AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019348.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019348.01.T01 MTR_4g029170 94.551 312 17 0 121 432 10 321 0.0 613
MsG0480019348.01.T01 MTR_4g029180 88.699 292 33 0 141 432 30 321 0.0 548
MsG0480019348.01.T01 MTR_5g074710 60.828 314 117 4 123 432 10 321 6.95e-132 383
MsG0480019348.01.T01 MTR_5g074740 61.059 321 118 5 117 432 3 321 1.20e-131 382
MsG0480019348.01.T01 MTR_5g074860 58.589 326 120 6 113 431 7 324 1.98e-130 379
MsG0480019348.01.T01 MTR_5g074970 61.587 315 117 2 121 432 13 326 3.17e-130 379
MsG0480019348.01.T01 MTR_5g074760 59.873 314 120 4 123 432 10 321 3.48e-130 378
MsG0480019348.01.T01 MTR_3g466200 58.786 313 125 3 123 432 9 320 3.40e-123 360
MsG0480019348.01.T01 MTR_3g072190 58.413 315 126 3 121 432 6 318 1.16e-121 357
MsG0480019348.01.T01 MTR_3g467600 57.778 315 127 4 123 432 11 324 5.60e-120 352
MsG0480019348.01.T01 MTR_3g094650 56.550 313 131 4 123 432 12 322 2.76e-119 350
MsG0480019348.01.T01 MTR_7g072510 58.644 295 120 2 138 432 20 312 7.67e-119 349
MsG0480019348.01.T01 MTR_5g083860 54.154 325 144 4 111 432 3 325 1.37e-118 349
MsG0480019348.01.T01 MTR_7g072480 56.467 317 134 3 118 432 2 316 2.05e-115 340
MsG0480019348.01.T01 MTR_2g084020 55.519 308 134 3 126 432 13 318 2.22e-115 340
MsG0480019348.01.T01 MTR_4g029200 53.822 314 143 2 119 432 27 338 3.21e-115 341
MsG0480019348.01.T01 MTR_2g084000 55.663 309 133 4 126 432 13 319 8.66e-115 339
MsG0480019348.01.T01 MTR_2g084080 52.885 312 145 2 121 432 8 317 1.09e-113 336
MsG0480019348.01.T01 MTR_3g094630 57.188 313 129 4 123 432 12 322 5.02e-113 335
MsG0480019348.01.T01 MTR_3g094670 56.230 313 132 4 123 432 12 322 9.63e-113 334
MsG0480019348.01.T01 MTR_4g083710 54.603 315 136 5 123 432 12 324 1.38e-112 333
MsG0480019348.01.T01 MTR_2g084110 53.420 307 141 2 126 432 13 317 4.89e-112 332
MsG0480019348.01.T01 MTR_2g084010 54.221 308 138 3 126 432 13 318 6.86e-112 332
MsG0480019348.01.T01 MTR_3g466180 55.449 312 137 2 121 432 14 323 8.67e-111 329
MsG0480019348.01.T01 MTR_2g084090 52.201 318 148 4 116 432 4 318 1.55e-109 325
MsG0480019348.01.T01 MTR_5g021060 55.116 303 126 4 138 432 30 330 4.31e-108 322
MsG0480019348.01.T01 MTR_4g029190 54.608 293 129 3 142 432 50 340 1.91e-106 318
MsG0480019348.01.T01 MTR_1g115900 51.111 315 148 4 121 432 10 321 1.97e-106 318
MsG0480019348.01.T01 MTR_4g074995 52.396 313 129 5 125 432 11 308 2.00e-106 317
MsG0480019348.01.T01 MTR_7g026990 52.960 321 141 5 113 432 11 322 2.18e-106 318
MsG0480019348.01.T01 MTR_8g076820 53.770 305 131 4 136 432 28 330 3.13e-105 315
MsG0480019348.01.T01 MTR_4g074990 51.274 314 132 5 123 432 9 305 1.69e-101 305
MsG0480019348.01.T01 MTR_3g072190 61.111 252 96 2 181 432 2 251 6.34e-101 301
MsG0480019348.01.T01 MTR_5g074860 49.693 326 110 7 113 431 7 285 3.15e-100 301
MsG0480019348.01.T01 MTR_1g022970 50.492 305 140 4 137 432 45 347 2.32e-98 298
MsG0480019348.01.T01 MTR_4g122640 50.163 307 145 4 132 432 32 336 2.07e-97 295
MsG0480019348.01.T01 MTR_4g125940 50.000 328 148 6 116 432 7 329 1.43e-96 293
MsG0480019348.01.T01 MTR_2g028980 49.688 320 148 5 123 432 14 330 4.64e-96 293
MsG0480019348.01.T01 MTR_7g093370 47.188 320 157 5 123 432 54 371 4.71e-96 293
MsG0480019348.01.T01 MTR_5g014100 51.299 308 135 4 138 432 26 331 5.14e-95 289
MsG0480019348.01.T01 MTR_5g017850 46.562 320 160 4 121 432 10 326 2.61e-94 287
MsG0480019348.01.T01 MTR_2g029750 47.649 319 156 4 123 432 14 330 2.74e-94 288
MsG0480019348.01.T01 MTR_1g054205 47.869 305 147 5 138 432 24 326 3.38e-94 287
MsG0480019348.01.T01 MTR_2g029860 47.962 319 153 5 125 432 14 330 8.00e-94 286
MsG0480019348.01.T01 MTR_2g029800 47.962 319 155 4 123 432 14 330 1.23e-93 286
MsG0480019348.01.T01 MTR_2g029815 47.826 322 154 5 123 432 11 330 1.52e-93 286
MsG0480019348.01.T01 MTR_2g029820 47.649 319 156 4 123 432 14 330 3.26e-93 285
MsG0480019348.01.T01 MTR_5g017860 46.250 320 161 4 121 432 10 326 6.09e-93 283
MsG0480019348.01.T01 MTR_2g040000 49.186 307 140 5 138 432 29 331 9.06e-93 283
MsG0480019348.01.T01 MTR_2g029830 48.684 304 145 4 138 432 28 329 1.30e-91 281
MsG0480019348.01.T01 MTR_2g029850 47.335 319 157 4 123 432 14 330 3.19e-91 280
MsG0480019348.01.T01 MTR_5g049280 48.860 307 143 7 138 432 33 337 1.33e-90 278
MsG0480019348.01.T01 MTR_2g029560 46.032 315 157 5 128 432 14 325 3.91e-90 277
MsG0480019348.01.T01 MTR_2g029740 46.395 319 160 4 123 432 14 330 8.13e-90 276
MsG0480019348.01.T01 MTR_4g074980 47.436 312 136 8 123 432 9 294 1.18e-89 274
MsG0480019348.01.T01 MTR_2g029910 45.625 320 162 5 123 432 15 332 2.29e-88 273
MsG0480019348.01.T01 MTR_4g125940 52.347 277 117 5 167 432 2 274 5.16e-87 266
MsG0480019348.01.T01 MTR_4g030890 47.249 309 151 5 131 432 93 396 9.08e-87 271
MsG0480019348.01.T01 MTR_2g029730 45.625 320 161 5 123 432 10 326 2.44e-85 265
MsG0480019348.01.T01 MTR_4g074980 53.441 247 108 5 123 364 9 253 3.00e-84 258
MsG0480019348.01.T01 MTR_4g031140 45.277 307 156 5 133 432 23 324 5.01e-84 261
MsG0480019348.01.T01 MTR_2g088770 43.218 317 167 7 125 432 13 325 1.87e-81 254
MsG0480019348.01.T01 MTR_8g075100 43.322 307 159 7 133 432 21 319 4.09e-78 245
MsG0480019348.01.T01 MTR_0155s0040 40.000 315 175 7 125 432 8 315 4.63e-78 245
MsG0480019348.01.T01 MTR_1g086320 43.963 323 166 6 123 432 13 333 8.04e-78 245
MsG0480019348.01.T01 MTR_1g101830 41.875 320 171 8 121 432 10 322 1.27e-76 241
MsG0480019348.01.T01 MTR_5g022870 41.693 319 169 8 121 432 8 316 3.54e-76 240
MsG0480019348.01.T01 MTR_1g086490 43.807 331 162 7 123 432 13 340 7.52e-76 240
MsG0480019348.01.T01 MTR_4g046713 40.252 318 179 5 123 432 12 326 1.39e-75 239
MsG0480019348.01.T01 MTR_7g029030 40.881 318 177 6 123 432 6 320 2.68e-75 238
