Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008751.01.T01 | XP_004488326.1 | 64.038 | 317 | 47 | 10 | 1 | 253 | 1 | 314 | 1.68E-104 | 315 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008751.01.T01 | O65399 | 52.809 | 89 | 40 | 2 | 84 | 170 | 381 | 469 | 1.17E-21 | 96.7 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008751.01.T01 | A0A1S2XEZ2 | 64.038 | 317 | 47 | 10 | 1 | 253 | 1 | 314 | 8.04e-105 | 315 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000984.01 | MsG0280008751.01 | 0.886063 | 4.736535e-72 | 3.331602e-68 |
MsG0180005678.01 | MsG0280008751.01 | 0.864514 | 1.151592e-64 | 3.625050e-61 |
MsG0180005924.01 | MsG0280008751.01 | 0.814565 | 1.444378e-51 | 9.725210e-49 |
MsG0280006924.01 | MsG0280008751.01 | 0.881141 | 3.070112e-70 | 1.777989e-66 |
MsG0280008751.01 | MsG0380016875.01 | 0.812761 | 3.602553e-51 | 2.310102e-48 |
MsG0280008751.01 | MsG0480022977.01 | 0.804272 | 2.339213e-49 | 1.200946e-46 |
MsG0280008751.01 | MsG0580025970.01 | 0.830088 | 3.576385e-55 | 3.729843e-52 |
MsG0280008751.01 | MsG0580028098.01 | 0.803111 | 4.073250e-49 | 2.029716e-46 |
MsG0280008751.01 | MsG0580028884.01 | 0.825363 | 4.882376e-54 | 4.440561e-51 |
MsG0280008751.01 | MsG0580029739.01 | 0.868878 | 4.707221e-66 | 1.730344e-62 |
MsG0280008751.01 | MsG0880043920.01 | 0.876980 | 9.063331e-69 | 4.482331e-65 |
MsG0280008751.01 | MsG0880045090.01 | 0.812046 | 5.163040e-51 | 3.247885e-48 |
MsG0280008751.01 | MsG0880047080.01 | 0.829266 | 5.668069e-55 | 5.772696e-52 |
MsG0280008751.01 | MsG0880047228.01 | 0.826265 | 2.982751e-54 | 2.783494e-51 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008751.01.T01 | MTR_2g049670 | 96.512 | 172 | 5 | 1 | 83 | 253 | 157 | 328 | 3.19e-80 | 244 |
MsG0280008751.01.T01 | MTR_2g049670 | 91.892 | 74 | 6 | 0 | 1 | 74 | 1 | 74 | 3.03e-30 | 115 |
MsG0280008751.01.T01 | MTR_5g091650 | 55.085 | 118 | 50 | 2 | 60 | 174 | 82 | 199 | 1.46e-33 | 122 |
MsG0280008751.01.T01 | MTR_3g048280 | 52.542 | 118 | 50 | 2 | 44 | 160 | 77 | 189 | 3.22e-33 | 120 |
MsG0280008751.01.T01 | MTR_5g091650 | 54.386 | 114 | 49 | 2 | 60 | 170 | 82 | 195 | 3.79e-33 | 119 |
MsG0280008751.01.T01 | MTR_7g111600 | 61.905 | 84 | 31 | 1 | 84 | 166 | 160 | 243 | 3.89e-32 | 119 |
