AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280008751.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008751.01.T01 MTR_2g049670 96.512 172 5 1 83 253 157 328 3.19e-80 244
MsG0280008751.01.T01 MTR_2g049670 91.892 74 6 0 1 74 1 74 3.03e-30 115
MsG0280008751.01.T01 MTR_5g091650 55.085 118 50 2 60 174 82 199 1.46e-33 122
MsG0280008751.01.T01 MTR_3g048280 52.542 118 50 2 44 160 77 189 3.22e-33 120
MsG0280008751.01.T01 MTR_5g091650 54.386 114 49 2 60 170 82 195 3.79e-33 119
MsG0280008751.01.T01 MTR_7g111600 61.905 84 31 1 84 166 160 243 3.89e-32 119
MsG0280008751.01.T01 MTR_7g111600 61.905 84 31 1 84 166 160 243 9.74e-32 119
MsG0280008751.01.T01 MTR_1g084820 64.634 82 29 0 81 162 417 498 2.93e-31 121
MsG0280008751.01.T01 MTR_1g084820 64.634 82 29 0 81 162 417 498 2.95e-31 121
MsG0280008751.01.T01 MTR_7g111600 61.905 84 31 1 84 166 160 243 4.23e-31 117
MsG0280008751.01.T01 MTR_8g085390 46.212 132 67 2 71 201 17 145 7.38e-30 110
MsG0280008751.01.T01 MTR_8g088120 62.500 80 29 1 92 170 56 135 8.29e-30 111
MsG0280008751.01.T01 MTR_8g089400 52.941 102 44 3 81 178 34 135 7.60e-28 104
MsG0280008751.01.T01 MTR_8g089400 52.941 102 44 3 81 178 54 155 2.44e-27 103
MsG0280008751.01.T01 MTR_5g097420 55.814 86 36 2 84 167 30 115 3.30e-25 96.7
MsG0280008751.01.T01 MTR_4g132280 55.056 89 38 2 84 170 382 470 7.60e-25 103
MsG0280008751.01.T01 MTR_8g085440 50.000 84 41 1 84 166 32 115 3.87e-24 94.0
MsG0280008751.01.T01 MTR_4g079530 43.511 131 64 5 74 200 25 149 1.82e-23 94.0
MsG0280008751.01.T01 MTR_8g085400 54.023 87 38 1 79 165 28 112 2.53e-23 91.7
MsG0280008751.01.T01 MTR_4g133735 49.451 91 44 2 79 167 23 113 8.04e-23 90.5
MsG0280008751.01.T01 MTR_8g085720 49.541 109 50 4 78 181 358 466 1.12e-22 96.7
MsG0280008751.01.T01 MTR_4g079530 50.515 97 44 3 74 166 25 121 1.54e-22 90.1
MsG0280008751.01.T01 MTR_1g056640 52.273 88 40 2 81 166 403 490 4.59e-22 95.1
MsG0280008751.01.T01 MTR_5g085580 50.000 88 42 2 81 166 379 466 6.71e-22 94.4
MsG0280008751.01.T01 MTR_8g085420 50.000 80 39 1 84 162 32 111 1.08e-21 88.2
MsG0280008751.01.T01 MTR_4g133730 47.253 91 46 2 79 167 23 113 1.26e-21 87.4
MsG0280008751.01.T01 MTR_1g116870 48.810 84 42 1 84 166 276 359 1.43e-21 92.4
MsG0280008751.01.T01 MTR_3g083580 45.745 94 49 2 78 169 356 449 1.97e-20 90.1
MsG0280008751.01.T01 MTR_1g031900 50.000 88 42 2 84 169 361 448 1.25e-19 87.8
MsG0280008751.01.T01 MTR_4g069940 41.739 115 58 3 59 171 357 464 2.45e-19 87.0
MsG0280008751.01.T01 MTR_6g088885 43.333 90 48 2 80 166 365 454 3.09e-19 87.0
MsG0280008751.01.T01 MTR_5g015720 42.520 127 53 5 44 166 304 414 3.23e-19 86.3
MsG0280008751.01.T01 MTR_3g082080 50.000 78 38 1 84 160 157 234 3.25e-19 84.3
MsG0280008751.01.T01 MTR_1g031900 50.000 86 41 2 84 167 361 446 3.36e-19 86.7
MsG0280008751.01.T01 MTR_1g022160 45.882 85 45 1 84 167 391 475 3.48e-19 86.7
MsG0280008751.01.T01 MTR_8g102340 48.235 85 42 2 84 166 334 418 3.66e-19 86.7
MsG0280008751.01.T01 MTR_5g044530 48.649 74 37 1 81 153 19 92 3.96e-19 84.3
MsG0280008751.01.T01 MTR_4g083500 42.553 94 53 1 83 175 401 494 4.54e-19 86.3
MsG0280008751.01.T01 MTR_1g022160 47.619 84 43 1 84 166 391 474 5.09e-19 86.3
MsG0280008751.01.T01 MTR_5g078200 47.059 85 43 2 84 166 327 411 2.99e-18 84.0
MsG0280008751.01.T01 MTR_5g078200 47.059 85 43 2 84 166 360 444 3.15e-18 84.0
MsG0280008751.01.T01 MTR_3g065460 46.591 88 45 2 81 166 358 445 8.71e-18 82.4
MsG0280008751.01.T01 MTR_4g109490 44.706 85 45 2 83 166 23 106 2.66e-17 78.6
MsG0280008751.01.T01 MTR_1g022160 48.052 77 39 1 84 159 391 467 2.97e-17 80.9
MsG0280008751.01.T01 MTR_4g083070 47.436 78 40 1 84 160 21 98 1.14e-16 76.3
MsG0280008751.01.T01 MTR_4g088155 43.333 90 49 2 81 168 370 459 1.78e-15 75.9
MsG0280008751.01.T01 MTR_3g116510 38.202 89 54 1 84 171 371 459 3.52e-15 74.7
MsG0280008751.01.T01 MTR_3g116510 38.202 89 54 1 84 171 237 325 3.77e-15 73.9
MsG0280008751.01.T01 MTR_7g053500 43.333 90 49 2 81 168 294 383 5.49e-15 73.9
MsG0280008751.01.T01 MTR_7g053500 43.333 90 49 2 81 168 371 460 5.96e-15 74.3
MsG0280008751.01.T01 MTR_8g012400 37.864 103 55 3 68 168 365 460 6.80e-15 73.9
MsG0280008751.01.T01 MTR_8g012400 37.864 103 55 3 68 168 285 380 8.18e-15 73.6
MsG0280008751.01.T01 MTR_7g026340 37.209 86 53 1 82 166 363 448 8.90e-14 70.9
MsG0280008751.01.T01 MTR_2g072500 41.111 90 51 2 79 167 3 91 3.80e-13 63.9
