Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017061.01.T01 | XP_003602904.2 | 97.872 | 517 | 8 | 1 | 1 | 514 | 1 | 517 | 0 | 1041 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017061.01.T01 | Q9LEU8 | 73.885 | 471 | 123 | 0 | 43 | 513 | 44 | 514 | 0 | 756 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017061.01.T01 | G7J530 | 97.872 | 517 | 8 | 1 | 1 | 514 | 1 | 517 | 0.0 | 1041 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048298.01 | MsG0380017061.01 | 0.818803 | 1.619777e-52 | 1.224687e-49 |
| MsG0180000145.01 | MsG0380017061.01 | 0.802420 | 5.657741e-49 | 2.770325e-46 |
| MsG0180000807.01 | MsG0380017061.01 | 0.841934 | 3.514911e-58 | 5.245312e-55 |
| MsG0180001172.01 | MsG0380017061.01 | 0.835655 | 1.478365e-56 | 1.819598e-53 |
| MsG0180001186.01 | MsG0380017061.01 | 0.816432 | 5.547435e-52 | 3.929980e-49 |
| MsG0180001892.01 | MsG0380017061.01 | 0.803988 | 2.679534e-49 | 1.365786e-46 |
| MsG0180003656.01 | MsG0380017061.01 | 0.825750 | 3.952852e-54 | 3.635251e-51 |
| MsG0180003786.01 | MsG0380017061.01 | 0.811488 | 6.828387e-51 | 4.232515e-48 |
| MsG0180003920.01 | MsG0380017061.01 | 0.828943 | 6.786561e-55 | 6.845015e-52 |
| MsG0180003943.01 | MsG0380017061.01 | 0.816446 | 5.507926e-52 | 3.903406e-49 |
| MsG0180003951.01 | MsG0380017061.01 | 0.812018 | 5.236423e-51 | 3.291703e-48 |
| MsG0180004463.01 | MsG0380017061.01 | 0.816610 | 5.060882e-52 | 3.602937e-49 |
| MsG0180004975.01 | MsG0380017061.01 | 0.829069 | 6.326879e-55 | 6.405055e-52 |
| MsG0180005400.01 | MsG0380017061.01 | 0.807438 | 5.054107e-50 | 2.815071e-47 |
| MsG0180005919.01 | MsG0380017061.01 | 0.806131 | 9.549024e-50 | 5.142486e-47 |
| MsG0180006000.01 | MsG0380017061.01 | 0.862811 | 3.889601e-64 | 1.154269e-60 |
| MsG0280006323.01 | MsG0380017061.01 | 0.824924 | 6.200182e-54 | 5.569708e-51 |
| MsG0280006405.01 | MsG0380017061.01 | 0.812461 | 4.189789e-51 | 2.665736e-48 |
| MsG0280010886.01 | MsG0380017061.01 | 0.812516 | 4.076006e-51 | 2.597024e-48 |
| MsG0280010992.01 | MsG0380017061.01 | 0.826690 | 2.362319e-54 | 2.231331e-51 |
| MsG0280011341.01 | MsG0380017061.01 | 0.818563 | 1.836567e-52 | 1.379461e-49 |
| MsG0280011416.01 | MsG0380017061.01 | 0.832166 | 1.103805e-55 | 1.223743e-52 |
| MsG0380013178.01 | MsG0380017061.01 | 0.867635 | 1.183575e-65 | 4.161118e-62 |
| MsG0380014924.01 | MsG0380017061.01 | 0.802842 | 4.630305e-49 | 2.291740e-46 |
| MsG0380015332.01 | MsG0380017061.01 | 0.810551 | 1.089543e-50 | 6.587273e-48 |
| MsG0380015363.01 | MsG0380017061.01 | 0.841050 | 6.009361e-58 | 8.723259e-55 |
| MsG0380015463.01 | MsG0380017061.01 | 0.813009 | 3.178884e-51 | 2.051901e-48 |
| MsG0380015808.01 | MsG0380017061.01 | 0.827341 | 1.650458e-54 | 1.589068e-51 |
| MsG0380015875.01 | MsG0380017061.01 | 0.815346 | 9.689814e-52 | 6.663904e-49 |
| MsG0380016140.01 | MsG0380017061.01 | 0.834386 | 3.087880e-56 | 3.658854e-53 |
| MsG0380016247.01 | MsG0380017061.01 | 0.814752 | 1.313104e-51 | 8.885419e-49 |
| MsG0380016919.01 | MsG0380017061.01 | 0.802461 | 5.550336e-49 | 2.720416e-46 |
| MsG0380016920.01 | MsG0380017061.01 | 0.880466 | 5.363096e-70 | 3.025584e-66 |
| MsG0380016970.01 | MsG0380017061.01 | 0.807025 | 6.183537e-50 | 3.407322e-47 |
| MsG0380017061.01 | MsG0380017365.01 | 0.802147 | 6.440324e-49 | 3.131459e-46 |
| MsG0380017061.01 | MsG0380017996.01 | 0.808679 | 2.750353e-50 | 1.582470e-47 |
| MsG0380017061.01 | MsG0380018005.01 | 0.817157 | 3.814255e-52 | 2.756475e-49 |
| MsG0380017061.01 | MsG0380018045.01 | 0.810960 | 8.890241e-51 | 5.434620e-48 |
| MsG0380017061.01 | MsG0480018163.01 | 0.813996 | 1.929048e-51 | 1.278910e-48 |
| MsG0380017061.01 | MsG0480020402.01 | 0.852348 | 4.898392e-61 | 1.020568e-57 |
| MsG0380017061.01 | MsG0480020699.01 | 0.873140 | 1.851752e-67 | 7.950285e-64 |
| MsG0380017061.01 | MsG0480020836.01 | 0.819011 | 1.452822e-52 | 1.104943e-49 |
| MsG0380017061.01 | MsG0480020847.01 | 0.829728 | 4.375929e-55 | 4.517232e-52 |
| MsG0380017061.01 | MsG0480020909.01 | 0.848914 | 4.522495e-60 | 8.429384e-57 |
| MsG0380017061.01 | MsG0480021138.01 | 0.802002 | 6.897468e-49 | 3.341315e-46 |
| MsG0380017061.01 | MsG0480021322.01 | 0.825694 | 4.077123e-54 | 3.743440e-51 |
| MsG0380017061.01 | MsG0480021491.01 | 0.847774 | 9.344609e-60 | 1.678691e-56 |
| MsG0380017061.01 | MsG0480022045.01 | 0.844484 | 7.348514e-59 | 1.188108e-55 |
| MsG0380017061.01 | MsG0480022164.01 | 0.800799 | 1.216352e-48 | 5.715667e-46 |
| MsG0380017061.01 | MsG0480022549.01 | 0.853685 | 2.029701e-61 | 4.421834e-58 |
| MsG0380017061.01 | MsG0480022755.01 | 0.807338 | 5.306613e-50 | 2.948081e-47 |
| MsG0380017061.01 | MsG0480022796.01 | 0.869447 | 3.074991e-66 | 1.154589e-62 |
| MsG0380017061.01 | MsG0480023202.01 | 0.836637 | 8.326557e-57 | 1.055496e-53 |
| MsG0380017061.01 | MsG0480023463.01 | 0.844101 | 9.313997e-59 | 1.487943e-55 |
| MsG0380017061.01 | MsG0580024317.01 | 0.850882 | 1.274135e-60 | 2.532304e-57 |
| MsG0380017061.01 | MsG0580024426.01 | 0.841424 | 4.791397e-58 | 7.037718e-55 |
| MsG0380017061.01 | MsG0580024961.01 | 0.844961 | 5.465828e-59 | 8.971012e-56 |
