AlfalfaGEDB | MsG0380016299.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016299.01

KEGG: -
GO: -
PFAM: PF00168

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016299.01.T01	XP_003601958.1	93.97	199	12	0	1	199	1	199	3.25E-137	392

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016299.01.T01	G7J3S4	93.970	199	12	0	1	199	1	199	1.55e-137	392

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048036.01	MsG0380016299.01	0.807082	6.013101e-50	3.318253e-47
MsG0080048134.01	MsG0380016299.01	0.875774	2.362929e-68	1.117275e-64
MsG0080048745.01	MsG0380016299.01	0.810455	1.143154e-50	6.893643e-48
MsG0080048887.01	MsG0380016299.01	-0.802861	4.588544e-49	2.272078e-46
MsG0080048889.01	MsG0380016299.01	0.814519	1.477993e-51	9.939550e-49
MsG0080048918.01	MsG0380016299.01	-0.809565	1.777357e-50	1.047084e-47
MsG0080049024.01	MsG0380016299.01	-0.801034	1.089070e-48	5.148621e-46
MsG0080049046.01	MsG0380016299.01	0.835880	1.296533e-56	1.606655e-53
MsG0080049066.01	MsG0380016299.01	-0.802531	5.368633e-49	2.635950e-46
MsG0080049154.01	MsG0380016299.01	0.801039	1.086605e-48	5.137579e-46
MsG0180000029.01	MsG0380016299.01	0.804665	1.937128e-49	1.004656e-46
MsG0180000040.01	MsG0380016299.01	-0.801848	7.417280e-49	3.579272e-46
MsG0180000147.01	MsG0380016299.01	0.804699	1.905849e-49	9.893009e-47
MsG0180000367.01	MsG0380016299.01	0.808146	3.574818e-50	2.028401e-47
MsG0180000386.01	MsG0380016299.01	0.801229	9.934154e-49	4.719303e-46
MsG0180000467.01	MsG0380016299.01	-0.808854	2.523466e-50	1.458649e-47
MsG0180000495.01	MsG0380016299.01	0.818373	2.027224e-52	1.514870e-49
MsG0180000551.01	MsG0380016299.01	0.819997	8.657361e-53	6.766987e-50
MsG0180000897.01	MsG0380016299.01	0.800388	1.475370e-48	6.861083e-46
MsG0180001008.01	MsG0380016299.01	0.864390	1.258561e-64	3.944966e-61
MsG0180001027.01	MsG0380016299.01	0.816619	5.036482e-52	3.586501e-49
MsG0180001029.01	MsG0380016299.01	0.847174	1.366331e-59	2.408269e-56
MsG0180001137.01	MsG0380016299.01	-0.810034	1.408931e-50	8.403802e-48
MsG0180001513.01	MsG0380016299.01	0.826000	3.448989e-54	3.194551e-51
MsG0180001515.01	MsG0380016299.01	0.805776	1.133601e-49	6.049963e-47
MsG0180001691.01	MsG0380016299.01	0.801672	8.062439e-49	3.873075e-46
MsG0180001797.01	MsG0380016299.01	0.842492	2.502469e-58	3.800795e-55
MsG0180001800.01	MsG0380016299.01	0.823402	1.412004e-53	1.214417e-50
MsG0180001907.01	MsG0380016299.01	-0.806430	8.256508e-50	4.480537e-47
MsG0180001915.01	MsG0380016299.01	0.837534	4.911207e-57	6.398655e-54
MsG0180002238.01	MsG0380016299.01	0.814764	1.305039e-51	8.833472e-49
MsG0180002255.01	MsG0380016299.01	0.843812	1.112937e-58	1.761772e-55
MsG0180002935.01	MsG0380016299.01	0.806723	7.160258e-50	3.914894e-47
MsG0180003235.01	MsG0380016299.01	0.811317	7.438269e-51	4.589422e-48
MsG0180003249.01	MsG0380016299.01	0.806400	8.379515e-50	4.543611e-47
MsG0180003250.01	MsG0380016299.01	0.802165	6.386691e-49	3.106815e-46
MsG0180003320.01	MsG0380016299.01	0.843485	1.361120e-58	2.132738e-55
MsG0180003322.01	MsG0380016299.01	0.818715	1.696107e-52	1.279323e-49
MsG0180003351.01	MsG0380016299.01	-0.806451	8.175975e-50	4.439222e-47
MsG0180003375.01	MsG0380016299.01	0.810986	8.775684e-51	5.368482e-48
MsG0180003404.01	MsG0380016299.01	0.802861	4.588296e-49	2.271962e-46
MsG0180003405.01	MsG0380016299.01	-0.813171	2.929764e-51	1.899277e-48
MsG0180003484.01	MsG0380016299.01	0.824719	6.932406e-54	6.191070e-51