MsG0480019348.01.T01 MTR_5g074700 55.263 228 86 5 207 432 1 214 3.37e-75 234
MsG0480019348.01.T01 MTR_1g077000 41.554 296 165 6 138 432 39 327 7.75e-75 237
MsG0480019348.01.T01 MTR_3g092990 40.252 318 180 4 123 432 11 326 1.05e-74 237
MsG0480019348.01.T01 MTR_2g029830 49.225 258 120 4 184 432 6 261 1.48e-74 235
MsG0480019348.01.T01 MTR_2g008710 41.304 322 170 7 123 432 11 325 7.27e-74 234
MsG0480019348.01.T01 MTR_1g025980 41.853 313 167 7 123 428 10 314 5.50e-73 232
MsG0480019348.01.T01 MTR_1g009750 41.463 328 178 8 116 432 4 328 1.56e-72 231
MsG0480019348.01.T01 MTR_7g086870 40.878 296 168 5 138 432 22 311 2.13e-72 230
MsG0480019348.01.T01 MTR_1g038680 41.722 302 163 6 142 432 33 332 5.49e-70 224
MsG0480019348.01.T01 MTR_4g114210 40.625 320 171 6 125 432 8 320 3.02e-69 222
MsG0480019348.01.T01 MTR_6g027440 37.618 319 176 7 119 432 14 314 8.65e-69 221
MsG0480019348.01.T01 MTR_4g095450 38.580 324 187 6 110 428 4 320 9.42e-68 219
MsG0480019348.01.T01 MTR_7g086820 37.954 303 176 5 135 432 17 312 1.91e-67 218
MsG0480019348.01.T01 MTR_7g107520 38.730 315 180 6 125 432 12 320 7.82e-67 216
MsG0480019348.01.T01 MTR_1g090760 38.110 328 187 7 119 432 5 330 1.92e-66 216
MsG0480019348.01.T01 MTR_2g008160 41.558 308 163 6 136 432 22 323 2.19e-66 215
MsG0480019348.01.T01 MTR_6g043280 39.933 298 172 6 137 432 40 332 6.56e-66 214
MsG0480019348.01.T01 MTR_4g127670 39.474 304 171 6 138 432 24 323 4.75e-65 211
MsG0480019348.01.T01 MTR_5g016010 37.025 316 187 5 123 428 12 325 4.99e-65 212
MsG0480019348.01.T01 MTR_4g133800 39.735 302 164 7 139 432 42 333 7.79e-65 211
MsG0480019348.01.T01 MTR_3g072210 57.527 186 76 3 249 432 54 238 8.44e-65 208
MsG0480019348.01.T01 MTR_4g087965 40.635 315 173 7 126 428 30 342 1.10e-64 211
MsG0480019348.01.T01 MTR_2g437770 42.244 303 156 8 138 432 50 341 1.89e-64 211
MsG0480019348.01.T01 MTR_3g092990 38.050 318 176 5 123 432 11 315 5.81e-63 206
MsG0480019348.01.T01 MTR_2g099175 39.185 319 175 7 126 432 24 335 1.03e-62 206
MsG0480019348.01.T01 MTR_1g009750 38.532 327 172 9 116 432 4 311 2.34e-62 204
MsG0480019348.01.T01 MTR_8g062780 36.050 319 193 5 123 432 8 324 4.88e-61 201
MsG0480019348.01.T01 MTR_0286s0010 37.049 305 182 6 136 432 32 334 7.85e-60 198
MsG0480019348.01.T01 MTR_6g008075 37.049 305 182 6 136 432 32 334 7.85e-60 198
MsG0480019348.01.T01 MTR_2g077990 38.024 334 165 8 136 430 74 404 9.76e-60 200
MsG0480019348.01.T01 MTR_2g078610 37.725 334 166 8 136 430 74 404 1.04e-59 200
MsG0480019348.01.T01 MTR_6g043460 37.584 298 180 5 137 432 35 328 4.53e-59 197
MsG0480019348.01.T01 MTR_6g043240 37.584 298 177 6 137 432 41 331 9.14e-59 196
MsG0480019348.01.T01 MTR_2g067440 37.237 333 168 8 136 431 58 386 3.86e-58 196
MsG0480019348.01.T01 MTR_2g008730 37.888 322 157 7 123 432 11 301 1.15e-56 189
MsG0480019348.01.T01 MTR_4g132490 34.437 302 188 5 138 432 29 327 2.14e-56 189
MsG0480019348.01.T01 MTR_3g105790 37.812 320 183 5 123 432 9 322 2.52e-56 189
MsG0480019348.01.T01 MTR_2g078280 36.957 322 161 8 136 418 74 392 6.22e-53 182
MsG0480019348.01.T01 MTR_2g008160 38.079 302 147 6 136 432 22 288 4.06e-52 177
MsG0480019348.01.T01 MTR_7g072490 44.215 242 79 4 184 425 2 187 3.65e-51 172
MsG0480019348.01.T01 MTR_1g066380 34.653 303 190 5 135 432 24 323 2.66e-50 173
MsG0480019348.01.T01 MTR_1g066710 35.762 302 186 5 136 432 25 323 3.02e-50 173
MsG0480019348.01.T01 MTR_1g066640 35.762 302 186 5 136 432 25 323 3.58e-50 173
MsG0480019348.01.T01 MTR_4g132110 34.437 302 190 5 136 432 30 328 4.34e-50 173
MsG0480019348.01.T01 MTR_5g033470 32.248 307 194 6 138 432 73 377 6.04e-49 171
MsG0480019348.01.T01 MTR_4g132110 33.876 307 190 6 136 432 30 333 1.10e-47 167
MsG0480019348.01.T01 MTR_1g066680 34.437 302 189 6 136 432 25 322 2.14e-47 166
MsG0480019348.01.T01 MTR_2g067450 35.831 307 180 9 136 431 9 309 4.82e-46 161
MsG0480019348.01.T01 MTR_0147s0010 31.464 321 177 7 138 431 77 381 8.29e-44 157
MsG0480019348.01.T01 MTR_2g008160 46.023 176 89 4 136 311 22 191 4.02e-42 148
MsG0480019348.01.T01 MTR_1g066380 34.375 256 160 5 182 432 3 255 2.05e-39 142
MsG0480019348.01.T01 MTR_2g029880 42.708 192 88 5 251 432 9 188 4.00e-39 140
MsG0480019348.01.T01 MTR_3g072260 63.636 110 39 1 138 247 26 134 4.35e-39 137
MsG0480019348.01.T01 MTR_3g105790 37.705 244 141 3 198 432 5 246 1.38e-38 140
MsG0480019348.01.T01 MTR_3g026820 64.220 109 22 1 1 109 120 211 1.48e-30 121
MsG0480019348.01.T01 MTR_3g086710 91.525 59 5 0 125 183 6 64 1.80e-30 113
MsG0480019348.01.T01 MTR_2g078560 32.735 223 111 5 244 428 95 316 7.15e-28 113
MsG0480019348.01.T01 MTR_3g462850 45.390 141 65 5 304 432 9 149 2.12e-27 107
MsG0480019348.01.T01 MTR_2g077980 32.609 276 137 9 200 430 11 282 2.93e-27 110
MsG0480019348.01.T01 MTR_6g075360 59.259 108 39 1 7 109 131 238 2.11e-26 112
MsG0480019348.01.T01 MTR_5g074770 49.462 93 44 2 341 431 17 108 5.27e-22 90.9
MsG0480019348.01.T01 MTR_5g058120 35.714 154 95 2 275 428 6 155 5.33e-22 95.1
MsG0480019348.01.T01 MTR_7g086790 39.344 122 68 3 185 306 17 132 3.51e-19 85.5
MsG0480019348.01.T01 MTR_1g089005 41.667 120 62 3 138 251 15 132 6.31e-18 80.9
MsG0480019348.01.T01 MTR_4g031040 34.911 169 71 4 197 365 1 130 5.48e-17 77.8
MsG0480019348.01.T01 MTR_6g048160 56.338 71 26 3 177 247 22 87 6.76e-17 75.9
MsG0480019348.01.T01 MTR_4g044740 56.000 75 26 1 30 104 28 95 1.43e-16 76.6
MsG0480019348.01.T01 MTR_4g114220 54.667 75 23 3 172 246 37 100 2.51e-16 75.9
MsG0480019348.01.T01 MTR_3g088160 29.615 260 140 11 172 414 121 354 1.02e-14 75.9
MsG0480019348.01.T01 MTR_3g088160 29.615 260 140 11 172 414 121 354 1.59e-14 75.5
MsG0480019348.01.T01 MTR_1g098320 41.026 78 46 0 355 432 47 124 2.49e-14 70.5
