Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007934.01.T01 | XP_013463163.1 | 98.361 | 183 | 3 | 0 | 16 | 198 | 1 | 183 | 6.62E-134 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007934.01.T01 | P33154 | 57.595 | 158 | 64 | 2 | 22 | 179 | 7 | 161 | 1.62E-67 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007934.01.T01 | I3SBC6 | 98.361 | 183 | 3 | 0 | 16 | 198 | 1 | 183 | 3.16e-134 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001800.01 | MsG0280007934.01 | 0.802170 | 6.369120e-49 | 3.098680e-46 |
| MsG0280007934.01 | MsG0280010936.01 | 0.826931 | 2.068431e-54 | 1.967627e-51 |
| MsG0280007934.01 | MsG0380016299.01 | 0.808509 | 2.990806e-50 | 1.713250e-47 |
| MsG0280007934.01 | MsG0480019348.01 | 0.805379 | 1.373331e-49 | 7.254651e-47 |
| MsG0280007934.01 | MsG0480021133.01 | 0.800455 | 1.429440e-48 | 6.658736e-46 |
| MsG0280007934.01 | MsG0580024087.01 | 0.804969 | 1.673297e-49 | 8.746869e-47 |
| MsG0280007934.01 | MsG0580027753.01 | 0.812327 | 4.483024e-51 | 2.841978e-48 |
| MsG0280007934.01 | MsG0580029938.01 | 0.821265 | 4.425870e-53 | 3.583179e-50 |
| MsG0280007934.01 | MsG0780036649.01 | 0.810485 | 1.126013e-50 | 6.795847e-48 |
| MsG0280007934.01 | MsG0780036839.01 | 0.811843 | 5.715505e-51 | 3.575981e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0280007934.01 | MsG0480022571.01 | PPI |
| MsG0280007934.01 | MsG0280006554.01 | PPI |
| MsG0280007934.01 | MsG0280006552.01 | PPI |
| MsG0280007934.01 | MsG0380017755.01 | PPI |
| MsG0280007934.01 | MsG0280006553.01 | PPI |
| MsG0280007934.01 | MsG0280006550.01 | PPI |
| MsG0280007934.01 | MsG0880047503.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007934.01.T01 | MTR_2g435490 | 98.361 | 183 | 3 | 0 | 16 | 198 | 1 | 183 | 8.02e-138 | 382 |
| MsG0280007934.01.T01 | MTR_4g050762 | 58.599 | 157 | 60 | 2 | 35 | 189 | 16 | 169 | 2.89e-66 | 201 |
| MsG0280007934.01.T01 | MTR_2g012370 | 58.599 | 157 | 60 | 2 | 35 | 189 | 16 | 169 | 2.89e-66 | 201 |
| MsG0280007934.01.T01 | MTR_2g010600 | 56.962 | 158 | 65 | 2 | 24 | 179 | 6 | 162 | 7.52e-66 | 200 |
| MsG0280007934.01.T01 | MTR_2g010590 | 53.750 | 160 | 73 | 1 | 20 | 179 | 1 | 159 | 2.39e-62 | 191 |
| MsG0280007934.01.T01 | MTR_2g010580 | 51.572 | 159 | 73 | 3 | 23 | 179 | 8 | 164 | 2.02e-57 | 178 |
| MsG0280007934.01.T01 | MTR_2g010630 | 55.844 | 154 | 60 | 4 | 32 | 179 | 14 | 165 | 5.80e-57 | 177 |
| MsG0280007934.01.T01 | MTR_2g010650 | 54.118 | 170 | 67 | 7 | 16 | 179 | 1 | 165 | 8.68e-56 | 174 |
| MsG0280007934.01.T01 | MTR_2g010610 | 50.345 | 145 | 50 | 2 | 35 | 179 | 16 | 138 | 9.41e-50 | 158 |