MsG0180003758.01	MsG0380016299.01	-0.807373	5.216962e-50	2.900826e-47
MsG0180003980.01	MsG0380016299.01	-0.803944	2.737450e-49	1.393715e-46
MsG0180004059.01	MsG0380016299.01	0.803550	3.304682e-49	1.665540e-46
MsG0180004121.01	MsG0380016299.01	0.833834	4.246480e-56	4.949243e-53
MsG0180004232.01	MsG0380016299.01	0.859157	5.020765e-63	1.313198e-59
MsG0180004359.01	MsG0380016299.01	0.856304	3.521528e-62	8.366906e-59
MsG0180004502.01	MsG0380016299.01	-0.814561	1.447203e-51	9.743165e-49
MsG0180004549.01	MsG0380016299.01	0.824779	6.709922e-54	6.002465e-51
MsG0180004553.01	MsG0380016299.01	-0.821135	4.743227e-53	3.826640e-50
MsG0180004581.01	MsG0380016299.01	-0.800667	1.294628e-48	6.063258e-46
MsG0180004626.01	MsG0380016299.01	0.804942	1.695155e-49	8.855416e-47
MsG0180004787.01	MsG0380016299.01	-0.807685	4.480689e-50	2.511670e-47
MsG0180004792.01	MsG0380016299.01	-0.821515	3.875929e-53	3.159940e-50
MsG0180004830.01	MsG0380016299.01	0.811082	8.361896e-51	5.127785e-48
MsG0180004942.01	MsG0380016299.01	0.802134	6.480878e-49	3.150119e-46
MsG0180004965.01	MsG0380016299.01	0.804130	2.504417e-49	1.281085e-46
MsG0180005267.01	MsG0380016299.01	0.805828	1.105329e-49	5.906833e-47
MsG0180005281.01	MsG0380016299.01	0.820684	6.023211e-53	4.798153e-50
MsG0180005353.01	MsG0380016299.01	0.830599	2.682353e-55	2.839401e-52
MsG0180005571.01	MsG0380016299.01	0.831477	1.632380e-55	1.773570e-52
MsG0180005572.01	MsG0380016299.01	0.819314	1.239809e-52	9.506880e-50
MsG0180005681.01	MsG0380016299.01	0.809587	1.757989e-50	1.036315e-47
MsG0180006195.01	MsG0380016299.01	0.817293	3.555441e-52	2.578872e-49
MsG0280006381.01	MsG0380016299.01	-0.824583	7.462386e-54	6.638005e-51
MsG0280006446.01	MsG0380016299.01	0.824002	1.021632e-53	8.937194e-51
MsG0280010605.01	MsG0380016299.01	-0.804115	2.522503e-49	1.289871e-46
MsG0280010802.01	MsG0380016299.01	0.814254	1.692259e-51	1.129827e-48
MsG0280010936.01	MsG0380016299.01	0.847586	1.052709e-59	1.880061e-56
MsG0280011236.01	MsG0380016299.01	0.803282	3.755557e-49	1.879640e-46
MsG0280011238.01	MsG0380016299.01	0.813515	2.462278e-51	1.611344e-48
MsG0280011267.01	MsG0380016299.01	0.829983	3.793551e-55	3.944685e-52
MsG0280011269.01	MsG0380016299.01	0.835570	1.553782e-56	1.907495e-53
MsG0280011281.01	MsG0380016299.01	-0.810819	9.533957e-51	5.805864e-48
MsG0280011292.01	MsG0380016299.01	0.825895	3.651647e-54	3.372275e-51
MsG0380011635.01	MsG0380016299.01	0.845066	5.120822e-59	8.433017e-56
MsG0380011701.01	MsG0380016299.01	0.809934	1.480293e-50	8.806121e-48
MsG0380011702.01	MsG0380016299.01	0.801357	9.352670e-49	4.457504e-46
MsG0380011968.01	MsG0380016299.01	0.852473	4.510642e-61	9.435229e-58
MsG0380011974.01	MsG0380016299.01	0.835405	1.710486e-56	2.089683e-53
MsG0380012243.01	MsG0380016299.01	0.801820	7.516935e-49	3.624706e-46
MsG0380012654.01	MsG0380016299.01	0.809033	2.310513e-50	1.341951e-47
MsG0380012782.01	MsG0380016299.01	-0.809910	1.498286e-50	8.907396e-48
MsG0380012889.01	MsG0380016299.01	0.817062	4.007106e-52	2.888365e-49
MsG0380013114.01	MsG0380016299.01	-0.803385	3.575883e-49	1.794455e-46
MsG0380013272.01	MsG0380016299.01	0.813160	2.945817e-51	1.909096e-48
MsG0380013285.01	MsG0380016299.01	0.811151	8.080544e-51	4.964184e-48
MsG0380013506.01	MsG0380016299.01	-0.805417	1.348578e-49	7.130797e-47
MsG0380013843.01	MsG0380016299.01	0.816822	4.535148e-52	3.247528e-49