MsG0480019348.01.T01 MTR_2g029930 36.190 105 42 2 123 216 4 94 5.68e-14 68.2
MsG0480019348.01.T01 MTR_4g012865 38.889 72 44 0 138 209 77 148 7.59e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019348.01.T01 AT5G05340 62.290 297 108 3 138 432 30 324 3.85e-127 371
MsG0480019348.01.T01 AT1G14550 53.774 318 143 4 118 432 5 321 9.47e-111 329
MsG0480019348.01.T01 AT5G58400 52.866 314 145 2 121 432 13 325 4.30e-110 327
MsG0480019348.01.T01 AT5G58390 55.449 312 136 2 123 432 6 316 3.96e-109 325
MsG0480019348.01.T01 AT4G36430 53.465 303 131 4 138 432 30 330 4.56e-109 325
MsG0480019348.01.T01 AT2G18150 53.135 303 132 4 138 432 36 336 5.50e-108 322
MsG0480019348.01.T01 AT1G14540 52.229 314 146 4 121 432 4 315 4.51e-106 317
MsG0480019348.01.T01 AT2G18140 53.135 303 132 4 138 432 35 335 1.68e-105 316
MsG0480019348.01.T01 AT5G06720 47.289 332 157 5 117 432 4 333 5.48e-102 307
MsG0480019348.01.T01 AT3G50990 50.000 310 145 4 131 432 34 341 1.60e-101 306
MsG0480019348.01.T01 AT1G44970 49.363 314 148 4 128 432 35 346 5.51e-101 305
MsG0480019348.01.T01 AT5G66390 48.338 331 148 5 123 432 5 333 9.28e-101 304
MsG0480019348.01.T01 AT5G06730 45.768 319 162 4 123 432 18 334 6.71e-96 292
MsG0480019348.01.T01 AT3G32980 48.366 306 145 5 138 432 31 334 3.73e-94 288
MsG0480019348.01.T01 AT3G49110 48.701 308 145 5 136 432 31 336 1.29e-93 286
MsG0480019348.01.T01 AT3G49120 46.965 313 153 5 131 432 25 335 3.38e-91 280
MsG0480019348.01.T01 AT2G35380 47.321 336 153 7 114 432 7 335 1.46e-90 278
MsG0480019348.01.T01 AT4G08770 48.366 306 145 5 138 432 24 327 4.96e-90 277
MsG0480019348.01.T01 AT4G08780 47.712 306 147 5 138 432 24 327 1.26e-89 276
MsG0480019348.01.T01 AT5G19890 48.428 318 143 8 127 432 19 327 4.24e-89 274
MsG0480019348.01.T01 AT1G68850 45.779 308 152 6 138 432 30 335 1.14e-88 273
MsG0480019348.01.T01 AT1G49570 47.525 303 147 5 136 428 46 346 4.41e-88 272
MsG0480019348.01.T01 AT2G38380 46.130 323 157 7 124 432 14 333 7.03e-88 271
MsG0480019348.01.T01 AT4G16270 48.322 298 142 5 143 432 55 348 1.76e-87 270
MsG0480019348.01.T01 AT2G38390 43.789 322 166 6 124 432 14 333 8.32e-85 263
MsG0480019348.01.T01 AT5G19880 45.928 307 152 5 138 432 25 329 2.76e-83 259
MsG0480019348.01.T01 AT2G22420 42.724 323 173 5 117 432 2 319 2.15e-81 254
MsG0480019348.01.T01 AT1G71695 43.144 299 165 4 137 432 43 339 1.02e-77 246
MsG0480019348.01.T01 AT5G42180 41.640 317 171 6 121 430 6 315 1.35e-77 244
MsG0480019348.01.T01 AT3G01190 43.421 304 157 7 137 432 25 321 1.46e-77 244
MsG0480019348.01.T01 AT5G64120 42.761 297 157 5 142 432 39 328 5.77e-77 243
MsG0480019348.01.T01 AT5G17820 37.088 364 210 6 76 432 15 366 1.07e-76 243
MsG0480019348.01.T01 AT3G03670 40.994 322 174 6 121 432 6 321 4.71e-76 240
MsG0480019348.01.T01 AT5G17820 40.439 319 171 6 121 432 7 313 6.11e-76 239
MsG0480019348.01.T01 AT1G05260 40.867 323 178 7 119 432 7 325 8.70e-76 239
MsG0480019348.01.T01 AT5G51890 41.486 323 173 8 119 432 7 322 1.17e-75 239
MsG0480019348.01.T01 AT5G15180 41.587 315 171 7 126 432 20 329 1.30e-74 236
MsG0480019348.01.T01 AT3G21770 40.764 314 173 7 127 431 18 327 4.18e-74 235
MsG0480019348.01.T01 AT4G11290 40.000 320 179 7 123 432 10 326 2.25e-73 233
MsG0480019348.01.T01 AT4G33420 40.895 313 175 7 123 432 20 325 2.34e-72 231
MsG0480019348.01.T01 AT1G05240 41.639 305 163 7 138 432 26 325 5.52e-72 229
MsG0480019348.01.T01 AT1G05250 41.639 305 163 7 138 432 26 325 5.52e-72 229
MsG0480019348.01.T01 AT4G33420 40.895 313 175 7 123 432 67 372 1.54e-71 230
MsG0480019348.01.T01 AT2G41480 40.719 334 172 9 112 432 8 328 9.03e-70 224
MsG0480019348.01.T01 AT5G39580 41.562 320 172 8 121 432 7 319 1.56e-69 223
MsG0480019348.01.T01 AT2G18980 38.750 320 180 6 123 432 10 323 4.92e-68 219
MsG0480019348.01.T01 AT5G40150 40.864 301 172 5 136 432 30 328 6.14e-68 219
MsG0480019348.01.T01 AT4G26010 38.636 308 180 6 123 429 7 306 1.21e-67 218
MsG0480019348.01.T01 AT4G26010 38.636 308 180 6 123 429 35 334 2.84e-67 218
MsG0480019348.01.T01 AT2G35380 49.799 249 110 5 197 432 1 247 5.53e-67 214
MsG0480019348.01.T01 AT5G67400 37.975 316 184 5 123 428 12 325 2.79e-66 215
MsG0480019348.01.T01 AT5G14130 37.736 318 186 6 123 432 17 330 1.42e-65 213
MsG0480019348.01.T01 AT5G14130 37.736 318 186 6 123 432 58 371 3.10e-65 214
MsG0480019348.01.T01 AT3G28200 39.934 303 177 5 133 432 16 316 3.32e-65 212
MsG0480019348.01.T01 AT4G30170 39.016 305 170 7 138 432 27 325 3.71e-65 212
MsG0480019348.01.T01 AT1G34510 38.636 308 180 6 126 432 10 309 1.20e-64 210
MsG0480019348.01.T01 AT3G49960 37.342 316 186 5 123 428 12 325 2.94e-64 210
MsG0480019348.01.T01 AT4G37530 38.742 302 175 4 136 428 25 325 1.88e-63 207
MsG0480019348.01.T01 AT5G64100 40.924 303 159 7 140 432 39 331 3.50e-63 207
MsG0480019348.01.T01 AT1G30870 41.503 306 157 8 138 432 51 345 5.50e-63 207
MsG0480019348.01.T01 AT5G64110 40.000 325 176 7 119 432 14 330 5.93e-63 206
MsG0480019348.01.T01 AT5G47000 37.386 329 194 7 109 432 9 330 6.78e-63 206
MsG0480019348.01.T01 AT4G33870 33.521 355 190 7 120 431 49 400 6.88e-62 206
MsG0480019348.01.T01 AT4G17690 38.462 299 178 5 138 432 26 322 6.82e-61 201
MsG0480019348.01.T01 AT5G22410 35.737 319 184 10 123 429 13 322 1.20e-59 198
MsG0480019348.01.T01 AT2G39040 40.453 309 166 10 138 432 46 350 1.45e-59 198
MsG0480019348.01.T01 AT4G37520 37.417 302 179 4 136 428 25 325 1.85e-59 197
MsG0480019348.01.T01 AT4G31760 37.304 319 184 5 123 432 15 326 2.41e-59 197
MsG0480019348.01.T01 AT1G24110 37.954 303 178 6 138 432 22 322 9.81e-59 195
MsG0480019348.01.T01 AT4G37520 36.755 302 178 5 136 428 25 322 9.94e-58 192
MsG0480019348.01.T01 AT4G25980 35.650 331 194 7 115 432 2 326 1.43e-57 192
