AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021133.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021133.01.T01 MTR_4g066640 79.377 514 25 2 31 463 1 514 0.0 805
MsG0480021133.01.T01 MTR_4g066580 56.202 516 141 4 31 462 1 515 0.0 580
MsG0480021133.01.T01 MTR_2g098540 57.228 505 126 7 44 462 7 507 0.0 568
MsG0480021133.01.T01 MTR_3g028720 55.578 502 138 4 45 462 14 514 0.0 566
MsG0480021133.01.T01 MTR_2g098520 57.495 487 122 4 60 462 25 510 0.0 565
MsG0480021133.01.T01 MTR_4g066630 55.242 496 135 5 51 460 19 513 0.0 552
MsG0480021133.01.T01 MTR_4g066640 73.522 389 22 2 31 338 1 389 0.0 552
MsG0480021133.01.T01 MTR_2g098540 63.549 417 110 3 87 462 48 463 0.0 551
MsG0480021133.01.T01 MTR_6g078450 53.922 510 149 5 38 462 4 512 0.0 550
MsG0480021133.01.T01 MTR_4g066590 54.781 502 139 6 45 460 8 507 0.0 550
MsG0480021133.01.T01 MTR_2g098790 53.606 513 150 6 37 462 3 514 0.0 548
MsG0480021133.01.T01 MTR_6g078330 52.408 519 151 7 34 462 1 513 0.0 533
MsG0480021133.01.T01 MTR_4g066340 61.190 420 121 4 85 463 22 440 0.0 530
MsG0480021133.01.T01 MTR_6g078380 53.516 512 151 5 37 462 3 513 0.0 525
MsG0480021133.01.T01 MTR_4g066240 50.881 511 166 5 37 463 4 513 0.0 522
MsG0480021133.01.T01 MTR_4g066210 52.727 495 146 6 56 463 27 520 0.0 521
MsG0480021133.01.T01 MTR_4g066240 50.781 512 166 6 37 463 4 514 0.0 517
MsG0480021133.01.T01 MTR_6g078330 59.512 410 124 3 94 462 1 409 0.0 513
MsG0480021133.01.T01 MTR_4g066330 52.096 501 133 4 45 462 17 493 1.17e-177 507
MsG0480021133.01.T01 MTR_4g066280 49.701 501 145 4 46 463 18 494 4.86e-174 498
MsG0480021133.01.T01 MTR_5g071520 50.760 526 163 7 31 462 1 524 9.47e-173 495
MsG0480021133.01.T01 MTR_3g028720 55.034 447 116 4 45 407 14 459 2.09e-172 492
MsG0480021133.01.T01 MTR_6g078330 56.691 411 134 4 93 462 2 409 1.67e-169 483
MsG0480021133.01.T01 MTR_4g066630 53.846 442 117 5 51 406 19 459 2.16e-166 477
MsG0480021133.01.T01 MTR_6g078450 52.620 458 125 7 38 407 4 457 3.65e-163 469
MsG0480021133.01.T01 MTR_4g015420 45.471 541 168 9 15 462 19 525 1.90e-156 454
MsG0480021133.01.T01 MTR_4g066580 54.312 429 111 4 31 375 1 428 4.72e-156 449
MsG0480021133.01.T01 MTR_3g028720 54.722 413 102 4 45 373 14 425 7.57e-153 441
MsG0480021133.01.T01 MTR_3g026400 46.004 513 189 8 34 462 1 509 2.70e-150 438
MsG0480021133.01.T01 MTR_3g026280 47.908 478 161 6 68 462 21 493 3.17e-150 437
MsG0480021133.01.T01 MTR_4g023000 46.541 477 168 5 68 462 23 494 2.11e-147 430
MsG0480021133.01.T01 MTR_3g026400 52.048 415 157 5 87 462 67 478 2.86e-147 429
MsG0480021133.01.T01 MTR_4g066630 53.071 407 104 5 51 371 19 424 1.68e-146 426
MsG0480021133.01.T01 MTR_4g015460 46.365 509 157 9 46 463 19 502 2.29e-145 425
MsG0480021133.01.T01 MTR_2g043200 48.810 420 146 5 87 462 125 519 4.22e-140 412
MsG0480021133.01.T01 MTR_4g083000 42.574 505 197 8 42 461 6 502 7.47e-138 406
MsG0480021133.01.T01 MTR_4g067040 52.030 394 104 4 50 359 15 407 1.70e-137 401
MsG0480021133.01.T01 MTR_4g066240 47.971 419 133 5 37 371 4 421 1.36e-134 395
MsG0480021133.01.T01 MTR_3g026620 43.385 514 205 6 31 462 1 510 1.11e-133 395
MsG0480021133.01.T01 MTR_4g083000 47.689 411 169 5 94 461 1 408 2.38e-132 388
MsG0480021133.01.T01 MTR_3g028720 58.589 326 88 3 45 324 14 338 7.43e-131 384
MsG0480021133.01.T01 MTR_4g067040 58.385 322 87 3 50 325 15 335 3.15e-130 382
MsG0480021133.01.T01 MTR_5g044000 47.608 418 172 6 87 460 106 520 1.65e-129 385
MsG0480021133.01.T01 MTR_4g066630 57.895 323 87 4 51 325 19 340 2.10e-128 377
MsG0480021133.01.T01 MTR_0110s0040 41.223 507 206 9 40 462 14 512 1.45e-122 367
MsG0480021133.01.T01 MTR_6g078330 53.936 343 100 6 34 324 1 337 2.78e-121 359
MsG0480021133.01.T01 MTR_0110s0030 40.198 505 214 8 40 462 14 512 6.06e-120 360
MsG0480021133.01.T01 MTR_4g081530 39.526 506 213 7 42 461 1 499 7.51e-120 360
MsG0480021133.01.T01 MTR_3g033810 40.126 476 195 8 66 461 18 483 1.69e-115 348
MsG0480021133.01.T01 MTR_4g131810 42.105 418 195 5 87 460 89 503 1.15e-113 344
MsG0480021133.01.T01 MTR_3g033790 38.559 472 201 7 69 461 19 480 5.57e-112 339
MsG0480021133.01.T01 MTR_2g022760 43.675 419 191 6 87 463 97 512 6.03e-111 337
MsG0480021133.01.T01 MTR_2g022760 43.689 412 187 6 94 463 1 409 4.75e-109 329
MsG0480021133.01.T01 MTR_0108s0030 40.132 456 201 5 71 463 5 451 5.38e-108 328
MsG0480021133.01.T01 MTR_5g068740 39.157 498 210 11 43 461 6 489 4.14e-107 327
MsG0480021133.01.T01 MTR_1g088610 39.839 497 207 10 43 461 6 488 7.34e-106 328
MsG0480021133.01.T01 MTR_1g088610 39.316 117 64 2 346 461 503 613 1.10e-16 83.2
MsG0480021133.01.T01 MTR_4g131800 42.959 419 194 5 87 463 576 991 2.61e-105 336
MsG0480021133.01.T01 MTR_3g026400 49.704 338 119 6 34 324 1 334 6.84e-105 317
MsG0480021133.01.T01 MTR_2g022710 36.595 511 235 7 37 463 5 510 7.46e-104 319
MsG0480021133.01.T01 MTR_7g068910 38.316 475 204 10 68 462 30 495 2.76e-103 318
MsG0480021133.01.T01 MTR_7g033860 37.917 480 196 8 71 463 50 514 8.40e-103 316
MsG0480021133.01.T01 MTR_7g068910 37.526 485 204 10 68 462 30 505 7.38e-102 314
MsG0480021133.01.T01 MTR_2g079550 36.420 486 222 7 58 460 20 501 2.44e-101 313
MsG0480021133.01.T01 MTR_2g079580 34.843 508 238 7 36 460 6 503 2.80e-101 313
MsG0480021133.01.T01 MTR_2g022710 39.806 412 203 5 94 463 1 409 3.43e-99 304
MsG0480021133.01.T01 MTR_7g068900 41.019 412 195 9 89 461 17 419 3.99e-99 306
MsG0480021133.01.T01 MTR_4g016920 41.019 412 196 7 87 460 87 489 9.90e-98 303
MsG0480021133.01.T01 MTR_4g016920 41.500 400 187 7 99 460 6 396 3.79e-96 296
MsG0480021133.01.T01 MTR_7g051650 38.578 464 201 6 70 460 76 528 1.05e-93 293
MsG0480021133.01.T01 MTR_7g051650 38.248 468 201 6 70 460 76 532 5.24e-93 292
MsG0480021133.01.T01 MTR_1g088630 41.162 413 172 9 87 461 53 432 7.69e-93 289
MsG0480021133.01.T01 MTR_7g051510 36.966 468 212 5 70 463 76 534 1.24e-89 283
MsG0480021133.01.T01 MTR_7g051610 37.179 468 211 5 70 463 76 534 3.14e-89 282
MsG0480021133.01.T01 MTR_0110s0040 44.713 331 132 6 40 324 14 339 5.97e-87 272
MsG0480021133.01.T01 MTR_7g056747 40.150 401 206 6 88 463 9 400 1.29e-85 268
MsG0480021133.01.T01 MTR_2g022710 34.945 455 208 6 37 407 5 455 9.81e-83 263
MsG0480021133.01.T01 MTR_2g022710 34.945 455 208 6 37 407 5 455 1.48e-82 263
MsG0480021133.01.T01 MTR_2g079580 35.084 419 180 6 36 371 6 415 1.04e-80 256
MsG0480021133.01.T01 MTR_2g022710 36.277 419 179 6 37 371 5 419 1.52e-80 256
MsG0480021133.01.T01 MTR_4g016920 52.838 229 102 3 99 324 6 231 1.58e-77 244
MsG0480021133.01.T01 MTR_2g022710 35.381 407 175 6 37 359 5 407 1.25e-74 240
MsG0480021133.01.T01 MTR_1g088630 43.189 301 100 5 68 324 26 299 5.71e-73 234
MsG0480021133.01.T01 MTR_2g022710 40.798 326 145 5 37 318 5 326 3.89e-71 231
MsG0480021133.01.T01 MTR_1g088630 44.569 267 101 4 68 290 26 289 8.84e-69 221
MsG0480021133.01.T01 MTR_0110s0020 39.552 268 116 3 40 263 14 279 5.85e-60 199
MsG0480021133.01.T01 MTR_5g069350 39.873 158 48 6 319 462 65 189 7.03e-23 96.3
MsG0480021133.01.T01 MTR_4g122980 27.614 373 229 11 90 452 183 524 9.72e-23 101