MsG0380014344.01	MsG0380016299.01	0.831087	2.036588e-55	2.187124e-52
MsG0380014410.01	MsG0380016299.01	0.800380	1.480844e-48	6.885316e-46
MsG0380014639.01	MsG0380016299.01	-0.821152	4.698681e-53	3.792476e-50
MsG0380014642.01	MsG0380016299.01	-0.824712	6.956993e-54	6.211917e-51
MsG0380014735.01	MsG0380016299.01	-0.813491	2.491956e-51	1.629793e-48
MsG0380014795.01	MsG0380016299.01	-0.807137	5.852918e-50	3.234511e-47
MsG0380015271.01	MsG0380016299.01	-0.802350	5.848462e-49	2.858576e-46
MsG0380015323.01	MsG0380016299.01	0.845600	3.671580e-59	6.150308e-56
MsG0380015369.01	MsG0380016299.01	0.809908	1.499631e-50	8.915003e-48
MsG0380015572.01	MsG0380016299.01	0.828824	7.252541e-55	7.289776e-52
MsG0380015659.01	MsG0380016299.01	0.852928	3.344930e-61	7.102845e-58
MsG0380015660.01	MsG0380016299.01	0.848967	4.372202e-60	8.163041e-57
MsG0380015711.01	MsG0380016299.01	0.842088	3.200798e-58	4.800163e-55
MsG0380015795.01	MsG0380016299.01	-0.808172	3.528841e-50	2.003775e-47
MsG0380016241.01	MsG0380016299.01	-0.801532	8.612682e-49	4.122889e-46
MsG0380016299.01	MsG0380016300.01	0.903225	4.322473e-79	6.339156e-75
MsG0380016299.01	MsG0380016301.01	0.873677	1.221439e-67	5.346243e-64
MsG0380016299.01	MsG0380016354.01	-0.800418	1.454852e-48	6.770968e-46
MsG0380016299.01	MsG0380016476.01	0.809736	1.632730e-50	9.662847e-48
MsG0380016299.01	MsG0380016485.01	0.810856	9.363097e-51	5.707501e-48
MsG0380016299.01	MsG0380016490.01	0.804737	1.871308e-49	9.724044e-47
MsG0380016299.01	MsG0380016934.01	-0.802218	6.226761e-49	3.033064e-46
MsG0380016299.01	MsG0380016935.01	-0.804949	1.689519e-49	8.827454e-47
MsG0380016299.01	MsG0380016960.01	-0.803678	3.107828e-49	1.571396e-46
MsG0380016299.01	MsG0380017030.01	0.810414	1.166679e-50	7.027793e-48
MsG0380016299.01	MsG0380017151.01	0.804440	2.157969e-49	1.112683e-46
MsG0380016299.01	MsG0380017168.01	0.832464	9.313359e-56	1.041776e-52
MsG0380016299.01	MsG0380017405.01	-0.802438	5.610804e-49	2.748470e-46
MsG0380016299.01	MsG0380017901.01	0.842850	2.010079e-58	3.087022e-55
MsG0380016299.01	MsG0480018098.01	-0.800292	1.543402e-48	7.160133e-46
MsG0380016299.01	MsG0480018201.01	-0.810016	1.421551e-50	8.475141e-48
MsG0380016299.01	MsG0480018202.01	-0.815084	1.107952e-51	7.564870e-49
MsG0380016299.01	MsG0480018203.01	-0.810761	9.812700e-51	5.966454e-48
MsG0380016299.01	MsG0480018328.01	-0.807123	5.893667e-50	3.255785e-47
MsG0380016299.01	MsG0480018330.01	-0.810507	1.113518e-50	6.724499e-48
MsG0380016299.01	MsG0480018406.01	0.805637	1.212295e-49	6.446732e-47
MsG0380016299.01	MsG0480018409.01	0.812995	3.202055e-51	2.066090e-48
MsG0380016299.01	MsG0480018433.01	0.812413	4.293667e-51	2.728302e-48
MsG0380016299.01	MsG0480018438.01	0.802662	5.044040e-49	2.484896e-46
MsG0380016299.01	MsG0480018494.01	-0.801449	8.958087e-49	4.279222e-46
MsG0380016299.01	MsG0480018622.01	0.812342	4.449930e-51	2.822122e-48
MsG0380016299.01	MsG0480019024.01	0.813528	2.445210e-51	1.600816e-48
MsG0380016299.01	MsG0480019146.01	0.881758	1.839500e-70	1.090853e-66
MsG0380016299.01	MsG0480019301.01	0.822409	2.405454e-53	2.011845e-50
MsG0380016299.01	MsG0480019346.01	0.839648	1.397774e-57	1.942694e-54
MsG0380016299.01	MsG0480019348.01	0.858284	9.158903e-63	2.325507e-59
MsG0380016299.01	MsG0480019484.01	-0.801651	8.141578e-49	3.909013e-46
MsG0380016299.01	MsG0480019666.01	0.814022	1.903457e-51	1.262886e-48