| MsG0280007934.01.T01 | MTR_4g092540 | 45.912 | 159 | 82 | 4 | 22 | 179 | 4 | 159 | 1.45e-48 | 155 |
| MsG0280007934.01.T01 | MTR_4g128750 | 49.650 | 143 | 70 | 2 | 39 | 179 | 31 | 173 | 2.55e-46 | 150 |
| MsG0280007934.01.T01 | MTR_2g010700 | 46.341 | 164 | 77 | 5 | 25 | 179 | 7 | 168 | 6.16e-46 | 149 |
| MsG0280007934.01.T01 | MTR_2g010640 | 46.584 | 161 | 78 | 5 | 24 | 179 | 6 | 163 | 1.94e-44 | 145 |
| MsG0280007934.01.T01 | MTR_2g010690 | 44.444 | 162 | 81 | 5 | 24 | 179 | 6 | 164 | 1.16e-40 | 136 |
| MsG0280007934.01.T01 | MTR_2g010670 | 45.062 | 162 | 80 | 5 | 24 | 179 | 6 | 164 | 2.09e-39 | 132 |
| MsG0280007934.01.T01 | MTR_4g128770 | 44.203 | 138 | 71 | 3 | 47 | 179 | 70 | 206 | 3.55e-38 | 130 |
| MsG0280007934.01.T01 | MTR_8g078770 | 37.143 | 140 | 84 | 3 | 44 | 179 | 33 | 172 | 1.28e-32 | 115 |
| MsG0280007934.01.T01 | MTR_1g067290 | 38.235 | 136 | 81 | 3 | 47 | 179 | 73 | 208 | 6.34e-31 | 112 |
| MsG0280007934.01.T01 | MTR_5g018770 | 37.857 | 140 | 81 | 4 | 46 | 179 | 46 | 185 | 7.86e-31 | 111 |
| MsG0280007934.01.T01 | MTR_4g092515 | 51.136 | 88 | 42 | 1 | 24 | 110 | 9 | 96 | 3.72e-23 | 90.1 |
| MsG0280007934.01.T01 | MTR_5g018755 | 35.165 | 91 | 54 | 4 | 94 | 179 | 13 | 103 | 5.27e-12 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007934.01.T01 | AT2G14610 | 57.595 | 158 | 64 | 2 | 22 | 179 | 7 | 161 | 1.66e-68 | 206 |
| MsG0280007934.01.T01 | AT4G33720 | 56.688 | 157 | 66 | 2 | 23 | 179 | 9 | 163 | 1.87e-67 | 204 |
| MsG0280007934.01.T01 | AT2G14580 | 58.228 | 158 | 63 | 2 | 22 | 179 | 7 | 161 | 1.96e-67 | 204 |
| MsG0280007934.01.T01 | AT3G19690 | 51.220 | 164 | 74 | 3 | 18 | 179 | 2 | 161 | 7.93e-58 | 179 |
| MsG0280007934.01.T01 | AT4G33710 | 55.319 | 141 | 60 | 2 | 41 | 179 | 27 | 166 | 4.59e-53 | 167 |
| MsG0280007934.01.T01 | AT5G26130 | 50.633 | 158 | 74 | 3 | 24 | 179 | 11 | 166 | 2.09e-52 | 166 |
| MsG0280007934.01.T01 | AT4G33730 | 51.282 | 156 | 73 | 3 | 25 | 179 | 19 | 172 | 3.17e-52 | 166 |
| MsG0280007934.01.T01 | AT2G19990 | 53.333 | 135 | 63 | 0 | 45 | 179 | 42 | 176 | 3.70e-52 | 166 |
| MsG0280007934.01.T01 | AT4G25790 | 49.630 | 135 | 67 | 1 | 46 | 179 | 76 | 210 | 3.85e-49 | 159 |
| MsG0280007934.01.T01 | AT1G50060 | 50.000 | 154 | 75 | 2 | 27 | 179 | 9 | 161 | 2.44e-48 | 155 |
| MsG0280007934.01.T01 | AT5G57625 | 50.376 | 133 | 65 | 1 | 48 | 179 | 75 | 207 | 1.93e-47 | 154 |
| MsG0280007934.01.T01 | AT4G30320 | 43.709 | 151 | 80 | 3 | 30 | 179 | 15 | 161 | 7.34e-45 | 146 |