MsG0480021133.01.T01 MTR_8g038650 46.053 76 40 1 249 324 57 131 1.41e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021133.01.T01 AT5G42260 46.215 502 176 8 39 456 6 497 3.23e-149 435
MsG0480021133.01.T01 AT5G44640 45.437 515 182 9 36 463 5 507 4.47e-149 434
MsG0480021133.01.T01 AT2G44450 46.584 483 166 6 61 460 27 500 2.12e-146 428
MsG0480021133.01.T01 AT2G44480 44.538 476 180 4 68 460 34 508 1.74e-141 416
MsG0480021133.01.T01 AT2G44480 44.538 476 180 4 68 460 65 539 6.53e-141 415
MsG0480021133.01.T01 AT3G60130 45.493 477 171 7 69 461 30 501 2.39e-139 410
MsG0480021133.01.T01 AT3G60130 49.880 415 162 6 88 461 40 449 3.93e-139 407
MsG0480021133.01.T01 AT2G44480 47.666 407 172 3 94 460 1 406 6.08e-137 400
MsG0480021133.01.T01 AT2G25630 44.106 492 195 9 36 460 5 483 4.27e-134 395
MsG0480021133.01.T01 AT3G60140 41.580 481 196 5 68 463 25 505 1.05e-132 395
MsG0480021133.01.T01 AT3G60130 48.675 415 156 7 88 461 40 438 5.58e-131 386
MsG0480021133.01.T01 AT1G26560 43.750 480 181 7 67 460 30 506 8.50e-131 388
MsG0480021133.01.T01 AT3G60120 42.917 480 188 6 68 462 13 491 2.61e-129 385
MsG0480021133.01.T01 AT5G24550 44.656 421 189 4 87 463 92 512 4.02e-129 385
MsG0480021133.01.T01 AT1G51470 42.553 470 191 6 69 462 45 511 8.92e-128 380
MsG0480021133.01.T01 AT3G18080 43.064 483 186 8 64 463 34 510 1.80e-127 380
MsG0480021133.01.T01 AT1G47600 42.128 470 193 5 69 462 45 511 3.31e-127 379
MsG0480021133.01.T01 AT1G47600 41.915 470 193 5 69 462 45 510 5.51e-127 378
MsG0480021133.01.T01 AT5G24540 40.625 512 212 6 39 463 6 512 4.07e-124 372
MsG0480021133.01.T01 AT2G44490 41.545 479 191 6 71 461 16 493 2.02e-122 368
MsG0480021133.01.T01 AT5G25980 40.000 520 217 11 30 461 11 523 2.77e-121 365
MsG0480021133.01.T01 AT5G54570 40.000 480 198 6 68 460 29 505 3.46e-121 364
MsG0480021133.01.T01 AT5G54570 43.796 411 184 5 94 460 1 408 8.92e-119 355
MsG0480021133.01.T01 AT2G44470 38.320 488 216 5 60 462 20 507 1.24e-118 360
MsG0480021133.01.T01 AT3G18070 39.918 486 195 8 61 463 22 493 7.03e-118 354
MsG0480021133.01.T01 AT3G18070 40.123 486 200 8 61 463 22 499 8.83e-117 352
MsG0480021133.01.T01 AT2G44450 49.435 354 134 4 147 460 1 349 2.32e-116 345
MsG0480021133.01.T01 AT2G32860 43.914 419 192 4 85 460 153 571 4.08e-116 354
MsG0480021133.01.T01 AT2G32860 44.391 419 189 6 85 460 153 570 4.33e-116 353
MsG0480021133.01.T01 AT2G44460 38.294 504 224 7 42 460 3 504 7.56e-115 350
MsG0480021133.01.T01 AT5G26000 44.737 418 184 7 87 460 97 511 2.78e-114 347
MsG0480021133.01.T01 AT5G36890 43.133 415 186 6 87 461 76 480 2.56e-113 342
MsG0480021133.01.T01 AT1G02850 40.938 469 191 8 70 461 27 486 2.70e-113 343
MsG0480021133.01.T01 AT5G36890 43.133 415 186 6 87 461 76 480 3.12e-113 342
MsG0480021133.01.T01 AT1G75940 43.365 422 190 8 87 460 97 517 6.89e-111 338
MsG0480021133.01.T01 AT3G09260 38.622 479 208 6 69 462 35 512 1.90e-110 336
MsG0480021133.01.T01 AT3G03640 42.280 421 197 6 87 462 95 514 3.55e-110 336
MsG0480021133.01.T01 AT1G02850 39.228 492 190 9 70 461 27 509 1.16e-108 332
MsG0480021133.01.T01 AT3G21370 38.095 483 206 8 69 461 33 512 5.23e-107 328
MsG0480021133.01.T01 AT1G02850 39.351 493 189 10 70 461 27 510 6.01e-107 327
MsG0480021133.01.T01 AT5G25980 39.224 464 189 9 30 407 11 467 3.09e-106 323
MsG0480021133.01.T01 AT5G25980 39.224 464 189 9 30 407 11 467 3.09e-106 323
MsG0480021133.01.T01 AT1G66270 37.626 497 215 8 58 462 19 512 6.64e-106 325
MsG0480021133.01.T01 AT1G61820 42.143 420 197 6 87 463 91 507 8.83e-106 324
MsG0480021133.01.T01 AT1G66280 37.475 499 221 9 50 460 15 510 3.41e-105 323
MsG0480021133.01.T01 AT1G66270 37.425 497 214 9 58 462 19 510 1.42e-103 318
MsG0480021133.01.T01 AT5G28510 35.603 514 238 8 37 460 9 519 1.42e-103 319
MsG0480021133.01.T01 AT4G21760 39.663 416 201 6 87 460 114 521 8.17e-103 317
MsG0480021133.01.T01 AT1G02850 39.019 469 173 8 70 461 27 459 3.97e-102 313
MsG0480021133.01.T01 AT1G52400 40.855 421 200 6 87 461 99 516 5.05e-102 315
MsG0480021133.01.T01 AT1G52400 40.855 421 200 6 87 461 99 516 5.05e-102 315
MsG0480021133.01.T01 AT2G44480 51.163 301 101 3 68 323 65 364 7.10e-102 310
MsG0480021133.01.T01 AT5G54570 38.967 426 171 5 68 407 29 451 7.36e-102 312
MsG0480021133.01.T01 AT5G24540 38.987 454 186 5 39 406 6 454 3.84e-101 310
MsG0480021133.01.T01 AT4G27830 37.053 475 211 9 65 460 19 484 8.80e-100 308
MsG0480021133.01.T01 AT2G44470 37.587 431 185 4 60 406 20 450 1.40e-99 306
MsG0480021133.01.T01 AT5G26000 44.353 363 157 5 87 407 97 456 1.46e-99 306
MsG0480021133.01.T01 AT4G22100 40.363 441 211 9 62 463 58 485 2.40e-99 307
MsG0480021133.01.T01 AT4G21760 40.488 410 196 9 87 460 114 511 3.70e-99 308
MsG0480021133.01.T01 AT1G60090 37.576 495 220 12 41 461 4 483 5.59e-99 306
MsG0480021133.01.T01 AT3G60140 39.796 392 152 4 68 375 25 416 2.50e-98 303
MsG0480021133.01.T01 AT1G61810 37.630 481 211 7 69 463 33 510 1.15e-97 303
MsG0480021133.01.T01 AT4G27820 38.806 469 201 9 69 460 23 482 1.20e-97 303
MsG0480021133.01.T01 AT1G60090 36.948 498 226 12 41 461 4 490 5.17e-97 301
MsG0480021133.01.T01 AT1G45191 38.961 462 205 10 70 461 30 484 1.35e-96 300
MsG0480021133.01.T01 AT1G61810 41.176 408 194 6 99 463 6 410 4.29e-96 296
MsG0480021133.01.T01 AT4G27830 40.000 405 196 8 94 460 1 396 4.43e-96 296
MsG0480021133.01.T01 AT1G45191 37.421 473 208 9 70 461 30 495 2.78e-94 295
MsG0480021133.01.T01 AT1G45191 37.821 468 208 9 70 461 30 490 1.05e-93 293
MsG0480021133.01.T01 AT4G27820 41.646 401 186 8 99 460 6 397 2.86e-93 289
MsG0480021133.01.T01 AT4G27820 41.646 401 186 8 99 460 6 397 2.86e-93 289
MsG0480021133.01.T01 AT1G45191 38.739 444 219 9 64 461 71 507 1.46e-92 290
MsG0480021133.01.T01 AT1G61810 37.118 458 200 6 69 440 33 488 1.70e-90 285
MsG0480021133.01.T01 AT3G18070 38.063 444 191 10 61 463 22 422 4.09e-90 281
MsG0480021133.01.T01 AT2G44460 42.618 359 162 5 145 460 1 358 6.98e-90 280
MsG0480021133.01.T01 AT1G61820 40.984 366 171 5 141 463 5 368 6.10e-88 273
MsG0480021133.01.T01 AT5G48375 41.470 381 128 8 85 425 86 411 1.18e-87 275
MsG0480021133.01.T01 AT3G62750 35.181 469 215 10 66 460 20 473 1.33e-87 276
MsG0480021133.01.T01 AT3G62750 35.181 469 215 10 66 460 46 499 3.67e-87 276
MsG0480021133.01.T01 AT3G62740 34.591 477 228 9 58 460 12 478 2.09e-86 273
MsG0480021133.01.T01 AT1G02850 39.152 401 142 7 70 371 27 424 9.29e-85 267
MsG0480021133.01.T01 AT1G52400 40.274 365 170 5 87 406 99 460 1.68e-83 265
MsG0480021133.01.T01 AT2G44470 41.290 310 137 2 60 324 20 329 6.97e-83 261
MsG0480021133.01.T01 AT3G62750 37.221 403 202 9 94 460 1 388 1.76e-82 261
MsG0480021133.01.T01 AT3G62750 37.221 403 202 9 94 460 1 388 1.76e-82 261
MsG0480021133.01.T01 AT3G18070 42.675 314 135 5 191 463 1 310 4.93e-80 251
MsG0480021133.01.T01 AT2G44480 42.574 303 133 3 198 460 1 302 5.49e-80 251
MsG0480021133.01.T01 AT3G18070 42.532 308 128 5 61 324 22 324 3.88e-75 241
MsG0480021133.01.T01 AT1G60270 40.923 325 143 6 41 324 1 317 1.01e-74 239
MsG0480021133.01.T01 AT1G45191 42.712 295 126 4 70 324 30 321 5.72e-74 238