MsG0380016299.01	MsG0480019842.01	0.839678	1.372834e-57	1.909718e-54
MsG0380016299.01	MsG0480020539.01	0.815650	8.294393e-52	5.752137e-49
MsG0380016299.01	MsG0480020595.01	0.819164	1.341083e-52	1.024123e-49
MsG0380016299.01	MsG0480020755.01	0.803745	3.010593e-49	1.524875e-46
MsG0380016299.01	MsG0480020904.01	0.879993	7.913958e-70	4.384755e-66
MsG0380016299.01	MsG0480021129.01	0.815844	7.504951e-52	5.231961e-49
MsG0380016299.01	MsG0480021133.01	0.864808	9.316346e-65	2.963377e-61
MsG0380016299.01	MsG0480021360.01	0.852109	5.727096e-61	1.184279e-57
MsG0380016299.01	MsG0480021361.01	0.820550	6.463589e-53	5.130238e-50
MsG0380016299.01	MsG0480021497.01	-0.804809	1.807690e-49	9.410791e-47
MsG0380016299.01	MsG0480021573.01	0.811602	6.449324e-51	4.009283e-48
MsG0380016299.01	MsG0480021967.01	-0.818662	1.744022e-52	1.313485e-49
MsG0380016299.01	MsG0480022055.01	0.849318	3.493101e-60	6.596808e-57
MsG0380016299.01	MsG0480022308.01	0.806440	8.219504e-50	4.461496e-47
MsG0380016299.01	MsG0480022411.01	-0.814060	1.867347e-51	1.240182e-48
MsG0380016299.01	MsG0480022428.01	0.805975	1.029403e-49	5.521921e-47
MsG0380016299.01	MsG0480022430.01	0.804337	2.267756e-49	1.166203e-46
MsG0380016299.01	MsG0480022626.01	-0.806457	8.150378e-50	4.426077e-47
MsG0380016299.01	MsG0480022833.01	0.808960	2.395187e-50	1.388417e-47
MsG0380016299.01	MsG0480023067.01	0.805181	1.511323e-49	7.943012e-47
MsG0380016299.01	MsG0480023103.01	-0.811569	6.555863e-51	4.072185e-48
MsG0380016299.01	MsG0480023107.01	0.818688	1.720467e-52	1.296703e-49
MsG0380016299.01	MsG0480023152.01	-0.815543	8.761075e-52	6.057834e-49
MsG0380016299.01	MsG0480023211.01	-0.800345	1.505335e-48	6.992950e-46
MsG0380016299.01	MsG0480023244.01	-0.802002	6.898182e-49	3.341642e-46
MsG0380016299.01	MsG0480023429.01	0.819844	9.383197e-53	7.303013e-50
MsG0380016299.01	MsG0480023431.01	0.810934	9.005679e-51	5.501315e-48
MsG0380016299.01	MsG0480023432.01	0.864661	1.035423e-64	3.277027e-61
MsG0380016299.01	MsG0480023466.01	-0.801128	1.042173e-48	4.938438e-46
MsG0380016299.01	MsG0480023469.01	-0.802885	4.536935e-49	2.247871e-46
MsG0380016299.01	MsG0480023531.01	-0.810325	1.219301e-50	7.327807e-48
MsG0380016299.01	MsG0480023695.01	-0.811016	8.645265e-51	5.292709e-48
MsG0380016299.01	MsG0480023851.01	-0.808795	2.598103e-50	1.499404e-47
MsG0380016299.01	MsG0480023987.01	0.800696	1.276745e-48	5.983798e-46
MsG0380016299.01	MsG0480023993.01	-0.803021	4.253298e-49	2.114489e-46
MsG0380016299.01	MsG0580024087.01	0.869628	2.685161e-66	1.014576e-62
MsG0380016299.01	MsG0580024138.01	0.801511	8.697599e-49	4.161368e-46
MsG0380016299.01	MsG0580024398.01	0.804182	2.442908e-49	1.251271e-46
MsG0380016299.01	MsG0580024408.01	0.802410	5.685707e-49	2.783224e-46
MsG0380016299.01	MsG0580024442.01	-0.805758	1.143585e-49	6.100503e-47
MsG0380016299.01	MsG0580024464.01	0.830845	2.334441e-55	2.489209e-52
MsG0380016299.01	MsG0580024493.01	-0.811084	8.354936e-51	5.123835e-48
MsG0380016299.01	MsG0580024678.01	-0.803726	3.038722e-49	1.538339e-46
MsG0380016299.01	MsG0580024839.01	0.822366	2.461328e-53	2.056130e-50
MsG0380016299.01	MsG0580024840.01	0.824854	6.439466e-54	5.773019e-51
MsG0380016299.01	MsG0580025023.01	0.807526	4.842807e-50	2.703549e-47
MsG0380016299.01	MsG0580025105.01	-0.830675	2.570132e-55	2.726817e-52
MsG0380016299.01	MsG0580025259.01	-0.813230	2.844066e-51	1.846664e-48