MsG0280008751.01.T01 MTR_4g134280 40.000 90 44 5 83 166 251 336 5.98e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280008751.01.T01 AT1G29380 69.318 88 26 1 83 169 147 234 2.35e-38 135
MsG0280008751.01.T01 AT1G29380 48.555 173 83 3 83 253 147 315 1.30e-37 134
MsG0280008751.01.T01 AT2G30933 60.417 96 37 1 80 174 78 173 3.97e-35 125
MsG0280008751.01.T01 AT1G29380 67.500 80 25 1 83 161 147 226 2.63e-33 120
MsG0280008751.01.T01 AT1G29380 67.500 80 25 1 83 161 147 226 2.63e-33 120
MsG0280008751.01.T01 AT2G30933 60.976 82 31 1 80 160 78 159 4.08e-30 110
MsG0280008751.01.T01 AT2G30933 60.976 82 31 1 80 160 78 159 4.08e-30 110
MsG0280008751.01.T01 AT1G09460 63.095 84 30 1 81 164 134 216 5.36e-30 114
MsG0280008751.01.T01 AT4G05430 42.276 123 66 3 54 174 21 140 2.33e-25 98.6
MsG0280008751.01.T01 AT4G13600 45.238 126 55 4 84 195 61 186 4.21e-25 99.8
MsG0280008751.01.T01 AT4G05430 43.590 117 61 3 60 174 2 115 8.75e-25 96.3
MsG0280008751.01.T01 AT5G35740 52.809 89 37 4 83 167 29 116 2.36e-24 94.4
MsG0280008751.01.T01 AT4G34480 44.554 101 49 2 67 166 242 336 1.08e-22 95.9
MsG0280008751.01.T01 AT1G11820 52.809 89 40 2 84 170 381 469 1.19e-22 96.7
MsG0280008751.01.T01 AT4G34480 44.554 101 49 2 67 166 353 447 1.34e-22 96.7
MsG0280008751.01.T01 AT1G18650 40.800 125 72 2 78 201 15 138 2.84e-22 90.9
MsG0280008751.01.T01 AT4G26830 50.000 88 42 2 81 166 368 455 3.06e-22 95.5
MsG0280008751.01.T01 AT4G26830 50.000 88 42 2 81 166 364 451 3.21e-22 95.1
MsG0280008751.01.T01 AT2G05790 47.059 119 53 4 50 166 358 468 4.76e-22 94.7
MsG0280008751.01.T01 AT5G63250 46.154 91 45 2 82 168 40 130 5.40e-22 88.6
MsG0280008751.01.T01 AT2G42930 48.276 87 44 1 84 170 40 125 6.81e-22 88.6
MsG0280008751.01.T01 AT1G18650 44.681 94 51 1 77 169 14 107 8.82e-22 88.2
MsG0280008751.01.T01 AT5G55180 50.000 88 42 2 81 166 369 456 2.38e-21 92.8
MsG0280008751.01.T01 AT3G58100 47.191 89 45 2 84 170 41 129 4.15e-21 87.8
MsG0280008751.01.T01 AT5G67460 45.192 104 49 3 65 166 280 377 4.56e-21 91.3
MsG0280008751.01.T01 AT1G79480 46.429 84 44 1 84 166 310 393 5.19e-21 91.3
MsG0280008751.01.T01 AT1G79480 46.429 84 44 1 84 166 311 394 5.39e-21 91.3
MsG0280008751.01.T01 AT1G66250 49.438 89 43 2 84 170 368 456 7.23e-21 91.7
MsG0280008751.01.T01 AT5G61130 41.129 124 72 1 78 200 15 138 7.94e-21 87.4
MsG0280008751.01.T01 AT2G04910 47.727 88 44 2 82 167 13 100 1.20e-20 84.3
MsG0280008751.01.T01 AT4G05430 43.925 107 55 3 56 160 23 126 1.52e-20 84.7
MsG0280008751.01.T01 AT3G58100 47.191 89 45 2 84 170 117 205 2.34e-20 87.4
MsG0280008751.01.T01 AT2G01630 49.451 91 44 2 84 172 360 450 3.23e-20 89.7
MsG0280008751.01.T01 AT5G24318 34.483 145 76 4 31 169 188 319 3.32e-20 88.2
MsG0280008751.01.T01 AT5G24318 34.483 145 76 4 31 169 327 458 4.31e-20 89.4
MsG0280008751.01.T01 AT4G29360 48.837 86 42 2 83 166 400 485 8.83e-20 88.6
MsG0280008751.01.T01 AT4G29360 48.837 86 42 2 83 166 390 475 9.48e-20 88.6
MsG0280008751.01.T01 AT1G66855 43.023 86 47 2 84 167 26 111 1.99e-19 81.3
MsG0280008751.01.T01 AT1G66870 44.578 83 44 2 84 164 26 108 2.25e-19 81.3
MsG0280008751.01.T01 AT1G66870 44.578 83 44 2 84 164 53 135 2.77e-19 81.6
MsG0280008751.01.T01 AT5G63225 44.706 85 46 1 83 166 24 108 3.07e-19 80.9
MsG0280008751.01.T01 AT1G66852 42.683 82 46 1 84 164 26 107 4.53e-19 80.5
MsG0280008751.01.T01 AT5G63240 40.594 101 56 2 72 168 28 128 5.10e-19 80.9
MsG0280008751.01.T01 AT2G16230 42.857 84 47 1 84 166 366 449 5.86e-19 86.3
MsG0280008751.01.T01 AT3G55430 36.190 105 57 2 72 166 345 449 9.09e-19 85.5
MsG0280008751.01.T01 AT5G67460 45.918 98 45 3 65 160 280 371 1.00e-18 84.7
MsG0280008751.01.T01 AT5G56590 47.059 85 43 2 84 166 369 453 1.14e-18 85.1
MsG0280008751.01.T01 AT5G55180 50.602 83 39 2 81 161 369 451 1.92e-18 84.3
MsG0280008751.01.T01 AT1G11820 51.899 79 36 2 84 160 381 459 2.59e-18 84.0
MsG0280008751.01.T01 AT3G13560 41.739 115 62 4 79 190 357 469 8.51e-18 82.8
MsG0280008751.01.T01 AT3G13560 41.739 115 62 4 79 190 357 469 8.51e-18 82.8
MsG0280008751.01.T01 AT3G13560 41.739 115 62 4 79 190 357 469 8.51e-18 82.8
MsG0280008751.01.T01 AT3G13560 41.739 115 62 4 79 190 357 469 8.51e-18 82.8
MsG0280008751.01.T01 AT3G13560 41.739 115 62 4 79 190 357 469 8.51e-18 82.8
MsG0280008751.01.T01 AT2G01630 50.633 79 37 2 84 160 360 438 9.68e-18 82.4
MsG0280008751.01.T01 AT4G09462 37.209 86 53 1 84 168 29 114 6.99e-17 74.7
MsG0280008751.01.T01 AT5G24318 34.559 136 70 4 31 160 327 449 1.41e-16 79.0