MsG0480019348.01.T01 AT5G24070 37.152 323 181 8 124 432 21 335 6.40e-56 188
MsG0480019348.01.T01 AT2G24800 36.393 305 178 5 138 432 31 329 3.01e-55 186
MsG0480019348.01.T01 AT4G37530 40.392 255 142 4 136 381 25 278 4.36e-55 184
MsG0480019348.01.T01 AT1G77100 39.145 304 172 9 136 432 22 319 6.69e-55 185
MsG0480019348.01.T01 AT2G34060 37.171 304 177 7 138 429 42 343 3.37e-54 184
MsG0480019348.01.T01 AT2G43480 36.364 319 181 8 128 432 25 335 8.43e-54 182
MsG0480019348.01.T01 AT2G37130 36.545 301 182 6 138 432 30 327 5.71e-53 180
MsG0480019348.01.T01 AT2G37130 36.577 298 180 6 141 432 2 296 6.06e-53 179
MsG0480019348.01.T01 AT4G21960 34.853 307 192 5 131 432 24 327 3.53e-52 178
MsG0480019348.01.T01 AT3G17070 33.657 309 184 8 138 432 38 339 7.55e-45 159
MsG0480019348.01.T01 AT5G39580 41.827 208 109 7 121 327 7 203 2.27e-39 142
MsG0480019348.01.T01 AT4G25980 39.899 198 112 5 115 311 47 238 1.29e-37 138
MsG0480019348.01.T01 AT3G17070 33.708 267 155 9 180 432 18 276 5.28e-34 128
MsG0480019348.01.T01 AT2G24800 41.667 168 92 3 138 305 31 192 1.28e-33 126
MsG0480019348.01.T01 AT1G77490 25.385 260 151 8 172 414 106 339 2.30e-13 72.0
MsG0480019348.01.T01 AT1G77490 25.385 260 151 8 172 414 106 339 2.85e-13 71.6

Find 81 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTAGCTGAATTGATATT+TGG 0.122185 4:-18799270 None:intergenic
AATATCTTGATGATCTTAAT+TGG 0.198524 4:-18800611 None:intergenic
CTAATAGTGCTCAGAGCATT+AGG 0.245488 4:-18798975 None:intergenic
CTTCCTTCCTGGATTTGTTC+AGG 0.247193 4:-18796820 None:intergenic
TGAAGTGATTGATGAGATTA+AGG 0.249015 4:+18799296 MsG0480019348.01.T01:CDS
GTTGGAGTCTCCTCCTTCTC+TGG 0.261467 4:-18800338 None:intergenic
TCGGATCAGGAATTATTAAA+TGG 0.273047 4:+18800445 MsG0480019348.01.T01:CDS
AGCAGCAGGCTCTTCCTTCC+TGG 0.282056 4:-18796831 None:intergenic
AAAGACCTCGTTGCCCTATC+TGG 0.286567 4:+18800211 MsG0480019348.01.T01:CDS
GGAAATATTAAGACACTTAC+TGG 0.289226 4:+18800553 MsG0480019348.01.T01:CDS
TTATTAAATGGTGATTATAC+TGG 0.313939 4:+18800457 MsG0480019348.01.T01:CDS
TACTTGTTAGTTGCGAGATT+TGG 0.331592 4:+18797771 MsG0480019348.01.T01:intron
GTGAAATTCGTTCAAATTGC+AGG 0.340953 4:+18800584 MsG0480019348.01.T01:CDS
AGTCGTGCCGATGCAGATTC+AGG 0.362977 4:+18800118 MsG0480019348.01.T01:CDS
TGCGAAATCTATGATTAAGA+TGG 0.368103 4:+18800531 MsG0480019348.01.T01:CDS
AAAGAAAGGGCTTCTTCATT+CGG 0.378097 4:+18800426 MsG0480019348.01.T01:CDS
AGGAACACATTTAGAGTCCT+TGG 0.383917 4:-18796746 None:intergenic
CTATCTGGAGCACACACTAT+TGG 0.391267 4:+18800226 MsG0480019348.01.T01:CDS
TGTTCTTGTCATTGTAGATT+CGG 0.397423 4:-18800276 None:intergenic
CAATAGTGTGTGCTCCAGAT+AGG 0.400931 4:-18800225 None:intergenic
TAATAGTGCTCAGAGCATTA+GGG 0.413537 4:-18798974 None:intergenic
TCCCTTGCATGATAGCTTCG+AGG 0.424024 4:-18796577 None:intergenic
CCTAGCTGCACTTTCCATGA+TGG 0.425419 4:-18800073 None:intergenic
CTCGTACCTGATGTAGGTCT+TGG 0.436723 4:-18796777 None:intergenic
AGAAAGACTGAATGATGGTC+CGG 0.452732 4:-18800149 None:intergenic
TGTTTCTTGTGCAGACATAT+TGG 0.453461 4:+18799350 MsG0480019348.01.T01:CDS
AGGGCTTCTTCATTCGGATC+AGG 0.466116 4:+18800432 MsG0480019348.01.T01:CDS
TCTAGACTCTACACCTTCCA+TGG 0.474313 4:+18799227 MsG0480019348.01.T01:CDS
CAAGATCTCACTAAGTCAAA+TGG 0.477373 4:-18797803 None:intergenic
AAAGAAGCTTTCCATGTTCG+AGG 0.482481 4:+18796638 MsG0480019348.01.T01:CDS
GGAACACATTTAGAGTCCTT+GGG 0.482624 4:-18796745 None:intergenic
TTGGAGTCTCCTCCTTCTCT+GGG 0.488124 4:-18800337 None:intergenic
ATGTCTGCACAAGAAACAAC+TGG 0.493198 4:-18799345 None:intergenic
GCGAAATCTATGATTAAGAT+GGG 0.499275 4:+18800532 MsG0480019348.01.T01:CDS
GATCGTTGGTTAGAAAATAT+AGG 0.503912 4:+18800479 MsG0480019348.01.T01:CDS
TGGACATCCTGAACAAATCC+AGG 0.509285 4:+18796813 MsG0480019348.01.T01:CDS
ATTTGATGTGTCATATTACC+AGG 0.518981 4:+18800393 MsG0480019348.01.T01:CDS
GAAAGACTGAATGATGGTCC+GGG 0.528311 4:-18800148 None:intergenic
ACAGTCTAGAGCTGCAAGGT+TGG 0.528477 4:-18800356 None:intergenic
GAGTCCTTGGGAGATCAAGA+TGG 0.532979 4:-18796733 None:intergenic
CCAAATATCAATTCAGCTAG+AGG 0.539441 4:+18799270 MsG0480019348.01.T01:CDS
GACATTTGTCCCAGAGAAGG+AGG 0.539825 4:+18800328 MsG0480019348.01.T01:CDS
ATTCATCAGCACCTCGAACA+TGG 0.540409 4:-18796649 None:intergenic
ATTGTGATTCAGGGTTGTGA+TGG 0.541677 4:+18799195 MsG0480019348.01.T01:intron
CAAGACATTTGTCCCAGAGA+AGG 0.543913 4:+18800325 MsG0480019348.01.T01:CDS
CGAACCTCTCGATGTAATCT+CGG 0.547528 4:-18796613 None:intergenic
AATAGTGTGTGCTCCAGATA+GGG 0.548473 4:-18800224 None:intergenic
TGTAGGTCTTGGCAATCTCT+AGG 0.560618 4:-18796766 None:intergenic
GCAGATTCAGGCAACATCCC+CGG 0.567065 4:+18800130 MsG0480019348.01.T01:CDS
TGCAGTTAGGAGGACCATCA+TGG 0.571529 4:+18800059 MsG0480019348.01.T01:intron
TCGTCCATCTTGATCTCCCA+AGG 0.574951 4:+18796729 MsG0480019348.01.T01:CDS
GTTCTTCCAGGCAATAGTGT+TGG 0.575808 4:+18798893 MsG0480019348.01.T01:intron
TGCCTCGAAGCTATCATGCA+AGG 0.580961 4:+18796575 MsG0480019348.01.T01:CDS
TGGTGATTATACTGGATCGT+TGG 0.583357 4:+18800465 MsG0480019348.01.T01:CDS
AGATTGCCAAGACCTACATC+AGG 0.591448 4:+18796771 MsG0480019348.01.T01:CDS
TATATATGGATGCAGTTAGG+AGG 0.592979 4:+18800049 MsG0480019348.01.T01:intron
ATTGTGAACGTTCTGCACCC+TGG 0.593618 4:+18796689 MsG0480019348.01.T01:CDS
GATGTTGCCTGAATCTGCAT+CGG 0.594676 4:-18800125 None:intergenic
CCATCATGGAAAGTGCAGCT+AGG 0.599561 4:+18800073 MsG0480019348.01.T01:CDS
GCCTCGAAGCTATCATGCAA+GGG 0.605569 4:+18796576 MsG0480019348.01.T01:CDS
TGCAAGAGACTCCGTCGTTG+CGG 0.606891 4:+18799380 MsG0480019348.01.T01:CDS
GAAGCTGTTGATAAAGCATG+TGG 0.618722 4:+18799318 MsG0480019348.01.T01:CDS
ATTATTACTAACCGCAACGA+CGG 0.620676 4:-18799391 None:intergenic
AAGACACTTACTGGGAGTCA+AGG 0.621054 4:+18800562 MsG0480019348.01.T01:CDS