MsG0480021133.01.T01 AT1G45191 42.712 295 126 4 70 324 30 321 5.97e-74 239
MsG0480021133.01.T01 AT1G51490 50.407 246 100 7 87 324 78 309 2.85e-73 237
MsG0480021133.01.T01 AT1G60270 48.918 231 113 3 96 324 3 230 4.73e-72 229
MsG0480021133.01.T01 AT1G61810 36.504 389 159 6 69 371 33 419 6.37e-72 234
MsG0480021133.01.T01 AT3G62740 33.886 422 196 8 58 406 12 423 2.66e-70 229
MsG0480021133.01.T01 AT3G62750 33.806 423 192 9 66 415 46 453 3.53e-70 230
MsG0480021133.01.T01 AT3G62750 38.721 297 135 5 66 324 20 307 7.76e-66 216
MsG0480021133.01.T01 AT3G62750 38.721 297 135 5 66 324 20 307 7.76e-66 216
MsG0480021133.01.T01 AT3G62750 38.721 297 135 5 66 324 46 333 5.11e-65 216
MsG0480021133.01.T01 AT1G61810 42.593 270 108 4 69 293 33 300 5.22e-63 207
MsG0480021133.01.T01 AT3G18070 35.876 354 146 8 61 373 22 335 8.29e-60 199
MsG0480021133.01.T01 AT3G18070 41.256 223 89 3 191 372 1 222 9.54e-50 169
MsG0480021133.01.T01 AT5G16580 36.201 279 139 4 172 417 27 299 6.94e-44 156
MsG0480021133.01.T01 AT3G06510 25.980 408 253 14 85 461 155 544 8.40e-23 102
MsG0480021133.01.T01 AT3G06510 25.389 386 249 11 85 461 155 510 8.94e-23 102

Find 110 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTTTATTTCAGGTTTA+TGG 0.080477 4:-54135437 MsG0480021133.01.T01:intron
GATCTTTGCTTCAAGGAATT+TGG 0.146195 4:-54136327 MsG0480021133.01.T01:CDS
TAGCCAATGAATACCATATT+TGG 0.163685 4:+54140728 None:intergenic
AGATCACTTGATTTCCAATT+TGG 0.198633 4:-54135865 MsG0480021133.01.T01:CDS
AAAGAAATTTACCTGATATT+TGG 0.203653 4:+54136113 None:intergenic
TGATTATGTGTAACTATATA+AGG 0.212347 4:+54136174 None:intergenic
ACATGTTTGGGTGGTAATTC+TGG 0.227903 4:-54136204 MsG0480021133.01.T01:CDS
TAATTAATTACCATCCAAAT+TGG 0.248365 4:+54135851 None:intergenic
TGTATTAGGCTGCTTCAATT+TGG 0.252322 4:-54134973 MsG0480021133.01.T01:intron
CCCCATAGAAGAAGCTCTTT+TGG 0.257188 4:-54134697 MsG0480021133.01.T01:CDS
TACCATTGAGCAGAAAGTTT+TGG 0.259846 4:+54134341 None:intergenic
TTTCCACACGACTTCATCTT+TGG 0.266191 4:-54140593 MsG0480021133.01.T01:CDS
ACAATTGCAGTTGAACAAAA+TGG 0.282995 4:-54135177 MsG0480021133.01.T01:intron
ATCCAAAAGAGCTTCTTCTA+TGG 0.310470 4:+54134695 None:intergenic
GACTGTAATGAATGGTTTGC+AGG 0.311829 4:-54134422 MsG0480021133.01.T01:CDS
ACAAGCATATGGATCGTAAT+AGG 0.315574 4:-54140820 None:intergenic
GCAGGCTTTACTGTTCGTTT+TGG 0.320577 4:-54134404 MsG0480021133.01.T01:CDS
CAAGCAGAACAAACCAAATA+TGG 0.329685 4:-54140741 MsG0480021133.01.T01:CDS
ATGTTCTAGCCCAACATGTT+TGG 0.329686 4:-54136217 MsG0480021133.01.T01:CDS
GGTTGCACCATATGATAGTT+AGG 0.331280 4:+54133871 None:intergenic
CAAGCATATGGATCGTAATA+GGG 0.335114 4:-54140819 None:intergenic
GATTGTGAAGGATCAGAATA+TGG 0.343226 4:-54136894 MsG0480021133.01.T01:CDS
GTGGTCTACATTACTGAAAA+TGG 0.345716 4:-54134884 MsG0480021133.01.T01:intron
TTCCACACGACTTCATCTTT+GGG 0.357460 4:-54140592 MsG0480021133.01.T01:CDS
CTATGCTGATCTTTGCTTCA+AGG 0.368377 4:-54136334 MsG0480021133.01.T01:CDS
TGTTCTAGCCCAACATGTTT+GGG 0.369906 4:-54136216 MsG0480021133.01.T01:CDS
GACTTACTTGGGAGTACTCT+TGG 0.375736 4:+54136845 None:intergenic
GTTTCAACTCCTCTTGATAT+CGG 0.378772 4:-54140635 MsG0480021133.01.T01:CDS
GCATATCAAAAGGGCAAGAT+AGG 0.386935 4:-54135958 MsG0480021133.01.T01:CDS
TTGGAGATAGAGTGAAGTAC+TGG 0.402108 4:-54136308 MsG0480021133.01.T01:CDS
AAAAGATCTCGAAGTCCTCT+TGG 0.415218 4:+54134938 None:intergenic
ATACTCGTCTTCTAAGACTT+GGG 0.426002 4:+54136477 None:intergenic
AGGATTGTTGTATTTCTCCT+TGG 0.434466 4:+54134907 None:intergenic
CAACCTCATCAACGAATTGT+TGG 0.435996 4:-54136657 MsG0480021133.01.T01:CDS
GTTACACTTACTTTCGCAAA+TGG 0.436382 4:-54140665 MsG0480021133.01.T01:CDS
AAACCAAATATGGTATTCAT+TGG 0.445254 4:-54140731 MsG0480021133.01.T01:CDS
GGATAATCTCCGGTTGTTAG+TGG 0.445923 4:+54135412 None:intergenic
ATTTAGTAAACTTAGGCAAT+CGG 0.451162 4:+54135362 None:intergenic
ATCAACGAATTGTTGGCTAA+TGG 0.451216 4:-54136650 MsG0480021133.01.T01:intron
GCATAACATTGGTAACAAAC+TGG 0.451582 4:-54135936 MsG0480021133.01.T01:CDS
CAATAGCATACCCGATCAAA+AGG 0.455559 4:-54135896 MsG0480021133.01.T01:CDS
TGTGTATAAGACCAAATATC+AGG 0.464035 4:-54136124 MsG0480021133.01.T01:intron
TATTACTACAGGAAGATGTT+GGG 0.470013 4:-54136916 MsG0480021133.01.T01:intron
TTATTACTACAGGAAGATGT+TGG 0.473846 4:-54136917 MsG0480021133.01.T01:intron
ATATGTGCAGGCATATCAAA+AGG 0.475467 4:-54135968 MsG0480021133.01.T01:intron
CCTATAGATTCTCAATCGCT+TGG 0.475831 4:-54136868 MsG0480021133.01.T01:CDS
CAAGTCTTAGAAGACGAGTA+TGG 0.476058 4:-54136475 MsG0480021133.01.T01:CDS
CACGACTTCATCTTTGGGGC+AGG 0.476592 4:-54140587 MsG0480021133.01.T01:CDS
TCCAAAAGAGCTTCTTCTAT+GGG 0.481438 4:+54134696 None:intergenic
ACCCAAAACTTTCTGCTCAA+TGG 0.483923 4:-54134343 MsG0480021133.01.T01:CDS
AACTTTGTTGATTACAATGG+TGG 0.488979 4:-54134377 MsG0480021133.01.T01:CDS
CCAAGCGATTGAGAATCTAT+AGG 0.495495 4:+54136868 None:intergenic
GATTGCAATTTAGTAAACTT+AGG 0.496766 4:+54135355 None:intergenic
CAGGGCCGGCTCGAATGTAA+AGG 0.500785 4:-54134468 MsG0480021133.01.T01:CDS
TATGGTGGTTTCTTAAGCTC+TGG 0.501539 4:-54136457 MsG0480021133.01.T01:CDS
CACTTGATTTCCAATTTGGA+TGG 0.501943 4:-54135861 MsG0480021133.01.T01:intron
CATACTCGTCTTCTAAGACT+TGG 0.503889 4:+54136476 None:intergenic
AGTAATGGTGGATATGCAAT+GGG 0.504655 4:-54136258 MsG0480021133.01.T01:CDS
AATTACCACCCAAACATGTT+GGG 0.506442 4:+54136208 None:intergenic
TGCACAGCTTCAAACAATAT+AGG 0.506641 4:+54134292 None:intergenic
ATGGAAGACCTCTAGGACCA+AGG 0.514084 4:-54135158 MsG0480021133.01.T01:CDS
GTGGAAAACTACTCCGACTC+AGG 0.514523 4:+54140609 None:intergenic
AGGGCCGGCTCGAATGTAAA+GGG 0.522499 4:-54134467 MsG0480021133.01.T01:CDS
TTGCAATCAAAGCTAGTGAA+TGG 0.522902 4:-54135340 MsG0480021133.01.T01:intron
GAATTACCACCCAAACATGT+TGG 0.526460 4:+54136207 None:intergenic
TTTATGGAACCACTAACAAC+CGG 0.531294 4:-54135421 MsG0480021133.01.T01:CDS
TGATCATAGCTGCTGGTACA+AGG 0.532753 4:+54134196 None:intergenic
GAACAAAATGGAAGACCTCT+AGG 0.533154 4:-54135165 MsG0480021133.01.T01:CDS
GAGCCATGGTTGTTTAGTAA+TGG 0.533702 4:-54136273 MsG0480021133.01.T01:CDS
GTCTGCCTCTTTATACATGA+AGG 0.537626 4:+54140788 None:intergenic
CCATGGTTGTTTAGTAATGG+TGG 0.540507 4:-54136270 MsG0480021133.01.T01:CDS
ATATATATGATCATAGCTGC+TGG 0.541858 4:+54134189 None:intergenic
TTGATATCGGTAACCTGAGT+CGG 0.546550 4:-54140622 MsG0480021133.01.T01:CDS
ACAAACTGGTTCATACCACT+TGG 0.548348 4:-54135922 MsG0480021133.01.T01:CDS
AACAACAAAGAGAGCAAGCA+TGG 0.551044 4:+54140694 None:intergenic
AAAATAGAGGGGAAGTTGAG+TGG 0.552316 4:-54136713 MsG0480021133.01.T01:intron
GAAACTCAAAGATTGAATCT+CGG 0.553131 4:-54134009 MsG0480021133.01.T01:three_prime_UTR
GGGTTACATTTAACGAGCCA+TGG 0.553181 4:-54136287 MsG0480021133.01.T01:CDS
GAAAGATTATTACTTGATTG+CGG 0.555386 4:+54134626 None:intergenic
TAGCCAACAATTCGTTGATG+AGG 0.556574 4:+54136654 None:intergenic
TCCACACGACTTCATCTTTG+GGG 0.557232 4:-54140591 MsG0480021133.01.T01:CDS
GTCCTCCTTCATGTATAAAG+AGG 0.565539 4:-54140793 MsG0480021133.01.T01:CDS
AAGCATATGGATCGTAATAG+GGG 0.574021 4:-54140818 None:intergenic
TGGAAGACCTCTAGGACCAA+GGG 0.580566 4:-54135157 MsG0480021133.01.T01:intron