MsG0280008751.01.T01 | MTR_7g111600 | 61.905 | 84 | 31 | 1 | 84 | 166 | 160 | 243 | 9.74e-32 | 119 |
MsG0280008751.01.T01 | MTR_1g084820 | 64.634 | 82 | 29 | 0 | 81 | 162 | 417 | 498 | 2.93e-31 | 121 |
MsG0280008751.01.T01 | MTR_1g084820 | 64.634 | 82 | 29 | 0 | 81 | 162 | 417 | 498 | 2.95e-31 | 121 |
MsG0280008751.01.T01 | MTR_7g111600 | 61.905 | 84 | 31 | 1 | 84 | 166 | 160 | 243 | 4.23e-31 | 117 |
MsG0280008751.01.T01 | MTR_8g085390 | 46.212 | 132 | 67 | 2 | 71 | 201 | 17 | 145 | 7.38e-30 | 110 |
MsG0280008751.01.T01 | MTR_8g088120 | 62.500 | 80 | 29 | 1 | 92 | 170 | 56 | 135 | 8.29e-30 | 111 |
MsG0280008751.01.T01 | MTR_8g089400 | 52.941 | 102 | 44 | 3 | 81 | 178 | 34 | 135 | 7.60e-28 | 104 |
MsG0280008751.01.T01 | MTR_8g089400 | 52.941 | 102 | 44 | 3 | 81 | 178 | 54 | 155 | 2.44e-27 | 103 |
MsG0280008751.01.T01 | MTR_5g097420 | 55.814 | 86 | 36 | 2 | 84 | 167 | 30 | 115 | 3.30e-25 | 96.7 |
MsG0280008751.01.T01 | MTR_4g132280 | 55.056 | 89 | 38 | 2 | 84 | 170 | 382 | 470 | 7.60e-25 | 103 |
MsG0280008751.01.T01 | MTR_8g085440 | 50.000 | 84 | 41 | 1 | 84 | 166 | 32 | 115 | 3.87e-24 | 94.0 |
MsG0280008751.01.T01 | MTR_4g079530 | 43.511 | 131 | 64 | 5 | 74 | 200 | 25 | 149 | 1.82e-23 | 94.0 |
MsG0280008751.01.T01 | MTR_8g085400 | 54.023 | 87 | 38 | 1 | 79 | 165 | 28 | 112 | 2.53e-23 | 91.7 |
MsG0280008751.01.T01 | MTR_4g133735 | 49.451 | 91 | 44 | 2 | 79 | 167 | 23 | 113 | 8.04e-23 | 90.5 |
MsG0280008751.01.T01 | MTR_8g085720 | 49.541 | 109 | 50 | 4 | 78 | 181 | 358 | 466 | 1.12e-22 | 96.7 |
MsG0280008751.01.T01 | MTR_4g079530 | 50.515 | 97 | 44 | 3 | 74 | 166 | 25 | 121 | 1.54e-22 | 90.1 |
MsG0280008751.01.T01 | MTR_1g056640 | 52.273 | 88 | 40 | 2 | 81 | 166 | 403 | 490 | 4.59e-22 | 95.1 |
MsG0280008751.01.T01 | MTR_5g085580 | 50.000 | 88 | 42 | 2 | 81 | 166 | 379 | 466 | 6.71e-22 | 94.4 |
MsG0280008751.01.T01 | MTR_8g085420 | 50.000 | 80 | 39 | 1 | 84 | 162 | 32 | 111 | 1.08e-21 | 88.2 |
MsG0280008751.01.T01 | MTR_4g133730 | 47.253 | 91 | 46 | 2 | 79 | 167 | 23 | 113 | 1.26e-21 | 87.4 |
MsG0280008751.01.T01 | MTR_1g116870 | 48.810 | 84 | 42 | 1 | 84 | 166 | 276 | 359 | 1.43e-21 | 92.4 |
MsG0280008751.01.T01 | MTR_3g083580 | 45.745 | 94 | 49 | 2 | 78 | 169 | 356 | 449 | 1.97e-20 | 90.1 |