MsG0280008751.01.T01 AT1G69295 48.193 83 40 3 84 164 21 102 1.44e-16 76.6
MsG0280008751.01.T01 AT2G04910 46.341 82 42 2 82 161 13 94 1.88e-16 73.9
MsG0280008751.01.T01 AT1G69295 48.718 78 38 2 84 160 17 93 2.25e-16 75.9
MsG0280008751.01.T01 AT4G09465 36.047 86 54 1 84 168 31 116 2.41e-16 73.2
MsG0280008751.01.T01 AT4G09467 36.047 86 54 1 84 168 31 116 2.90e-16 73.2
MsG0280008751.01.T01 AT4G09464 36.047 86 54 1 84 168 31 116 2.90e-16 73.2
MsG0280008751.01.T01 AT1G26450 38.037 163 67 7 85 223 22 174 6.89e-16 74.3
MsG0280008751.01.T01 AT5G08000 42.529 87 49 1 81 166 37 123 1.35e-15 73.9
MsG0280008751.01.T01 AT5G63230 38.824 85 51 1 83 166 25 109 1.57e-15 70.9
MsG0280008751.01.T01 AT3G07320 44.444 90 48 2 81 168 368 457 4.73e-15 74.7
MsG0280008751.01.T01 AT4G16165 38.372 86 51 2 84 167 26 111 5.07e-15 69.7
MsG0280008751.01.T01 AT5G08000 42.857 84 47 1 84 166 21 104 5.25e-15 71.6
MsG0280008751.01.T01 AT4G09090 36.782 87 54 1 83 168 30 116 6.43e-15 69.7
MsG0280008751.01.T01 AT3G23770 43.333 90 49 2 81 168 384 473 1.22e-14 73.6
MsG0280008751.01.T01 AT4G09466 33.721 86 56 1 84 168 31 116 2.02e-14 68.2
MsG0280008751.01.T01 AT2G29735 41.573 89 49 2 79 164 26 114 6.23e-14 67.0
MsG0280008751.01.T01 AT5G53610 41.667 84 47 2 84 166 28 110 1.00e-13 66.2
MsG0280008751.01.T01 AT5G53600 39.286 84 49 2 84 166 29 111 1.36e-13 65.9
MsG0280008751.01.T01 AT2G39640 34.066 91 59 1 82 171 458 548 4.90e-13 68.9
MsG0280008751.01.T01 AT2G39640 34.483 87 56 1 79 164 354 440 3.11e-12 66.2
MsG0280008751.01.T01 AT2G03505 37.179 78 48 1 84 160 21 98 6.66e-13 65.5
MsG0280008751.01.T01 AT2G03505 37.179 78 48 1 84 160 21 98 6.66e-13 65.5
MsG0280008751.01.T01 AT2G03505 37.179 78 48 1 84 160 21 98 6.66e-13 65.5
MsG0280008751.01.T01 AT2G03505 37.179 78 48 1 84 160 21 98 7.25e-13 63.9
MsG0280008751.01.T01 AT1G13830 37.805 82 50 1 81 161 32 113 8.58e-13 65.9
MsG0280008751.01.T01 AT2G19440 42.045 88 43 5 83 166 361 444 1.07e-12 67.8
MsG0280008751.01.T01 AT2G19440 42.045 88 43 5 83 166 361 444 1.07e-12 67.8
MsG0280008751.01.T01 AT1G13830 37.975 79 48 1 84 161 21 99 1.95e-12 64.7
MsG0280008751.01.T01 AT1G78520 38.824 85 50 2 84 167 32 115 3.42e-12 62.0
MsG0280008751.01.T01 AT2G43670 36.264 91 56 2 81 170 32 121 3.98e-11 59.3
MsG0280008751.01.T01 AT1G64760 39.773 88 45 5 83 166 365 448 7.16e-11 62.4
MsG0280008751.01.T01 AT1G64760 39.773 88 45 5 83 166 365 448 7.16e-11 62.4

Find 87 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGATCTTTCAAAGTATT+TGG 0.103855 2:+37699644 None:intergenic
TTTAGCATTAGCAGATTTAT+AGG 0.211938 2:-37698712 MsG0280008751.01.T01:three_prime_UTR
CCTCCTGTTCCTGGTGTTGT+AGG 0.230252 2:+37700617 None:intergenic
AGAAGTTGATGTAGCTATAT+TGG 0.257371 2:+37698991 None:intergenic
TTGGATTATGCTTGTGGATA+TGG 0.261053 2:-37699710 MsG0280008751.01.T01:CDS
GCACCTACAAGTTGTGTATT+TGG 0.264956 2:-37699584 MsG0280008751.01.T01:CDS
AGATTATCTATTTCAGATAA+AGG 0.268892 2:-37698640 MsG0280008751.01.T01:three_prime_UTR
ATAAATCTGCTAATGCTAAA+TGG 0.271823 2:+37698715 None:intergenic
TATAAATTCTCACCTTGTTT+TGG 0.275538 2:+37699249 None:intergenic
AGCTGCAGAGACTACTTTAA+AGG 0.280134 2:-37699738 MsG0280008751.01.T01:CDS
TGAATCTTCTCTTAATCTTA+TGG 0.280733 2:+37700688 None:intergenic
GAAGTTGATGTAGCTATATT+GGG 0.302042 2:+37698992 None:intergenic
GACTACTTTAAAGGTAGCTT+TGG 0.305217 2:-37699729 MsG0280008751.01.T01:CDS
GCATAGCTATTGATTGAATA+TGG 0.315916 2:-37698571 MsG0280008751.01.T01:three_prime_UTR
GTTTGTCCAGTACTTGTATC+AGG 0.327363 2:+37700554 None:intergenic
AGAAATTAAACCTCAAGAAA+TGG 0.330880 2:-37701652 MsG0280008751.01.T01:exon
GATAACTAAATATTATTTCA+TGG 0.335055 2:+37698539 None:intergenic
CATGATCTTTCAAAGTATTT+GGG 0.337641 2:+37699645 None:intergenic
TAAGGATTTCCTCCTGTTCC+TGG 0.340078 2:+37700608 None:intergenic
GATTATCTATTTCAGATAAA+GGG 0.350069 2:-37698639 MsG0280008751.01.T01:three_prime_UTR
TGGAATTCACACAGTCTTCC+AGG 0.351476 2:-37698844 MsG0280008751.01.T01:three_prime_UTR
CCTCCAAATACACAACTTGT+AGG 0.370834 2:+37699581 None:intergenic
ATATTACACCGACCCTTGAT+TGG 0.375131 2:-37698864 MsG0280008751.01.T01:three_prime_UTR
GGAGATGTTGGGTTTATAGT+AGG 0.382143 2:+37700584 None:intergenic
GTTTATGAGCAATGTTTAAG+AGG 0.385649 2:+37701702 None:intergenic
GTTGGGTTTATAGTAGGATA+AGG 0.392906 2:+37700590 None:intergenic
CTTAGTTGCAAGAATTCATA+TGG 0.399617 2:+37698775 None:intergenic
GGATCATCTGGTGGTGGTGG+TGG 0.399836 2:-37699788 MsG0280008751.01.T01:CDS