AAATCCCTTTACATTCGAGC+CGG 0.581654 4:+54134463 None:intergenic
ATTACAATGGTGGATTGAAG+AGG 0.599231 4:-54134367 MsG0480021133.01.T01:CDS
AACGAATATAGAAGAAATGA+CGG 0.610437 4:+54134649 None:intergenic
TATGTGCAGGCATATCAAAA+GGG 0.610603 4:-54135967 MsG0480021133.01.T01:intron
GCAATGGGAACAACAGCACC+AGG 0.613253 4:-54136243 MsG0480021133.01.T01:CDS
TGGATATACGTTTATCCAAG+AGG 0.618701 4:-54134953 MsG0480021133.01.T01:CDS
AGTGGAGGCATAAATCATGA+AGG 0.618703 4:-54136695 MsG0480021133.01.T01:CDS
AGACTTACCCTTGGTCCTAG+AGG 0.620924 4:+54135150 None:intergenic
GGGCAAGATAGGCATAACAT+TGG 0.623136 4:-54135947 MsG0480021133.01.T01:CDS
GCCCCAAAGATGAAGTCGTG+TGG 0.624770 4:+54140590 None:intergenic
TACTCGTCTTCTAAGACTTG+GGG 0.626972 4:+54136478 None:intergenic
TGGAGATAGAGTGAAGTACT+GGG 0.629100 4:-54136307 MsG0480021133.01.T01:CDS
TTAAACTTTGTTGATTACAA+TGG 0.630472 4:-54134380 MsG0480021133.01.T01:CDS
TAGTAATGGTGGATATGCAA+TGG 0.631646 4:-54136259 MsG0480021133.01.T01:CDS
GTCTTAGAAGACGAGTATGG+TGG 0.639976 4:-54136472 MsG0480021133.01.T01:CDS
ATAGAGGGGAAGTTGAGTGG+AGG 0.640276 4:-54136710 MsG0480021133.01.T01:intron
CTCAGGTTACCGATATCAAG+AGG 0.646869 4:+54140626 None:intergenic
GGAAGATGTTGGGATTGTGA+AGG 0.647647 4:-54136906 MsG0480021133.01.T01:CDS
ATTCATTGGCTATTTCAATG+TGG 0.649386 4:-54140717 MsG0480021133.01.T01:CDS
TCTAGCCCAACATGTTTGGG+TGG 0.652575 4:-54136213 MsG0480021133.01.T01:CDS
CCAAAAGAGCTTCTTCTATG+GGG 0.661413 4:+54134697 None:intergenic
TGCCTCTTTATACATGAAGG+AGG 0.679710 4:+54140791 None:intergenic
CCACCATTACTAAACAACCA+TGG 0.686919 4:+54136270 None:intergenic
GGTATGCTATTGTTTCCAAG+TGG 0.687798 4:+54135907 None:intergenic
GGAGAAATACAACAATCCTG+TGG 0.722467 4:-54134903 MsG0480021133.01.T01:CDS
GTTGGGCTAGAACATCGACC+TGG 0.733866 4:+54136225 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAATT+GGG + Chr4:54138533-54138552 None:intergenic 0.0%
!! TAAAAAAAAAAAAAAAAAAT+TGG + Chr4:54138534-54138553 None:intergenic 0.0%
!! ACTTTATAATATATATTAGA+TGG + Chr4:54140055-54140074 None:intergenic 10.0%
!! TATATTAAATTTATTACTAC+AGG - Chr4:54137683-54137702 MsG0480021133.01.T01:intron 10.0%
!! TTATATTATATATAATTTGG+AGG + Chr4:54137179-54137198 None:intergenic 10.0%
!! TTTAAATGTAGAAAAAATAA+GGG - Chr4:54136555-54136574 MsG0480021133.01.T01:intron 10.0%
!!! AATCAATTTTACTTAAAAAA+AGG + Chr4:54140681-54140700 None:intergenic 10.0%
!!! ATCATATTAATTTTCTTAAA+TGG - Chr4:54139764-54139783 MsG0480021133.01.T01:intron 10.0%
!!! GTAATTCTTTTTTTTTTTTT+TGG + Chr4:54135388-54135407 None:intergenic 10.0%
!!! TGTTTTAAAAAAATAAAAGA+GGG + Chr4:54136861-54136880 None:intergenic 10.0%
!!! TTGTTTTAAAAAAATAAAAG+AGG + Chr4:54136862-54136881 None:intergenic 10.0%
!!! TTTTAAATGTAGAAAAAATA+AGG - Chr4:54136554-54136573 MsG0480021133.01.T01:intron 10.0%
!!! TTTTTATTAGTAAATAACAA+TGG - Chr4:54137065-54137084 MsG0480021133.01.T01:intron 10.0%
!!! TTTTTTTTAATTTGTTTGAT+TGG - Chr4:54139155-54139174 MsG0480021133.01.T01:intron 10.0%
!! AAATGCTATTAAAATTAAGT+AGG - Chr4:54134973-54134992 MsG0480021133.01.T01:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + Chr4:54134992-54134973 None:intergenic 15.0%
!! AATAAAAAGAGAAAAATTGA+AGG + Chr4:54137053-54137072 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - Chr4:54134974-54134993 MsG0480021133.01.T01:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + Chr4:54134993-54134974 None:intergenic 15.0%
!! ACAAAATTTAACAAATAGTT+TGG + Chr4:54138006-54138025 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - Chr4:54134782-54134801 MsG0480021133.01.T01:intron 15.0%
!! ATACAAAACCTTTATAATAT+AGG - Chr4:54134484-54134503 MsG0480021133.01.T01:intron 15.0%
!! ATAGTTTCTCATATATTATA+GGG + Chr4:54135048-54135067 None:intergenic 15.0%
!! ATTTGTCATCATAATATTAA+AGG + Chr4:54139374-54139393 None:intergenic 15.0%
!! CAAAAGATAATCTATTTAAA+TGG + Chr4:54136340-54136359 None:intergenic 15.0%
!! CAAATATTCATAATATATGT+CGG - Chr4:54138060-54138079 MsG0480021133.01.T01:intron 15.0%
!! CAATAATTCCTATTTAATAT+AGG + Chr4:54136641-54136660 None:intergenic 15.0%
!! TAATTAACCCTATATTATAA+AGG + Chr4:54134495-54134514 None:intergenic 15.0%
!! TACAAAACCTTTATAATATA+GGG - Chr4:54134485-54134504 MsG0480021133.01.T01:intron 15.0%
!! TATAGTTTCTCATATATTAT+AGG + Chr4:54135049-54135068 None:intergenic 15.0%
!! TTATATCTTAAAGTGATAAA+AGG + Chr4:54136789-54136808 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + Chr4:54134901-54134882 None:intergenic 15.0%
!!! AAAATATATTTTATTGCAAG+TGG + Chr4:54135479-54135498 None:intergenic 15.0%
!!! AAATATATTTTATTGCAAGT+GGG + Chr4:54135478-54135497 None:intergenic 15.0%
!!! AAGATTAACAACTTTTATTT+AGG + Chr4:54140363-54140382 None:intergenic 15.0%
!!! AATCAAAAATTTGTTGTTTT+CGG + Chr4:54136745-54136764 None:intergenic 15.0%
!!! AATTACTTATTGATTTGTTT+TGG - Chr4:54137575-54137594 MsG0480021133.01.T01:intron 15.0%
!!! AATTTAAAATCAAACAATGA+AGG + Chr4:54136490-54136509 None:intergenic 15.0%
!!! ACTTTTTTAATAAAGACAAA+AGG - Chr4:54136053-54136072 MsG0480021133.01.T01:intron 15.0%
!!! ATTTAAAACTTGTTAATCAT+GGG - Chr4:54135437-54135456 MsG0480021133.01.T01:intron 15.0%
!!! GATATCATTTTTTTTTTTGA+GGG + Chr4:54135976-54135995 None:intergenic 15.0%
!!! GTTTTTAACATAATATTTTC+TGG - Chr4:54137806-54137825 MsG0480021133.01.T01:intron 15.0%
!!! TAAATGTTTACATTCAATTT+TGG + Chr4:54135422-54135441 None:intergenic 15.0%
!!! TATTAATTTTCTTAAATGGA+TGG - Chr4:54139768-54139787 MsG0480021133.01.T01:intron 15.0%
!!! TGATATCATTTTTTTTTTTG+AGG + Chr4:54135977-54135996 None:intergenic 15.0%
!!! TTGATTTAAAAAAGCTTTTT+TGG - Chr4:54134371-54134390 MsG0480021133.01.T01:CDS 15.0%
!!! TTTTACTTCATAAAAATAGA+GGG - Chr4:54137885-54137904 MsG0480021133.01.T01:intron 15.0%
!!! TTTTTACTTCATAAAAATAG+AGG - Chr4:54137884-54137903 MsG0480021133.01.T01:intron 15.0%
!! AAAAGTGATGATAAAATTGT+TGG + Chr4:54137855-54137874 None:intergenic 20.0%
!! AAAATCGTACAATTTATGTT+AGG + Chr4:54137256-54137275 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - Chr4:54134912-54134931 MsG0480021133.01.T01:CDS 20.0%
!! AAAGAAATTTACCTGATATT+TGG + Chr4:54138500-54138519 None:intergenic 20.0%
!! AACAAATGACTAAACAAATT+TGG + Chr4:54137211-54137230 None:intergenic 20.0%
!! AAGATAATCTATTTAAATGG+AGG + Chr4:54136337-54136356 None:intergenic 20.0%
!! AAGTCTATTTAATGACTTAA+AGG - Chr4:54136683-54136702 MsG0480021133.01.T01:CDS 20.0%
!! AATATGTGCAAATTTATACA+TGG + Chr4:54137441-54137460 None:intergenic 20.0%
!! AATTCCTATTTAATATAGGA+CGG + Chr4:54136637-54136656 None:intergenic 20.0%
!! ACTAACACAAAAAAGTAAAT+TGG - Chr4:54133845-54133864 MsG0480021133.01.T01:three_prime_UTR 20.0%
!! AGATAATCTATTTAAATGGA+GGG + Chr4:54136336-54136355 None:intergenic 20.0%
!! ATATCTTAATCTTAAAAGAG+AGG + Chr4:54135554-54135573 None:intergenic 20.0%
!! ATGTGTAGATAACTATAATT+TGG - Chr4:54138226-54138245 MsG0480021133.01.T01:intron 20.0%
!! ATTATGTTAAAAACTGTCTA+TGG + Chr4:54137800-54137819 None:intergenic 20.0%
!! TAAAAAACCTAACTATCATA+TGG - Chr4:54140732-54140751 MsG0480021133.01.T01:CDS 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - Chr4:54134911-54134930 MsG0480021133.01.T01:CDS 20.0%