GTACGAGGAGGAACTGTATG+TGG 0.622060 4:+18796793 MsG0480019348.01.T01:CDS
AGTTGAGAAAGACTGAATGA+TGG 0.626761 4:-18800154 None:intergenic
GTTCAAAGAGAGAACCGTAT+GGG 0.629967 4:+18799017 MsG0480019348.01.T01:CDS
TTCCTCCTCGTACCTGATGT+AGG 0.632540 4:-18796783 None:intergenic
AGTTCAAAGAGAGAACCGTA+TGG 0.633955 4:+18799016 MsG0480019348.01.T01:CDS
CAAAGAGAGAACCGTATGGG+TGG 0.637423 4:+18799020 MsG0480019348.01.T01:CDS
GTAGTAAAGAGCCACCCATA+CGG 0.639551 4:-18799031 None:intergenic
CTCTCCGAGATTACATCGAG+AGG 0.639646 4:+18796609 MsG0480019348.01.T01:CDS
AGCTCTAGACTGTGTTACAC+CGG 0.650454 4:+18800366 MsG0480019348.01.T01:CDS
CATCCTGAACAAATCCAGGA+AGG 0.659041 4:+18796817 MsG0480019348.01.T01:CDS
CTCTCGATGTAATCTCGGAG+AGG 0.665566 4:-18796608 None:intergenic
GAAATATTAAGACACTTACT+GGG 0.695568 4:+18800554 MsG0480019348.01.T01:CDS
GACCTACATCAGGTACGAGG+AGG 0.701614 4:+18796781 MsG0480019348.01.T01:CDS
CAAGACCTACATCAGGTACG+AGG 0.703864 4:+18796778 MsG0480019348.01.T01:CDS
TAACACAGTCTAGAGCTGCA+AGG 0.710102 4:-18800360 None:intergenic
AAAGACTGAATGATGGTCCG+GGG 0.721286 4:-18800147 None:intergenic
GTGCTCCAGATAGGGCAACG+AGG 0.748414 4:-18800216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAATAAATAAAATT+GGG - Chr4:18799178-18799197 None:intergenic 0.0%
!! AATAAAATAAATTTAATAAA+AGG + Chr4:18799493-18799512 MsG0480019348.01.T01:intron 0.0%
!!! AATTTTAAAAATAAAATTAT+TGG + Chr4:18797212-18797231 MsG0480019348.01.T01:intron 0.0%
!!! ATTTTAAAAATAAAATTATT+GGG + Chr4:18797213-18797232 MsG0480019348.01.T01:intron 0.0%
!! ATTTAATTCATAAGAAAATT+CGG - Chr4:18798369-18798388 None:intergenic 10.0%
!! GATAATAAAAATTTATTTGA+TGG + Chr4:18799796-18799815 MsG0480019348.01.T01:intron 10.0%
!!! ATTTTATATCTTAATCATTA+AGG + Chr4:18798480-18798499 MsG0480019348.01.T01:intron 10.0%
!!! TAGTTTAATTTTTTATTTGA+GGG - Chr4:18798312-18798331 None:intergenic 10.0%
!!! TTAGTTTAATTTTTTATTTG+AGG - Chr4:18798313-18798332 None:intergenic 10.0%
!!! TTATTTTTATTTTTTTGTGA+TGG + Chr4:18798135-18798154 MsG0480019348.01.T01:intron 10.0%
!! AACAATTAATAAACTAAGAA+TGG + Chr4:18798285-18798304 MsG0480019348.01.T01:intron 15.0%
!! AATTAAATTAAAGTGATGTT+GGG + Chr4:18798381-18798400 MsG0480019348.01.T01:intron 15.0%
!! CAAGACAAAAAATATATATA+TGG - Chr4:18797170-18797189 None:intergenic 15.0%
!! CTGAAATTTACAATTATATA+TGG + Chr4:18800035-18800054 MsG0480019348.01.T01:intron 15.0%
!! TAAATTTAATAAAAGGATGT+TGG + Chr4:18799500-18799519 MsG0480019348.01.T01:intron 15.0%
!! TTATTTATTGAGAAAACAAT+TGG - Chr4:18797837-18797856 None:intergenic 15.0%
!!! AAAGGATTGAAAAATTATTT+TGG - Chr4:18797927-18797946 None:intergenic 15.0%
!!! AGTTTAATTTTTTATTTGAG+GGG - Chr4:18798311-18798330 None:intergenic 15.0%
!!! ATTATGTGTTTTTTGTATTT+TGG + Chr4:18797672-18797691 MsG0480019348.01.T01:intron 15.0%
!!! TGAATTGATAATTTTAACAA+AGG + Chr4:18797966-18797985 MsG0480019348.01.T01:intron 15.0%
!!! TTATGTGTTTTTTGTATTTT+GGG + Chr4:18797673-18797692 MsG0480019348.01.T01:intron 15.0%
!!! TTATTTTTTATTGTGATTCA+GGG + Chr4:18799186-18799205 MsG0480019348.01.T01:intron 15.0%
!!! TTTATTTTTTATTGTGATTC+AGG + Chr4:18799185-18799204 MsG0480019348.01.T01:intron 15.0%
!!! TTTTAATGATTATTGATATG+TGG - Chr4:18798836-18798855 None:intergenic 15.0%
!! AAAATTATGTTAACTAGATC+AGG + Chr4:18799833-18799852 MsG0480019348.01.T01:intron 20.0%
!! AAGGAAATTAAAAGAAGTAA+AGG - Chr4:18797522-18797541 None:intergenic 20.0%
!! AATATATACACATCAATAGA+AGG - Chr4:18799917-18799936 None:intergenic 20.0%
!! GAATTAAATTAAAGTGATGT+TGG + Chr4:18798380-18798399 MsG0480019348.01.T01:intron 20.0%
!! GTAGTATATTATAAACAATG+TGG - Chr4:18798107-18798126 None:intergenic 20.0%
!! TTATTAAATGGTGATTATAC+TGG + Chr4:18800457-18800476 MsG0480019348.01.T01:CDS 20.0%
!! TTCCAATTAATATGGAAAAT+TGG + Chr4:18796971-18796990 MsG0480019348.01.T01:intron 20.0%
!! TTTCAATTAGTAAGGAAAAT+TGG + Chr4:18796895-18796914 MsG0480019348.01.T01:intron 20.0%
!!! AATTTTGATATATTCAGAGT+TGG - Chr4:18799568-18799587 None:intergenic 20.0%
!!! AATTTTTCAATCCTTTGTTT+TGG + Chr4:18797931-18797950 MsG0480019348.01.T01:intron 20.0%
!!! TATATATTTTTTGTCTTGTC+AGG + Chr4:18797172-18797191 MsG0480019348.01.T01:intron 20.0%
!!! TTGATGTGTATATATTGATT+TGG + Chr4:18799921-18799940 MsG0480019348.01.T01:intron 20.0%
!!! TTTATTTTTTTGTGATGGTT+GGG + Chr4:18798140-18798159 MsG0480019348.01.T01:intron 20.0%
!!! TTTTATTTTTTTGTGATGGT+TGG + Chr4:18798139-18798158 MsG0480019348.01.T01:intron 20.0%
! AAAATTGGAGAAAAAATCCA+AGG + Chr4:18796910-18796929 MsG0480019348.01.T01:intron 25.0%
! AATATAGTCAACTTTCATCA+AGG - Chr4:18798624-18798643 None:intergenic 25.0%
! AATTATATATGGATGCAGTT+AGG + Chr4:18800046-18800065 MsG0480019348.01.T01:intron 25.0%
! AGGAACTGATTAAAAAGAAA+GGG + Chr4:18800413-18800432 MsG0480019348.01.T01:CDS 25.0%
! GAAATATTAAGACACTTACT+GGG + Chr4:18800554-18800573 MsG0480019348.01.T01:CDS 25.0%
! GAGATATTAAGTAGAATACA+TGG - Chr4:18798432-18798451 None:intergenic 25.0%
! TGAGTTATTGGATATTAAAG+AGG - Chr4:18799970-18799989 None:intergenic 25.0%
! TTTATTGAGAAAACAATTGG+AGG - Chr4:18797834-18797853 None:intergenic 25.0%
!! ACATGTTTCTCAGTATTTTT+CGG - Chr4:18797299-18797318 None:intergenic 25.0%
!! ATCTACAAATTTGCTTGTAA+GGG - Chr4:18799153-18799172 None:intergenic 25.0%
!! CTCCAATTTTCCATATTAAT+TGG - Chr4:18796976-18796995 None:intergenic 25.0%
!! TATCTACAAATTTGCTTGTA+AGG - Chr4:18799154-18799173 None:intergenic 25.0%
!! TTGTTTGTGTTGTTAATGTA+TGG - Chr4:18798783-18798802 None:intergenic 25.0%
!!! ATTTTGCTCTTTTGAGTTAT+TGG - Chr4:18799982-18800001 None:intergenic 25.0%
!!! CATGTTGAACTTGTTTTTTA+TGG + Chr4:18797637-18797656 MsG0480019348.01.T01:intron 25.0%
!!! TTATTTTTTTGTGATGGTTG+GGG + Chr4:18798141-18798160 MsG0480019348.01.T01:intron 25.0%