MsG0280008751.01.T01 | MTR_1g031900 | 50.000 | 88 | 42 | 2 | 84 | 169 | 361 | 448 | 1.25e-19 | 87.8 |
MsG0280008751.01.T01 | MTR_4g069940 | 41.739 | 115 | 58 | 3 | 59 | 171 | 357 | 464 | 2.45e-19 | 87.0 |
MsG0280008751.01.T01 | MTR_6g088885 | 43.333 | 90 | 48 | 2 | 80 | 166 | 365 | 454 | 3.09e-19 | 87.0 |
MsG0280008751.01.T01 | MTR_5g015720 | 42.520 | 127 | 53 | 5 | 44 | 166 | 304 | 414 | 3.23e-19 | 86.3 |
MsG0280008751.01.T01 | MTR_3g082080 | 50.000 | 78 | 38 | 1 | 84 | 160 | 157 | 234 | 3.25e-19 | 84.3 |
MsG0280008751.01.T01 | MTR_1g031900 | 50.000 | 86 | 41 | 2 | 84 | 167 | 361 | 446 | 3.36e-19 | 86.7 |
MsG0280008751.01.T01 | MTR_1g022160 | 45.882 | 85 | 45 | 1 | 84 | 167 | 391 | 475 | 3.48e-19 | 86.7 |
MsG0280008751.01.T01 | MTR_8g102340 | 48.235 | 85 | 42 | 2 | 84 | 166 | 334 | 418 | 3.66e-19 | 86.7 |
MsG0280008751.01.T01 | MTR_5g044530 | 48.649 | 74 | 37 | 1 | 81 | 153 | 19 | 92 | 3.96e-19 | 84.3 |
MsG0280008751.01.T01 | MTR_4g083500 | 42.553 | 94 | 53 | 1 | 83 | 175 | 401 | 494 | 4.54e-19 | 86.3 |
MsG0280008751.01.T01 | MTR_1g022160 | 47.619 | 84 | 43 | 1 | 84 | 166 | 391 | 474 | 5.09e-19 | 86.3 |
MsG0280008751.01.T01 | MTR_5g078200 | 47.059 | 85 | 43 | 2 | 84 | 166 | 327 | 411 | 2.99e-18 | 84.0 |
MsG0280008751.01.T01 | MTR_5g078200 | 47.059 | 85 | 43 | 2 | 84 | 166 | 360 | 444 | 3.15e-18 | 84.0 |
MsG0280008751.01.T01 | MTR_3g065460 | 46.591 | 88 | 45 | 2 | 81 | 166 | 358 | 445 | 8.71e-18 | 82.4 |
MsG0280008751.01.T01 | MTR_4g109490 | 44.706 | 85 | 45 | 2 | 83 | 166 | 23 | 106 | 2.66e-17 | 78.6 |
MsG0280008751.01.T01 | MTR_1g022160 | 48.052 | 77 | 39 | 1 | 84 | 159 | 391 | 467 | 2.97e-17 | 80.9 |
MsG0280008751.01.T01 | MTR_4g083070 | 47.436 | 78 | 40 | 1 | 84 | 160 | 21 | 98 | 1.14e-16 | 76.3 |
MsG0280008751.01.T01 | MTR_4g088155 | 43.333 | 90 | 49 | 2 | 81 | 168 | 370 | 459 | 1.78e-15 | 75.9 |
MsG0280008751.01.T01 | MTR_3g116510 | 38.202 | 89 | 54 | 1 | 84 | 171 | 371 | 459 | 3.52e-15 | 74.7 |
MsG0280008751.01.T01 | MTR_3g116510 | 38.202 | 89 | 54 | 1 | 84 | 171 | 237 | 325 | 3.77e-15 | 73.9 |
MsG0280008751.01.T01 | MTR_7g053500 | 43.333 | 90 | 49 | 2 | 81 | 168 | 294 | 383 | 5.49e-15 | 73.9 |
MsG0280008751.01.T01 | MTR_7g053500 | 43.333 | 90 | 49 | 2 | 81 | 168 | 371 | 460 | 5.96e-15 | 74.3 |