MsG0380016299.01	MsG0580025392.01	-0.816955	4.234074e-52	3.043273e-49
MsG0380016299.01	MsG0580025431.01	0.832988	6.901952e-56	7.842723e-53
MsG0380016299.01	MsG0580025432.01	0.813464	2.526540e-51	1.651200e-48
MsG0380016299.01	MsG0580025447.01	-0.802567	5.276407e-49	2.593067e-46
MsG0380016299.01	MsG0580025507.01	0.819092	1.392375e-52	1.061246e-49
MsG0380016299.01	MsG0580025524.01	0.822907	1.842130e-53	1.562597e-50
MsG0380016299.01	MsG0580025550.01	0.824471	7.930164e-54	7.030484e-51
MsG0380016299.01	MsG0580025586.01	0.828116	1.075230e-54	1.058801e-51
MsG0380016299.01	MsG0580025590.01	0.853205	2.787479e-61	5.976143e-58
MsG0380016299.01	MsG0580025960.01	0.808107	3.642904e-50	2.064833e-47
MsG0380016299.01	MsG0580025961.01	0.818264	2.145834e-52	1.598480e-49
MsG0380016299.01	MsG0580026019.01	0.817727	2.837597e-52	2.083031e-49
MsG0380016299.01	MsG0580026020.01	0.829865	4.051996e-55	4.199802e-52
MsG0380016299.01	MsG0580026148.01	0.816918	4.315583e-52	3.098412e-49
MsG0380016299.01	MsG0580026211.01	-0.802105	6.569692e-49	3.190881e-46
MsG0380016299.01	MsG0580026521.01	0.853926	1.729411e-61	3.797779e-58
MsG0380016299.01	MsG0580027276.01	-0.819843	9.384568e-53	7.304004e-50
MsG0380016299.01	MsG0580027751.01	0.834077	3.691798e-56	4.333710e-53
MsG0380016299.01	MsG0580027752.01	0.863501	2.379886e-64	7.230407e-61
MsG0380016299.01	MsG0580027753.01	0.835412	1.703710e-56	2.081824e-53
MsG0380016299.01	MsG0580029240.01	0.808177	3.520200e-50	1.999097e-47
MsG0380016299.01	MsG0580029359.01	0.845472	3.974939e-59	6.631621e-56
MsG0380016299.01	MsG0580029445.01	0.811392	7.162356e-51	4.428222e-48
MsG0380016299.01	MsG0580029674.01	0.800099	1.689078e-48	7.797429e-46
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MsG0380016299.01	MsG0580029751.01	-0.800091	1.695577e-48	7.825850e-46
MsG0380016299.01	MsG0580029937.01	0.855544	5.876767e-62	1.361459e-58
MsG0380016299.01	MsG0580029938.01	0.859221	4.804759e-63	1.259566e-59
MsG0380016299.01	MsG0680030296.01	0.809071	2.267621e-50	1.318414e-47
MsG0380016299.01	MsG0680030379.01	0.819256	1.277997e-52	9.784915e-50
MsG0380016299.01	MsG0680030382.01	0.804574	2.023934e-49	1.047192e-46
MsG0380016299.01	MsG0680030465.01	0.828232	1.007780e-54	9.956903e-52
MsG0380016299.01	MsG0680030613.01	0.802037	6.784458e-49	3.289557e-46
MsG0380016299.01	MsG0680030635.01	-0.800521	1.386027e-48	6.467366e-46
MsG0380016299.01	MsG0680030960.01	0.829354	5.394775e-55	5.508568e-52
MsG0380016299.01	MsG0680031009.01	0.811371	7.240793e-51	4.474068e-48
MsG0380016299.01	MsG0680031139.01	0.816545	5.233909e-52	3.719375e-49
MsG0380016299.01	MsG0680031200.01	0.832828	7.565948e-56	8.555242e-53
MsG0380016299.01	MsG0680031474.01	0.846215	2.497463e-59	4.267333e-56
MsG0380016299.01	MsG0680031684.01	0.836240	1.051067e-56	1.316919e-53
MsG0380016299.01	MsG0680032932.01	0.841625	4.243031e-58	6.271138e-55
MsG0380016299.01	MsG0680032942.01	0.804280	2.329835e-49	1.196398e-46
MsG0380016299.01	MsG0680033015.01	0.806089	9.745338e-50	5.242577e-47
MsG0380016299.01	MsG0680033617.01	0.829160	6.013812e-55	6.105146e-52
MsG0380016299.01	MsG0680033754.01	0.806829	6.803471e-50	3.729971e-47
MsG0380016299.01	MsG0680033755.01	0.819506	1.120672e-52	8.640457e-50
MsG0380016299.01	MsG0680034238.01	0.860732	1.682396e-63	4.645606e-60
MsG0380016299.01	MsG0680034254.01	0.810788	9.685710e-51	5.893283e-48
MsG0380016299.01	MsG0680034310.01	0.804695	1.909332e-49	9.910230e-47