| MsG0280007934.01.T01 | AT3G09590 | 40.764 | 157 | 91 | 1 | 25 | 179 | 30 | 186 | 1.65e-43 | 144 |
| MsG0280007934.01.T01 | AT1G50050 | 47.742 | 155 | 78 | 3 | 27 | 179 | 9 | 162 | 2.04e-41 | 138 |
| MsG0280007934.01.T01 | AT1G01310 | 41.830 | 153 | 74 | 3 | 47 | 198 | 87 | 225 | 1.19e-40 | 138 |
| MsG0280007934.01.T01 | AT4G31470 | 44.444 | 135 | 73 | 2 | 46 | 179 | 52 | 185 | 2.21e-38 | 130 |
| MsG0280007934.01.T01 | AT4G25780 | 43.066 | 137 | 72 | 4 | 48 | 179 | 55 | 190 | 4.18e-37 | 127 |
| MsG0280007934.01.T01 | AT1G50050 | 47.586 | 145 | 73 | 3 | 27 | 169 | 9 | 152 | 4.62e-37 | 129 |
| MsG0280007934.01.T01 | AT5G02730 | 39.583 | 144 | 85 | 1 | 47 | 188 | 59 | 202 | 2.43e-36 | 126 |
| MsG0280007934.01.T01 | AT4G07820 | 42.446 | 139 | 77 | 3 | 41 | 179 | 25 | 160 | 7.98e-35 | 121 |
| MsG0280007934.01.T01 | AT5G66590 | 39.286 | 140 | 78 | 3 | 46 | 179 | 47 | 185 | 1.19e-30 | 111 |
| MsG0280007934.01.T01 | AT2G19970 | 40.299 | 134 | 69 | 5 | 45 | 169 | 35 | 166 | 5.22e-26 | 99.0 |
| MsG0280007934.01.T01 | AT2G19980 | 35.542 | 166 | 84 | 8 | 27 | 179 | 10 | 165 | 1.84e-22 | 89.4 |
Find 45 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTATACTCAGGTTGTT+TGG | 0.338106 | 2:+23247767 | MsG0280007934.01.T01:CDS |
| GAAGGAGATGTGAGATCATT+GGG | 0.354867 | 2:-23247417 | None:intergenic |
| ATTAAAAGCAAACTGCAAAA+TGG | 0.363614 | 2:+23247603 | MsG0280007934.01.T01:CDS |
| GATCCACCTGGTAATTATAT+TGG | 0.367528 | 2:+23247865 | MsG0280007934.01.T01:CDS |
| TTGTTTGGCGCGATTCGGTT+CGG | 0.384031 | 2:+23247782 | MsG0280007934.01.T01:CDS |
| TCCCATGTTGAGAAAAGCTT+TGG | 0.385556 | 2:-23247392 | None:intergenic |
| TTGGTGTTGGCCCAATATCT+TGG | 0.387017 | 2:+23247539 | MsG0280007934.01.T01:CDS |
| TGTTTGGCGCGATTCGGTTC+GGG | 0.388041 | 2:+23247783 | MsG0280007934.01.T01:CDS |
| TCAGGTTGTTTGGCGCGATT+CGG | 0.394956 | 2:+23247777 | MsG0280007934.01.T01:CDS |
| ATCATAGTTACAACTAATAA+TGG | 0.408982 | 2:-23247845 | None:intergenic |
| GGAAGGAGATGTGAGATCAT+TGG | 0.420420 | 2:-23247418 | None:intergenic |
| AAGCTCAATGGCACTTCAAA+AGG | 0.430809 | 2:-23247910 | None:intergenic |
| TGGTGTTGGCCCAATATCTT+GGG | 0.465713 | 2:+23247540 | MsG0280007934.01.T01:CDS |
| GTACACTCCAAGGGTCCATA+TGG | 0.472690 | 2:+23247625 | MsG0280007934.01.T01:CDS |
| AACAAAGCACGCTCTGACGT+TGG | 0.488151 | 2:+23247520 | MsG0280007934.01.T01:CDS |
| TCAAAAGGACTAATATCAAA+AGG | 0.488505 | 2:-23247895 | None:intergenic |
| AACAGTAATTCATGTGCTGT+TGG | 0.492187 | 2:+23247733 | MsG0280007934.01.T01:CDS |
| CTCACATCTCCTTCCACTCA+TGG | 0.495622 | 2:+23247426 | MsG0280007934.01.T01:CDS |