MsG0280008751.01.T01 | MTR_8g012400 | 37.864 | 103 | 55 | 3 | 68 | 168 | 365 | 460 | 6.80e-15 | 73.9 |
MsG0280008751.01.T01 | MTR_8g012400 | 37.864 | 103 | 55 | 3 | 68 | 168 | 285 | 380 | 8.18e-15 | 73.6 |
MsG0280008751.01.T01 | MTR_7g026340 | 37.209 | 86 | 53 | 1 | 82 | 166 | 363 | 448 | 8.90e-14 | 70.9 |
MsG0280008751.01.T01 | MTR_2g072500 | 41.111 | 90 | 51 | 2 | 79 | 167 | 3 | 91 | 3.80e-13 | 63.9 |
MsG0280008751.01.T01 | MTR_4g134280 | 40.000 | 90 | 44 | 5 | 83 | 166 | 251 | 336 | 5.98e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008751.01.T01 | AT1G29380 | 69.318 | 88 | 26 | 1 | 83 | 169 | 147 | 234 | 2.35e-38 | 135 |
MsG0280008751.01.T01 | AT1G29380 | 48.555 | 173 | 83 | 3 | 83 | 253 | 147 | 315 | 1.30e-37 | 134 |
MsG0280008751.01.T01 | AT2G30933 | 60.417 | 96 | 37 | 1 | 80 | 174 | 78 | 173 | 3.97e-35 | 125 |
MsG0280008751.01.T01 | AT1G29380 | 67.500 | 80 | 25 | 1 | 83 | 161 | 147 | 226 | 2.63e-33 | 120 |
MsG0280008751.01.T01 | AT1G29380 | 67.500 | 80 | 25 | 1 | 83 | 161 | 147 | 226 | 2.63e-33 | 120 |
MsG0280008751.01.T01 | AT2G30933 | 60.976 | 82 | 31 | 1 | 80 | 160 | 78 | 159 | 4.08e-30 | 110 |
MsG0280008751.01.T01 | AT2G30933 | 60.976 | 82 | 31 | 1 | 80 | 160 | 78 | 159 | 4.08e-30 | 110 |
MsG0280008751.01.T01 | AT1G09460 | 63.095 | 84 | 30 | 1 | 81 | 164 | 134 | 216 | 5.36e-30 | 114 |
MsG0280008751.01.T01 | AT4G05430 | 42.276 | 123 | 66 | 3 | 54 | 174 | 21 | 140 | 2.33e-25 | 98.6 |
MsG0280008751.01.T01 | AT4G13600 | 45.238 | 126 | 55 | 4 | 84 | 195 | 61 | 186 | 4.21e-25 | 99.8 |
MsG0280008751.01.T01 | AT4G05430 | 43.590 | 117 | 61 | 3 | 60 | 174 | 2 | 115 | 8.75e-25 | 96.3 |
MsG0280008751.01.T01 | AT5G35740 | 52.809 | 89 | 37 | 4 | 83 | 167 | 29 | 116 | 2.36e-24 | 94.4 |
MsG0280008751.01.T01 | AT4G34480 | 44.554 | 101 | 49 | 2 | 67 | 166 | 242 | 336 | 1.08e-22 | 95.9 |
MsG0280008751.01.T01 | AT1G11820 | 52.809 | 89 | 40 | 2 | 84 | 170 | 381 | 469 | 1.19e-22 | 96.7 |
MsG0280008751.01.T01 | AT4G34480 | 44.554 | 101 | 49 | 2 | 67 | 166 | 353 | 447 | 1.34e-22 | 96.7 |
MsG0280008751.01.T01 | AT1G18650 | 40.800 | 125 | 72 | 2 | 78 | 201 | 15 | 138 | 2.84e-22 | 90.9 |
MsG0280008751.01.T01 | AT4G26830 | 50.000 | 88 | 42 | 2 | 81 | 166 | 368 | 455 | 3.06e-22 | 95.5 |