MsG0380016299.01	MsG0680034312.01	0.808882	2.489672e-50	1.440126e-47
MsG0380016299.01	MsG0680034326.01	0.817753	2.800552e-52	2.057275e-49
MsG0380016299.01	MsG0680034328.01	0.806322	8.702206e-50	4.709391e-47
MsG0380016299.01	MsG0680034348.01	0.822699	2.059453e-53	1.736671e-50
MsG0380016299.01	MsG0680034354.01	0.836712	7.966906e-57	1.012310e-53
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MsG0380016299.01	MsG0680034357.01	0.804812	1.804550e-49	9.395299e-47
MsG0380016299.01	MsG0680034366.01	0.824705	6.982116e-54	6.233122e-51
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MsG0380016299.01	MsG0680034370.01	0.808669	2.764580e-50	1.590229e-47
MsG0380016299.01	MsG0680034391.01	0.815567	8.655121e-52	5.988488e-49
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MsG0380016299.01	MsG0680034728.01	0.855848	4.788024e-62	1.120612e-58
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MsG0380016299.01	MsG0780036054.01	0.810219	1.285354e-50	7.702914e-48
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MsG0280009253.01	MsG0380016299.01	0.823974	1.037588e-53	9.070379e-51
MsG0280009657.01	MsG0380016299.01	0.806318	8.720766e-50	4.718853e-47
MsG0280009742.01	MsG0380016299.01	-0.813303	2.741011e-51	1.783385e-48
MsG0280010149.01	MsG0380016299.01	-0.800478	1.414366e-48	6.592174e-46
MsG0280010410.01	MsG0380016299.01	0.805887	1.074193e-49	5.749150e-47
MsG0280010425.01	MsG0380016299.01	0.814945	1.189444e-51	8.090736e-49
MsG0280010515.01	MsG0380016299.01	0.817410	3.345427e-52	2.434525e-49
MsG0280010539.01	MsG0380016299.01	0.809077	2.261317e-50	1.314956e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016299.01.T01	MTR_3g087270	93.970	199	12	0	1	199	1	199	3.94e-141	392
MsG0380016299.01.T01	MTR_3g087278	89.447	199	21	0	1	199	1	199	5.02e-132	369
MsG0380016299.01.T01	MTR_3g087280	87.940	199	24	0	1	199	1	199	8.59e-132	368
MsG0380016299.01.T01	MTR_3g087330	84.925	199	30	0	1	199	1	199	7.56e-128	358
MsG0380016299.01.T01	MTR_3g087325	85.930	199	28	0	1	199	1	199	3.75e-126	354
MsG0380016299.01.T01	MTR_3g087275	85.930	199	27	1	1	199	1	198	1.27e-123	347
MsG0380016299.01.T01	MTR_3g087300	65.990	197	23	3	1	197	1	153	4.05e-86	253

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016299.01.T01	AT5G65030	30.964	197	124	3	11	199	10	202	6.12e-26	99.4
MsG0380016299.01.T01	AT5G10210	32.124	193	109	7	15	196	13	194	6.00e-24	94.4

Find 35 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTACCAAATCAGTACCATTT+TGG	0.165786	3:-81664965	MsG0380016299.01.T01:CDS
ATAAGAGTAGGTTGAATAAT+TGG	0.258714	3:-81664650	MsG0380016299.01.T01:CDS
TGCGCTTGGCGCAGCTTTGG+AGG	0.349292	3:-81664559	MsG0380016299.01.T01:CDS
TTAATCTCCACTTCTACTTC+CGG	0.353807	3:+81664711	None:intergenic
TTAAATGACTCGTCCCAAAA+TGG	0.387620	3:+81664951	None:intergenic
ATTTGCGCTTGGCGCAGCTT+TGG	0.402289	3:-81664562	MsG0380016299.01.T01:CDS
GCTCCAACACTAGGCTTTGT+TGG	0.406615	3:+81664886	None:intergenic
AGTGGCTACGGTTCATGAAA+TGG	0.409468	3:-81664682	MsG0380016299.01.T01:CDS
GTCCCAAAATGGTACTGATT+TGG	0.410434	3:+81664962	None:intergenic
GATTCTAGAATCACTTTCCA+TGG	0.440184	3:+81664813	None:intergenic
GCAAGGCTGTATCTTCCAAC+AGG	0.447411	3:-81665026	MsG0380016299.01.T01:CDS
TGCACCAAGCGCGATGATCA+TGG	0.461361	3:+81664604	None:intergenic
TTGGAAAAGGTGAGATTCCA+TGG	0.470388	3:-81664830	MsG0380016299.01.T01:CDS
AAAGCCTAGTGTTGGAGCTA+AGG	0.499139	3:-81664881	MsG0380016299.01.T01:CDS