!!! TTTTAGTTAGCGCTATTAAA+GGG + Chr4:18797396-18797415 MsG0480019348.01.T01:intron 25.0%
AAAACACTCATCCAAAACAA+AGG - Chr4:18797945-18797964 None:intergenic 30.0%
AAAATTGGAGAAAAATGCCA+AGG + Chr4:18796986-18797005 MsG0480019348.01.T01:intron 30.0%
AAACTAAGAATGAGTATGCT+AGG + Chr4:18798326-18798345 MsG0480019348.01.T01:intron 30.0%
AAGGAAGGTTTCAATTAGTA+AGG + Chr4:18796887-18796906 MsG0480019348.01.T01:intron 30.0%
AGATAGATTTGATCGAACTT+TGG + Chr4:18798039-18798058 MsG0480019348.01.T01:intron 30.0%
AGGACAATACTTATATTGCA+CGG - Chr4:18798069-18798088 None:intergenic 30.0%
AGTGAGTAATCAGATTGAAT+TGG + Chr4:18797706-18797725 MsG0480019348.01.T01:intron 30.0%
ATCAAAAATTTCGACAACCA+AGG + Chr4:18800178-18800197 MsG0480019348.01.T01:CDS 30.0%
ATTAGCAAGTTACACAACTT+TGG - Chr4:18799598-18799617 None:intergenic 30.0%
ATTTGATGTGTCATATTACC+AGG + Chr4:18800393-18800412 MsG0480019348.01.T01:CDS 30.0%
CAGGAACTGATTAAAAAGAA+AGG + Chr4:18800412-18800431 MsG0480019348.01.T01:CDS 30.0%
CTAAAGTAACTAACAAACCT+TGG - Chr4:18797006-18797025 None:intergenic 30.0%
GATATTAAAGAGGATTTCGT+AGG - Chr4:18799960-18799979 None:intergenic 30.0%
GCGAAATCTATGATTAAGAT+GGG + Chr4:18800532-18800551 MsG0480019348.01.T01:CDS 30.0%
GGAAATATTAAGACACTTAC+TGG + Chr4:18800553-18800572 MsG0480019348.01.T01:CDS 30.0%
GTGAAAAGAAACTTTCATCA+AGG - Chr4:18798667-18798686 None:intergenic 30.0%
TAATGTAACTGACAAAACCT+TGG - Chr4:18796930-18796949 None:intergenic 30.0%
TAATTATCCCCCCTTTAATA+GGG - Chr4:18797264-18797283 None:intergenic 30.0%
TAGTAAAAATGTCCTCACAT+AGG + Chr4:18798859-18798878 MsG0480019348.01.T01:intron 30.0%
TCGGATCAGGAATTATTAAA+TGG + Chr4:18800445-18800464 MsG0480019348.01.T01:CDS 30.0%
TGAAGTGATTGATGAGATTA+AGG + Chr4:18799296-18799315 MsG0480019348.01.T01:CDS 30.0%
TGCATAATATATGCAAAGTC+CGG - Chr4:18798175-18798194 None:intergenic 30.0%
TGCGAAATCTATGATTAAGA+TGG + Chr4:18800531-18800550 MsG0480019348.01.T01:CDS 30.0%
TGGCTAGTAAGGAAATTATT+GGG - Chr4:18798816-18798835 None:intergenic 30.0%
TGTTCTTGTCATTGTAGATT+CGG - Chr4:18800279-18800298 None:intergenic 30.0%
TTAATTATCCCCCCTTTAAT+AGG - Chr4:18797265-18797284 None:intergenic 30.0%
TTATGCATTGTTCATACCTA+TGG + Chr4:18798188-18798207 MsG0480019348.01.T01:intron 30.0%
TTATTGATATGTGGCTAGTA+AGG - Chr4:18798827-18798846 None:intergenic 30.0%
TTTGATATATTCAGAGTTGG+TGG - Chr4:18799565-18799584 None:intergenic 30.0%
! CTTTCTTTTTAATCAGTTCC+TGG - Chr4:18800414-18800433 None:intergenic 30.0%
! GATCGTTGGTTAGAAAATAT+AGG + Chr4:18800479-18800498 MsG0480019348.01.T01:CDS 30.0%
! GGTAAGAGTTAAGTTTTACT+CGG + Chr4:18799521-18799540 MsG0480019348.01.T01:intron 30.0%
! TATGACACATCAAATTTTGC+CGG - Chr4:18800388-18800407 None:intergenic 30.0%
! TTTTTGTCTTGTCAGGTTTT+TGG + Chr4:18797179-18797198 MsG0480019348.01.T01:intron 30.0%
!! CAAGGTTTGTTAGTTACTTT+AGG + Chr4:18797004-18797023 MsG0480019348.01.T01:intron 30.0%
!!! ACTTTCATCAAGGCATTTTT+TGG - Chr4:18798657-18798676 None:intergenic 30.0%
!!! CACAATGAGATACTTTTTCA+TGG - Chr4:18796675-18796694 None:intergenic 30.0%
!!! CTTTCATCAAGGCATTTTTT+GGG - Chr4:18798656-18798675 None:intergenic 30.0%
!!! GTGTTTTTTGTATTTTGGGA+TGG + Chr4:18797677-18797696 MsG0480019348.01.T01:intron 30.0%
!!! GTTTTAGTTAGCGCTATTAA+AGG + Chr4:18797395-18797414 MsG0480019348.01.T01:intron 30.0%
AAAGAAAGGGCTTCTTCATT+CGG + Chr4:18800426-18800445 MsG0480019348.01.T01:CDS 35.0%
AATTGGATGCTGTGATAGAT+TGG + Chr4:18797723-18797742 MsG0480019348.01.T01:intron 35.0%
AGTTGAGAAAGACTGAATGA+TGG - Chr4:18800157-18800176 None:intergenic 35.0%
ATCCAACAAAATGAACGCAA+AGG - Chr4:18797541-18797560 None:intergenic 35.0%
ATCTGACATGTCTCATATTG+TGG - Chr4:18798023-18798042 None:intergenic 35.0%
ATTATTACTAACCGCAACGA+CGG - Chr4:18799394-18799413 None:intergenic 35.0%
CAAGATCTCACTAAGTCAAA+TGG - Chr4:18797806-18797825 None:intergenic 35.0%
CATAATATATGCAAAGTCCG+GGG - Chr4:18798173-18798192 None:intergenic 35.0%
CATTGAGAAATACCTATGTG+AGG - Chr4:18798874-18798893 None:intergenic 35.0%
CCAAATATCAATTCAGCTAG+AGG + Chr4:18799270-18799289 MsG0480019348.01.T01:CDS 35.0%
CCTCTAGCTGAATTGATATT+TGG - Chr4:18799273-18799292 None:intergenic 35.0%
GCATAAAAATACCAAGTGAG+TGG - Chr4:18798717-18798736 None:intergenic 35.0%
GCATAATATATGCAAAGTCC+GGG - Chr4:18798174-18798193 None:intergenic 35.0%
GTATTTCTCAATGTTCTTCC+AGG + Chr4:18798881-18798900 MsG0480019348.01.T01:intron 35.0%
GTGAAATTCGTTCAAATTGC+AGG + Chr4:18800584-18800603 MsG0480019348.01.T01:CDS 35.0%
GTGGCTAGTAAGGAAATTAT+TGG - Chr4:18798817-18798836 None:intergenic 35.0%
TAAAAATACCAAGTGAGTGG+TGG - Chr4:18798714-18798733 None:intergenic 35.0%
TATATATGGATGCAGTTAGG+AGG + Chr4:18800049-18800068 MsG0480019348.01.T01:intron 35.0%
TGACTTAGTGAGATCTTGTA+TGG + Chr4:18797808-18797827 MsG0480019348.01.T01:intron 35.0%
TGTTCGTCTATGCAAGTAAT+CGG - Chr4:18798567-18798586 None:intergenic 35.0%
TGTTTCTTGTGCAGACATAT+TGG + Chr4:18799350-18799369 MsG0480019348.01.T01:CDS 35.0%
TTACTTGCATAGACGAACAT+TGG + Chr4:18798568-18798587 MsG0480019348.01.T01:intron 35.0%
TTGAACAGAATTAGTCAGCA+TGG + Chr4:18799449-18799468 MsG0480019348.01.T01:intron 35.0%
TTGGGAGGTTCCAATTAATA+TGG + Chr4:18796963-18796982 MsG0480019348.01.T01:intron 35.0%
TTTCCGAAAGCCCTATTAAA+GGG + Chr4:18797251-18797270 MsG0480019348.01.T01:intron 35.0%
! GAAAGTTTCTTTTCACGACA+TGG + Chr4:18798671-18798690 MsG0480019348.01.T01:intron 35.0%
! TAATAGTGCTCAGAGCATTA+GGG - Chr4:18798977-18798996 None:intergenic 35.0%
! TACTTGTTAGTTGCGAGATT+TGG + Chr4:18797771-18797790 MsG0480019348.01.T01:intron 35.0%
! TAGTGTTCTTCAAAGTGCTA+GGG - Chr4:18797611-18797630 None:intergenic 35.0%
! TTCACGACATGGTCAATTTT+AGG + Chr4:18798682-18798701 MsG0480019348.01.T01:intron 35.0%
! TTCCTTTGCGTTCATTTTGT+TGG + Chr4:18797536-18797555 MsG0480019348.01.T01:intron 35.0%