MsG0280008751.01.T01 | AT4G26830 | 50.000 | 88 | 42 | 2 | 81 | 166 | 364 | 451 | 3.21e-22 | 95.1 |
MsG0280008751.01.T01 | AT2G05790 | 47.059 | 119 | 53 | 4 | 50 | 166 | 358 | 468 | 4.76e-22 | 94.7 |
MsG0280008751.01.T01 | AT5G63250 | 46.154 | 91 | 45 | 2 | 82 | 168 | 40 | 130 | 5.40e-22 | 88.6 |
MsG0280008751.01.T01 | AT2G42930 | 48.276 | 87 | 44 | 1 | 84 | 170 | 40 | 125 | 6.81e-22 | 88.6 |
MsG0280008751.01.T01 | AT1G18650 | 44.681 | 94 | 51 | 1 | 77 | 169 | 14 | 107 | 8.82e-22 | 88.2 |
MsG0280008751.01.T01 | AT5G55180 | 50.000 | 88 | 42 | 2 | 81 | 166 | 369 | 456 | 2.38e-21 | 92.8 |
MsG0280008751.01.T01 | AT3G58100 | 47.191 | 89 | 45 | 2 | 84 | 170 | 41 | 129 | 4.15e-21 | 87.8 |
MsG0280008751.01.T01 | AT5G67460 | 45.192 | 104 | 49 | 3 | 65 | 166 | 280 | 377 | 4.56e-21 | 91.3 |
MsG0280008751.01.T01 | AT1G79480 | 46.429 | 84 | 44 | 1 | 84 | 166 | 310 | 393 | 5.19e-21 | 91.3 |
MsG0280008751.01.T01 | AT1G79480 | 46.429 | 84 | 44 | 1 | 84 | 166 | 311 | 394 | 5.39e-21 | 91.3 |
MsG0280008751.01.T01 | AT1G66250 | 49.438 | 89 | 43 | 2 | 84 | 170 | 368 | 456 | 7.23e-21 | 91.7 |
MsG0280008751.01.T01 | AT5G61130 | 41.129 | 124 | 72 | 1 | 78 | 200 | 15 | 138 | 7.94e-21 | 87.4 |
MsG0280008751.01.T01 | AT2G04910 | 47.727 | 88 | 44 | 2 | 82 | 167 | 13 | 100 | 1.20e-20 | 84.3 |
MsG0280008751.01.T01 | AT4G05430 | 43.925 | 107 | 55 | 3 | 56 | 160 | 23 | 126 | 1.52e-20 | 84.7 |
MsG0280008751.01.T01 | AT3G58100 | 47.191 | 89 | 45 | 2 | 84 | 170 | 117 | 205 | 2.34e-20 | 87.4 |
MsG0280008751.01.T01 | AT2G01630 | 49.451 | 91 | 44 | 2 | 84 | 172 | 360 | 450 | 3.23e-20 | 89.7 |
MsG0280008751.01.T01 | AT5G24318 | 34.483 | 145 | 76 | 4 | 31 | 169 | 188 | 319 | 3.32e-20 | 88.2 |
MsG0280008751.01.T01 | AT5G24318 | 34.483 | 145 | 76 | 4 | 31 | 169 | 327 | 458 | 4.31e-20 | 89.4 |
MsG0280008751.01.T01 | AT4G29360 | 48.837 | 86 | 42 | 2 | 83 | 166 | 400 | 485 | 8.83e-20 | 88.6 |
MsG0280008751.01.T01 | AT4G29360 | 48.837 | 86 | 42 | 2 | 83 | 166 | 390 | 475 | 9.48e-20 | 88.6 |
MsG0280008751.01.T01 | AT1G66855 | 43.023 | 86 | 47 | 2 | 84 | 167 | 26 | 111 | 1.99e-19 | 81.3 |
MsG0280008751.01.T01 | AT1G66870 | 44.578 | 83 | 44 | 2 | 84 | 164 | 26 | 108 | 2.25e-19 | 81.3 |