| CTACCATGGTTGAAGCTCAA+TGG | 0.504277 | 2:-23247922 | None:intergenic |
| CTGCAAAATGGTACACTCCA+AGG | 0.542543 | 2:+23247615 | MsG0280007934.01.T01:CDS |
| GCACGCTCTGACGTTGGTGT+TGG | 0.542698 | 2:+23247526 | MsG0280007934.01.T01:CDS |
| CTTTGACCAATATAATTACC+AGG | 0.549756 | 2:-23247871 | None:intergenic |
| ACAAGATAGCCATGAGTGGA+AGG | 0.552738 | 2:-23247435 | None:intergenic |
| TGGCGCGATTCGGTTCGGGT+TGG | 0.564234 | 2:+23247787 | MsG0280007934.01.T01:CDS |
| TGGAGCAGTGGTGACATGAC+AGG | 0.569134 | 2:+23247661 | MsG0280007934.01.T01:CDS |
| GGTTCGGGTTGGATGTGCTA+AGG | 0.572627 | 2:+23247798 | MsG0280007934.01.T01:CDS |
| GCTGCTGTTACCATGTGGAT+TGG | 0.573532 | 2:+23247688 | MsG0280007934.01.T01:CDS |
| CTGGTAATTATATTGGTCAA+AGG | 0.577693 | 2:+23247872 | MsG0280007934.01.T01:CDS |
| GTTTACATAGGTTTGTGCAT+AGG | 0.587350 | 2:-23247578 | None:intergenic |
| GAAAATTTAGCATGGAGCAG+TGG | 0.597306 | 2:+23247649 | MsG0280007934.01.T01:CDS |
| GCTAAGGTAAAATGTAATGA+TGG | 0.604315 | 2:+23247814 | MsG0280007934.01.T01:CDS |
| TGAATCTTGATGTAGTCTTG+TGG | 0.606016 | 2:-23247496 | None:intergenic |
| TGCAAAATGGTACACTCCAA+GGG | 0.616230 | 2:+23247616 | MsG0280007934.01.T01:CDS |
| CATATGGAGAAAATTTAGCA+TGG | 0.617244 | 2:+23247641 | MsG0280007934.01.T01:CDS |
| ACTTGTCATCAAAACTACCA+TGG | 0.632716 | 2:-23247936 | None:intergenic |
| TGTGCTGTTGGTTATCAGTG+TGG | 0.633545 | 2:+23247745 | MsG0280007934.01.T01:CDS |
| GTGCCATTGAGCTTCAACCA+TGG | 0.637543 | 2:+23247919 | MsG0280007934.01.T01:CDS |
| AAATGAGATTTGTGTTAGTG+TGG | 0.643782 | 2:-23247461 | None:intergenic |
| TCAGTGTGGACATTATACTC+AGG | 0.656601 | 2:+23247759 | MsG0280007934.01.T01:CDS |
| TTTCTTCTCTCCAATCCACA+TGG | 0.658038 | 2:-23247698 | None:intergenic |
| AGTTGTAACTATGATCCACC+TGG | 0.667304 | 2:+23247853 | MsG0280007934.01.T01:CDS |
| GCTAACAAGATAGCCATGAG+TGG | 0.671580 | 2:-23247439 | None:intergenic |
| GAACAGCTGCTGTTACCATG+TGG | 0.688628 | 2:+23247683 | MsG0280007934.01.T01:CDS |
| TGACCAATATAATTACCAGG+TGG | 0.723440 | 2:-23247868 | None:intergenic |
| AAGGAGATGTGAGATCATTG+GGG | 0.724704 | 2:-23247416 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATAGTTACAACTAATAA+TGG | - | Chr2:23247848-23247867 | None:intergenic | 20.0% |
| !!! | TGCTTTTAATTTGTTTACAT+AGG | - | Chr2:23247593-23247612 | None:intergenic | 20.0% |
| ! | ATTAAAAGCAAACTGCAAAA+TGG | + | Chr2:23247603-23247622 | MsG0280007934.01.T01:CDS | 25.0% |
| ! | TCAAAAGGACTAATATCAAA+AGG | - | Chr2:23247898-23247917 | None:intergenic | 25.0% |
| AAATGAGATTTGTGTTAGTG+TGG | - | Chr2:23247464-23247483 | None:intergenic | 30.0% | |