!! TAATTAATTACCATCCAAAT+TGG + Chr4:54138762-54138781 None:intergenic 20.0%
!! TACATTTAAACAGTTCATAT+AGG - Chr4:54139070-54139089 MsG0480021133.01.T01:intron 20.0%
!! TCAAAATAATAAGATTGTAC+TGG - Chr4:54137468-54137487 MsG0480021133.01.T01:intron 20.0%
!! TCTAAAAAATTGTCACAAAA+TGG + Chr4:54137027-54137046 None:intergenic 20.0%
!! TGATTATGTGTAACTATATA+AGG + Chr4:54138439-54138458 None:intergenic 20.0%
!! TGATTTATGTATATCAAACT+TGG + Chr4:54136118-54136137 None:intergenic 20.0%
!! TGGTGTCTATAATAAAAAAT+AGG - Chr4:54136710-54136729 MsG0480021133.01.T01:intron 20.0%
!! TGTATTCATTAAACTAGAAA+TGG + Chr4:54135321-54135340 None:intergenic 20.0%
!! TTATGTTAAAAACTGTCTAT+GGG + Chr4:54137799-54137818 None:intergenic 20.0%
!! TTTACTTCATAAAAATAGAG+GGG - Chr4:54137886-54137905 MsG0480021133.01.T01:intron 20.0%
!!! AATTCACTAGTTTAATTACA+AGG + Chr4:54134436-54134455 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - Chr4:54134817-54134836 MsG0480021133.01.T01:intron 20.0%
!!! CATTTAAAACTTGTTAATCA+TGG - Chr4:54135436-54135455 MsG0480021133.01.T01:intron 20.0%
!!! GTATGCTTACATTTTTTTTA+AGG + Chr4:54137305-54137324 None:intergenic 20.0%
!!! TCTTTTTTTTTTTTTTGGTC+AGG + Chr4:54135383-54135402 None:intergenic 20.0%
!!! TGTTTGTTTGTTTTTTTTAC+CGG - Chr4:54135712-54135731 MsG0480021133.01.T01:intron 20.0%
!!! TTAAACTTTGTTGATTACAA+TGG - Chr4:54140230-54140249 MsG0480021133.01.T01:intron 20.0%
!!! TTAACATAATATTTTCTGGT+TGG - Chr4:54137810-54137829 MsG0480021133.01.T01:intron 20.0%
!!! TTCATTCCATTTTTTTTTGA+GGG - Chr4:54137604-54137623 MsG0480021133.01.T01:intron 20.0%
!!! TTTAAAAAAGCTTTTTTGGT+TGG - Chr4:54134375-54134394 MsG0480021133.01.T01:CDS 20.0%
!!! TTTCATTCCATTTTTTTTTG+AGG - Chr4:54137603-54137622 MsG0480021133.01.T01:intron 20.0%
!!! TTTGTTTAGTCATTTGTTAT+CGG - Chr4:54137213-54137232 MsG0480021133.01.T01:intron 20.0%
!!! TTTTTTTTTGTTGAAGAATC+CGG - Chr4:54135759-54135778 MsG0480021133.01.T01:intron 20.0%
! AAACCAAATATGGTATTCAT+TGG - Chr4:54133879-54133898 MsG0480021133.01.T01:three_prime_UTR 25.0%
! AACGAATATAGAAGAAATGA+CGG + Chr4:54139964-54139983 None:intergenic 25.0%
! AACTAGAAATGGAAATTAAC+TGG + Chr4:54135310-54135329 None:intergenic 25.0%
! AACTGTTTAAATGTAGTGTA+TGG + Chr4:54139065-54139084 None:intergenic 25.0%
! AATAAAATATGCTAAGTGTG+AGG - Chr4:54136207-54136226 MsG0480021133.01.T01:CDS 25.0%
! AATGTAGAAAAAATAAGGGA+TGG - Chr4:54136559-54136578 MsG0480021133.01.T01:intron 25.0%
! ACATACAAAAAGTTAATGAG+AGG - Chr4:54134456-54134475 MsG0480021133.01.T01:CDS 25.0%
! ACATGTTTAATCAAAACATC+TGG + Chr4:54136410-54136429 None:intergenic 25.0%
! AGAATATGTATGATATGTAC+AGG - Chr4:54139863-54139882 MsG0480021133.01.T01:intron 25.0%
! AGATAGAAAGAAAAAAAACC+TGG + Chr4:54135234-54135253 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - Chr4:54134945-54134964 MsG0480021133.01.T01:CDS 25.0%
! ATGTAAGCATACACTATTAA+TGG - Chr4:54137313-54137332 MsG0480021133.01.T01:intron 25.0%
! ATTTAGTAAACTTAGGCAAT+CGG + Chr4:54139251-54139270 None:intergenic 25.0%
! CAAAATTGGTTAACATTATG+TGG + Chr4:54134334-54134353 None:intergenic 25.0%
! CAAACATGTATATAGTTTGA+AGG - Chr4:54135150-54135169 MsG0480021133.01.T01:intron 25.0%
! CAAGAAAATATGTACATACT+TGG + Chr4:54134061-54134080 None:intergenic 25.0%
! CATATTCTTTCAAATTAGTC+AGG + Chr4:54139851-54139870 None:intergenic 25.0%
! GAAAGATTATTACTTGATTG+CGG + Chr4:54139987-54140006 None:intergenic 25.0%
! GAAATTCCCTCAAAAAAAAA+TGG + Chr4:54137613-54137632 None:intergenic 25.0%
! GATTGCAATTTAGTAAACTT+AGG + Chr4:54139258-54139277 None:intergenic 25.0%
! TAAACAGTTCATATAGGTTA+AGG - Chr4:54139076-54139095 MsG0480021133.01.T01:intron 25.0%
! TAGGCAAATGATATTTGAAA+TGG + Chr4:54138193-54138212 None:intergenic 25.0%
! TATATCAAACTTGTATAGCA+TGG + Chr4:54136020-54136039 None:intergenic 25.0%
! TATCATTACTCAATTTGAAG+TGG + Chr4:54137003-54137022 None:intergenic 25.0%
! TATCTTAAAGTGATAAAAGG+TGG + Chr4:54136786-54136805 None:intergenic 25.0%
! TCTATTTAATGACTTAAAGG+AGG - Chr4:54136686-54136705 MsG0480021133.01.T01:CDS 25.0%
! TTAACACGTGTAATATGAAT+TGG - Chr4:54137552-54137571 MsG0480021133.01.T01:intron 25.0%
! TTTGAATGGACAAAAAAACA+TGG + Chr4:54138950-54138969 None:intergenic 25.0%
!! ACTTAGCATATTTTATTCCA+TGG + Chr4:54136204-54136223 None:intergenic 25.0%
!! AGTTATGAATTTTCATTTCG+TGG - Chr4:54140109-54140128 MsG0480021133.01.T01:intron 25.0%
!! ATCATTACTCAATTTGAAGT+GGG + Chr4:54137002-54137021 None:intergenic 25.0%
!! ATTGAGATTTCTTTTGATCA+AGG + Chr4:54140763-54140782 None:intergenic 25.0%
!! CATAATGTTAACCAATTTTG+AGG - Chr4:54134334-54134353 MsG0480021133.01.T01:CDS 25.0%
!! TAAATGTAGTGTATGGATTA+TGG + Chr4:54139058-54139077 None:intergenic 25.0%
!! TATTATACCTTTTGTCATTG+AGG + Chr4:54136158-54136177 None:intergenic 25.0%
!! TTTAAAGAATTTTGCTCTAC+CGG + Chr4:54135921-54135940 None:intergenic 25.0%
!! TTTTAATAGCCATAGTATGT+AGG - Chr4:54135683-54135702 MsG0480021133.01.T01:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + Chr4:54134622-54134641 None:intergenic 25.0%
!!! ATTCGTAACTCTTTTTCATT+GGG - Chr4:54138104-54138123 MsG0480021133.01.T01:intron 25.0%
!!! ATTGGTTTATTTCAGGTTTA+TGG - Chr4:54139173-54139192 MsG0480021133.01.T01:intron 25.0%
!!! ATTTCGTGGTTTTTTTTTAC+AGG - Chr4:54140123-54140142 MsG0480021133.01.T01:intron 25.0%
!!! GTTTTTTTGTCCATTCAAAA+TGG - Chr4:54138951-54138970 MsG0480021133.01.T01:intron 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + Chr4:54134623-54134642 None:intergenic 25.0%
!!! TCGTCTTTTAAGAAAATATC+CGG - Chr4:54135899-54135918 MsG0480021133.01.T01:CDS 25.0%
!!! TTGTTTGATTGGTTTATTTC+AGG - Chr4:54139166-54139185 MsG0480021133.01.T01:intron 25.0%
!!! TTTCGTGGTTTTTTTTTACA+GGG - Chr4:54140124-54140143 MsG0480021133.01.T01:intron 25.0%
!!! TTTTTTTCCTCAATGACAAA+AGG - Chr4:54136148-54136167 MsG0480021133.01.T01:CDS 25.0%
AAAAAAAACCTACCTACTAC+CGG + Chr4:54135734-54135753 None:intergenic 30.0%
AAAAAAAACCTGGATGTTGA+TGG + Chr4:54135224-54135243 None:intergenic 30.0%
AAAAAAACCTGGATGTTGAT+GGG + Chr4:54135223-54135242 None:intergenic 30.0%
AAAATTAATAAGCACCACCA+TGG - Chr4:54136184-54136203 MsG0480021133.01.T01:CDS 30.0%
AAAGTTACATGTATATGTGC+AGG - Chr4:54138630-54138649 MsG0480021133.01.T01:intron 30.0%
AATCTTAAAAGAGAGGAGTT+AGG + Chr4:54135547-54135566 None:intergenic 30.0%
ACAAACAAACCTACATACTA+TGG + Chr4:54135695-54135714 None:intergenic 30.0%
ACAACAACGATATTTGTCTA+AGG + Chr4:54137361-54137380 None:intergenic 30.0%
ACAATTGCAGTTGAACAAAA+TGG - Chr4:54139433-54139452 MsG0480021133.01.T01:intron 30.0%
AGATCACTTGATTTCCAATT+TGG - Chr4:54138745-54138764 MsG0480021133.01.T01:intron 30.0%
ATACAGAGAAAACAAAGGAA+AGG - Chr4:54135271-54135290 MsG0480021133.01.T01:intron 30.0%
ATAGGATCTGTTAAGTAACT+TGG + Chr4:54139316-54139335 None:intergenic 30.0%
ATATATATGATCATAGCTGC+TGG + Chr4:54140424-54140443 None:intergenic 30.0%
ATTGTCCTTAGTCGTAAAAT+AGG - Chr4:54136657-54136676 MsG0480021133.01.T01:CDS 30.0%
CAAGATTAGAACACTATGAA+AGG - Chr4:54134685-54134704 MsG0480021133.01.T01:CDS 30.0%