MsG0280008751.01.T01 | AT1G66870 | 44.578 | 83 | 44 | 2 | 84 | 164 | 53 | 135 | 2.77e-19 | 81.6 |
MsG0280008751.01.T01 | AT5G63225 | 44.706 | 85 | 46 | 1 | 83 | 166 | 24 | 108 | 3.07e-19 | 80.9 |
MsG0280008751.01.T01 | AT1G66852 | 42.683 | 82 | 46 | 1 | 84 | 164 | 26 | 107 | 4.53e-19 | 80.5 |
MsG0280008751.01.T01 | AT5G63240 | 40.594 | 101 | 56 | 2 | 72 | 168 | 28 | 128 | 5.10e-19 | 80.9 |
MsG0280008751.01.T01 | AT2G16230 | 42.857 | 84 | 47 | 1 | 84 | 166 | 366 | 449 | 5.86e-19 | 86.3 |
MsG0280008751.01.T01 | AT3G55430 | 36.190 | 105 | 57 | 2 | 72 | 166 | 345 | 449 | 9.09e-19 | 85.5 |
MsG0280008751.01.T01 | AT5G67460 | 45.918 | 98 | 45 | 3 | 65 | 160 | 280 | 371 | 1.00e-18 | 84.7 |
MsG0280008751.01.T01 | AT5G56590 | 47.059 | 85 | 43 | 2 | 84 | 166 | 369 | 453 | 1.14e-18 | 85.1 |
MsG0280008751.01.T01 | AT5G55180 | 50.602 | 83 | 39 | 2 | 81 | 161 | 369 | 451 | 1.92e-18 | 84.3 |
MsG0280008751.01.T01 | AT1G11820 | 51.899 | 79 | 36 | 2 | 84 | 160 | 381 | 459 | 2.59e-18 | 84.0 |
MsG0280008751.01.T01 | AT3G13560 | 41.739 | 115 | 62 | 4 | 79 | 190 | 357 | 469 | 8.51e-18 | 82.8 |
MsG0280008751.01.T01 | AT3G13560 | 41.739 | 115 | 62 | 4 | 79 | 190 | 357 | 469 | 8.51e-18 | 82.8 |
MsG0280008751.01.T01 | AT3G13560 | 41.739 | 115 | 62 | 4 | 79 | 190 | 357 | 469 | 8.51e-18 | 82.8 |
MsG0280008751.01.T01 | AT3G13560 | 41.739 | 115 | 62 | 4 | 79 | 190 | 357 | 469 | 8.51e-18 | 82.8 |
MsG0280008751.01.T01 | AT3G13560 | 41.739 | 115 | 62 | 4 | 79 | 190 | 357 | 469 | 8.51e-18 | 82.8 |
MsG0280008751.01.T01 | AT2G01630 | 50.633 | 79 | 37 | 2 | 84 | 160 | 360 | 438 | 9.68e-18 | 82.4 |
MsG0280008751.01.T01 | AT4G09462 | 37.209 | 86 | 53 | 1 | 84 | 168 | 29 | 114 | 6.99e-17 | 74.7 |
MsG0280008751.01.T01 | AT5G24318 | 34.559 | 136 | 70 | 4 | 31 | 160 | 327 | 449 | 1.41e-16 | 79.0 |
MsG0280008751.01.T01 | AT1G69295 | 48.193 | 83 | 40 | 3 | 84 | 164 | 21 | 102 | 1.44e-16 | 76.6 |
MsG0280008751.01.T01 | AT2G04910 | 46.341 | 82 | 42 | 2 | 82 | 161 | 13 | 94 | 1.88e-16 | 73.9 |
MsG0280008751.01.T01 | AT1G69295 | 48.718 | 78 | 38 | 2 | 84 | 160 | 17 | 93 | 2.25e-16 | 75.9 |
MsG0280008751.01.T01 | AT4G09465 | 36.047 | 86 | 54 | 1 | 84 | 168 | 31 | 116 | 2.41e-16 | 73.2 |