| CATATGGAGAAAATTTAGCA+TGG | + | Chr2:23247641-23247660 | MsG0280007934.01.T01:CDS | 30.0% | |
| CTGGTAATTATATTGGTCAA+AGG | + | Chr2:23247872-23247891 | MsG0280007934.01.T01:CDS | 30.0% | |
| CTTTGACCAATATAATTACC+AGG | - | Chr2:23247874-23247893 | None:intergenic | 30.0% | |
| GCTAAGGTAAAATGTAATGA+TGG | + | Chr2:23247814-23247833 | MsG0280007934.01.T01:CDS | 30.0% | |
| ! | CATGCTAAATTTTCTCCATA+TGG | - | Chr2:23247643-23247662 | None:intergenic | 30.0% |
| !!! | AAAGCTTTGGTTTTGATAGA+TGG | - | Chr2:23247382-23247401 | None:intergenic | 30.0% |
| AACAGTAATTCATGTGCTGT+TGG | + | Chr2:23247733-23247752 | MsG0280007934.01.T01:CDS | 35.0% | |
| ACTTGTCATCAAAACTACCA+TGG | - | Chr2:23247939-23247958 | None:intergenic | 35.0% | |
| GATCCACCTGGTAATTATAT+TGG | + | Chr2:23247865-23247884 | MsG0280007934.01.T01:CDS | 35.0% | |
| GTTTACATAGGTTTGTGCAT+AGG | - | Chr2:23247581-23247600 | None:intergenic | 35.0% | |
| TGACCAATATAATTACCAGG+TGG | - | Chr2:23247871-23247890 | None:intergenic | 35.0% | |
| ! | AACCAAAGCTTTTCTCAACA+TGG | + | Chr2:23247390-23247409 | MsG0280007934.01.T01:CDS | 35.0% |
| ! | ACCAAAGCTTTTCTCAACAT+GGG | + | Chr2:23247391-23247410 | MsG0280007934.01.T01:CDS | 35.0% |
| ! | ACTTTTGCATCCCAAGATAT+TGG | - | Chr2:23247553-23247572 | None:intergenic | 35.0% |
| ! | CTTTTGCATCCCAAGATATT+GGG | - | Chr2:23247552-23247571 | None:intergenic | 35.0% |
| ! | GACATTATACTCAGGTTGTT+TGG | + | Chr2:23247767-23247786 | MsG0280007934.01.T01:CDS | 35.0% |
| ! | TGAATCTTGATGTAGTCTTG+TGG | - | Chr2:23247499-23247518 | None:intergenic | 35.0% |
| AAGCTCAATGGCACTTCAAA+AGG | - | Chr2:23247913-23247932 | None:intergenic | 40.0% | |
| AAGGAGATGTGAGATCATTG+GGG | - | Chr2:23247419-23247438 | None:intergenic | 40.0% | |
| AGTTGTAACTATGATCCACC+TGG | + | Chr2:23247853-23247872 | MsG0280007934.01.T01:CDS | 40.0% | |
| GAAAATTTAGCATGGAGCAG+TGG | + | Chr2:23247649-23247668 | MsG0280007934.01.T01:CDS | 40.0% | |
| GAAGGAGATGTGAGATCATT+GGG | - | Chr2:23247420-23247439 | None:intergenic | 40.0% | |
| TCAGTGTGGACATTATACTC+AGG | + | Chr2:23247759-23247778 | MsG0280007934.01.T01:CDS | 40.0% | |
| TCCCATGTTGAGAAAAGCTT+TGG | - | Chr2:23247395-23247414 | None:intergenic | 40.0% | |
| TGCAAAATGGTACACTCCAA+GGG | + | Chr2:23247616-23247635 | MsG0280007934.01.T01:CDS | 40.0% | |
| TTTCTTCTCTCCAATCCACA+TGG | - | Chr2:23247701-23247720 | None:intergenic | 40.0% | |
| ! | ATTTTCTCCATATGGACCCT+TGG | - | Chr2:23247635-23247654 | None:intergenic | 40.0% |
| !!! | TGGTTTTGATAGATGGTGCT+TGG | - | Chr2:23247375-23247394 | None:intergenic | 40.0% |