GCTATATTGGGGCTTCCTCC+TGG 0.414020 2:+37699004 None:intergenic
TCAGGTGGTTGAGGAGATGT+TGG 0.416066 2:+37700572 None:intergenic
CTCCTGTTCCTGGTGTTGTA+GGG 0.421839 2:+37700618 None:intergenic
CAGGTGGTTGAGGAGATGTT+GGG 0.426565 2:+37700573 None:intergenic
GGAGGATCATCATCAGTCTA+TGG 0.429914 2:-37699034 MsG0280008751.01.T01:CDS
GAAATTAAACCTCAAGAAAT+GGG 0.433845 2:-37701651 MsG0280008751.01.T01:exon
GTGGTGTCATACTGCTTGGT+GGG 0.437280 2:+37699083 None:intergenic
TGAAATCTTGCAAAATCTCC+TGG 0.440152 2:+37698826 None:intergenic
AACCCTACAACACCAGGAAC+AGG 0.450399 2:-37700620 MsG0280008751.01.T01:CDS
TCTATATTGTTTCAGGTCAT+GGG 0.468762 2:-37699291 MsG0280008751.01.T01:intron
CTTGGTGGGGTCATAGTAGT+AGG 0.472356 2:+37699097 None:intergenic
CTTCTAGCTCCCATTTCTTG+AGG 0.477633 2:+37701642 None:intergenic
GGTGGTGTCATACTGCTTGG+TGG 0.479946 2:+37699082 None:intergenic
ACACCAGGAACAGGATCATC+TGG 0.485638 2:-37699800 MsG0280008751.01.T01:intron
GGTGTTGTAGGGTTCACAAT+AGG 0.490997 2:+37700629 None:intergenic
GATGATCCTCCATCAGCATC+AGG 0.496560 2:+37699046 None:intergenic
ACAGGATCATCTGGTGGTGG+TGG 0.506368 2:-37699791 MsG0280008751.01.T01:CDS
GTAGCTTTGGATTATGCTTG+TGG 0.506964 2:-37699716 MsG0280008751.01.T01:CDS
GACTGTGTGAATTCCAATCA+AGG 0.510660 2:+37698851 None:intergenic
CTAGGTGGAGTCATAGTAGT+TGG 0.526635 2:+37699121 None:intergenic
CTTGGTGGTGTCATACTGCT+TGG 0.530201 2:+37699079 None:intergenic
TCAGTCTATGGTTCACCACC+AGG 0.530618 2:-37699022 MsG0280008751.01.T01:CDS
AATAAAATCACACTGAACAG+AGG 0.539930 2:+37701586 None:intergenic
GCATCAGGCATTGTCATGCT+TGG 0.540422 2:+37699061 None:intergenic
GCACATGAAGTGTAGCATAG+AGG 0.541615 2:+37698939 None:intergenic
AAGAAATGGGAGCTAGAAGT+TGG 0.544857 2:-37701638 MsG0280008751.01.T01:exon
GTACTTGTATCAGGTGGTTG+AGG 0.550652 2:+37700563 None:intergenic
TCAGGCATTGTCATGCTTGG+TGG 0.555903 2:+37699064 None:intergenic
GCTATTGATTGAATATGGAA+TGG 0.558429 2:-37698566 MsG0280008751.01.T01:three_prime_UTR
CATTGACATGTGTCAGACAC+TGG 0.559610 2:-37698892 MsG0280008751.01.T01:three_prime_UTR
ACATTGCTCATAAACTTGAA+AGG 0.561393 2:-37701694 MsG0280008751.01.T01:five_prime_UTR
TGTAGTGAGTAGTAGCAGAA+TGG 0.563778 2:+37698964 None:intergenic
GTGGAGTCATAGTAGTTGGT+GGG 0.565923 2:+37699125 None:intergenic
CCTACAAGTTGTGTATTTGG+AGG 0.565962 2:-37699581 MsG0280008751.01.T01:CDS
AATACACAACTTGTAGGTGC+AGG 0.573202 2:+37699587 None:intergenic
GGTGGAGTCATAGTAGTTGG+TGG 0.575064 2:+37699124 None:intergenic
TGTCCAGTACTTGTATCAGG+TGG 0.578521 2:+37700557 None:intergenic
ATAAAATCACACTGAACAGA+GGG 0.593843 2:+37701587 None:intergenic
TAATACTATTGATGAAAACA+TGG 0.598528 2:-37698608 MsG0280008751.01.T01:three_prime_UTR
GTTGGTGGGCTTACAAATGT+TGG 0.600377 2:+37699139 None:intergenic
GGGGTCATAGTAGTAGGACT+AGG 0.609330 2:+37699103 None:intergenic
ATGACAATGCCTGATGCTGA+TGG 0.613075 2:-37699055 MsG0280008751.01.T01:CDS
AAGTTGATGTAGCTATATTG+GGG 0.613710 2:+37698993 None:intergenic
ACTTCTCATCCTCCAAAACA+AGG 0.615141 2:-37699261 MsG0280008751.01.T01:intron
GGTGGGCTTACAAATGTTGG+TGG 0.618577 2:+37699142 None:intergenic
GGAACAGGATCATCTGGTGG+TGG 0.620332 2:-37699794 MsG0280008751.01.T01:CDS
ATTGTGAACCCTACAACACC+AGG 0.620914 2:-37700626 MsG0280008751.01.T01:CDS
CCTACAACACCAGGAACAGG+AGG 0.624591 2:-37700617 MsG0280008751.01.T01:CDS
TAAATGGATACATTGATGCA+AGG 0.637168 2:+37698731 None:intergenic
TGGTGTCATACTGCTTGGTG+GGG 0.639890 2:+37699084 None:intergenic
ATATTGGGGCTTCCTCCTGG+TGG 0.641948 2:+37699007 None:intergenic
GTCATAGTAGTAGGACTAGG+TGG 0.650747 2:+37699106 None:intergenic
TGTGAATTCCAATCAAGGGT+CGG 0.656464 2:+37698856 None:intergenic
ACTGTGTGAATTCCAATCAA+GGG 0.659940 2:+37698852 None:intergenic
TGTTCACAACTTCAACAAGG+TGG 0.679957 2:-37699680 MsG0280008751.01.T01:CDS
ACAATGCCTGATGCTGATGG+AGG 0.696819 2:-37699052 MsG0280008751.01.T01:CDS
CCAGGAACAGGATCATCTGG+TGG 0.699045 2:-37699797 MsG0280008751.01.T01:intron
GATTGTTCACAACTTCAACA+AGG 0.703651 2:-37699683 MsG0280008751.01.T01:CDS
GTCTATGGTTCACCACCAGG+AGG 0.724042 2:-37699019 MsG0280008751.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTATGGATTAATTT+TGG + Chr2:37699180-37699199 None:intergenic 10.0%
!! GATAACTAAATATTATTTCA+TGG + Chr2:37701750-37701769 None:intergenic 15.0%
!!! AAAAATTAAGTTGTATGTAT+TGG - Chr2:37698960-37698979 MsG0280008751.01.T01:CDS 15.0%
!!! ATATCTTATTTTTGTTTTAC+AGG - Chr2:37699565-37699584 MsG0280008751.01.T01:CDS 15.0%
!! AACTTATTCATTATTCAATC+AGG - Chr2:37699504-37699523 MsG0280008751.01.T01:intron 20.0%