| MsG0380017061.01 | MsG0580025645.01 | 0.807644 | 4.570844e-50 | 2.559478e-47 |
| MsG0380017061.01 | MsG0580026089.01 | 0.801840 | 7.447010e-49 | 3.592866e-46 |
| MsG0380017061.01 | MsG0580026145.01 | 0.842200 | 2.990362e-58 | 4.499904e-55 |
| MsG0380017061.01 | MsG0580030080.01 | 0.821129 | 4.757488e-53 | 3.837494e-50 |
| MsG0380017061.01 | MsG0680030918.01 | 0.838758 | 2.377389e-57 | 3.215496e-54 |
| MsG0380017061.01 | MsG0680032935.01 | 0.830167 | 3.420944e-55 | 3.576187e-52 |
| MsG0380017061.01 | MsG0680034853.01 | 0.819184 | 1.327255e-52 | 1.014137e-49 |
| MsG0380017061.01 | MsG0780036477.01 | 0.809070 | 2.269250e-50 | 1.319312e-47 |
| MsG0380017061.01 | MsG0780036815.01 | 0.827440 | 1.562302e-54 | 1.508453e-51 |
| MsG0380017061.01 | MsG0780036816.01 | 0.809707 | 1.656134e-50 | 9.793645e-48 |
| MsG0380017061.01 | MsG0780038332.01 | 0.826651 | 2.413548e-54 | 2.277201e-51 |
| MsG0380017061.01 | MsG0780038424.01 | 0.800764 | 1.236875e-48 | 5.806869e-46 |
| MsG0380017061.01 | MsG0780039527.01 | 0.821345 | 4.242618e-53 | 3.442695e-50 |
| MsG0380017061.01 | MsG0780039866.01 | 0.830221 | 3.317304e-55 | 3.473430e-52 |
| MsG0380017061.01 | MsG0780040057.01 | 0.859433 | 4.149627e-63 | 1.095776e-59 |
| MsG0380017061.01 | MsG0780040529.01 | 0.812269 | 4.615245e-51 | 2.921247e-48 |
| MsG0380017061.01 | MsG0780040765.01 | 0.804132 | 2.501823e-49 | 1.279827e-46 |
| MsG0380017061.01 | MsG0780041735.01 | 0.832584 | 8.694937e-56 | 9.761292e-53 |
| MsG0380017061.01 | MsG0880041986.01 | 0.843654 | 1.226476e-58 | 1.932208e-55 |
| MsG0380017061.01 | MsG0880042091.01 | 0.807149 | 5.819628e-50 | 3.217115e-47 |
| MsG0380017061.01 | MsG0880042380.01 | 0.825653 | 4.167836e-54 | 3.822351e-51 |
| MsG0380017061.01 | MsG0880042412.01 | 0.821051 | 4.957843e-53 | 3.990729e-50 |
| MsG0380017061.01 | MsG0880042844.01 | 0.802721 | 4.904244e-49 | 2.419827e-46 |
| MsG0380017061.01 | MsG0880043614.01 | 0.876549 | 1.278046e-68 | 6.221541e-65 |
| MsG0380017061.01 | MsG0880045691.01 | 0.844976 | 5.414725e-59 | 8.891881e-56 |
| MsG0380017061.01 | MsG0880045988.01 | 0.805748 | 1.149380e-49 | 6.129801e-47 |
| MsG0380017061.01 | MsG0880046059.01 | 0.814801 | 1.280389e-51 | 8.675825e-49 |
| MsG0380017061.01 | MsG0880046649.01 | 0.806590 | 7.640861e-50 | 4.163278e-47 |
| MsG0380017061.01 | MsG0880047647.01 | 0.834054 | 3.741867e-56 | 4.389513e-53 |
| MsG0280006469.01 | MsG0380017061.01 | 0.803330 | 3.671160e-49 | 1.839639e-46 |
| MsG0280006487.01 | MsG0380017061.01 | 0.826478 | 2.653411e-54 | 2.491178e-51 |
| MsG0280006712.01 | MsG0380017061.01 | 0.832033 | 1.190536e-55 | 1.314926e-52 |
| MsG0280006783.01 | MsG0380017061.01 | 0.848399 | 6.282624e-60 | 1.151510e-56 |
| MsG0280007997.01 | MsG0380017061.01 | 0.816995 | 4.148448e-52 | 2.984868e-49 |
| MsG0280009794.01 | MsG0380017061.01 | 0.833826 | 4.265479e-56 | 4.970202e-53 |
| MsG0280010015.01 | MsG0380017061.01 | 0.837608 | 4.701754e-57 | 6.139839e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017061.01.T01 | MTR_3g100220 | 97.872 | 517 | 8 | 1 | 1 | 514 | 1 | 517 | 0.0 | 1041 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017061.01.T01 | AT5G10920 | 73.885 | 471 | 123 | 0 | 43 | 513 | 44 | 514 | 0.0 | 756 |
Find 134 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGTGTTAGAACTATTT+TGG | 0.122795 | 3:+91451594 | MsG0380017061.01.T01:CDS |
| TCGAGAGTGGTGAGTTTAAT+TGG | 0.187249 | 3:+91450202 | MsG0380017061.01.T01:CDS |
| ACCCCAAAGTTTAGCTTCTT+TGG | 0.192503 | 3:-91449915 | None:intergenic |
| AAACACAAGTTTATTATTTC+AGG | 0.200820 | 3:-91452583 | None:intergenic |
| ATCCAGAAATTTATTTCTTA+TGG | 0.205292 | 3:+91452453 | MsG0380017061.01.T01:CDS |
| AACCATAAGAAATAAATTTC+TGG | 0.214883 | 3:-91452455 | None:intergenic |
| CGCTGAGAACGCACTTATTT+CGG | 0.220303 | 3:+91449708 | None:intergenic |
| AGCAGCATTGTTGGTGGTTT+GGG | 0.225995 | 3:-91449888 | None:intergenic |
| CTGTGGGCTTCAGAGGAATT+TGG | 0.246553 | 3:+91451239 | MsG0380017061.01.T01:CDS |
| TTGCCGACCAACTCGATTAT+TGG | 0.269342 | 3:+91452496 | MsG0380017061.01.T01:CDS |
| TAGCAGCATTGTTGGTGGTT+TGG | 0.303920 | 3:-91449889 | None:intergenic |
| GCTTGTGCGTTGGCTGGTAC+AGG | 0.319298 | 3:+91450925 | MsG0380017061.01.T01:CDS |
| CCCCAAAGTTTAGCTTCTTT+GGG | 0.325278 | 3:-91449914 | None:intergenic |
| ATATCATGAGATGTTCTAAA+TGG | 0.325994 | 3:-91452300 | None:intergenic |
| GTTTGATCAGTGCGAGTGAT+AGG | 0.329792 | 3:+91450139 | MsG0380017061.01.T01:CDS |
| GGATTCTATTATTGAAGGTT+TGG | 0.334686 | 3:+91450161 | MsG0380017061.01.T01:CDS |
| GGTAAGTCTGCCAGAGTCAT+AGG | 0.335284 | 3:+91451347 | MsG0380017061.01.T01:CDS |
| AACTTGATCATTTCTACTTC+TGG | 0.342542 | 3:-91450310 | None:intergenic |
| TTTGGGTTTAGCAGCATTGT+TGG | 0.350008 | 3:-91449897 | None:intergenic |
| TGGTGGTTTGGGCTTGCATT+CGG | 0.369857 | 3:-91449877 | None:intergenic |
| GGTGGTTTGGGCTTGCATTC+GGG | 0.373779 | 3:-91449876 | None:intergenic |
| AAGGATGTGTATGAATTTCT+TGG | 0.377849 | 3:+91452417 | MsG0380017061.01.T01:CDS |
| TGCATCCATGCTCGCTAAAC+AGG | 0.390409 | 3:+91450042 | MsG0380017061.01.T01:CDS |
| ACCCAAAGAAGCTAAACTTT+GGG | 0.395380 | 3:+91449913 | MsG0380017061.01.T01:CDS |
