | 45.0% | |
| GTGCTAATTAGCAACGTAGC+AGG | - | Chr4:52098819-52098838 | MsG0480021013.01.T01:CDS | 45.0% | |
| GTGTTTACTCTGGTGGTCAA+TGG | - | Chr4:52096477-52096496 | MsG0480021013.01.T01:three_prime_UTR | 45.0% | |
| TACCCTAGAGATTGATTGGG+AGG | + | Chr4:52096323-52096342 | None:intergenic | 45.0% | |
| TCACCTCCCAATCAATCTCT+AGG | - | Chr4:52096317-52096336 | MsG0480021013.01.T01:three_prime_UTR | 45.0% | |
| TGACCAAATTGCCAACTAGG+AGG | + | Chr4:52099014-52099033 | None:intergenic | 45.0% | |
| TGGTGAGAATGAGATGGATG+GGG | - | Chr4:52099172-52099191 | MsG0480021013.01.T01:intron | 45.0% | |
| ! | AAGATTGCTGAGTATCGTGC+TGG | - | Chr4:52097082-52097101 | MsG0480021013.01.T01:intron | 45.0% |
| ! | ATTGGGAGGTGAGAGTTGAT+TGG | + | Chr4:52096309-52096328 | None:intergenic | 45.0% |
| ! | CGGATTCCGTTACTTTAACC+TGG | - | Chr4:52098797-52098816 | MsG0480021013.01.T01:CDS | 45.0% |
| ! | TTGGGAGGTGAGAGTTGATT+GGG | + | Chr4:52096308-52096327 | None:intergenic | 45.0% |
| !! | AAGTGGGGTAGTGTTACTTC+GGG | - | Chr4:52097983-52098002 | MsG0480021013.01.T01:intron | 45.0% |
| !! | CAATCCAACGCGGTTTTAGT+GGG | - | Chr4:52098924-52098943 | MsG0480021013.01.T01:CDS | 45.0% |
| !! | GAAGTGGGGTAGTGTTACTT+CGG | - | Chr4:52097982-52098001 | MsG0480021013.01.T01:intron | 45.0% |
| !! | GACAAAGAGTGGTGTCATTC+TGG | - | Chr4:52096935-52096954 | MsG0480021013.01.T01:CDS | 45.0% |
| !! | GCTCAAGCAAGTGATAATGG+TGG | - | Chr4:52097007-52097026 | MsG0480021013.01.T01:CDS | 45.0% |
| !! | GCTCATGCTACTTTCTATGG+TGG | - | Chr4:52096506-52096525 | MsG0480021013.01.T01:three_prime_UTR | 45.0% |
| !! | GGTAGTGTTACTTCGGGTAA+AGG | - | Chr4:52097989-52098008 | MsG0480021013.01.T01:intron | 45.0% |
| !! | TATGGTGGATCTGATGCTTC+TGG | - | Chr4:52096521-52096540 | MsG0480021013.01.T01:three_prime_UTR | 45.0% |
| !! | TCCCAATCAATCTCTAGGGT+AGG | - | Chr4:52096322-52096341 | MsG0480021013.01.T01:three_prime_UTR | 45.0% |
| !!! | GTGTTTTTAGGAGGAGCATG+TGG | - | Chr4:52096800-52096819 | MsG0480021013.01.T01:CDS | 45.0% |
| !! | TTAAAAAAAAATGAAAATTT+AGG | + | Chr4:52098493-52098512 | None:intergenic | 5.0% |
| !!! | ATTATTTTTAGATTTTATTT+TGG | + | Chr4:52097459-52097478 | None:intergenic | 5.0% |
| AGTATATACTCCCTCCGTCC+CGG | + | Chr4:52098344-52098363 | None:intergenic | 50.0% | |
| ATCTGATGCTTCTGGCACCA+TGG | - | Chr4:52096529-52096548 | MsG0480021013.01.T01:three_prime_UTR | 50.0% | |
| ATTAGCAACGTAGCAGGTGC+TGG | - | Chr4:52098825-52098844 | MsG0480021013.01.T01:CDS | 50.0% | |
| ATTCCACCACGCTTTCTGCA+TGG | + | Chr4:52098762-52098781 | None:intergenic | 50.0% | |
| GCTAACCTGCGATAAGCAAC+AGG | + | Chr4:52097115-52097134 | None:intergenic | 50.0% | |
| GCTCCTCCTAGTTGGCAATT+TGG | - | Chr4:52099008-52099027 | MsG0480021013.01.T01:intron | 50.0% | |
| GGAACATTGCTCCTCCTAGT+TGG | - | Chr4:52099000-52099019 | MsG0480021013.01.T01:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | - | Chr4:52098331-52098350 | MsG0480021013.01.T01:intron | 50.0% | |
| GTCGCTGCTTGAAACACGAA+AGG | + | Chr4:52098961-52098980 | None:intergenic | 50.0% | |
| TCAGAACTGGCAATCCAACG+CGG | - | Chr4:52098914-52098933 | MsG0480021013.01.T01:CDS | 50.0% | |
| TCTGATGCTTCTGGCACCAT+GGG | - | Chr4:52096530-52096549 | MsG0480021013.01.T01:three_prime_UTR | 50.0% | |
| TGACCACCAGAGTAAACACC+AGG | + | Chr4:52096476-52096495 | None:intergenic | 50.0% | |
| TTAAGTTACTCCCTCCGTCC+CGG | - | Chr4:52098118-52098137 | MsG0480021013.01.T01:intron | 50.0% | |
| TTGATTGGGCAGTGAGAGTG+TGG | + | Chr4:52096294-52096313 | None:intergenic | 50.0% | |