! TTTTCCGAAAGCCCTATTAA+AGG + Chr4:18797250-18797269 MsG0480019348.01.T01:intron 35.0%
!!! ACTTTTTTCATGTCTGTTCC+AGG - Chr4:18796710-18796729 None:intergenic 35.0%
!!! CTTTTTTCATGTCTGTTCCA+GGG - Chr4:18796709-18796728 None:intergenic 35.0%
!!! TGCATTTTTTTCACTGTCCA+TGG - Chr4:18799247-18799266 None:intergenic 35.0%
!!! TTTTTTTCACTGTCCATGGA+AGG - Chr4:18799243-18799262 None:intergenic 35.0%
AAAGAAGCTTTCCATGTTCG+AGG + Chr4:18796638-18796657 MsG0480019348.01.T01:CDS 40.0%
AAAGAGGATTTCGTAGGACT+TGG - Chr4:18799954-18799973 None:intergenic 40.0%
AATAGTGTGTGCTCCAGATA+GGG - Chr4:18800227-18800246 None:intergenic 40.0%
ACAGAATTAGTCAGCATGGT+TGG + Chr4:18799453-18799472 MsG0480019348.01.T01:intron 40.0%
ACATTAGAGTCATCGTTCGT+TGG + Chr4:18796944-18796963 MsG0480019348.01.T01:intron 40.0%
AGAAAGACTGAATGATGGTC+CGG - Chr4:18800152-18800171 None:intergenic 40.0%
AGTTCAAAGAGAGAACCGTA+TGG + Chr4:18799016-18799035 MsG0480019348.01.T01:CDS 40.0%
ATGTCTGCACAAGAAACAAC+TGG - Chr4:18799348-18799367 None:intergenic 40.0%
ATTGTGATTCAGGGTTGTGA+TGG + Chr4:18799195-18799214 MsG0480019348.01.T01:intron 40.0%
CATTAGAGTCATCGTTCGTT+GGG + Chr4:18796945-18796964 MsG0480019348.01.T01:intron 40.0%
GTCAACTTTCATCAAGGCAT+TGG - Chr4:18798618-18798637 None:intergenic 40.0%
GTTCAAAGAGAGAACCGTAT+GGG + Chr4:18799017-18799036 MsG0480019348.01.T01:CDS 40.0%
TGAAGACCAACAAACATGCA+TGG - Chr4:18799892-18799911 None:intergenic 40.0%
TGGTGATTATACTGGATCGT+TGG + Chr4:18800465-18800484 MsG0480019348.01.T01:CDS 40.0%
TGTGGTAGAGTCTAGCAAAA+AGG - Chr4:18798089-18798108 None:intergenic 40.0%
TTCCACGAGAAAAAGAAGGA+AGG + Chr4:18796872-18796891 MsG0480019348.01.T01:CDS 40.0%
TTCCGAAAGCCCTATTAAAG+GGG + Chr4:18797252-18797271 MsG0480019348.01.T01:intron 40.0%
! AACCTTCCTTCTTTTTCTCG+TGG - Chr4:18796877-18796896 None:intergenic 40.0%
! AGGAACACATTTAGAGTCCT+TGG - Chr4:18796749-18796768 None:intergenic 40.0%
! AGGGTTCTGACCTATAATAG+CGG + Chr4:18797415-18797434 MsG0480019348.01.T01:intron 40.0%
! CCACGATTGATTTAGTCAGT+GGG - Chr4:18798530-18798549 None:intergenic 40.0%
! CTAATAGTGCTCAGAGCATT+AGG - Chr4:18798978-18798997 None:intergenic 40.0%
! CTAGTGTTCTTCAAAGTGCT+AGG - Chr4:18797612-18797631 None:intergenic 40.0%
! GAAGCTGTTGATAAAGCATG+TGG + Chr4:18799318-18799337 MsG0480019348.01.T01:CDS 40.0%
! GGAACACATTTAGAGTCCTT+GGG - Chr4:18796748-18796767 None:intergenic 40.0%
! TCCACGATTGATTTAGTCAG+TGG - Chr4:18798531-18798550 None:intergenic 40.0%
! TGGAGTGTCTCTTAACTAGT+TGG - Chr4:18799872-18799891 None:intergenic 40.0%
! TTTCTCGTGGAAGAGCTTTT+TGG - Chr4:18796864-18796883 None:intergenic 40.0%
!! CAACGAGGTCTTTTTCGTTT+AGG - Chr4:18800204-18800223 None:intergenic 40.0%
!! TTTTTGGAAGATTCAGCAGC+AGG - Chr4:18796848-18796867 None:intergenic 40.0%
AAAGACTGAATGATGGTCCG+GGG - Chr4:18800150-18800169 None:intergenic 45.0%
AAGAAAGCCCCCGCTATTAT+AGG - Chr4:18797428-18797447 None:intergenic 45.0%
AAGACACTTACTGGGAGTCA+AGG + Chr4:18800562-18800581 MsG0480019348.01.T01:CDS 45.0%
AGATTGCCAAGACCTACATC+AGG + Chr4:18796771-18796790 MsG0480019348.01.T01:CDS 45.0%
ATTCATCAGCACCTCGAACA+TGG - Chr4:18796652-18796671 None:intergenic 45.0%
CAAGACATTTGTCCCAGAGA+AGG + Chr4:18800325-18800344 MsG0480019348.01.T01:CDS 45.0%
CAATAGTGTGTGCTCCAGAT+AGG - Chr4:18800228-18800247 None:intergenic 45.0%
CATCCTGAACAAATCCAGGA+AGG + Chr4:18796817-18796836 MsG0480019348.01.T01:CDS 45.0%
CGAACCTCTCGATGTAATCT+CGG - Chr4:18796616-18796635 None:intergenic 45.0%
GAAAGACTGAATGATGGTCC+GGG - Chr4:18800151-18800170 None:intergenic 45.0%
GACACTCCATGCATGTTTGT+TGG + Chr4:18799883-18799902 MsG0480019348.01.T01:intron 45.0%
GATGTTGCCTGAATCTGCAT+CGG - Chr4:18800128-18800147 None:intergenic 45.0%
GCTCTTCCACGAGAAAAAGA+AGG + Chr4:18796868-18796887 MsG0480019348.01.T01:CDS 45.0%
GTAGTAAAGAGCCACCCATA+CGG - Chr4:18799034-18799053 None:intergenic 45.0%
GTTCTGACCTATAATAGCGG+GGG + Chr4:18797418-18797437 MsG0480019348.01.T01:intron 45.0%
GTTCTTCCAGGCAATAGTGT+TGG + Chr4:18798893-18798912 MsG0480019348.01.T01:intron 45.0%
TCCGAAAGCCCTATTAAAGG+GGG + Chr4:18797253-18797272 MsG0480019348.01.T01:intron 45.0%
TCTAGACTCTACACCTTCCA+TGG + Chr4:18799227-18799246 MsG0480019348.01.T01:CDS 45.0%
TGGACATCCTGAACAAATCC+AGG + Chr4:18796813-18796832 MsG0480019348.01.T01:CDS 45.0%
TGTAGGTCTTGGCAATCTCT+AGG - Chr4:18796769-18796788 None:intergenic 45.0%
! CCCACTGACTAAATCAATCG+TGG + Chr4:18798527-18798546 MsG0480019348.01.T01:intron 45.0%
! CTATCTGGAGCACACACTAT+TGG + Chr4:18800226-18800245 MsG0480019348.01.T01:CDS 45.0%
! CTTCCTTCCTGGATTTGTTC+AGG - Chr4:18796823-18796842 None:intergenic 45.0%
! GGGTTCTGACCTATAATAGC+GGG + Chr4:18797416-18797435 MsG0480019348.01.T01:intron 45.0%
! GGTTCTGACCTATAATAGCG+GGG + Chr4:18797417-18797436 MsG0480019348.01.T01:intron 45.0%
! TAACACAGTCTAGAGCTGCA+AGG - Chr4:18800363-18800382 None:intergenic 45.0%
!! AGCTCTAGACTGTGTTACAC+CGG + Chr4:18800366-18800385 MsG0480019348.01.T01:CDS 45.0%
!! GGTCTTTTTCGTTTAGGCCT+TGG - Chr4:18800198-18800217 None:intergenic 45.0%
!! CAATAAAAAATAAATAAAAT+TGG - Chr4:18799179-18799198 None:intergenic 5.0%
AAAGACCTCGTTGCCCTATC+TGG + Chr4:18800211-18800230 MsG0480019348.01.T01:CDS 50.0%
AGGGCTTCTTCATTCGGATC+AGG + Chr4:18800432-18800451 MsG0480019348.01.T01:CDS 50.0%
ATTGTGAACGTTCTGCACCC+TGG + Chr4:18796689-18796708 MsG0480019348.01.T01:CDS 50.0%
CAAAGAGAGAACCGTATGGG+TGG + Chr4:18799020-18799039 MsG0480019348.01.T01:CDS 50.0%
CAAGACCTACATCAGGTACG+AGG + Chr4:18796778-18796797 MsG0480019348.01.T01:CDS 50.0%
CCCCCCTTTAATAGGGCTTT+CGG - Chr4:18797257-18797276 None:intergenic 50.0%
CCCCTTTCATAGCGTGCATT+CGG - Chr4:18797466-18797485 None:intergenic 50.0%
CCCGAATGCACGCTATGAAA+GGG + Chr4:18797462-18797481 MsG0480019348.01.T01:intron 50.0%