!! AGATTATCTATTTCAGATAA+AGG - Chr2:37701646-37701665 MsG0280008751.01.T01:exon 20.0%
!! ATCATGATGAATTGATATTA+AGG + Chr2:37700786-37700805 None:intergenic 20.0%
!! GATTATCTATTTCAGATAAA+GGG - Chr2:37701647-37701666 MsG0280008751.01.T01:exon 20.0%
!! TAATACTATTGATGAAAACA+TGG - Chr2:37701678-37701697 MsG0280008751.01.T01:five_prime_UTR 20.0%
!!! AGTTTTATGCAATACTAATA+AGG + Chr2:37701081-37701100 None:intergenic 20.0%
!!! GTTATTTTCTATATTGTTTC+AGG - Chr2:37700988-37701007 MsG0280008751.01.T01:intron 20.0%
!!! TATTTTTGTTTTACAGGTTT+AGG - Chr2:37699571-37699590 MsG0280008751.01.T01:CDS 20.0%
! AACTTGATTTAGATCATGTT+TGG + Chr2:37700960-37700979 None:intergenic 25.0%
! AAGGACAATACATATATTAG+AGG + Chr2:37701108-37701127 None:intergenic 25.0%
! AATTCATCATGATCATTGAA+CGG - Chr2:37700793-37700812 MsG0280008751.01.T01:intron 25.0%
! AGAAATTAAACCTCAAGAAA+TGG - Chr2:37698634-37698653 MsG0280008751.01.T01:three_prime_UTR 25.0%
! AGATATTCATACAACATTGA+AGG - Chr2:37700760-37700779 MsG0280008751.01.T01:intron 25.0%
! ATAAATCTGCTAATGCTAAA+TGG + Chr2:37701574-37701593 None:intergenic 25.0%
! ATTCACTGAATAAGTGAATT+AGG - Chr2:37699474-37699493 MsG0280008751.01.T01:intron 25.0%
! GAAATTAAACCTCAAGAAAT+GGG - Chr2:37698635-37698654 MsG0280008751.01.T01:three_prime_UTR 25.0%
! TATACTTCTCTACGTTTAAT+AGG - Chr2:37698752-37698771 MsG0280008751.01.T01:three_prime_UTR 25.0%
! TGAATCTTCTCTTAATCTTA+TGG + Chr2:37699601-37699620 None:intergenic 25.0%
! TGTTGTATGAATATCTTACT+TGG + Chr2:37700756-37700775 None:intergenic 25.0%
! TTTAGCATTAGCAGATTTAT+AGG - Chr2:37701574-37701593 MsG0280008751.01.T01:intron 25.0%
!! CATGATCTTTCAAAGTATTT+GGG + Chr2:37700644-37700663 None:intergenic 25.0%
!! GTAGAGAAGTATATATTGAA+AGG + Chr2:37698745-37698764 None:intergenic 25.0%
!!! AGCATGATCTTTAAAGTATT+TGG + Chr2:37700117-37700136 None:intergenic 25.0%
!!! GCATGATCTTTAAAGTATTT+GGG + Chr2:37700116-37700135 None:intergenic 25.0%
!!! TATAAATTCTCACCTTGTTT+TGG + Chr2:37701040-37701059 None:intergenic 25.0%
!!! TGGTACATGACTTATTTTTA+TGG + Chr2:37699191-37699210 None:intergenic 25.0%
AATAAAATCACACTGAACAG+AGG + Chr2:37698703-37698722 None:intergenic 30.0%
AATAGTTGTGTTGTGTGATA+AGG - Chr2:37698802-37698821 MsG0280008751.01.T01:three_prime_UTR 30.0%
ACAATCCAAAATGACAACAT+TGG - Chr2:37699238-37699257 MsG0280008751.01.T01:intron 30.0%
ACATTGCTCATAAACTTGAA+AGG - Chr2:37698592-37698611 MsG0280008751.01.T01:three_prime_UTR 30.0%
AGAAAAAACAAGCATGTACA+TGG + Chr2:37699211-37699230 None:intergenic 30.0%
ATAAAATCACACTGAACAGA+GGG + Chr2:37698702-37698721 None:intergenic 30.0%
CATCATGATCATTAACGTAT+TGG - Chr2:37700264-37700283 MsG0280008751.01.T01:intron 30.0%
CTTAGTTGCAAGAATTCATA+TGG + Chr2:37701514-37701533 None:intergenic 30.0%
GACATAGCAAAAATAAGACA+AGG + Chr2:37698676-37698695 None:intergenic 30.0%
GATCATGATGAATGCTATTA+AGG + Chr2:37700254-37700273 None:intergenic 30.0%
GTTTATGAGCAATGTTTAAG+AGG + Chr2:37698587-37698606 None:intergenic 30.0%
TAAATGGATACATTGATGCA+AGG + Chr2:37701558-37701577 None:intergenic 30.0%
TAAGGCGAATATGATATAAG+TGG + Chr2:37701063-37701082 None:intergenic 30.0%
! CTATGATACAGATTTTATCG+TGG + Chr2:37699441-37699460 None:intergenic 30.0%
! GCATAGCTATTGATTGAATA+TGG - Chr2:37701715-37701734 MsG0280008751.01.T01:five_prime_UTR 30.0%
! GCATGATCTTTCAAAGTATT+TGG + Chr2:37700645-37700664 None:intergenic 30.0%
! GCTATTGATTGAATATGGAA+TGG - Chr2:37701720-37701739 MsG0280008751.01.T01:five_prime_UTR 30.0%
! TCTATATTGTTTCAGGTCAT+GGG - Chr2:37700995-37701014 MsG0280008751.01.T01:intron 30.0%
! TTCTATATTGTTTCAGGTCA+TGG - Chr2:37700994-37701013 MsG0280008751.01.T01:intron 30.0%
!! AAGTTGATGTAGCTATATTG+GGG + Chr2:37701296-37701315 None:intergenic 30.0%
!! AGAAGTTGATGTAGCTATAT+TGG + Chr2:37701298-37701317 None:intergenic 30.0%
!! GAAGTTGATGTAGCTATATT+GGG + Chr2:37701297-37701316 None:intergenic 30.0%
!! TGAATCCAATGTTGTCATTT+TGG + Chr2:37699246-37699265 None:intergenic 30.0%
AAGTCGAGGAATATCTTACT+TGG + Chr2:37700226-37700245 None:intergenic 35.0%
ACATGTGTTAATGTTGTGTC+AGG + Chr2:37700853-37700872 None:intergenic 35.0%
ACTGTGTGAATTCCAATCAA+GGG + Chr2:37701437-37701456 None:intergenic 35.0%
ATCTGCAGAGACTACTTTAA+AGG - Chr2:37700022-37700041 MsG0280008751.01.T01:intron 35.0%
CCTACAAATACACAACTTGT+AGG + Chr2:37700179-37700198 None:intergenic 35.0%
CCTACAAGTTGTGTATTTGT+AGG - Chr2:37700176-37700195 MsG0280008751.01.T01:intron 35.0%