| ACAAGATAGCCATGAGTGGA+AGG | - | Chr2:23247438-23247457 | None:intergenic | 45.0% | |
| CTACCATGGTTGAAGCTCAA+TGG | - | Chr2:23247925-23247944 | None:intergenic | 45.0% | |
| CTGCAAAATGGTACACTCCA+AGG | + | Chr2:23247615-23247634 | MsG0280007934.01.T01:CDS | 45.0% | |
| GCTAACAAGATAGCCATGAG+TGG | - | Chr2:23247442-23247461 | None:intergenic | 45.0% | |
| GGAAGGAGATGTGAGATCAT+TGG | - | Chr2:23247421-23247440 | None:intergenic | 45.0% | |
| ! | TGTGCTGTTGGTTATCAGTG+TGG | + | Chr2:23247745-23247764 | MsG0280007934.01.T01:CDS | 45.0% |
| !! | TGGTGTTGGCCCAATATCTT+GGG | + | Chr2:23247540-23247559 | MsG0280007934.01.T01:CDS | 45.0% |
| !! | TTGGTGTTGGCCCAATATCT+TGG | + | Chr2:23247539-23247558 | MsG0280007934.01.T01:CDS | 45.0% |
| AACAAAGCACGCTCTGACGT+TGG | + | Chr2:23247520-23247539 | MsG0280007934.01.T01:CDS | 50.0% | |
| CTCACATCTCCTTCCACTCA+TGG | + | Chr2:23247426-23247445 | MsG0280007934.01.T01:CDS | 50.0% | |
| GAACAGCTGCTGTTACCATG+TGG | + | Chr2:23247683-23247702 | MsG0280007934.01.T01:CDS | 50.0% | |
| GCTGCTGTTACCATGTGGAT+TGG | + | Chr2:23247688-23247707 | MsG0280007934.01.T01:CDS | 50.0% | |
| GTACACTCCAAGGGTCCATA+TGG | + | Chr2:23247625-23247644 | MsG0280007934.01.T01:CDS | 50.0% | |
| ! | GTGCCATTGAGCTTCAACCA+TGG | + | Chr2:23247919-23247938 | MsG0280007934.01.T01:CDS | 50.0% |
| ! | TCAGGTTGTTTGGCGCGATT+CGG | + | Chr2:23247777-23247796 | MsG0280007934.01.T01:CDS | 50.0% |
| !! | TTGTTTGGCGCGATTCGGTT+CGG | + | Chr2:23247782-23247801 | MsG0280007934.01.T01:CDS | 50.0% |
| TGGAGCAGTGGTGACATGAC+AGG | + | Chr2:23247661-23247680 | MsG0280007934.01.T01:CDS | 55.0% | |
| !! | GGTTCGGGTTGGATGTGCTA+AGG | + | Chr2:23247798-23247817 | MsG0280007934.01.T01:CDS | 55.0% |
| !! | TGTTTGGCGCGATTCGGTTC+GGG | + | Chr2:23247783-23247802 | MsG0280007934.01.T01:CDS | 55.0% |
| GCACGCTCTGACGTTGGTGT+TGG | + | Chr2:23247526-23247545 | MsG0280007934.01.T01:CDS | 60.0% | |
| !! | TGGCGCGATTCGGTTCGGGT+TGG | + | Chr2:23247787-23247806 | MsG0280007934.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 23247364 | 23247960 | 23247364 | ID=MsG0280007934.01;Name=MsG0280007934.01 |
| Chr2 | mRNA | 23247364 | 23247960 | 23247364 | ID=MsG0280007934.01.T01;Parent=MsG0280007934.01;Name=MsG0280007934.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|198 |
| Chr2 | exon | 23247364 | 23247960 | 23247364 | ID=MsG0280007934.01.T01:exon:18433;Parent=MsG0280007934.01.T01 |
| Chr2 | CDS | 23247364 | 23247960 | 23247364 | ID=MsG0280007934.01.T01:cds;Parent=MsG0280007934.01.T01 |
| Gene Sequence |
| Protein sequence |