CAATGAAAAAGAGTTACGAA+TGG + Chr4:54138105-54138124 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG - Chr4:54134944-54134963 MsG0480021133.01.T01:CDS 30.0%
CTAACATACAGAGAAAACAA+AGG - Chr4:54135266-54135285 MsG0480021133.01.T01:intron 30.0%
CTTTCAAATTAGTCAGGATA+AGG + Chr4:54139845-54139864 None:intergenic 30.0%
GAAACTCAAAGATTGAATCT+CGG - Chr4:54140601-54140620 MsG0480021133.01.T01:CDS 30.0%
GAGTAAGAAAAAAGAAGAGA+TGG - Chr4:54137087-54137106 MsG0480021133.01.T01:intron 30.0%
TAGCCAATGAATACCATATT+TGG + Chr4:54133885-54133904 None:intergenic 30.0%
TATGACTAATACCTCATGTA+AGG - Chr4:54139333-54139352 MsG0480021133.01.T01:intron 30.0%
TATTAAAGTTAAGCACTCCA+CGG - Chr4:54136081-54136100 MsG0480021133.01.T01:intron 30.0%
TATTACTACAGGAAGATGTT+GGG - Chr4:54137694-54137713 MsG0480021133.01.T01:intron 30.0%
TCCATTCAAAATGGTGTATT+TGG - Chr4:54138960-54138979 MsG0480021133.01.T01:intron 30.0%
TGAACTACTGGAAGAAAAAA+CGG + Chr4:54134255-54134274 None:intergenic 30.0%
TGTGTATAAGACCAAATATC+AGG - Chr4:54138486-54138505 MsG0480021133.01.T01:intron 30.0%
TTAATCAAAACATCTGGCAT+AGG + Chr4:54136404-54136423 None:intergenic 30.0%
TTATTACTACAGGAAGATGT+TGG - Chr4:54137693-54137712 MsG0480021133.01.T01:intron 30.0%
TTTAATGACTTAAAGGAGGT+TGG - Chr4:54136690-54136709 MsG0480021133.01.T01:CDS 30.0%
! AACTTTGTTGATTACAATGG+TGG - Chr4:54140233-54140252 MsG0480021133.01.T01:intron 30.0%
! ATTCATTGGCTATTTCAATG+TGG - Chr4:54133893-54133912 MsG0480021133.01.T01:three_prime_UTR 30.0%
! CAAAAAAACATGGTTTTCTC+TGG + Chr4:54138940-54138959 None:intergenic 30.0%
! TAGCATATTTTATTCCATGG+TGG + Chr4:54136201-54136220 None:intergenic 30.0%
! TCCAAATACACCATTTTGAA+TGG + Chr4:54138964-54138983 None:intergenic 30.0%
! TTACATGAGGTATTAGTCAT+AGG + Chr4:54139334-54139353 None:intergenic 30.0%
! TTTCTCCTATTTTACGACTA+AGG + Chr4:54136665-54136684 None:intergenic 30.0%
!! AACAACTTTTATTTAGGTGC+TGG + Chr4:54140357-54140376 None:intergenic 30.0%
!! AGATCTTTTGTTATACACCA+AGG - Chr4:54139686-54139705 MsG0480021133.01.T01:intron 30.0%
!! ATTTTTCGCATGGTCATTTT+TGG - Chr4:54140166-54140185 MsG0480021133.01.T01:intron 30.0%
!! CATTCGTAACTCTTTTTCAT+TGG - Chr4:54138103-54138122 MsG0480021133.01.T01:intron 30.0%
!! CATTTTTGGACTGTAATGAA+TGG - Chr4:54140180-54140199 MsG0480021133.01.T01:intron 30.0%
!! GTCATTCAACTCTTTAAAGT+CGG + Chr4:54136978-54136997 None:intergenic 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr4:54135005-54135024 MsG0480021133.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + Chr4:54135024-54135005 None:intergenic 30.0%
!! TATTTTATTGCAAGTGGGTT+AGG + Chr4:54135473-54135492 None:intergenic 30.0%
!! TCCAACAATTTCTAAAACTC+CGG + Chr4:54138992-54139011 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr4:54135004-54135023 MsG0480021133.01.T01:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + Chr4:54135023-54135004 None:intergenic 30.0%
!! TTGTTGATTTGCCTCAAAAT+TGG + Chr4:54134348-54134367 None:intergenic 30.0%
!!! CATTTACGAACTTTTCAAGT+AGG + Chr4:54135605-54135624 None:intergenic 30.0%
!!! TTGTTTTTTTTACCGGTAGT+AGG - Chr4:54135719-54135738 MsG0480021133.01.T01:intron 30.0%
!!! TTTTATTTAGGTGCTGGATT+TGG + Chr4:54140351-54140370 None:intergenic 30.0%
AAAAAACGGTGACACGATTT+GGG + Chr4:54134241-54134260 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - Chr4:54134989-54135008 MsG0480021133.01.T01:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG + Chr4:54135008-54134989 None:intergenic 35.0%
AATTACCACCCAAACATGTT+GGG + Chr4:54138405-54138424 None:intergenic 35.0%
AGCTCCGTCCTATATTAAAT+AGG - Chr4:54136630-54136649 MsG0480021133.01.T01:intron 35.0%
AGGATTGTTGTATTTCTCCT+TGG + Chr4:54139706-54139725 None:intergenic 35.0%
ATATGTGCAGGCATATCAAA+AGG - Chr4:54138642-54138661 MsG0480021133.01.T01:intron 35.0%
ATCCAAAAGAGCTTCTTCTA+TGG + Chr4:54139918-54139937 None:intergenic 35.0%
ATCTATACAGTTGCGTGAAT+AGG + Chr4:54134100-54134119 None:intergenic 35.0%
ATCTGTTAAGTAACTTGGAG+GGG + Chr4:54139311-54139330 None:intergenic 35.0%
ATGGTGTATTTGGATGAAAC+CGG - Chr4:54138970-54138989 MsG0480021133.01.T01:intron 35.0%
CAAGCAGAACAAACCAAATA+TGG - Chr4:54133869-54133888 MsG0480021133.01.T01:three_prime_UTR 35.0%
CACTTGATTTCCAATTTGGA+TGG - Chr4:54138749-54138768 MsG0480021133.01.T01:intron 35.0%
CTATTTAAATGGAGGGTCTA+TGG + Chr4:54136329-54136348 None:intergenic 35.0%
GACTTTCTTGTACTAGATAC+TGG + Chr4:54138814-54138833 None:intergenic 35.0%
GATCTGTTAAGTAACTTGGA+GGG + Chr4:54139312-54139331 None:intergenic 35.0%
GATCTTTGCTTCAAGGAATT+TGG - Chr4:54138283-54138302 MsG0480021133.01.T01:intron 35.0%
GATTGTGAAGGATCAGAATA+TGG - Chr4:54137716-54137735 MsG0480021133.01.T01:intron 35.0%
GGTGTAGCTTTCAAATAAGA+TGG + Chr4:54138844-54138863 None:intergenic 35.0%
GTGGTCTACATTACTGAAAA+TGG - Chr4:54139726-54139745 MsG0480021133.01.T01:intron 35.0%
GTTACACTTACTTTCGCAAA+TGG - Chr4:54133945-54133964 MsG0480021133.01.T01:three_prime_UTR 35.0%
GTTGGAGGATAAAAACACTT+TGG - Chr4:54139006-54139025 MsG0480021133.01.T01:intron 35.0%
GTTTCAACTCCTCTTGATAT+CGG - Chr4:54133975-54133994 MsG0480021133.01.T01:three_prime_UTR 35.0%
TAGGTTGTTCGTATGGAAAT+TGG + Chr4:54136385-54136404 None:intergenic 35.0%
TATGTGCAGGCATATCAAAA+GGG - Chr4:54138643-54138662 MsG0480021133.01.T01:intron 35.0%
TCCAAAAGAGCTTCTTCTAT+GGG + Chr4:54139917-54139936 None:intergenic 35.0%
TGCACAGCTTCAAACAATAT+AGG + Chr4:54140321-54140340 None:intergenic 35.0%
TGGATATACGTTTATCCAAG+AGG - Chr4:54139657-54139676 MsG0480021133.01.T01:intron 35.0%
TGTATTAGGCTGCTTCAATT+TGG - Chr4:54139637-54139656 MsG0480021133.01.T01:intron 35.0%
TTGCAATCAAAGCTAGTGAA+TGG - Chr4:54139270-54139289 MsG0480021133.01.T01:intron 35.0%
TTTATGGAACCACTAACAAC+CGG - Chr4:54139189-54139208 MsG0480021133.01.T01:intron 35.0%
! ACCATTGAGCAGAAAGTTTT+GGG + Chr4:54140271-54140290 None:intergenic 35.0%
! ATCAACGAATTGTTGGCTAA+TGG - Chr4:54137960-54137979 MsG0480021133.01.T01:intron 35.0%
! ATGTAAAGGGATTTTTCGCA+TGG - Chr4:54140156-54140175 MsG0480021133.01.T01:intron 35.0%
! GCATAACATTGGTAACAAAC+TGG - Chr4:54138674-54138693 MsG0480021133.01.T01:intron 35.0%
! TACCATTGAGCAGAAAGTTT+TGG + Chr4:54140272-54140291 None:intergenic 35.0%
! TTTTCAGTAATGTAGACCAC+AGG + Chr4:54139726-54139745 None:intergenic 35.0%
!! AGTAATGGTGGATATGCAAT+GGG - Chr4:54138352-54138371 MsG0480021133.01.T01:intron 35.0%
!! ATACTCGTCTTCTAAGACTT+GGG + Chr4:54138136-54138155 None:intergenic 35.0%
!! ATTACAATGGTGGATTGAAG+AGG - Chr4:54140243-54140262 MsG0480021133.01.T01:intron 35.0%
!! TAGTAATGGTGGATATGCAA+TGG - Chr4:54138351-54138370 MsG0480021133.01.T01:intron 35.0%
!!! ACCGGAGTTTTAGAAATTGT+TGG - Chr4:54138988-54139007 MsG0480021133.01.T01:intron 35.0%
!!! CATGCTTTTAGGATAATCTC+CGG + Chr4:54139211-54139230 None:intergenic 35.0%
!!! CGATTTTTGAGATAGAACGT+CGG + Chr4:54134278-54134297 None:intergenic 35.0%
!!! GGAGTTTTAGAAATTGTTGG+AGG - Chr4:54138991-54139010 MsG0480021133.01.T01:intron 35.0%
!!! TTTTTTTACCGGTAGTAGGT+AGG - Chr4:54135723-54135742 MsG0480021133.01.T01:intron 35.0%