GATTGTTCACAACTTCAACA+AGG - Chr2:37700603-37700622 MsG0280008751.01.T01:CDS 35.0%
GTTGGGTTTATAGTAGGATA+AGG + Chr2:37699699-37699718 None:intergenic 35.0%
TAATATTACGACCGAGATCA+TGG + Chr2:37699327-37699346 None:intergenic 35.0%
TGAAATCTTGCAAAATCTCC+TGG + Chr2:37701463-37701482 None:intergenic 35.0%
TGATCTCGGTCGTAATATTA+AGG - Chr2:37699327-37699346 MsG0280008751.01.T01:intron 35.0%
TGTTGTGTGATAAGGAGTTA+AGG - Chr2:37698810-37698829 MsG0280008751.01.T01:three_prime_UTR 35.0%
TTGAAACATGTAAAGCTGCA+GGG - Chr2:37698899-37698918 MsG0280008751.01.T01:three_prime_UTR 35.0%
TTGGATTATGCTTGTGGATA+TGG - Chr2:37700576-37700595 MsG0280008751.01.T01:CDS 35.0%
TTGTAACACAACTGTGATTG+AGG - Chr2:37699367-37699386 MsG0280008751.01.T01:intron 35.0%
TTGTTGGAGTTGTTGTAGTT+GGG + Chr2:37699908-37699927 None:intergenic 35.0%
! AGACTACTTTAAAGGTAGCT+TGG - Chr2:37700030-37700049 MsG0280008751.01.T01:intron 35.0%
! CTTGGATTATGCTTTGGATA+TGG - Chr2:37700048-37700067 MsG0280008751.01.T01:intron 35.0%
! GACTACTTTAAAGGTAGCTT+TGG - Chr2:37700031-37700050 MsG0280008751.01.T01:intron 35.0%
! GATACAGATTTTATCGTGGT+GGG + Chr2:37699437-37699456 None:intergenic 35.0%
! GGTTTGAGTATGGATTTGTT+GGG + Chr2:37699788-37699807 None:intergenic 35.0%
! TGATACAGATTTTATCGTGG+TGG + Chr2:37699438-37699457 None:intergenic 35.0%
!! ATGGATTTGTTGAACTTGGT+GGG + Chr2:37699869-37699888 None:intergenic 35.0%
!! GAGTATGGATTTGTTGAACT+TGG + Chr2:37699873-37699892 None:intergenic 35.0%
!! TATGGATTTGTTGAACTTGG+TGG + Chr2:37699870-37699889 None:intergenic 35.0%
!!! AAATTCTCACCTTGTTTTGG+AGG + Chr2:37701037-37701056 None:intergenic 35.0%
AAGAAATGGGAGCTAGAAGT+TGG - Chr2:37698648-37698667 MsG0280008751.01.T01:three_prime_UTR 40.0%
AATACACAACTTGTAGGTGC+AGG + Chr2:37700173-37700192 None:intergenic 40.0%
ACTTCTCATCCTCCAAAACA+AGG - Chr2:37701025-37701044 MsG0280008751.01.T01:intron 40.0%
AGCTGCAGAGACTACTTTAA+AGG - Chr2:37700548-37700567 MsG0280008751.01.T01:intron 40.0%
AGGTAGCTTGGATTATGCTT+TGG - Chr2:37700042-37700061 MsG0280008751.01.T01:intron 40.0%
ATAGGACACATCCATGATCT+CGG - Chr2:37699313-37699332 MsG0280008751.01.T01:intron 40.0%
ATATTACACCGACCCTTGAT+TGG - Chr2:37701422-37701441 MsG0280008751.01.T01:intron 40.0%
ATGGATTTGTAGAAGCTGGT+GGG + Chr2:37699839-37699858 None:intergenic 40.0%
CCTACAAGTTGTGTATTTGG+AGG - Chr2:37700705-37700724 MsG0280008751.01.T01:intron 40.0%
CCTCCAAATACACAACTTGT+AGG + Chr2:37700708-37700727 None:intergenic 40.0%
CGCGGTTAAATTCAGTTGAA+CGG + Chr2:37699393-37699412 None:intergenic 40.0%
CTATTAAGGACTTCAAGTCG+AGG + Chr2:37700240-37700259 None:intergenic 40.0%
CTTGTTGGAGTTGTTGTAGT+TGG + Chr2:37699909-37699928 None:intergenic 40.0%
GACTGTGTGAATTCCAATCA+AGG + Chr2:37701438-37701457 None:intergenic 40.0%
GAGTATGGATTTGTAGAAGC+TGG + Chr2:37699843-37699862 None:intergenic 40.0%
GCACCTACAAGTTGTGTATT+TGG - Chr2:37700173-37700192 MsG0280008751.01.T01:intron 40.0%
GGAGATGTTGGGTTTATAGT+AGG + Chr2:37699705-37699724 None:intergenic 40.0%
GGGTTTGAGTATGGATTTGT+TGG + Chr2:37699789-37699808 None:intergenic 40.0%
GTTGAAACATGTAAAGCTGC+AGG - Chr2:37698898-37698917 MsG0280008751.01.T01:three_prime_UTR 40.0%
GTTTGAATAGGGACTTGTAG+AGG + Chr2:37699817-37699836 None:intergenic 40.0%
GTTTGTCCAGTACTTGTATC+AGG + Chr2:37699735-37699754 None:intergenic 40.0%
TATGGATTTGTAGAAGCTGG+TGG + Chr2:37699840-37699859 None:intergenic 40.0%
TGTAGTGAGTAGTAGCAGAA+TGG + Chr2:37701325-37701344 None:intergenic 40.0%
TGTGAATTCCAATCAAGGGT+CGG + Chr2:37701433-37701452 None:intergenic 40.0%
TGTTCACAACTTCAACAAGG+TGG - Chr2:37700606-37700625 MsG0280008751.01.T01:CDS 40.0%
! TTGTTGTAGTTGGGCTTGTT+GGG + Chr2:37699899-37699918 None:intergenic 40.0%
!! GTAGCTTTGGATTATGCTTG+TGG - Chr2:37700570-37700589 MsG0280008751.01.T01:CDS 40.0%
!!! TTGTTTTGGAGGATGAGAAG+TGG + Chr2:37701026-37701045 None:intergenic 40.0%
ATGACAATGCCTGATGCTGA+TGG - Chr2:37701231-37701250 MsG0280008751.01.T01:intron 45.0%
ATGGATGTGTCCTATGACTG+CGG + Chr2:37699308-37699327 None:intergenic 45.0%
ATTGTGAACCCTACAACACC+AGG - Chr2:37699660-37699679 MsG0280008751.01.T01:CDS 45.0%
CAACCACCTGATACAAGTAC+TGG - Chr2:37699726-37699745 MsG0280008751.01.T01:CDS 45.0%
CATTGACATGTGTCAGACAC+TGG - Chr2:37701394-37701413 MsG0280008751.01.T01:intron 45.0%
CTAGGTGGAGTCATAGTAGT+TGG + Chr2:37701168-37701187 None:intergenic 45.0%
GAATAGGGACTTGTAGAGGT+TGG + Chr2:37699813-37699832 None:intergenic 45.0%