| CAATGAACATTACTTTCAAT+CGG | 0.395660 | 3:+91451644 | MsG0380017061.01.T01:CDS |
| TGCTTACAATCGTGATTTGC+AGG | 0.397013 | 3:+91451412 | MsG0380017061.01.T01:CDS |
| GATTCTATTATTGAAGGTTT+GGG | 0.400207 | 3:+91450162 | MsG0380017061.01.T01:CDS |
| CTGTTGAAACAGAATCGCTT+GGG | 0.414810 | 3:-91451271 | None:intergenic |
| ATCATGTTGCATATTTGAAT+AGG | 0.416564 | 3:+91452613 | MsG0380017061.01.T01:three_prime_UTR |
| GCAAGAAGCTCACGACTTCA+AGG | 0.418350 | 3:-91452727 | None:intergenic |
| AAGAATACAAAAGGCTTTAC+CGG | 0.418379 | 3:+91451669 | MsG0380017061.01.T01:CDS |
| CGCTGATTATCTTGTTAAGA+AGG | 0.421388 | 3:+91451717 | MsG0380017061.01.T01:CDS |
| CCCTGAAAATTGTTCATCCA+TGG | 0.422864 | 3:+91449736 | MsG0380017061.01.T01:exon |
| AGTGGAGGATCGAGTTGTTA+AGG | 0.423526 | 3:-91449828 | None:intergenic |
| AATCACGGTCTTATTGTTCC+TGG | 0.423631 | 3:+91450429 | MsG0380017061.01.T01:CDS |
| TTAGGGGCTTGTGCGTTGGC+TGG | 0.427204 | 3:+91450919 | MsG0380017061.01.T01:CDS |
| AGAAGGTGCTGTAATAAAAC+AGG | 0.428088 | 3:-91450477 | None:intergenic |
| TTACTGCTCCAATGAGGAAT+AGG | 0.432342 | 3:+91450989 | MsG0380017061.01.T01:CDS |
| AACCCAAAGAAGCTAAACTT+TGG | 0.437199 | 3:+91449912 | MsG0380017061.01.T01:CDS |
| TGGTGGAAAGGGAGTGGGTA+CGG | 0.440215 | 3:-91449805 | None:intergenic |
| TTCTCGACTTGGTGAAGAAT+GGG | 0.446818 | 3:+91451214 | MsG0380017061.01.T01:CDS |
| GAGTGGGTACGGAGTGGAGA+GGG | 0.447228 | 3:-91449794 | None:intergenic |
| TTTCTCGACTTGGTGAAGAA+TGG | 0.448284 | 3:+91451213 | MsG0380017061.01.T01:CDS |
| TCAACTTTCATTGCTTAAGC+TGG | 0.453847 | 3:+91450398 | MsG0380017061.01.T01:CDS |
| TTTAGCCAAGGTTACTGAAT+GGG | 0.454107 | 3:+91452675 | MsG0380017061.01.T01:three_prime_UTR |
| AATGAACATTACTTTCAATC+GGG | 0.455024 | 3:+91451645 | MsG0380017061.01.T01:CDS |
| TTTATTTCTTATGGTTCCAC+CGG | 0.456153 | 3:+91452462 | MsG0380017061.01.T01:CDS |
| ATTCATGACATCGGATGCAT+TGG | 0.456659 | 3:+91450963 | MsG0380017061.01.T01:CDS |
| TTGCAGATTGAGCGTGATGC+TGG | 0.458156 | 3:+91450856 | MsG0380017061.01.T01:intron |
| TTATACAAACATGACATTAG+AGG | 0.459314 | 3:+91450007 | MsG0380017061.01.T01:CDS |
| CCAAGCGATTCTGTTTCAAC+AGG | 0.459444 | 3:+91451272 | MsG0380017061.01.T01:CDS |
| CGATGTCATGAATCGATCAA+TGG | 0.461237 | 3:-91450953 | None:intergenic |
| ATCAAAGAATTGCCAACTGT+TGG | 0.463984 | 3:+91452350 | MsG0380017061.01.T01:CDS |
| GTAAGATACCTATTCCTCAT+TGG | 0.466006 | 3:-91450997 | None:intergenic |
| CCTGTTGAAACAGAATCGCT+TGG | 0.466168 | 3:-91451272 | None:intergenic |
| TACACATCCTTGTCAAAGAC+TGG | 0.467066 | 3:-91452405 | None:intergenic |
| CTTGTGCGTTGGCTGGTACA+GGG | 0.468110 | 3:+91450926 | MsG0380017061.01.T01:CDS |
| AGTTGTTAAGGTGGTGGAAA+GGG | 0.469339 | 3:-91449816 | None:intergenic |
| CGAACAAGTTCCATTGGATC+AGG | 0.470603 | 3:-91451323 | None:intergenic |
| ATTTAGCCAAGGTTACTGAA+TGG | 0.474940 | 3:+91452674 | MsG0380017061.01.T01:three_prime_UTR |
| GCTGCTCTTACTGATTTGAT+TGG | 0.475293 | 3:+91450261 | MsG0380017061.01.T01:CDS |
| CCTAACCTGTTTAGCGAGCA+TGG | 0.475927 | 3:-91450047 | None:intergenic |
| CAATCGGGAAAGAATACAAA+AGG | 0.481128 | 3:+91451660 | MsG0380017061.01.T01:CDS |
| TCCTTTAGGGGCTTGTGCGT+TGG | 0.482828 | 3:+91450915 | MsG0380017061.01.T01:CDS |
| GAAGTATGTAACTTCTTAGC+AGG | 0.486485 | 3:-91450288 | None:intergenic |
| AAGAGTATCCTAGTTGTCAC+TGG | 0.487293 | 3:+91452542 | MsG0380017061.01.T01:exon |
| TATGAAATAAAGTATTTGGA+TGG | 0.490532 | 3:+91452805 | MsG0380017061.01.T01:three_prime_UTR |
| GATAGGGATTCTATTATTGA+AGG | 0.491597 | 3:+91450156 | MsG0380017061.01.T01:CDS |
| TTCTGACCGAGATTTCCTAC+TGG | 0.492656 | 3:+91451154 | MsG0380017061.01.T01:CDS |
| TTCATGACATCGGATGCATT+GGG | 0.494059 | 3:+91450964 | MsG0380017061.01.T01:CDS |
| TAATTGGAGAGCTGATAGAG+AGG | 0.498860 | 3:+91450218 | MsG0380017061.01.T01:CDS |
| ATACAAAAGGCTTTACCGGC+TGG | 0.499237 | 3:+91451673 | MsG0380017061.01.T01:CDS |
| TTCGGGTTATGATGAATTTG+CGG | 0.501030 | 3:-91449859 | None:intergenic |
| TTAAGGTGGTGGAAAGGGAG+TGG | 0.505785 | 3:-91449811 | None:intergenic |
| GGGTTTAGCAGCATTGTTGG+TGG | 0.506523 | 3:-91449894 | None:intergenic |
| GAATTTGCGGTTAGTGAAAG+TGG | 0.510133 | 3:-91449846 | None:intergenic |
| GGATCGAGTTGTTAAGGTGG+TGG | 0.511715 | 3:-91449822 | None:intergenic |
| TCTGCTTGCTTATGTTGAAG+AGG | 0.512207 | 3:+91450497 | MsG0380017061.01.T01:CDS |
| AGAACATCTCATGATATAGC+AGG | 0.515600 | 3:+91452306 | MsG0380017061.01.T01:CDS |
| GATGTCATGAATCGATCAAT+GGG | 0.518952 | 3:-91450952 | None:intergenic |
| ATGGGTACTGTGGGCTTCAG+AGG | 0.519124 | 3:+91451232 | MsG0380017061.01.T01:CDS |
| CAGCTTCCCCAGTGACAACT+AGG | 0.524290 | 3:-91452550 | None:intergenic |
| GTAAGTCTGCCAGAGTCATA+GGG | 0.524586 | 3:+91451348 | MsG0380017061.01.T01:CDS |
| GTTTGATTGATTGTAGAGCT+AGG | 0.529508 | 3:+91450881 | MsG0380017061.01.T01:CDS |
| GCAGTGCACCTTTCTCGACT+TGG | 0.530755 | 3:+91451203 | MsG0380017061.01.T01:CDS |
| TTGTTACTGATTTACGACTT+TGG | 0.532012 | 3:+91450331 | MsG0380017061.01.T01:CDS |
| TTTGATCAGTGCGAGTGATA+GGG | 0.532025 | 3:+91450140 | MsG0380017061.01.T01:CDS |
| TAAGGTGGTGGAAAGGGAGT+GGG | 0.532635 | 3:-91449810 | None:intergenic |
| AGTGAATCGTTCAACGGCGT+CGG | 0.532926 | 3:-91449960 | None:intergenic |