TTTGCCTTAGCTCCAACACT+AGG	0.507447	3:+81664877	None:intergenic
CAACTGAAGTTTGCATATGC+AGG	0.509989	3:+81665110	None:intergenic
GGGTCACAACTTATTGGAAA+AGG	0.536727	3:-81664843	MsG0380016299.01.T01:CDS
AGTGGAGATTAAAATAAGAG+TGG	0.548596	3:-81664700	MsG0380016299.01.T01:CDS
AATGAGTGTGGATGCAAGAA+TGG	0.549203	3:-81664627	MsG0380016299.01.T01:CDS
ATGGCCATGATCATCGCGCT+TGG	0.550412	3:-81664608	MsG0380016299.01.T01:CDS
GATTAAAATAAGAGTGGCTA+CGG	0.551977	3:-81664694	MsG0380016299.01.T01:CDS
GCTAAGGCAAAGGAAGATGT+GGG	0.557016	3:-81664865	MsG0380016299.01.T01:CDS
AGCTAAGGCAAAGGAAGATG+TGG	0.560256	3:-81664866	MsG0380016299.01.T01:CDS
GATTGTGATATATTTGCGCT+TGG	0.560902	3:-81664573	MsG0380016299.01.T01:CDS
TAACCAACAAAGCCTAGTGT+TGG	0.564525	3:-81664889	MsG0380016299.01.T01:CDS
TTGAAGATATATTTAGTGAG+TGG	0.575240	3:-81664765	MsG0380016299.01.T01:CDS
TTGAATAATTGGAATGAGTG+TGG	0.579695	3:-81664639	MsG0380016299.01.T01:CDS
GATTCTAGAATCACAAAACA+TGG	0.587863	3:-81664802	MsG0380016299.01.T01:CDS
TAGTGTTGGAGCTAAGGCAA+AGG	0.590191	3:-81664875	MsG0380016299.01.T01:CDS
CTCAACACCGGAAGTAGAAG+TGG	0.592858	3:-81664718	MsG0380016299.01.T01:CDS
AGAGGAAATGTTCTCAACAC+CGG	0.624098	3:-81664730	MsG0380016299.01.T01:CDS
GAGTGGAAGTGATTGCAAAG+AGG	0.644927	3:-81664748	MsG0380016299.01.T01:CDS
TAAGGCAAAGGAAGATGTGG+GGG	0.660678	3:-81664863	MsG0380016299.01.T01:CDS
AAACGTTGAATTCATCAAGT+CGG	0.660973	3:-81665063	MsG0380016299.01.T01:CDS
CTAAGGCAAAGGAAGATGTG+GGG	0.689053	3:-81664864	MsG0380016299.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAAACATGGAGTTGAAAAAA+TGG	-	Chr3:81664891-81664910	MsG0380016299.01.T01:CDS	25.0%
!	TGGAAAAGAAAAATAAGAGT+AGG	-	Chr3:81665017-81665036	MsG0380016299.01.T01:CDS	25.0%
!	TTGAAGATATATTTAGTGAG+TGG	-	Chr3:81664914-81664933	MsG0380016299.01.T01:CDS	25.0%
!!	ATAAGAGTAGGTTGAATAAT+TGG	-	Chr3:81665029-81665048	MsG0380016299.01.T01:CDS	25.0%
	AAACGTTGAATTCATCAAGT+CGG	-	Chr3:81664616-81664635	MsG0380016299.01.T01:CDS	30.0%
	AGTGGAGATTAAAATAAGAG+TGG	-	Chr3:81664979-81664998	MsG0380016299.01.T01:CDS	30.0%
	GATTAAAATAAGAGTGGCTA+CGG	-	Chr3:81664985-81665004	MsG0380016299.01.T01:CDS	30.0%
	TTGAATAATTGGAATGAGTG+TGG	-	Chr3:81665040-81665059	MsG0380016299.01.T01:CDS	30.0%
!	AAGATTTTCCAAGAATTCCT+GGG	+	Chr3:81664771-81664790	None:intergenic	30.0%
!	TAAGATTTTCCAAGAATTCC+TGG	+	Chr3:81664772-81664791	None:intergenic	30.0%
!	TACCAAATCAGTACCATTTT+GGG	-	Chr3:81664715-81664734	MsG0380016299.01.T01:CDS	30.0%
!!	GATTCTAGAATCACAAAACA+TGG	-	Chr3:81664877-81664896	MsG0380016299.01.T01:CDS	30.0%
!!!	ATACTTTTGTTGTTTCCTGT+TGG	+	Chr3:81664671-81664690	None:intergenic	30.0%
	GATTGTGATATATTTGCGCT+TGG	-	Chr3:81665106-81665125	MsG0380016299.01.T01:CDS	35.0%
	TTAAATGACTCGTCCCAAAA+TGG	+	Chr3:81664731-81664750	None:intergenic	35.0%
	TTAATCTCCACTTCTACTTC+CGG	+	Chr3:81664971-81664990	None:intergenic	35.0%
!	AGATTTTCCAAGAATTCCTG+GGG	+	Chr3:81664770-81664789	None:intergenic	35.0%
!	CTACCAAATCAGTACCATTT+TGG	-	Chr3:81664714-81664733	MsG0380016299.01.T01:CDS	35.0%
!!	GATTCTAGAATCACTTTCCA+TGG	+	Chr3:81664869-81664888	None:intergenic	35.0%
	AATGAGTGTGGATGCAAGAA+TGG	-	Chr3:81665052-81665071	MsG0380016299.01.T01:CDS	40.0%
	AGAGGAAATGTTCTCAACAC+CGG	-	Chr3:81664949-81664968	MsG0380016299.01.T01:CDS	40.0%
	CAACTGAAGTTTGCATATGC+AGG	+	Chr3:81664572-81664591	None:intergenic	40.0%
	CGGCAAAAAACATGTTTGCA+AGG	-	Chr3:81664636-81664655	MsG0380016299.01.T01:CDS	40.0%