GATCATTGAACGGTAGTGTC+TGG - Chr2:37700803-37700822 MsG0280008751.01.T01:intron 45.0%
GCACATGAAGTGTAGCATAG+AGG + Chr2:37701350-37701369 None:intergenic 45.0%
GGAGGATCATCATCAGTCTA+TGG - Chr2:37701252-37701271 MsG0280008751.01.T01:intron 45.0%
GGTCAGACACTGATACATGT+CGG + Chr2:37700832-37700851 None:intergenic 45.0%
GTACTTGTATCAGGTGGTTG+AGG + Chr2:37699726-37699745 None:intergenic 45.0%
GTCATAGTAGTAGGACTAGG+TGG + Chr2:37701183-37701202 None:intergenic 45.0%
GTGGAGTCATAGTAGTTGGT+GGG + Chr2:37701164-37701183 None:intergenic 45.0%
GTGTTGTAGGAGTCACAGTT+GGG + Chr2:37700470-37700489 None:intergenic 45.0%
GTGTTGTGGGAGTCACATTT+GGG + Chr2:37699932-37699951 None:intergenic 45.0%
GTTGTTGTAGTTGGGCTTGT+TGG + Chr2:37699900-37699919 None:intergenic 45.0%
TAAGGATTTCCTCCTGTTCC+TGG + Chr2:37699681-37699700 None:intergenic 45.0%
TGGAATTCACACAGTCTTCC+AGG - Chr2:37701442-37701461 MsG0280008751.01.T01:intron 45.0%
TGGACTCATGCTGTAATGCA+AGG + Chr2:37701127-37701146 None:intergenic 45.0%
TGGTGGGATCTTCGATCTTA+TGG + Chr2:37699421-37699440 None:intergenic 45.0%
TGTCCAGTACTTGTATCAGG+TGG + Chr2:37699732-37699751 None:intergenic 45.0%
TTCGATCTTATGGCAGATCG+CGG + Chr2:37699411-37699430 None:intergenic 45.0%
! GGTGTTGTAGGGTTCACAAT+AGG + Chr2:37699660-37699679 None:intergenic 45.0%
! GTTTTCCATTCCGCAGTCAT+AGG - Chr2:37699295-37699314 MsG0280008751.01.T01:intron 45.0%
!! AGAAGCTGGTGGGTTTGAAT+AGG + Chr2:37699829-37699848 None:intergenic 45.0%
!! CTTCTAGCTCCCATTTCTTG+AGG + Chr2:37698647-37698666 None:intergenic 45.0%
!! GAACTTGGTGGGTTTGAGTA+TGG + Chr2:37699858-37699877 None:intergenic 45.0%
!! GAAGCTGGTGGGTTTGAATA+GGG + Chr2:37699828-37699847 None:intergenic 45.0%
!! GTTGGTGGGCTTACAAATGT+TGG + Chr2:37701150-37701169 None:intergenic 45.0%
!!! TTATTTATTTTTAAATACTT+TGG - Chr2:37698718-37698737 MsG0280008751.01.T01:three_prime_UTR 5.0%
AACCCTACAACACCAGGAAC+AGG - Chr2:37699666-37699685 MsG0280008751.01.T01:CDS 50.0%
AATGTGACTCCCACAACACC+AGG - Chr2:37699933-37699952 MsG0280008751.01.T01:intron 50.0%
ACAATGCCTGATGCTGATGG+AGG - Chr2:37701234-37701253 MsG0280008751.01.T01:intron 50.0%
ACACCAGGAACAGGATCATC+TGG - Chr2:37699948-37699967 MsG0280008751.01.T01:intron 50.0%
ACTCCTACAACACCAGGAAC+AGG - Chr2:37700477-37700496 MsG0280008751.01.T01:intron 50.0%
ACTGTGACTCCTACAACACC+AGG - Chr2:37700471-37700490 MsG0280008751.01.T01:intron 50.0%
CAGGTGGTTGAGGAGATGTT+GGG + Chr2:37699716-37699735 None:intergenic 50.0%
CTTGGTGGGGTCATAGTAGT+AGG + Chr2:37701192-37701211 None:intergenic 50.0%
GATGATCCTCCATCAGCATC+AGG + Chr2:37701243-37701262 None:intergenic 50.0%
GGAGTCACATTTGGGCTTGT+TGG + Chr2:37699924-37699943 None:intergenic 50.0%
GGGGTCATAGTAGTAGGACT+AGG + Chr2:37701186-37701205 None:intergenic 50.0%
GGTGGAGTCATAGTAGTTGG+TGG + Chr2:37701165-37701184 None:intergenic 50.0%
TAGGGACTTGTAGAGGTTGG+TGG + Chr2:37699810-37699829 None:intergenic 50.0%
TCAGGTGGTTGAGGAGATGT+TGG + Chr2:37699717-37699736 None:intergenic 50.0%
TCAGTCTATGGTTCACCACC+AGG - Chr2:37701264-37701283 MsG0280008751.01.T01:intron 50.0%
TGTGTCCTATGACTGCGGAA+TGG + Chr2:37699303-37699322 None:intergenic 50.0%
! AGGGACTTGTAGAGGTTGGT+GGG + Chr2:37699809-37699828 None:intergenic 50.0%
! GCATCAGGCATTGTCATGCT+TGG + Chr2:37701228-37701247 None:intergenic 50.0%
! GGTGGGCTTACAAATGTTGG+TGG + Chr2:37701147-37701166 None:intergenic 50.0%
! GGTGTTGTAGGAGTCACAGT+TGG + Chr2:37700471-37700490 None:intergenic 50.0%
! GGTGTTGTGGGAGTCACATT+TGG + Chr2:37699933-37699952 None:intergenic 50.0%
! TCAGGCATTGTCATGCTTGG+TGG + Chr2:37701225-37701244 None:intergenic 50.0%
! TGATCCTGTTCCTGGTGTTG+TGG + Chr2:37699946-37699965 None:intergenic 50.0%
!! CTCCTGTTCCTGGTGTTGTA+GGG + Chr2:37699671-37699690 None:intergenic 50.0%
!! CTTGGTGGTGTCATACTGCT+TGG + Chr2:37701210-37701229 None:intergenic 50.0%
!! GAGGTTGGTGGGTTTGAGTA+TGG + Chr2:37699798-37699817 None:intergenic 50.0%
!! GATCCTGTTCCTGGTGTTGT+AGG + Chr2:37699945-37699964 None:intergenic 50.0%
!! GATCCTGTTCCTGGTGTTGT+GGG + Chr2:37699945-37699964 None:intergenic 50.0%
!! GGGCTTGTTGGGTTTGAGTA+TGG + Chr2:37699888-37699907 None:intergenic 50.0%
!! GTGGTGTCATACTGCTTGGT+GGG + Chr2:37701206-37701225 None:intergenic 50.0%
!! TGGTGTCATACTGCTTGGTG+GGG + Chr2:37701205-37701224 None:intergenic 50.0%
ACTCCCACAACACCAGGAAC+AGG - Chr2:37699939-37699958 MsG0280008751.01.T01:intron 55.0%
ATATTGGGGCTTCCTCCTGG+TGG + Chr2:37701282-37701301 None:intergenic 55.0%
CCACCAGATGATCCTGTTCC+TGG + Chr2:37699954-37699973 None:intergenic 55.0%