| GTCGGCAACACAAGCAGACC+CGG | 0.542747 | 3:-91452481 | None:intergenic |
| TTACCACGAACAAGTTCCAT+TGG | 0.545026 | 3:-91451329 | None:intergenic |
| ATTCTTCACCAAGTCGAGAA+AGG | 0.545808 | 3:-91451211 | None:intergenic |
| AACTACCCATTCAGTAACCT+TGG | 0.554249 | 3:-91452680 | None:intergenic |
| GAGTTGTTAAGGTGGTGGAA+AGG | 0.558676 | 3:-91449817 | None:intergenic |
| GAAACTCCAGTAGGAAATCT+CGG | 0.563571 | 3:-91451160 | None:intergenic |
| ATTGAAAAGAGAATCGAGAG+TGG | 0.563997 | 3:+91450189 | MsG0380017061.01.T01:CDS |
| CATCCAATAATCGAGTTGGT+CGG | 0.565893 | 3:-91452499 | None:intergenic |
| GAAAGGGAGTGGGTACGGAG+TGG | 0.566617 | 3:-91449800 | None:intergenic |
| TGGGGTGGTAGATTCGAAGA+AGG | 0.568029 | 3:+91449932 | MsG0380017061.01.T01:CDS |
| GCCAACGCACAAGCCCCTAA+AGG | 0.569555 | 3:-91450916 | None:intergenic |
| CGCTGCAAATGAGTATAACC+AGG | 0.570144 | 3:-91450447 | None:intergenic |
| GAGAGCTGAAGAGAAAACCA+TGG | 0.571386 | 3:-91449753 | None:intergenic |
| AGAAAGGTGCACTGCTGTGA+TGG | 0.574379 | 3:-91451195 | None:intergenic |
| CTACATAAGTTCATGCTGCA+TGG | 0.577413 | 3:-91452777 | None:intergenic |
| GATCCAATGGAACTTGTTCG+TGG | 0.578604 | 3:+91451326 | MsG0380017061.01.T01:CDS |
| CAAGACTCAAATCCAACAGT+TGG | 0.580199 | 3:-91452362 | None:intergenic |
| GCAATTCTTTGATGTGCACA+AGG | 0.581551 | 3:-91452340 | None:intergenic |
| TGGTGAAGAATGGGTACTGT+GGG | 0.591067 | 3:+91451223 | MsG0380017061.01.T01:CDS |
| TAACTGTTTATCATAAGAGA+CGG | 0.595595 | 3:-91449987 | None:intergenic |
| AGAGTATCCTAGTTGTCACT+GGG | 0.596813 | 3:+91452543 | MsG0380017061.01.T01:three_prime_UTR |
| AAGCTGGCTTTGAACAATCA+CGG | 0.602310 | 3:+91450414 | MsG0380017061.01.T01:CDS |
| GGAGTGGGTACGGAGTGGAG+AGG | 0.607767 | 3:-91449795 | None:intergenic |
| CCCAAAGAAGCTAAACTTTG+GGG | 0.616189 | 3:+91449914 | MsG0380017061.01.T01:CDS |
| CATTGATCGATTCATGACAT+CGG | 0.617561 | 3:+91450954 | MsG0380017061.01.T01:CDS |
| CTTCAACATAAGCAAGCAGA+AGG | 0.625456 | 3:-91450494 | None:intergenic |
| GGAGGATCGAGTTGTTAAGG+TGG | 0.625570 | 3:-91449825 | None:intergenic |
| ACTCTTCTCACATTGTGCAA+AGG | 0.630735 | 3:+91451380 | MsG0380017061.01.T01:CDS |
| CATATTGAATAGTATCGATG+CGG | 0.633815 | 3:+91451130 | MsG0380017061.01.T01:intron |
| GTTCTAACACTGTCAAACAC+TGG | 0.634639 | 3:-91451586 | None:intergenic |
| TGGGATTTACTGCTCCAATG+AGG | 0.636183 | 3:+91450983 | MsG0380017061.01.T01:CDS |
| TTATTTCTTATGGTTCCACC+GGG | 0.642386 | 3:+91452463 | MsG0380017061.01.T01:CDS |
| TGTTGAAACAGAATCGCTTG+GGG | 0.644193 | 3:-91451270 | None:intergenic |
| TTGGTGAAGAATGGGTACTG+TGG | 0.649560 | 3:+91451222 | MsG0380017061.01.T01:CDS |
| GGATTCAGTGAATCGTTCAA+CGG | 0.655801 | 3:-91449966 | None:intergenic |
| TAACAGAGAGAAACTCCAGT+AGG | 0.660772 | 3:-91451169 | None:intergenic |
| TAAGTCTGCCAGAGTCATAG+GGG | 0.665309 | 3:+91451349 | MsG0380017061.01.T01:CDS |
| GTTGCATCAAGATAACCAGC+CGG | 0.668367 | 3:-91451688 | None:intergenic |
| AAAGAAGCTAAACTTTGGGG+TGG | 0.671244 | 3:+91449917 | MsG0380017061.01.T01:CDS |
| AAATCACGATTGTAAGCATG+TGG | 0.678548 | 3:-91451407 | None:intergenic |
| TTTGCGGTTAGTGAAAGTGG+AGG | 0.683832 | 3:-91449843 | None:intergenic |
| TATAAATCCAGTCTTTGACA+AGG | 0.699348 | 3:+91452398 | MsG0380017061.01.T01:CDS |
| GGCAACACAAGCAGACCCGG+TGG | 0.702657 | 3:-91452478 | None:intergenic |
| AAGTCTGCCAGAGTCATAGG+GGG | 0.718882 | 3:+91451350 | MsG0380017061.01.T01:CDS |
| GAGTATCCTAGTTGTCACTG+GGG | 0.753628 | 3:+91452544 | MsG0380017061.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATGAAATAAAGTATT+TGG | + | Chr3:91452801-91452820 | MsG0380017061.01.T01:three_prime_UTR | 10.0% |
| !!! | TATTTGAGATTCATTAAAAA+TGG | + | Chr3:91451531-91451550 | MsG0380017061.01.T01:intron | 15.0% |
| !!! | TGAATTTGTGTTTTTTTTTA+GGG | + | Chr3:91450117-91450136 | MsG0380017061.01.T01:intron | 15.0% |
| !!! | TTATTGTATCATTACATTTT+AGG | + | Chr3:91452180-91452199 | MsG0380017061.01.T01:intron | 15.0% |
| !!! | TTGAATTTGTGTTTTTTTTT+AGG | + | Chr3:91450116-91450135 | MsG0380017061.01.T01:intron | 15.0% |
| !! | AAACACAAGTTTATTATTTC+AGG | - | Chr3:91452586-91452605 | None:intergenic | 20.0% |
| !! | AACCATAAGAAATAAATTTC+TGG | - | Chr3:91452458-91452477 | None:intergenic | 20.0% |
| !! | ATATGAATAACAAATCTATG+AGG | - | Chr3:91450661-91450680 | None:intergenic | 20.0% |
| !! | ATTATGTTAATGGAAAAGTA+TGG | + | Chr3:91450562-91450581 | MsG0380017061.01.T01:intron | 20.0% |
| !! | CAAAGTTTGAATTATGTTAA+TGG | + | Chr3:91450552-91450571 | MsG0380017061.01.T01:intron | 20.0% |
| !!! | AAAATGAGCTATTCAATTTT+CGG | + | Chr3:91450598-91450617 | MsG0380017061.01.T01:intron | 20.0% |
| !!! | ATCCAGAAATTTATTTCTTA+TGG | + | Chr3:91452453-91452472 | MsG0380017061.01.T01:CDS | 20.0% |
| !!! | ATGAATTTTAAATTTAGCCA+AGG | + | Chr3:91452663-91452682 | MsG0380017061.01.T01:three_prime_UTR | 20.0% |
| !!! | CTGTATATGACAATATTTTA+TGG | + | Chr3:91452136-91452155 | MsG0380017061.01.T01:intron | 20.0% |
| !!! | TATGAAATAAAGTATTTGGA+TGG | + | Chr3:91452805-91452824 | MsG0380017061.01.T01:three_prime_UTR | 20.0% |
| ! | AAAGAAAAAAGGGTAAGAAT+CGG | - | Chr3:91452265-91452284 | None:intergenic | 25.0% |