AAAAGATCTCGAAGTCCTCT+TGG + Chr4:54139675-54139694 None:intergenic 40.0%
AAAATAGAGGGGAAGTTGAG+TGG - Chr4:54137897-54137916 MsG0480021133.01.T01:intron 40.0%
AAATCCCTTTACATTCGAGC+CGG + Chr4:54140150-54140169 None:intergenic 40.0%
AACAACAAAGAGAGCAAGCA+TGG + Chr4:54133919-54133938 None:intergenic 40.0%
AACACAAGTGTCCTTACATG+AGG + Chr4:54139347-54139366 None:intergenic 40.0%
ACACATTGAATCGCTATGCT+AGG + Chr4:54138212-54138231 None:intergenic 40.0%
ACATGTTTGGGTGGTAATTC+TGG - Chr4:54138406-54138425 MsG0480021133.01.T01:intron 40.0%
ACCCAAAACTTTCTGCTCAA+TGG - Chr4:54140267-54140286 MsG0480021133.01.T01:intron 40.0%
AGTTACTAGAGACTTACCCT+TGG + Chr4:54139472-54139491 None:intergenic 40.0%
ATGTTCTAGCCCAACATGTT+TGG - Chr4:54138393-54138412 MsG0480021133.01.T01:intron 40.0%
CAACCTCATCAACGAATTGT+TGG - Chr4:54137953-54137972 MsG0480021133.01.T01:intron 40.0%
CAAGTCTTAGAAGACGAGTA+TGG - Chr4:54138135-54138154 MsG0480021133.01.T01:intron 40.0%
CAATAGCATACCCGATCAAA+AGG - Chr4:54138714-54138733 MsG0480021133.01.T01:intron 40.0%
CCAAAAGAGCTTCTTCTATG+GGG + Chr4:54139916-54139935 None:intergenic 40.0%
CCAAGCGATTGAGAATCTAT+AGG + Chr4:54137745-54137764 None:intergenic 40.0%
CCACCATTACTAAACAACCA+TGG + Chr4:54138343-54138362 None:intergenic 40.0%
CCATGGTTGTTTAGTAATGG+TGG - Chr4:54138340-54138359 MsG0480021133.01.T01:intron 40.0%
CCTATAGATTCTCAATCGCT+TGG - Chr4:54137742-54137761 MsG0480021133.01.T01:intron 40.0%
CTATGCTGATCTTTGCTTCA+AGG - Chr4:54138276-54138295 MsG0480021133.01.T01:intron 40.0%
GAAAAAACGGTGACACGATT+TGG + Chr4:54134242-54134261 None:intergenic 40.0%
GAACAAAATGGAAGACCTCT+AGG - Chr4:54139445-54139464 MsG0480021133.01.T01:intron 40.0%
GAATTACCACCCAAACATGT+TGG + Chr4:54138406-54138425 None:intergenic 40.0%
GAGCCATGGTTGTTTAGTAA+TGG - Chr4:54138337-54138356 MsG0480021133.01.T01:intron 40.0%
GCATATCAAAAGGGCAAGAT+AGG - Chr4:54138652-54138671 MsG0480021133.01.T01:intron 40.0%
GGAGAAATACAACAATCCTG+TGG - Chr4:54139707-54139726 MsG0480021133.01.T01:intron 40.0%
GGATCTGTTAAGTAACTTGG+AGG + Chr4:54139313-54139332 None:intergenic 40.0%
GGGTGCTAAATAGTGTCTTA+GGG + Chr4:54136841-54136860 None:intergenic 40.0%
GGTATGCTATTGTTTCCAAG+TGG + Chr4:54138706-54138725 None:intergenic 40.0%
GGTTGCACCATATGATAGTT+AGG + Chr4:54140742-54140761 None:intergenic 40.0%
GTACCTTATAGCGATGGTAT+TGG + Chr4:54136609-54136628 None:intergenic 40.0%
GTCCTCCTTCATGTATAAAG+AGG - Chr4:54133817-54133836 MsG0480021133.01.T01:three_prime_UTR 40.0%
GTCGGATGTGAAGAAAATGA+TGG + Chr4:54138908-54138927 None:intergenic 40.0%
GTCTGCCTCTTTATACATGA+AGG + Chr4:54133825-54133844 None:intergenic 40.0%
GTGTCTTAGGGATCTAGTTA+AGG + Chr4:54136829-54136848 None:intergenic 40.0%
TAGCCAACAATTCGTTGATG+AGG + Chr4:54137959-54137978 None:intergenic 40.0%
TATACCAACCTACCTACTAC+CGG + Chr4:54135781-54135800 None:intergenic 40.0%
TATGGTGGTTTCTTAAGCTC+TGG - Chr4:54138153-54138172 MsG0480021133.01.T01:intron 40.0%
TGACCAATACCATCGCTATA+AGG - Chr4:54136603-54136622 MsG0480021133.01.T01:intron 40.0%
TGCCTCTTTATACATGAAGG+AGG + Chr4:54133822-54133841 None:intergenic 40.0%
TGTATCCGAAATTGTTGTGG+CGG + Chr4:54138865-54138884 None:intergenic 40.0%
TGTTCTAGCCCAACATGTTT+GGG - Chr4:54138394-54138413 MsG0480021133.01.T01:intron 40.0%
TTCCACACGACTTCATCTTT+GGG - Chr4:54134018-54134037 MsG0480021133.01.T01:three_prime_UTR 40.0%
TTGATATCGGTAACCTGAGT+CGG - Chr4:54133988-54134007 MsG0480021133.01.T01:three_prime_UTR 40.0%
TTGGAGATAGAGTGAAGTAC+TGG - Chr4:54138302-54138321 MsG0480021133.01.T01:intron 40.0%
TTGTTATCGGATCACTCTCT+AGG - Chr4:54137226-54137245 MsG0480021133.01.T01:intron 40.0%
TTGTTGAAGAATCCGGTAGT+AGG - Chr4:54135766-54135785 MsG0480021133.01.T01:intron 40.0%
TTTCCACACGACTTCATCTT+TGG - Chr4:54134017-54134036 MsG0480021133.01.T01:three_prime_UTR 40.0%
TTTCTCTGGATCCTTTGTGT+CGG + Chr4:54138926-54138945 None:intergenic 40.0%
TTTCTTCACATCCGACACAA+AGG - Chr4:54138912-54138931 MsG0480021133.01.T01:intron 40.0%
! ACAAACTGGTTCATACCACT+TGG - Chr4:54138688-54138707 MsG0480021133.01.T01:intron 40.0%
! ACTATGGCTCTCATGCTTTT+AGG + Chr4:54139222-54139241 None:intergenic 40.0%
! ACTTGGCATATTTTATGCCG+TGG + Chr4:54136101-54136120 None:intergenic 40.0%
! AGGGTGCTAAATAGTGTCTT+AGG + Chr4:54136842-54136861 None:intergenic 40.0%
! AGTGGAGGCATAAATCATGA+AGG - Chr4:54137915-54137934 MsG0480021133.01.T01:intron 40.0%
! ATAGTTTGAAGGTGCAGTAC+AGG - Chr4:54135161-54135180 MsG0480021133.01.T01:CDS 40.0%
! CAATTTCGGATACACCGTTT+TGG - Chr4:54138871-54138890 MsG0480021133.01.T01:intron 40.0%
! GACTGTAATGAATGGTTTGC+AGG - Chr4:54140188-54140207 MsG0480021133.01.T01:intron 40.0%
! TCTCTTAGCAGCCTTTTGAT+CGG + Chr4:54138728-54138747 None:intergenic 40.0%
! TGGAGATAGAGTGAAGTACT+GGG - Chr4:54138303-54138322 MsG0480021133.01.T01:intron 40.0%
!! AGGCAATCGGTTTTTCACTA+TGG + Chr4:54139238-54139257 None:intergenic 40.0%
!! CATACTCGTCTTCTAAGACT+TGG + Chr4:54138137-54138156 None:intergenic 40.0%
!! TACTCGTCTTCTAAGACTTG+GGG + Chr4:54138135-54138154 None:intergenic 40.0%
!!! GTGACCTGATTTTAGAATCG+TGG + Chr4:54134303-54134322 None:intergenic 40.0%
!!! GTGGTTTTTTTTTACAGGGC+CGG - Chr4:54140128-54140147 MsG0480021133.01.T01:intron 40.0%
AAGCTAGTGAATGGTTCCTC+AGG - Chr4:54139279-54139298 MsG0480021133.01.T01:intron 45.0%
AGCTAGTGAATGGTTCCTCA+GGG - Chr4:54139280-54139299 MsG0480021133.01.T01:intron 45.0%
ATAGAACGTCGGTGAACTAC+TGG + Chr4:54134267-54134286 None:intergenic 45.0%
CGGTGTATCCGAAATTGTTG+TGG + Chr4:54138868-54138887 None:intergenic 45.0%
CTACACCGCCACAACAATTT+CGG - Chr4:54138857-54138876 MsG0480021133.01.T01:intron 45.0%
CTCAGGTTACCGATATCAAG+AGG + Chr4:54133987-54134006 None:intergenic 45.0%
GAGAGGAGTTAGGTCTCAAA+AGG + Chr4:54135537-54135556 None:intergenic 45.0%
GAGCTAGTACCTTATAGCGA+TGG + Chr4:54136615-54136634 None:intergenic 45.0%
GGAAGATGTTGGGATTGTGA+AGG - Chr4:54137704-54137723 MsG0480021133.01.T01:intron 45.0%
GGATAATCTCCGGTTGTTAG+TGG + Chr4:54139201-54139220 None:intergenic 45.0%
GGGCAAGATAGGCATAACAT+TGG - Chr4:54138663-54138682 MsG0480021133.01.T01:intron 45.0%
GGGTTACATTTAACGAGCCA+TGG - Chr4:54138323-54138342 MsG0480021133.01.T01:intron 45.0%
GTCTTAGAAGACGAGTATGG+TGG - Chr4:54138138-54138157 MsG0480021133.01.T01:intron 45.0%
TCCACACGACTTCATCTTTG+GGG - Chr4:54134019-54134038 MsG0480021133.01.T01:three_prime_UTR 45.0%
TCTGGCATAGGTTGTTCGTA+TGG + Chr4:54136392-54136411 None:intergenic 45.0%
TGAAGAATCCGGTAGTAGGT+AGG - Chr4:54135770-54135789 MsG0480021133.01.T01:intron 45.0%
TGATCATAGCTGCTGGTACA+AGG + Chr4:54140417-54140436 None:intergenic 45.0%
TGGTAGAGGACCAAGTATCT+GGG - Chr4:54135188-54135207 MsG0480021133.01.T01:intron 45.0%
! CCCCATAGAAGAAGCTCTTT+TGG - Chr4:54139913-54139932 MsG0480021133.01.T01:intron 45.0%
! CTCTTAGCAGCCTTTTGATC+GGG + Chr4:54138727-54138746 None:intergenic 45.0%
! GCAGGCTTTACTGTTCGTTT+TGG - Chr4:54140206-54140225 MsG0480021133.01.T01:intron 45.0%
! TTTGAAGGTGCAGTACAGGA+AGG - Chr4:54135165-54135184 MsG0480021133.01.T01:CDS 45.0%
!! CGTGCCACGATTCTAAAATC+AGG - Chr4:54134296-54134315 MsG0480021133.01.T01:three_prime_UTR 45.0%