CCAGGAACAGGATCATCTGG+TGG - Chr2:37699951-37699970 MsG0280008751.01.T01:intron 55.0%
CCTACAACACCAGGAACAGG+AGG - Chr2:37699669-37699688 MsG0280008751.01.T01:CDS 55.0%
GCTATATTGGGGCTTCCTCC+TGG + Chr2:37701285-37701304 None:intergenic 55.0%
GGAACAGGATCATCTGGTGG+TGG - Chr2:37699954-37699973 MsG0280008751.01.T01:intron 55.0%
GGAGTCACAGTTGGGCTTGT+TGG + Chr2:37700462-37700481 None:intergenic 55.0%
GTCTATGGTTCACCACCAGG+AGG - Chr2:37701267-37701286 MsG0280008751.01.T01:intron 55.0%
!! ACAGGATCATCTGGTGGTGG+TGG - Chr2:37699957-37699976 MsG0280008751.01.T01:intron 55.0%
!! CCTCCTGTTCCTGGTGTTGT+AGG + Chr2:37699672-37699691 None:intergenic 55.0%
!! GGCTTGTTGTGCCTGTGTCT+GGG + Chr2:37699767-37699786 None:intergenic 55.0%
!! GGTGGTGTCATACTGCTTGG+TGG + Chr2:37701207-37701226 None:intergenic 55.0%
GTGGTGTGTGTGGTGGTCAG+TGG - Chr2:37699982-37700001 MsG0280008751.01.T01:intron 60.0%
GTTGTGCCTGTGTCTGGGCT+TGG + Chr2:37699762-37699781 None:intergenic 60.0%
! TGCCTGTGTCTGGGCTTGGT+GGG + Chr2:37699758-37699777 None:intergenic 60.0%
!! GGATCATCTGGTGGTGGTGG+TGG - Chr2:37699960-37699979 MsG0280008751.01.T01:intron 60.0%
!! GGGCTTGTTGTGCCTGTGTC+TGG + Chr2:37699768-37699787 None:intergenic 60.0%
!! TCATCTGGTGGTGGTGGTGG+TGG - Chr2:37699963-37699982 MsG0280008751.01.T01:intron 60.0%
ACCCCACCAAGCCCAGACAC+AGG - Chr2:37699753-37699772 MsG0280008751.01.T01:CDS 65.0%
GTGCCTGTGTCTGGGCTTGG+TGG + Chr2:37699759-37699778 None:intergenic 65.0%
!! GCCTGTGTCTGGGCTTGGTG+GGG + Chr2:37699757-37699776 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGTGTG+TGG - Chr2:37699972-37699991 MsG0280008751.01.T01:intron 65.0%
!! GGTGGTGGTGGTGTGTGTGG+TGG - Chr2:37699975-37699994 MsG0280008751.01.T01:intron 65.0%
!! GTGGTGGTGGTGGTGGTCAG+TGG - Chr2:37700508-37700527 MsG0280008751.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 37698539 37701769 37698539 ID=MsG0280008751.01;Name=MsG0280008751.01
Chr2 mRNA 37698539 37701769 37698539 ID=MsG0280008751.01.T01;Parent=MsG0280008751.01;Name=MsG0280008751.01.T01;_AED=0.23;_eAED=0.23;_QI=114|0.75|0.6|1|0.5|0.6|5|386|253
Chr2 exon 37698539 37699171 37698539 ID=MsG0280008751.01.T01:exon:9736;Parent=MsG0280008751.01.T01
Chr2 exon 37699262 37699298 37699262 ID=MsG0280008751.01.T01:exon:9735;Parent=MsG0280008751.01.T01
Chr2 exon 37699552 37699815 37699552 ID=MsG0280008751.01.T01:exon:9734;Parent=MsG0280008751.01.T01
Chr2 exon 37700567 37700721 37700567 ID=MsG0280008751.01.T01:exon:9733;Parent=MsG0280008751.01.T01
Chr2 exon 37701597 37701769 37701597 ID=MsG0280008751.01.T01:exon:9732;Parent=MsG0280008751.01.T01
Chr2 five_prime_UTR 37701656 37701769 37701656 ID=MsG0280008751.01.T01:five_prime_utr;Parent=MsG0280008751.01.T01
Chr2 CDS 37701597 37701655 37701597 ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01
Chr2 CDS 37700567 37700721 37700567 ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01
Chr2 CDS 37699552 37699815 37699552 ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01
Chr2 CDS 37699262 37699298 37699262 ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01
Chr2 CDS 37698925 37699171 37698925 ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01
Chr2 three_prime_UTR 37698539 37698924 37698539 ID=MsG0280008751.01.T01:three_prime_utr;Parent=MsG0280008751.01.T01
Gene Sequence

>MsG0280008751.01.T01

ATGGGAGCTAGAAGTTGGCACCTTGTCTTATTTTTGCTATGTCTTTCCCTCTGTTCAGTGTTTAGGACAGCCATAAGATTAAGAGAAGATTCATCATATGAATTTAGTACAACTCAATCAGATTCAATTCCTATTGTGAACCCTACAACACCAGGAACAGGAGGAAATCCTTATCCTACTATAAACCCAACATCTCCTCAACCACCTGATACAAGAACAGGATCATCTGGTGGTGGTGGTGGTGGTCAGTGGTGTGTTGCAAGTGAATCAGCTGCAGAGACTACTTTAAAGGTAGCTTTGGATTATGCTTGTGGATATGGTGCAGATTGTTCACAACTTCAACAAGGTGGAGCTTGTTATGACCCAAATACTTTGAAAGATCATGCTTCTTATGCATTCAATGATTACTATCAAAAGAATCCTGCACCTACAAGTTGTGTATTTGGAGGAGTAGCATCACTCACAAGCAAAGATCCAAGTCATGGGAATTGCCACTTCTCATCCTCCAAAACAAGCATGAGTCCACCAACATTTGTAAGCCCACCAACTACTATGACTCCACCTAGTCCTACTACTATGACCCCACCAAGCAGTATGACACCACCAAGCATGACAATGCCTGATGCTGATGGAGGATCATCATCAGTCTATGGTTCACCACCAGGAGGAAGCCCCAATATAGCTACATCAACTTCTTATTCCATTCTGCTACTACTCACTACAAGCCTCTATGCTACACTTCATGTGCAAAATTATGTCTAG

Protein sequence

>MsG0280008751.01.T01

MGARSWHLVLFLLCLSLCSVFRTAIRLREDSSYEFSTTQSDSIPIVNPTTPGTGGNPYPTINPTSPQPPDTRTGSSGGGGGGQWCVASESAAETTLKVALDYACGYGADCSQLQQGGACYDPNTLKDHASYAFNDYYQKNPAPTSCVFGGVASLTSKDPSHGNCHFSSSKTSMSPPTFVSPPTTMTPPSPTTMTPPSSMTPPSMTMPDADGGSSSVYGSPPGGSPNIATSTSYSILLLLTTSLYATLHVQNYV*