| ! | AATGAACATTACTTTCAATC+GGG | + | Chr3:91451645-91451664 | MsG0380017061.01.T01:CDS | 25.0% |
| ! | AATGATAACCATAATCATTG+TGG | - | Chr3:91452034-91452053 | None:intergenic | 25.0% |
| ! | ACTGAATGTTTAGATTTACA+AGG | - | Chr3:91451887-91451906 | None:intergenic | 25.0% |
| ! | AGTACACAATTAACTCTATT+AGG | - | Chr3:91450732-91450751 | None:intergenic | 25.0% |
| ! | AGTGGAAAGATTGTAATAAT+AGG | - | Chr3:91452083-91452102 | None:intergenic | 25.0% |
| ! | ATCATGTTGCATATTTGAAT+AGG | + | Chr3:91452613-91452632 | MsG0380017061.01.T01:three_prime_UTR | 25.0% |
| ! | ATCTATTTCCTTCATTCAAA+TGG | - | Chr3:91451957-91451976 | None:intergenic | 25.0% |
| ! | CAATGAACATTACTTTCAAT+CGG | + | Chr3:91451644-91451663 | MsG0380017061.01.T01:CDS | 25.0% |
| ! | CTGAATGTTTAGATTTACAA+GGG | - | Chr3:91451886-91451905 | None:intergenic | 25.0% |
| ! | GATTCTATTATTGAAGGTTT+GGG | + | Chr3:91450162-91450181 | MsG0380017061.01.T01:CDS | 25.0% |
| ! | TAACTGTTTATCATAAGAGA+CGG | - | Chr3:91449990-91450009 | None:intergenic | 25.0% |
| ! | TTATACAAACATGACATTAG+AGG | + | Chr3:91450007-91450026 | MsG0380017061.01.T01:CDS | 25.0% |
| !! | ATATCATGAGATGTTCTAAA+TGG | - | Chr3:91452303-91452322 | None:intergenic | 25.0% |
| !! | TAATTTTTACCTCAAACTGA+AGG | - | Chr3:91451761-91451780 | None:intergenic | 25.0% |
| !! | TTAATGGAAAAGTATGGATT+TGG | + | Chr3:91450568-91450587 | MsG0380017061.01.T01:intron | 25.0% |
| !!! | ATAGGTATCTTACTTTTTAC+TGG | + | Chr3:91451007-91451026 | MsG0380017061.01.T01:intron | 25.0% |
| !!! | TAACATCATCGTTATTTTAC+CGG | + | Chr3:91450769-91450788 | MsG0380017061.01.T01:intron | 25.0% |
| !!! | TCATTAAAAATGGTTGCTTT+TGG | + | Chr3:91451541-91451560 | MsG0380017061.01.T01:intron | 25.0% |
| AACTTGATCATTTCTACTTC+TGG | - | Chr3:91450313-91450332 | None:intergenic | 30.0% | |
| AAGAATACAAAAGGCTTTAC+CGG | + | Chr3:91451669-91451688 | MsG0380017061.01.T01:CDS | 30.0% | |
| AAGGATGTGTATGAATTTCT+TGG | + | Chr3:91452417-91452436 | MsG0380017061.01.T01:CDS | 30.0% | |
| CCTGAATGTGAAAGAAAAAA+GGG | - | Chr3:91452275-91452294 | None:intergenic | 30.0% | |
| GAGTTAATTGTGTACTTTAG+AGG | + | Chr3:91450736-91450755 | MsG0380017061.01.T01:intron | 30.0% | |
| GATAGGGATTCTATTATTGA+AGG | + | Chr3:91450156-91450175 | MsG0380017061.01.T01:CDS | 30.0% | |
| GGATTCTATTATTGAAGGTT+TGG | + | Chr3:91450161-91450180 | MsG0380017061.01.T01:CDS | 30.0% | |
| GGTAAAATAACGATGATGTT+AGG | - | Chr3:91450770-91450789 | None:intergenic | 30.0% | |
| TATAAATCCAGTCTTTGACA+AGG | + | Chr3:91452398-91452417 | MsG0380017061.01.T01:CDS | 30.0% | |
| TATGATATGAAGTGAAAGCA+TGG | + | Chr3:91451779-91451798 | MsG0380017061.01.T01:intron | 30.0% | |
| TTGAAATTGATCCATGTAGT+TGG | + | Chr3:91451031-91451050 | MsG0380017061.01.T01:intron | 30.0% | |
| TTGCGGAATAAGAAGAAAAT+TGG | - | Chr3:91452234-91452253 | None:intergenic | 30.0% | |
| ! | AGGATGAATTTTTGTCCTTT+AGG | + | Chr3:91450901-91450920 | MsG0380017061.01.T01:CDS | 30.0% |
| ! | GACAGTGTTAGAACTATTTT+GGG | + | Chr3:91451595-91451614 | MsG0380017061.01.T01:CDS | 30.0% |
| ! | GATGAATTTTTGTCCTTTAG+GGG | + | Chr3:91450903-91450922 | MsG0380017061.01.T01:CDS | 30.0% |
| ! | GGATGAATTTTTGTCCTTTA+GGG | + | Chr3:91450902-91450921 | MsG0380017061.01.T01:CDS | 30.0% |
| ! | TGACAGTGTTAGAACTATTT+TGG | + | Chr3:91451594-91451613 | MsG0380017061.01.T01:CDS | 30.0% |
| ! | TTTATTTCTTATGGTTCCAC+CGG | + | Chr3:91452462-91452481 | MsG0380017061.01.T01:CDS | 30.0% |
| ! | TTTTCATCCAATAATCGAGT+TGG | - | Chr3:91452506-91452525 | None:intergenic | 30.0% |
| !! | CATATTGAATAGTATCGATG+CGG | + | Chr3:91451130-91451149 | MsG0380017061.01.T01:intron | 30.0% |
| !! | CTAGTTTTCCACAATGATTA+TGG | + | Chr3:91452023-91452042 | MsG0380017061.01.T01:intron | 30.0% |
| !! | TACAATCTTTCCACTTTTAC+AGG | + | Chr3:91452088-91452107 | MsG0380017061.01.T01:intron | 30.0% |
| !! | TTGTTACTGATTTACGACTT+TGG | + | Chr3:91450331-91450350 | MsG0380017061.01.T01:CDS | 30.0% |
| !!! | CCTTTTTTCTTTCACATTCA+GGG | + | Chr3:91452273-91452292 | MsG0380017061.01.T01:intron | 30.0% |
| !!! | GAATGTTCACGTTTTTTTCT+TGG | + | Chr3:91451083-91451102 | MsG0380017061.01.T01:intron | 30.0% |
| AAATCACGATTGTAAGCATG+TGG | - | Chr3:91451410-91451429 | None:intergenic | 35.0% | |
| AACCCAAAGAAGCTAAACTT+TGG | + | Chr3:91449912-91449931 | MsG0380017061.01.T01:CDS | 35.0% | |
| ACCCAAAGAAGCTAAACTTT+GGG | + | Chr3:91449913-91449932 | MsG0380017061.01.T01:CDS | 35.0% | |
| AGAACATCTCATGATATAGC+AGG | + | Chr3:91452306-91452325 | MsG0380017061.01.T01:CDS | 35.0% | |
| ATCAAAGAATTGCCAACTGT+TGG | + | Chr3:91452350-91452369 | MsG0380017061.01.T01:CDS | 35.0% | |
| ATTGAAAAGAGAATCGAGAG+TGG | + | Chr3:91450189-91450208 | MsG0380017061.01.T01:CDS | 35.0% | |
| ATTGTGGAAAACTAGTACAG+AGG | - | Chr3:91452018-91452037 | None:intergenic | 35.0% | |
| ATTTAGCCAAGGTTACTGAA+TGG | + | Chr3:91452674-91452693 | MsG0380017061.01.T01:three_prime_UTR | 35.0% | |
| CAATCGGGAAAGAATACAAA+AGG | + | Chr3:91451660-91451679 | MsG0380017061.01.T01:CDS | 35.0% | |
| CCCTGAATGTGAAAGAAAAA+AGG | - | Chr3:91452276-91452295 | None:intergenic | 35.0% | |
| CCTTCATTCAAATGGTTCTT+GGG | - | Chr3:91451949-91451968 | None:intergenic | 35.0% | |