CCCTTTCATAGCGTGCATTC+GGG - Chr4:18797465-18797484 None:intergenic 50.0%
CCGAAAGCCCTATTAAAGGG+GGG + Chr4:18797254-18797273 MsG0480019348.01.T01:intron 50.0%
CCGAATGCACGCTATGAAAG+GGG + Chr4:18797463-18797482 MsG0480019348.01.T01:intron 50.0%
CCTAGCTGCACTTTCCATGA+TGG - Chr4:18800076-18800095 None:intergenic 50.0%
CTCGTACCTGATGTAGGTCT+TGG - Chr4:18796780-18796799 None:intergenic 50.0%
CTCTCCGAGATTACATCGAG+AGG + Chr4:18796609-18796628 MsG0480019348.01.T01:CDS 50.0%
CTCTCGATGTAATCTCGGAG+AGG - Chr4:18796611-18796630 None:intergenic 50.0%
GACATTTGTCCCAGAGAAGG+AGG + Chr4:18800328-18800347 MsG0480019348.01.T01:CDS 50.0%
GAGTCCTTGGGAGATCAAGA+TGG - Chr4:18796736-18796755 None:intergenic 50.0%
GCCTCGAAGCTATCATGCAA+GGG + Chr4:18796576-18796595 MsG0480019348.01.T01:CDS 50.0%
GTACGAGGAGGAACTGTATG+TGG + Chr4:18796793-18796812 MsG0480019348.01.T01:CDS 50.0%
TAGAGTCATCGTTCGTTGGG+AGG + Chr4:18796948-18796967 MsG0480019348.01.T01:intron 50.0%
TCCCTTGCATGATAGCTTCG+AGG - Chr4:18796580-18796599 None:intergenic 50.0%
TCGTCCATCTTGATCTCCCA+AGG + Chr4:18796729-18796748 MsG0480019348.01.T01:CDS 50.0%
TCTCGTGAGCTTAGCTCCAT+AGG - Chr4:18798207-18798226 None:intergenic 50.0%
TGCAGTTAGGAGGACCATCA+TGG + Chr4:18800059-18800078 MsG0480019348.01.T01:intron 50.0%
TGCCTCGAAGCTATCATGCA+AGG + Chr4:18796575-18796594 MsG0480019348.01.T01:CDS 50.0%
TTCCTCCTCGTACCTGATGT+AGG - Chr4:18796786-18796805 None:intergenic 50.0%
TTGGAGTCTCCTCCTTCTCT+GGG - Chr4:18800340-18800359 None:intergenic 50.0%
! ACAGTCTAGAGCTGCAAGGT+TGG - Chr4:18800359-18800378 None:intergenic 50.0%
! CCATCATGGAAAGTGCAGCT+AGG + Chr4:18800073-18800092 MsG0480019348.01.T01:CDS 50.0%
!! TACCAAGTGAGTGGTGGACT+AGG - Chr4:18798708-18798727 None:intergenic 50.0%
GACCTACATCAGGTACGAGG+AGG + Chr4:18796781-18796800 MsG0480019348.01.T01:CDS 55.0%
GAGCTGCCAACACTATTGCC+TGG - Chr4:18798902-18798921 None:intergenic 55.0%
GCAGATTCAGGCAACATCCC+CGG + Chr4:18800130-18800149 MsG0480019348.01.T01:CDS 55.0%
GCCCGAATGCACGCTATGAA+AGG + Chr4:18797461-18797480 MsG0480019348.01.T01:intron 55.0%
GTTGGAGTCTCCTCCTTCTC+TGG - Chr4:18800341-18800360 None:intergenic 55.0%
TGCAAGAGACTCCGTCGTTG+CGG + Chr4:18799380-18799399 MsG0480019348.01.T01:CDS 55.0%
! AGTCGTGCCGATGCAGATTC+AGG + Chr4:18800118-18800137 MsG0480019348.01.T01:CDS 55.0%
AGCAGCAGGCTCTTCCTTCC+TGG - Chr4:18796834-18796853 None:intergenic 60.0%
GATGGTTGGGGTTCGAACCC+CGG + Chr4:18798153-18798172 MsG0480019348.01.T01:intron 60.0%
GGCCTAGTCCACCACTCACT+TGG + Chr4:18798703-18798722 MsG0480019348.01.T01:intron 60.0%
GTGCTCCAGATAGGGCAACG+AGG - Chr4:18800219-18800238 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 18796569 18800618 18796569 ID=MsG0480019348.01;Name=MsG0480019348.01
Chr4 mRNA 18796569 18800618 18796569 ID=MsG0480019348.01.T01;Parent=MsG0480019348.01;Name=MsG0480019348.01.T01;_AED=0.27;_eAED=0.27;_QI=0|0|0|0.8|1|1|5|0|432
Chr4 exon 18796569 18796903 18796569 ID=MsG0480019348.01.T01:exon:6319;Parent=MsG0480019348.01.T01
Chr4 exon 18797781 18797814 18797781 ID=MsG0480019348.01.T01:exon:6320;Parent=MsG0480019348.01.T01
Chr4 exon 18798903 18799082 18798903 ID=MsG0480019348.01.T01:exon:6321;Parent=MsG0480019348.01.T01
Chr4 exon 18799207 18799401 18799207 ID=MsG0480019348.01.T01:exon:6322;Parent=MsG0480019348.01.T01
Chr4 exon 18800064 18800618 18800064 ID=MsG0480019348.01.T01:exon:6323;Parent=MsG0480019348.01.T01
Chr4 CDS 18796569 18796903 18796569 ID=MsG0480019348.01.T01:cds;Parent=MsG0480019348.01.T01
Chr4 CDS 18797781 18797814 18797781 ID=MsG0480019348.01.T01:cds;Parent=MsG0480019348.01.T01
Chr4 CDS 18798903 18799082 18798903 ID=MsG0480019348.01.T01:cds;Parent=MsG0480019348.01.T01
Chr4 CDS 18799207 18799401 18799207 ID=MsG0480019348.01.T01:cds;Parent=MsG0480019348.01.T01
Chr4 CDS 18800064 18800618 18800064 ID=MsG0480019348.01.T01:cds;Parent=MsG0480019348.01.T01
Gene Sequence

>MsG0480019348.01.T01

ATGGCGTGCCTCGAAGCTATCATGCAAGGGAAGAATGAGCCTCTCCGAGATTACATCGAGAGGTTCGACAAAGAAGCTTTCCATGTTCGAGGTGCTGATGAATCCATGAAAAAGTATCTCATTGTGAACGTTCTGCACCCTGGAACAGACATGAAAAAAGTCGTCCATCTTGATCTCCCAAGGACTCTAAATGTGTTCCTAGAGATTGCCAAGACCTACATCAGGTACGAGGAGGAACTGTATGTGGACATCCTGAACAAATCCAGGAAGGAAGAGCCTGCTGCTGAATCTTCCAAAAAGCTCTTCCACGAGAAAAAGAAGGAAGGTTTCAATTATTGCGAGATTTGGAGCAATTTGCCATTTGACTTAGCAATAGTGTTGGCAGCTCTTGCAACAACAACATTTTCAGCACTCACAACAAATTACTATGATTACACATGCCCTAATGCTCTGAGCACTATTAGAAATGTTGTTGAAGCTGCAGTTCAAAGAGAGAACCGTATGGGTGGCTCTTTACTACGCTTGCATTTTCATGATTGCTTTGTTAACGGTTGTGATGGTTCACTTCTTCTAGACTCTACACCTTCCATGGACAGTGAAAAAAATGCAAATCCAAATATCAATTCAGCTAGAGGATTTGAAGTGATTGATGAGATTAAGGAAGCTGTTGATAAAGCATGTGGAAAACCAGTTGTTTCTTGTGCAGACATATTGGCTGTAGCTGCAAGAGACTCCGTCGTTGCGTTAGGAGGACCATCATGGAAAGTGCAGCTAGGAAGAAGAGACTCAAAGACAGCAAGTCGTGCCGATGCAGATTCAGGCAACATCCCCGGACCATCATTCAGTCTTTCTCAACTCATCAAAAATTTCGACAACCAAGGCCTAAACGAAAAAGACCTCGTTGCCCTATCTGGAGCACACACTATTGGATTTTCGCGCTGTCTTTTATTTAGAGACCGAATCTACAATGACAAGAACATCGATGCAAACTTCGCAAAACAGCTTCAAGACATTTGTCCCAGAGAAGGAGGAGACTCCAACCTTGCAGCTCTAGACTGTGTTACACCGGCAAAATTTGATGTGTCATATTACCAGGAACTGATTAAAAAGAAAGGGCTTCTTCATTCGGATCAGGAATTATTAAATGGTGATTATACTGGATCGTTGGTTAGAAAATATAGGCGCGATACAAGTTCTTTCTACAACGACTTTGCGAAATCTATGATTAAGATGGGAAATATTAAGACACTTACTGGGAGTCAAGGTGAAATTCGTTCAAATTGCAGGAGAGCCAATTAA

Protein sequence

>MsG0480019348.01.T01

MACLEAIMQGKNEPLRDYIERFDKEAFHVRGADESMKKYLIVNVLHPGTDMKKVVHLDLPRTLNVFLEIAKTYIRYEEELYVDILNKSRKEEPAAESSKKLFHEKKKEGFNYCEIWSNLPFDLAIVLAALATTTFSALTTNYYDYTCPNALSTIRNVVEAAVQRENRMGGSLLRLHFHDCFVNGCDGSLLLDSTPSMDSEKNANPNINSARGFEVIDEIKEAVDKACGKPVVSCADILAVAARDSVVALGGPSWKVQLGRRDSKTASRADADSGNIPGPSFSLSQLIKNFDNQGLNEKDLVALSGAHTIGFSRCLLFRDRIYNDKNIDANFAKQLQDICPREGGDSNLAALDCVTPAKFDVSYYQELIKKKGLLHSDQELLNGDYTGSLVRKYRRDTSSFYNDFAKSMIKMGNIKTLTGSQGEIRSNCRRAN*