	GGGTCACAACTTATTGGAAA+AGG	-	Chr3:81664836-81664855	MsG0380016299.01.T01:CDS	40.0%
	TAACCAACAAAGCCTAGTGT+TGG	-	Chr3:81664790-81664809	MsG0380016299.01.T01:CDS	40.0%
	TTGGAAAAGGTGAGATTCCA+TGG	-	Chr3:81664849-81664868	MsG0380016299.01.T01:CDS	40.0%
!	GATTTTCCAAGAATTCCTGG+GGG	+	Chr3:81664769-81664788	None:intergenic	40.0%
!!	GTCCCAAAATGGTACTGATT+TGG	+	Chr3:81664720-81664739	None:intergenic	40.0%
	AGCTAAGGCAAAGGAAGATG+TGG	-	Chr3:81664813-81664832	MsG0380016299.01.T01:CDS	45.0%
	AGTGGCTACGGTTCATGAAA+TGG	-	Chr3:81664997-81665016	MsG0380016299.01.T01:CDS	45.0%
	ATGTGGGGGTCACAACTTAT+TGG	-	Chr3:81664830-81664849	MsG0380016299.01.T01:CDS	45.0%
	CTAAGGCAAAGGAAGATGTG+GGG	-	Chr3:81664815-81664834	MsG0380016299.01.T01:CDS	45.0%
	GAGTGGAAGTGATTGCAAAG+AGG	-	Chr3:81664931-81664950	MsG0380016299.01.T01:CDS	45.0%
	GCTAAGGCAAAGGAAGATGT+GGG	-	Chr3:81664814-81664833	MsG0380016299.01.T01:CDS	45.0%
	TAAGGCAAAGGAAGATGTGG+GGG	-	Chr3:81664816-81664835	MsG0380016299.01.T01:CDS	45.0%
	TTTGCCTTAGCTCCAACACT+AGG	+	Chr3:81664805-81664824	None:intergenic	45.0%
!	AAAGCCTAGTGTTGGAGCTA+AGG	-	Chr3:81664798-81664817	MsG0380016299.01.T01:CDS	45.0%
!	GCATATGCAGGTGTTTTCGA+TGG	+	Chr3:81664560-81664579	None:intergenic	45.0%
!	TAGTGTTGGAGCTAAGGCAA+AGG	-	Chr3:81664804-81664823	MsG0380016299.01.T01:CDS	45.0%
	CTCAACACCGGAAGTAGAAG+TGG	-	Chr3:81664961-81664980	MsG0380016299.01.T01:CDS	50.0%
	GCAAGGCTGTATCTTCCAAC+AGG	-	Chr3:81664653-81664672	MsG0380016299.01.T01:CDS	50.0%
	TCTAGATTGTTCTTGCCCCC+AGG	-	Chr3:81664751-81664770	MsG0380016299.01.T01:CDS	50.0%
	TTCTTGCCCCCAGGAATTCT+TGG	-	Chr3:81664760-81664779	MsG0380016299.01.T01:CDS	50.0%
!	GCTCCAACACTAGGCTTTGT+TGG	+	Chr3:81664796-81664815	None:intergenic	50.0%
	ATGGCCATGATCATCGCGCT+TGG	-	Chr3:81665071-81665090	MsG0380016299.01.T01:CDS	55.0%
	ATTTGCGCTTGGCGCAGCTT+TGG	-	Chr3:81665117-81665136	MsG0380016299.01.T01:CDS	55.0%
	TGCACCAAGCGCGATGATCA+TGG	+	Chr3:81665078-81665097	None:intergenic	55.0%
!	TGCGCTTGGCGCAGCTTTGG+AGG	-	Chr3:81665120-81665139	MsG0380016299.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	81664551	81665150	81664551	ID=MsG0380016299.01;Name=MsG0380016299.01
Chr3	mRNA	81664551	81665150	81664551	ID=MsG0380016299.01.T01;Parent=MsG0380016299.01;Name=MsG0380016299.01.T01;_AED=0.48;_eAED=0.48;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|199
Chr3	exon	81664551	81665150	81664551	ID=MsG0380016299.01.T01:exon:33052;Parent=MsG0380016299.01.T01
Chr3	CDS	81664551	81665150	81664551	ID=MsG0380016299.01.T01:cds;Parent=MsG0380016299.01.T01

Gene Sequence

>MsG0380016299.01.T01

ATGGATCCATCGAAAACACCTGCATATGCAAACTTCAGTTGTGAACTGAGAATAATACAAGCACGAAACGTTGAATTCATCAAGTCGGCAAAAAACATGTTTGCAAGGCTGTATCTTCCAACAGGAAACAACAAAAGTATTCAACTCAACAGCAAAAAAGTTTCTACCAAATCAGTACCATTTTGGGACGAGTCATTTAATCTAGATTGTTCTTGCCCCCAGGAATTCTTGGAAAATCTTAACCAACAAAGCCTAGTGTTGGAGCTAAGGCAAAGGAAGATGTGGGGGTCACAACTTATTGGAAAAGGTGAGATTCCATGGAAAGTGATTCTAGAATCACAAAACATGGAGTTGAAAAAATGGTTGAAGATATATTTAGTGAGTGGAAGTGATTGCAAAGAGGAAATGTTCTCAACACCGGAAGTAGAAGTGGAGATTAAAATAAGAGTGGCTACGGTTCATGAAATGGAAAAGAAAAATAAGAGTAGGTTGAATAATTGGAATGAGTGTGGATGCAAGAATGGCCATGATCATCGCGCTTGGTGCAGCGCTGAAGATTGTGATATATTTGCGCTTGGCGCAGCTTTGGAGGCTTTTTGA

Protein sequence

>MsG0380016299.01.T01

MDPSKTPAYANFSCELRIIQARNVEFIKSAKNMFARLYLPTGNNKSIQLNSKKVSTKSVPFWDESFNLDCSCPQEFLENLNQQSLVLELRQRKMWGSQLIGKGEIPWKVILESQNMELKKWLKIYLVSGSDCKEEMFSTPEVEVEIKIRVATVHEMEKKNKSRLNNWNECGCKNGHDHRAWCSAEDCDIFALGAALEAF*