| GAAAAAGAATCCTGATCCAA+TGG | + | Chr3:91451313-91451332 | MsG0380017061.01.T01:CDS | 35.0% | |
| GAAGTATGTAACTTCTTAGC+AGG | - | Chr3:91450291-91450310 | None:intergenic | 35.0% | |
| GATGTCATGAATCGATCAAT+GGG | - | Chr3:91450955-91450974 | None:intergenic | 35.0% | |
| GTAAGATACCTATTCCTCAT+TGG | - | Chr3:91451000-91451019 | None:intergenic | 35.0% | |
| GTTTGATTGATTGTAGAGCT+AGG | + | Chr3:91450881-91450900 | MsG0380017061.01.T01:CDS | 35.0% | |
| TCAACTTTCATTGCTTAAGC+TGG | + | Chr3:91450398-91450417 | MsG0380017061.01.T01:CDS | 35.0% | |
| TCCTTCATTCAAATGGTTCT+TGG | - | Chr3:91451950-91451969 | None:intergenic | 35.0% | |
| TTTAGCCAAGGTTACTGAAT+GGG | + | Chr3:91452675-91452694 | MsG0380017061.01.T01:three_prime_UTR | 35.0% | |
| ! | ACCATGGATGAACAATTTTC+AGG | - | Chr3:91449740-91449759 | None:intergenic | 35.0% |
| ! | CATTAACAGGGATTTGAGAT+TGG | - | Chr3:91451846-91451865 | None:intergenic | 35.0% |
| ! | CATTGATCGATTCATGACAT+CGG | + | Chr3:91450954-91450973 | MsG0380017061.01.T01:CDS | 35.0% |
| ! | CCATGGATGAACAATTTTCA+GGG | - | Chr3:91449739-91449758 | None:intergenic | 35.0% |
| ! | CGCTGATTATCTTGTTAAGA+AGG | + | Chr3:91451717-91451736 | MsG0380017061.01.T01:CDS | 35.0% |
| ! | GATTGGTTCATATCTGAACT+TGG | - | Chr3:91451829-91451848 | None:intergenic | 35.0% |
| ! | TTATTTCTTATGGTTCCACC+GGG | + | Chr3:91452463-91452482 | MsG0380017061.01.T01:CDS | 35.0% |
| ! | TTCGGGTTATGATGAATTTG+CGG | - | Chr3:91449862-91449881 | None:intergenic | 35.0% |
| ! | TTGATTTAGCCTTCAGTTTG+AGG | + | Chr3:91451749-91451768 | MsG0380017061.01.T01:intron | 35.0% |
| !! | AACTATTTTGGGAATGCTTG+AGG | + | Chr3:91451606-91451625 | MsG0380017061.01.T01:CDS | 35.0% |
| !! | AGAAGGTGCTGTAATAAAAC+AGG | - | Chr3:91450480-91450499 | None:intergenic | 35.0% |
| !!! | CCCTTTTTTCTTTCACATTC+AGG | + | Chr3:91452272-91452291 | MsG0380017061.01.T01:intron | 35.0% |
| AAATGGTTCTTGGGAATGAG+AGG | - | Chr3:91451940-91451959 | None:intergenic | 40.0% | |
| AACTACCCATTCAGTAACCT+TGG | - | Chr3:91452683-91452702 | None:intergenic | 40.0% | |
| AAGAATCGGTGGCATATTTG+CGG | - | Chr3:91452251-91452270 | None:intergenic | 40.0% | |
| AATGGTTCTTGGGAATGAGA+GGG | - | Chr3:91451939-91451958 | None:intergenic | 40.0% | |
| ACTCTTCTCACATTGTGCAA+AGG | + | Chr3:91451380-91451399 | MsG0380017061.01.T01:CDS | 40.0% | |
| ATTCATGACATCGGATGCAT+TGG | + | Chr3:91450963-91450982 | MsG0380017061.01.T01:CDS | 40.0% | |
| ATTCTTCACCAAGTCGAGAA+AGG | - | Chr3:91451214-91451233 | None:intergenic | 40.0% | |
| CAAGACTCAAATCCAACAGT+TGG | - | Chr3:91452365-91452384 | None:intergenic | 40.0% | |
| CCACAAGCGAATGAATAAAC+CGG | - | Chr3:91450791-91450810 | None:intergenic | 40.0% | |
| CCCAAAGAAGCTAAACTTTG+GGG | + | Chr3:91449914-91449933 | MsG0380017061.01.T01:CDS | 40.0% | |
| CCCAAGAACCATTTGAATGA+AGG | + | Chr3:91451946-91451965 | MsG0380017061.01.T01:intron | 40.0% | |
| CCCTGAAAATTGTTCATCCA+TGG | + | Chr3:91449736-91449755 | MsG0380017061.01.T01:exon | 40.0% | |
| CGATGTCATGAATCGATCAA+TGG | - | Chr3:91450956-91450975 | None:intergenic | 40.0% | |
| CGGTTTATTCATTCGCTTGT+GGG | + | Chr3:91450789-91450808 | MsG0380017061.01.T01:intron | 40.0% | |
| CTACATAAGTTCATGCTGCA+TGG | - | Chr3:91452780-91452799 | None:intergenic | 40.0% | |
| CTGTTAATGTAACCCAGTAC+CGG | + | Chr3:91451857-91451876 | MsG0380017061.01.T01:intron | 40.0% | |
| CTGTTGAAACAGAATCGCTT+GGG | - | Chr3:91451274-91451293 | None:intergenic | 40.0% | |
| CTTCAACATAAGCAAGCAGA+AGG | - | Chr3:91450497-91450516 | None:intergenic | 40.0% | |
| GAAAAAAGGGTAAGAATCGG+TGG | - | Chr3:91452262-91452281 | None:intergenic | 40.0% | |
| GAAACTCCAGTAGGAAATCT+CGG | - | Chr3:91451163-91451182 | None:intergenic | 40.0% | |
| GAATTTGCGGTTAGTGAAAG+TGG | - | Chr3:91449849-91449868 | None:intergenic | 40.0% | |
| GCAATTCTTTGATGTGCACA+AGG | - | Chr3:91452343-91452362 | None:intergenic | 40.0% | |
| GGATTCAGTGAATCGTTCAA+CGG | - | Chr3:91449969-91449988 | None:intergenic | 40.0% | |
| GGTTTATTCATTCGCTTGTG+GGG | + | Chr3:91450790-91450809 | MsG0380017061.01.T01:intron | 40.0% | |
| GTGACTACAACCTGTAAAAG+TGG | - | Chr3:91452101-91452120 | None:intergenic | 40.0% | |
| GTTCTAACACTGTCAAACAC+TGG | - | Chr3:91451589-91451608 | None:intergenic | 40.0% | |
| TAACAGAGAGAAACTCCAGT+AGG | - | Chr3:91451172-91451191 | None:intergenic | 40.0% | |
| TAATTGGAGAGCTGATAGAG+AGG | + | Chr3:91450218-91450237 | MsG0380017061.01.T01:CDS | 40.0% | |
| TACACATCCTTGTCAAAGAC+TGG | - | Chr3:91452408-91452427 | None:intergenic | 40.0% | |
| TCATATCTGAACTTGGACAG+TGG | - | Chr3:91451822-91451841 | None:intergenic | 40.0% | |
| TCGAGAGTGGTGAGTTTAAT+TGG | + | Chr3:91450202-91450221 | MsG0380017061.01.T01:CDS | 40.0% | |
| TCTGCTTGCTTATGTTGAAG+AGG | + | Chr3:91450497-91450516 | MsG0380017061.01.T01:CDS | 40.0% | |
| TGTTGAAACAGAATCGCTTG+GGG | - | Chr3:91451273-91451292 | None:intergenic | 40.0% | |
| TTACCACGAACAAGTTCCAT+TGG | - | Chr3:91451332-91451351 | None:intergenic | 40.0% | |
| TTACTGCTCCAATGAGGAAT+AGG | + | Chr3:91450989-91451008 | MsG0380017061.01.T01:CDS | 40.0% | |
| TTCATGACATCGGATGCATT+GGG | + | Chr3:91450964-91450983 | MsG0380017061.01.T01:CDS | 40.0% | |