!! GACTTACTTGGGAGTACTCT+TGG + Chr4:54137768-54137787 None:intergenic 45.0%
!! TTCGGATACACCGTTTTGGA+CGG - Chr4:54138875-54138894 MsG0480021133.01.T01:intron 45.0%
!!! TGGTTTTAGCCCGTCCAAAA+CGG + Chr4:54138888-54138907 None:intergenic 45.0%
!! AAAATAATAATAATTGTATT+AGG - Chr4:54139623-54139642 MsG0480021133.01.T01:intron 5.0%
!! TTTATTAAAAAAGTTTAATT+TGG + Chr4:54136047-54136066 None:intergenic 5.0%
!!! AAAATTCTTTAAAAATAAAT+TGG - Chr4:54135928-54135947 MsG0480021133.01.T01:CDS 5.0%
!!! AAGTAAATTTTTTTTTTATA+GGG + Chr4:54134588-54134607 None:intergenic 5.0%
!!! CTTTTATATTATATATAATT+TGG + Chr4:54137182-54137201 None:intergenic 5.0%
!!! TAAGTAAATTTTTTTTTTAT+AGG + Chr4:54134589-54134608 None:intergenic 5.0%
ACCTTCACCCATCAACATCC+AGG - Chr4:54135213-54135232 MsG0480021133.01.T01:intron 50.0%
AGACTTACCCTTGGTCCTAG+AGG + Chr4:54139463-54139482 None:intergenic 50.0%
ATAGAGGGGAAGTTGAGTGG+AGG - Chr4:54137900-54137919 MsG0480021133.01.T01:intron 50.0%
GAATCCGGTAGTAGGTAGGT+TGG - Chr4:54135774-54135793 MsG0480021133.01.T01:intron 50.0%
GTGGAAAACTACTCCGACTC+AGG + Chr4:54134004-54134023 None:intergenic 50.0%
GTGGTAGAGGACCAAGTATC+TGG - Chr4:54135187-54135206 MsG0480021133.01.T01:intron 50.0%
TATAGGTTAAGGTGCGCGCA+AGG - Chr4:54139087-54139106 MsG0480021133.01.T01:intron 50.0%
TCTAGCCCAACATGTTTGGG+TGG - Chr4:54138397-54138416 MsG0480021133.01.T01:intron 50.0%
! ACCTGGATGTTGATGGGTGA+AGG + Chr4:54135217-54135236 None:intergenic 50.0%
! CGGTGACACGATTTGGGATA+CGG + Chr4:54134235-54134254 None:intergenic 50.0%
!! ATGGAAGACCTCTAGGACCA+AGG - Chr4:54139452-54139471 MsG0480021133.01.T01:intron 50.0%
!! GTGAAGGTGTCCCAGATACT+TGG + Chr4:54135201-54135220 None:intergenic 50.0%
!! TCGGATACACCGTTTTGGAC+GGG - Chr4:54138876-54138895 MsG0480021133.01.T01:intron 50.0%
!! TGGAAGACCTCTAGGACCAA+GGG - Chr4:54139453-54139472 MsG0480021133.01.T01:intron 50.0%
GCAATGGGAACAACAGCACC+AGG - Chr4:54138367-54138386 MsG0480021133.01.T01:intron 55.0%
GCAGTACAGGAAGGTGGTAG+AGG - Chr4:54135174-54135193 MsG0480021133.01.T01:intron 55.0%
GCCCCAAAGATGAAGTCGTG+TGG + Chr4:54134023-54134042 None:intergenic 55.0%
! GAAGGTGCAGTACAGGAAGG+TGG - Chr4:54135168-54135187 MsG0480021133.01.T01:CDS 55.0%
! GTTGGGCTAGAACATCGACC+TGG + Chr4:54138388-54138407 None:intergenic 55.0%
!! AGGGCCGGCTCGAATGTAAA+GGG - Chr4:54140143-54140162 MsG0480021133.01.T01:intron 55.0%
!! CACGACTTCATCTTTGGGGC+AGG - Chr4:54134023-54134042 MsG0480021133.01.T01:three_prime_UTR 55.0%
!! CAGGGCCGGCTCGAATGTAA+AGG - Chr4:54140142-54140161 MsG0480021133.01.T01:intron 60.0%
!! CTTGGAGGGGCATTGCCCTG+AGG + Chr4:54139298-54139317 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 54133798 54140834 54133798 ID=MsG0480021133.01;Name=MsG0480021133.01
Chr4 mRNA 54133798 54140834 54133798 ID=MsG0480021133.01.T01;Parent=MsG0480021133.01;Name=MsG0480021133.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.1|0.09|1|1|1|11|518|463
Chr4 exon 54133798 54134487 54133798 ID=MsG0480021133.01.T01:exon:20171;Parent=MsG0480021133.01.T01
Chr4 exon 54134639 54134747 54134639 ID=MsG0480021133.01.T01:exon:20170;Parent=MsG0480021133.01.T01
Chr4 exon 54134885 54134987 54134885 ID=MsG0480021133.01.T01:exon:20169;Parent=MsG0480021133.01.T01
Chr4 exon 54135158 54135189 54135158 ID=MsG0480021133.01.T01:exon:20168;Parent=MsG0480021133.01.T01
Chr4 exon 54135341 54135444 54135341 ID=MsG0480021133.01.T01:exon:20167;Parent=MsG0480021133.01.T01
Chr4 exon 54135862 54135980 54135862 ID=MsG0480021133.01.T01:exon:20166;Parent=MsG0480021133.01.T01
Chr4 exon 54136125 54136371 54136125 ID=MsG0480021133.01.T01:exon:20165;Parent=MsG0480021133.01.T01
Chr4 exon 54136451 54136538 54136451 ID=MsG0480021133.01.T01:exon:20164;Parent=MsG0480021133.01.T01
Chr4 exon 54136651 54136728 54136651 ID=MsG0480021133.01.T01:exon:20163;Parent=MsG0480021133.01.T01
Chr4 exon 54136852 54136927 54136852 ID=MsG0480021133.01.T01:exon:20162;Parent=MsG0480021133.01.T01
Chr4 exon 54140571 54140834 54140571 ID=MsG0480021133.01.T01:exon:20161;Parent=MsG0480021133.01.T01
Chr4 CDS 54140571 54140834 54140571 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54136852 54136927 54136852 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54136651 54136728 54136651 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54136451 54136538 54136451 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54136125 54136371 54136125 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54135862 54135980 54135862 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54135341 54135444 54135341 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54135158 54135189 54135158 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54134885 54134987 54134885 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54134639 54134747 54134639 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 CDS 54134316 54134487 54134316 ID=MsG0480021133.01.T01:cds;Parent=MsG0480021133.01.T01
Chr4 three_prime_UTR 54133798 54134315 54133798 ID=MsG0480021133.01.T01:three_prime_utr;Parent=MsG0480021133.01.T01
Gene Sequence

>MsG0480021133.01.T01

ATGGATCGTAATAGGGGAAGTCCTCCTTCATGTATAAAGAGGCAGACACTAACACAAAAAAGTAAATTGGTCAAGCAGAACAAACCAAATATGGTATTCATTGGCTATTTCAATGTGGCCATGCTTGCTCTCTTTGTTGTTAGCTCAGTTACACTTACTTTCGCAAATGGAGTTGAAGTTTCAACTCCTCTTGATATCGGTAACCTGAGTCGGAGTAGTTTTCCACACGACTTCATCTTTGGGGCAGGATCGTCATCTTACCAAGAAGATGTTGGGATTGTGAAGGATCAGAATATGGATTCCTATAGATTCTCAATCGCTTGGCCAAGAGTACTCCCAAAGGGGAAGTTGAGTGGAGGCATAAATCATGAAGGAATCAAATATTACAACAACCTCATCAACGAATTGTTGGCTAATGATATACAACCATTCGTAACTCTTTTTCATTGGGATCTTCCCCAAGTCTTAGAAGACGAGTATGGTGGTTTCTTAAGCTCTGGCATAATAAATGATTTTCGAGACTATGCTGATCTTTGCTTCAAGGAATTTGGAGATAGAGTGAAGTACTGGGTTACATTTAACGAGCCATGGTTGTTTAGTAATGGTGGATATGCAATGGGAACAACAGCACCAGGTCGATGTTCTAGCCCAACATGTTTGGGTGGTAATTCTGGCACAGAACCTTATATAGTTACACATAATCAAATTCTTGCTCATGCAGAAGCTGTACATGTGTATAAGACCAAATATCAGGCATATCAAAAGGGCAAGATAGGCATAACATTGGTAACAAACTGGTTCATACCACTTGGAAACAATAGCATACCCGATCAAAAGGCTGCTAAGAGATCACTTGATTTCCAATTTGGATGGTTTATGGAACCACTAACAACCGGAGATTATCCTAAAAGCATGAGAGCCATAGTGAAAAACCGATTGCCTAAGTTTACTAAATTGCAATCAAAGCTAGTGAATGTTGAACAAAATGGAAGACCTCTAGGACCAAGGGCTGCTTCAATTTGGATATACGTTTATCCAAGAGGACTTCGAGATCTTTTGTTATACACCAAGGAGAAATACAACAATCCTGTGGTCTACATTACTGAAAATGGTATGAATGAATTCAACGATGCAACACTCCCCATAGAAGAAGCTCTTTTGGATACTTACAGAATTGATTACTATTACCGTCATTTCTTCTATATTCGTTCCGCAATCAAGGCCGGCTCGAATGTAAAGGGATTTTTCGCATGGTCATTTTTGGACTGTAATGAATGGTTTGCAGGCTTTACTGTTCGTTTTGGATTAAACTTTGTTGATTACAATGGTGGATTGAAGAGGTACCCAAAACTTTCTGCTCAATGGTACAAGAACTTTCTCAAAAGAAACTAG

Protein sequence

>MsG0480021133.01.T01

MDRNRGSPPSCIKRQTLTQKSKLVKQNKPNMVFIGYFNVAMLALFVVSSVTLTFANGVEVSTPLDIGNLSRSSFPHDFIFGAGSSSYQEDVGIVKDQNMDSYRFSIAWPRVLPKGKLSGGINHEGIKYYNNLINELLANDIQPFVTLFHWDLPQVLEDEYGGFLSSGIINDFRDYADLCFKEFGDRVKYWVTFNEPWLFSNGGYAMGTTAPGRCSSPTCLGGNSGTEPYIVTHNQILAHAEAVHVYKTKYQAYQKGKIGITLVTNWFIPLGNNSIPDQKAAKRSLDFQFGWFMEPLTTGDYPKSMRAIVKNRLPKFTKLQSKLVNVEQNGRPLGPRAASIWIYVYPRGLRDLLLYTKEKYNNPVVYITENGMNEFNDATLPIEEALLDTYRIDYYYRHFFYIRSAIKAGSNVKGFFAWSFLDCNEWFAGFTVRFGLNFVDYNGGLKRYPKLSAQWYKNFLKRN*