| ! | CAGTGAGAGTGTGGAAGAGT+GGG | + | Chr4:52096285-52096304 | None:intergenic | 50.0% |
| ! | TTAGGAGGAGCATGTGGGTA+CGG | - | Chr4:52096806-52096825 | MsG0480021013.01.T01:CDS | 50.0% |
| ! | TTGTCCCTGTTGCTTATCGC+AGG | - | Chr4:52097107-52097126 | MsG0480021013.01.T01:intron | 50.0% |
| !! | GCAATCCAACGCGGTTTTAG+TGG | - | Chr4:52098923-52098942 | MsG0480021013.01.T01:CDS | 50.0% |
| ATGCCACTGAGCCGAAACTG+GGG | - | Chr4:52098891-52098910 | MsG0480021013.01.T01:CDS | 55.0% | |
| GATGCCACTGAGCCGAAACT+GGG | - | Chr4:52098890-52098909 | MsG0480021013.01.T01:CDS | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | - | Chr4:52098330-52098349 | MsG0480021013.01.T01:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | Chr4:52098131-52098150 | None:intergenic | 55.0% | |
| TCAGTGGCATCCACTCGGTT+CGG | + | Chr4:52098881-52098900 | None:intergenic | 55.0% | |
| TGAAAGGAACCCGAACCGAG+TGG | - | Chr4:52098868-52098887 | MsG0480021013.01.T01:CDS | 55.0% | |
| ! | GCAGTGAGAGTGTGGAAGAG+TGG | + | Chr4:52096286-52096305 | None:intergenic | 55.0% |
| ! | GCCAGTTCTGACCCCAGTTT+CGG | + | Chr4:52098905-52098924 | None:intergenic | 55.0% |
| ! | GGTTCGGGTTCCTTTCACGT+AGG | + | Chr4:52098865-52098884 | None:intergenic | 55.0% |
| ATCGTGCGCGCCTACGTGAA+AGG | - | Chr4:52098852-52098871 | MsG0480021013.01.T01:CDS | 60.0% | |
| CAGTGGCATCCACTCGGTTC+GGG | + | Chr4:52098880-52098899 | None:intergenic | 60.0% | |
| CTGGCCCACTAAAACCGCGT+TGG | + | Chr4:52098931-52098950 | None:intergenic | 60.0% | |
| GCCGAAACTGGGGTCAGAAC+TGG | - | Chr4:52098901-52098920 | MsG0480021013.01.T01:CDS | 60.0% | |
| GGATGCCACTGAGCCGAAAC+TGG | - | Chr4:52098889-52098908 | MsG0480021013.01.T01:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | Chr4:52098132-52098151 | None:intergenic | 60.0% | |
| TCGGCTCAGTGGCATCCACT+CGG | + | Chr4:52098886-52098905 | None:intergenic | 60.0% | |
| TGACCCCAGTTTCGGCTCAG+TGG | + | Chr4:52098897-52098916 | None:intergenic | 60.0% | |
| ! | AGGGTGCCATGCAGAAAGCG+TGG | - | Chr4:52098753-52098772 | MsG0480021013.01.T01:CDS | 60.0% |
| ! | GTGCCATGCAGAAAGCGTGG+TGG | - | Chr4:52098756-52098775 | MsG0480021013.01.T01:CDS | 60.0% |
| !! | CAACGCGGTTTTAGTGGGCC+AGG | - | Chr4:52098929-52098948 | MsG0480021013.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 52096279 | 52099523 | 52096279 | ID=MsG0480021013.01;Name=MsG0480021013.01 |
| Chr4 | mRNA | 52096279 | 52099523 | 52096279 | ID=MsG0480021013.01.T01;Parent=MsG0480021013.01;Name=MsG0480021013.01.T01;_AED=0.30;_eAED=0.30;_QI=125|1|1|1|1|1|3|459|258 |
| Chr4 | exon | 52096279 | 52097047 | 52096279 | ID=MsG0480021013.01.T01:exon:769;Parent=MsG0480021013.01.T01 |
| Chr4 | exon | 52098674 | 52098992 | 52098674 | ID=MsG0480021013.01.T01:exon:768;Parent=MsG0480021013.01.T01 |
| Chr4 | exon | 52099251 | 52099523 | 52099251 | ID=MsG0480021013.01.T01:exon:767;Parent=MsG0480021013.01.T01 |
| Chr4 | five_prime_UTR | 52099399 | 52099523 | 52099399 | ID=MsG0480021013.01.T01:five_prime_utr;Parent=MsG0480021013.01.T01 |
| Chr4 | CDS | 52099251 | 52099398 | 52099251 | ID=MsG0480021013.01.T01:cds;Parent=MsG0480021013.01.T01 |
| Chr4 | CDS | 52098674 | 52098992 | 52098674 | ID=MsG0480021013.01.T01:cds;Parent=MsG0480021013.01.T01 |
| Chr4 | CDS | 52096738 | 52097047 | 52096738 | ID=MsG0480021013.01.T01:cds;Parent=MsG0480021013.01.T01 |
| Chr4 | three_prime_UTR | 52096279 | 52096737 | 52096279 | ID=MsG0480021013.01.T01:three_prime_utr;Parent=MsG0480021013.01.T01 |
| Gene Sequence |
| Protein sequence |