| TTTAACATTAGTCCCATGCC+AGG | - | Chr3:91451058-91451077 | None:intergenic | 40.0% | |
| TTTAGATTTACAAGGGCAGC+CGG | - | Chr3:91451879-91451898 | None:intergenic | 40.0% | |
| TTTGATCAGTGCGAGTGATA+GGG | + | Chr3:91450140-91450159 | MsG0380017061.01.T01:CDS | 40.0% | |
| ! | AAAGAAGCTAAACTTTGGGG+TGG | + | Chr3:91449917-91449936 | MsG0380017061.01.T01:CDS | 40.0% |
| ! | ACCCCAAAGTTTAGCTTCTT+TGG | - | Chr3:91449918-91449937 | None:intergenic | 40.0% |
| ! | AGAGTATCCTAGTTGTCACT+GGG | + | Chr3:91452543-91452562 | MsG0380017061.01.T01:three_prime_UTR | 40.0% |
| ! | CCCCAAAGTTTAGCTTCTTT+GGG | - | Chr3:91449917-91449936 | None:intergenic | 40.0% |
| ! | GGATCAGGATTCTTTTTCTG+AGG | - | Chr3:91451311-91451330 | None:intergenic | 40.0% |
| ! | GGTACTGGGTTACATTAACA+GGG | - | Chr3:91451858-91451877 | None:intergenic | 40.0% |
| ! | TGCTTACAATCGTGATTTGC+AGG | + | Chr3:91451412-91451431 | MsG0380017061.01.T01:CDS | 40.0% |
| ! | TTTGGGTTTAGCAGCATTGT+TGG | - | Chr3:91449900-91449919 | None:intergenic | 40.0% |
| !! | AAGAGTATCCTAGTTGTCAC+TGG | + | Chr3:91452542-91452561 | MsG0380017061.01.T01:exon | 40.0% |
| !! | AAGCTGGCTTTGAACAATCA+CGG | + | Chr3:91450414-91450433 | MsG0380017061.01.T01:CDS | 40.0% |
| !! | AATCACGGTCTTATTGTTCC+TGG | + | Chr3:91450429-91450448 | MsG0380017061.01.T01:CDS | 40.0% |
| !! | AGTTGTTAAGGTGGTGGAAA+GGG | - | Chr3:91449819-91449838 | None:intergenic | 40.0% |
| !! | CATCCAATAATCGAGTTGGT+CGG | - | Chr3:91452502-91452521 | None:intergenic | 40.0% |
| !! | GCTGCTCTTACTGATTTGAT+TGG | + | Chr3:91450261-91450280 | MsG0380017061.01.T01:CDS | 40.0% |
| !! | TTCTCGACTTGGTGAAGAAT+GGG | + | Chr3:91451214-91451233 | MsG0380017061.01.T01:CDS | 40.0% |
| !! | TTTCTCGACTTGGTGAAGAA+TGG | + | Chr3:91451213-91451232 | MsG0380017061.01.T01:CDS | 40.0% |
| !!! | GGTTGCTTTTGGTTGTAAGT+AGG | + | Chr3:91451552-91451571 | MsG0380017061.01.T01:intron | 40.0% |
| AACTGCAGAGAAAACACGCA+AGG | - | Chr3:91451476-91451495 | None:intergenic | 45.0% | |
| ATACAAAAGGCTTTACCGGC+TGG | + | Chr3:91451673-91451692 | MsG0380017061.01.T01:CDS | 45.0% | |
| ATCACGCTCAATCTGCAAGA+GGG | - | Chr3:91450854-91450873 | None:intergenic | 45.0% | |
| CCAAGCGATTCTGTTTCAAC+AGG | + | Chr3:91451272-91451291 | MsG0380017061.01.T01:CDS | 45.0% | |
| CCGGTTTATTCATTCGCTTG+TGG | + | Chr3:91450788-91450807 | MsG0380017061.01.T01:intron | 45.0% | |
| CCTGTTGAAACAGAATCGCT+TGG | - | Chr3:91451275-91451294 | None:intergenic | 45.0% | |
| CGAACAAGTTCCATTGGATC+AGG | - | Chr3:91451326-91451345 | None:intergenic | 45.0% | |
| CGCTGCAAATGAGTATAACC+AGG | - | Chr3:91450450-91450469 | None:intergenic | 45.0% | |
| GAGAGCTGAAGAGAAAACCA+TGG | - | Chr3:91449756-91449775 | None:intergenic | 45.0% | |
| GAGTATCCTAGTTGTCACTG+GGG | + | Chr3:91452544-91452563 | MsG0380017061.01.T01:three_prime_UTR | 45.0% | |
| GTAAGTCTGCCAGAGTCATA+GGG | + | Chr3:91451348-91451367 | MsG0380017061.01.T01:CDS | 45.0% | |
| GTTGCATCAAGATAACCAGC+CGG | - | Chr3:91451691-91451710 | None:intergenic | 45.0% | |
| GTTTGATCAGTGCGAGTGAT+AGG | + | Chr3:91450139-91450158 | MsG0380017061.01.T01:CDS | 45.0% | |
| TAAGTCTGCCAGAGTCATAG+GGG | + | Chr3:91451349-91451368 | MsG0380017061.01.T01:CDS | 45.0% | |
| TATCTGAACTTGGACAGTGG+CGG | - | Chr3:91451819-91451838 | None:intergenic | 45.0% | |
| TGGGATTTACTGCTCCAATG+AGG | + | Chr3:91450983-91451002 | MsG0380017061.01.T01:CDS | 45.0% | |
| TTCTGACCGAGATTTCCTAC+TGG | + | Chr3:91451154-91451173 | MsG0380017061.01.T01:CDS | 45.0% | |
| TTGATCCATGTAGTTGGACC+TGG | + | Chr3:91451037-91451056 | MsG0380017061.01.T01:intron | 45.0% | |
| TTGCCGACCAACTCGATTAT+TGG | + | Chr3:91452496-91452515 | MsG0380017061.01.T01:CDS | 45.0% | |
| TTTGCGGTTAGTGAAAGTGG+AGG | - | Chr3:91449846-91449865 | None:intergenic | 45.0% | |
| ! | AGTGGAGGATCGAGTTGTTA+AGG | - | Chr3:91449831-91449850 | None:intergenic | 45.0% |
| ! | CGGTACTGGGTTACATTAAC+AGG | - | Chr3:91451859-91451878 | None:intergenic | 45.0% |
| ! | GATCCAATGGAACTTGTTCG+TGG | + | Chr3:91451326-91451345 | MsG0380017061.01.T01:CDS | 45.0% |
| ! | TGGTGAAGAATGGGTACTGT+GGG | + | Chr3:91451223-91451242 | MsG0380017061.01.T01:CDS | 45.0% |
| ! | TTGGTGAAGAATGGGTACTG+TGG | + | Chr3:91451222-91451241 | MsG0380017061.01.T01:CDS | 45.0% |
| !! | AGCAGCATTGTTGGTGGTTT+GGG | - | Chr3:91449891-91449910 | None:intergenic | 45.0% |
| !! | GAGTTGTTAAGGTGGTGGAA+AGG | - | Chr3:91449820-91449839 | None:intergenic | 45.0% |
| !! | TAGCAGCATTGTTGGTGGTT+TGG | - | Chr3:91449892-91449911 | None:intergenic | 45.0% |
| AAGTCTGCCAGAGTCATAGG+GGG | + | Chr3:91451350-91451369 | MsG0380017061.01.T01:CDS | 50.0% | |
| AGTGAATCGTTCAACGGCGT+CGG | - | Chr3:91449963-91449982 | None:intergenic | 50.0% | |
| ATCTGAACTTGGACAGTGGC+GGG | - | Chr3:91451818-91451837 | None:intergenic | 50.0% | |
| CATCACGCTCAATCTGCAAG+AGG | - | Chr3:91450855-91450874 | None:intergenic | 50.0% | |
| CATGTAGTTGGACCTGGCAT+GGG | + | Chr3:91451043-91451062 | MsG0380017061.01.T01:intron | 50.0% | |
| CCATGCTCGCTAAACAGGTT+AGG | + | Chr3:91450047-91450066 | MsG0380017061.01.T01:intron | 50.0% | |
| CCTAACCTGTTTAGCGAGCA+TGG | - | Chr3:91450050-91450069 | None:intergenic | 50.0% | |
| CTGTGGGCTTCAGAGGAATT+TGG | + | Chr3:91451239-91451258 | MsG0380017061.01.T01:CDS | 50.0% | |
| GCAAGAAGCTCACGACTTCA+AGG | - | Chr3:91452730-91452749 | None:intergenic | 50.0% | |
| GGGTTTAGCAGCATTGTTGG+TGG | - | Chr3:91449897-91449916 | None:intergenic | 50.0% | |
| GGTAAGTCTGCCAGAGTCAT+AGG | + | Chr3:91451347-91451366 | MsG0380017061.01.T01:CDS | 50.0% | |
| TCACGCTCAATCTGCAAGAG+GGG | - | Chr3:91450853-91450872 | None:intergenic | 50.0% | |
| TGCATCCATGCTCGCTAAAC+AGG | + | Chr3:91450042-91450061 | MsG0380017061.01.T01:CDS | 50.0% | |
| TGGGGTGGTAGATTCGAAGA+AGG | + | Chr3:91449932-91449951 | MsG0380017061.01.T01:CDS | 50.0% | |
| TTGCAGATTGAGCGTGATGC+TGG | + | Chr3:91450856-91450875 | MsG0380017061.01.T01:intron | 50.0% | |
| ! | AGAAAGGTGCACTGCTGTGA+TGG | - | Chr3:91451198-91451217 | None:intergenic | 50.0% |
| ! | GGAGGATCGAGTTGTTAAGG+TGG | - | Chr3:91449828-91449847 | None:intergenic | 50.0% |
| ! | GGATCGAGTTGTTAAGGTGG+TGG | - | Chr3:91449825-91449844 | None:intergenic | 50.0% |
| ! | TGGTGGTTTGGGCTTGCATT+CGG | - | Chr3:91449880-91449899 | None:intergenic | 50.0% |
| !! | TAAGGTGGTGGAAAGGGAGT+GGG | - | Chr3:91449813-91449832 | None:intergenic | 50.0% |
| !! | TTAAGGTGGTGGAAAGGGAG+TGG | - | Chr3:91449814-91449833 | None:intergenic | 50.0% |
| CAGCTTCCCCAGTGACAACT+AGG | - | Chr3:91452553-91452572 | None:intergenic | 55.0% | |
| CCATGCCAGGTCCAACTACA+TGG | - | Chr3:91451045-91451064 | None:intergenic | 55.0% | |
| CCATGTAGTTGGACCTGGCA+TGG | + | Chr3:91451042-91451061 | MsG0380017061.01.T01:intron | 55.0% | |
| GACCAAACCCCCTATGACTC+TGG | - | Chr3:91451360-91451379 | None:intergenic | 55.0% | |
| GCAGTGCACCTTTCTCGACT+TGG | + | Chr3:91451203-91451222 | MsG0380017061.01.T01:CDS | 55.0% | |
| TGCCAGAGTCATAGGGGGTT+TGG | + | Chr3:91451355-91451374 | MsG0380017061.01.T01:CDS | 55.0% | |
| TGGTGGAAAGGGAGTGGGTA+CGG | - | Chr3:91449808-91449827 | None:intergenic | 55.0% | |
| TTACAAGGGCAGCCGGTACT+GGG | - | Chr3:91451872-91451891 | None:intergenic | 55.0% | |
| TTTACAAGGGCAGCCGGTAC+TGG | - | Chr3:91451873-91451892 | None:intergenic | 55.0% | |
| ! | ATGGGTACTGTGGGCTTCAG+AGG | + | Chr3:91451232-91451251 | MsG0380017061.01.T01:CDS | 55.0% |
| ! | GGTGGTTTGGGCTTGCATTC+GGG | - | Chr3:91449879-91449898 | None:intergenic | 55.0% |
| ! | TCCTTTAGGGGCTTGTGCGT+TGG | + | Chr3:91450915-91450934 | MsG0380017061.01.T01:CDS | 55.0% |
| !! | CTTGTGCGTTGGCTGGTACA+GGG | + | Chr3:91450926-91450945 | MsG0380017061.01.T01:CDS | 55.0% |
| GAAAGGGAGTGGGTACGGAG+TGG | - | Chr3:91449803-91449822 | None:intergenic | 60.0% | |
| GAGTGGGTACGGAGTGGAGA+GGG | - | Chr3:91449797-91449816 | None:intergenic | 60.0% | |
| GCCAACGCACAAGCCCCTAA+AGG | - | Chr3:91450919-91450938 | None:intergenic | 60.0% | |
| GTCGGCAACACAAGCAGACC+CGG | - | Chr3:91452484-91452503 | None:intergenic | 60.0% | |
| ! | TTAGGGGCTTGTGCGTTGGC+TGG | + | Chr3:91450919-91450938 | MsG0380017061.01.T01:CDS | 60.0% |
| !! | GCTTGTGCGTTGGCTGGTAC+AGG | + | Chr3:91450925-91450944 | MsG0380017061.01.T01:CDS | 60.0% |
| GGAGTGGGTACGGAGTGGAG+AGG | - | Chr3:91449798-91449817 | None:intergenic | 65.0% | |
| GGCAACACAAGCAGACCCGG+TGG | - | Chr3:91452481-91452500 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 91449711 | 91452863 | 91449711 | ID=MsG0380017061.01;Name=MsG0380017061.01 |
| Chr3 | mRNA | 91449711 | 91452863 | 91449711 | ID=MsG0380017061.01.T01;Parent=MsG0380017061.01;Name=MsG0380017061.01.T01;_AED=0.28;_eAED=0.28;_QI=44|1|1|1|1|1|6|321|514 |
| Chr3 | exon | 91449711 | 91450063 | 91449711 | ID=MsG0380017061.01.T01:exon:25397;Parent=MsG0380017061.01.T01 |
| Chr3 | exon | 91450138 | 91450518 | 91450138 | ID=MsG0380017061.01.T01:exon:25398;Parent=MsG0380017061.01.T01 |
| Chr3 | exon | 91450862 | 91451010 | 91450862 | ID=MsG0380017061.01.T01:exon:25399;Parent=MsG0380017061.01.T01 |
| Chr3 | exon | 91451142 | 91451433 | 91451142 | ID=MsG0380017061.01.T01:exon:25400;Parent=MsG0380017061.01.T01 |
| Chr3 | exon | 91451574 | 91451738 | 91451574 | ID=MsG0380017061.01.T01:exon:25401;Parent=MsG0380017061.01.T01 |
| Chr3 | exon | 91452294 | 91452863 | 91452294 | ID=MsG0380017061.01.T01:exon:25402;Parent=MsG0380017061.01.T01 |
| Chr3 | five_prime_UTR | 91449711 | 91449754 | 91449711 | ID=MsG0380017061.01.T01:five_prime_utr;Parent=MsG0380017061.01.T01 |
| Chr3 | CDS | 91449755 | 91450063 | 91449755 | ID=MsG0380017061.01.T01:cds;Parent=MsG0380017061.01.T01 |
| Chr3 | CDS | 91450138 | 91450518 | 91450138 | ID=MsG0380017061.01.T01:cds;Parent=MsG0380017061.01.T01 |
| Chr3 | CDS | 91450862 | 91451010 | 91450862 | ID=MsG0380017061.01.T01:cds;Parent=MsG0380017061.01.T01 |
| Chr3 | CDS | 91451142 | 91451433 | 91451142 | ID=MsG0380017061.01.T01:cds;Parent=MsG0380017061.01.T01 |
| Chr3 | CDS | 91451574 | 91451738 | 91451574 | ID=MsG0380017061.01.T01:cds;Parent=MsG0380017061.01.T01 |
| Chr3 | CDS | 91452294 | 91452542 | 91452294 | ID=MsG0380017061.01.T01:cds;Parent=MsG0380017061.01.T01 |
| Chr3 | three_prime_UTR | 91452543 | 91452863 | 91452543 | ID=MsG0380017061.01.T01:three_prime_utr;Parent=MsG0380017061.01.T01 |
| Gene Sequence |
| Protein sequence |