MsG0280008751.01.T01 | AT4G09467 | 36.047 | 86 | 54 | 1 | 84 | 168 | 31 | 116 | 2.90e-16 | 73.2 |
MsG0280008751.01.T01 | AT4G09464 | 36.047 | 86 | 54 | 1 | 84 | 168 | 31 | 116 | 2.90e-16 | 73.2 |
MsG0280008751.01.T01 | AT1G26450 | 38.037 | 163 | 67 | 7 | 85 | 223 | 22 | 174 | 6.89e-16 | 74.3 |
MsG0280008751.01.T01 | AT5G08000 | 42.529 | 87 | 49 | 1 | 81 | 166 | 37 | 123 | 1.35e-15 | 73.9 |
MsG0280008751.01.T01 | AT5G63230 | 38.824 | 85 | 51 | 1 | 83 | 166 | 25 | 109 | 1.57e-15 | 70.9 |
MsG0280008751.01.T01 | AT3G07320 | 44.444 | 90 | 48 | 2 | 81 | 168 | 368 | 457 | 4.73e-15 | 74.7 |
MsG0280008751.01.T01 | AT4G16165 | 38.372 | 86 | 51 | 2 | 84 | 167 | 26 | 111 | 5.07e-15 | 69.7 |
MsG0280008751.01.T01 | AT5G08000 | 42.857 | 84 | 47 | 1 | 84 | 166 | 21 | 104 | 5.25e-15 | 71.6 |
MsG0280008751.01.T01 | AT4G09090 | 36.782 | 87 | 54 | 1 | 83 | 168 | 30 | 116 | 6.43e-15 | 69.7 |
MsG0280008751.01.T01 | AT3G23770 | 43.333 | 90 | 49 | 2 | 81 | 168 | 384 | 473 | 1.22e-14 | 73.6 |
MsG0280008751.01.T01 | AT4G09466 | 33.721 | 86 | 56 | 1 | 84 | 168 | 31 | 116 | 2.02e-14 | 68.2 |
MsG0280008751.01.T01 | AT2G29735 | 41.573 | 89 | 49 | 2 | 79 | 164 | 26 | 114 | 6.23e-14 | 67.0 |
MsG0280008751.01.T01 | AT5G53610 | 41.667 | 84 | 47 | 2 | 84 | 166 | 28 | 110 | 1.00e-13 | 66.2 |
MsG0280008751.01.T01 | AT5G53600 | 39.286 | 84 | 49 | 2 | 84 | 166 | 29 | 111 | 1.36e-13 | 65.9 |
MsG0280008751.01.T01 | AT2G39640 | 34.066 | 91 | 59 | 1 | 82 | 171 | 458 | 548 | 4.90e-13 | 68.9 |
MsG0280008751.01.T01 | AT2G39640 | 34.483 | 87 | 56 | 1 | 79 | 164 | 354 | 440 | 3.11e-12 | 66.2 |
MsG0280008751.01.T01 | AT2G03505 | 37.179 | 78 | 48 | 1 | 84 | 160 | 21 | 98 | 6.66e-13 | 65.5 |
MsG0280008751.01.T01 | AT2G03505 | 37.179 | 78 | 48 | 1 | 84 | 160 | 21 | 98 | 6.66e-13 | 65.5 |
MsG0280008751.01.T01 | AT2G03505 | 37.179 | 78 | 48 | 1 | 84 | 160 | 21 | 98 | 6.66e-13 | 65.5 |
MsG0280008751.01.T01 | AT2G03505 | 37.179 | 78 | 48 | 1 | 84 | 160 | 21 | 98 | 7.25e-13 | 63.9 |
MsG0280008751.01.T01 | AT1G13830 | 37.805 | 82 | 50 | 1 | 81 | 161 | 32 | 113 | 8.58e-13 | 65.9 |
MsG0280008751.01.T01 | AT2G19440 | 42.045 | 88 | 43 | 5 | 83 | 166 | 361 | 444 | 1.07e-12 | 67.8 |
MsG0280008751.01.T01 | AT2G19440 | 42.045 | 88 | 43 | 5 | 83 | 166 | 361 | 444 | 1.07e-12 | 67.8 |
MsG0280008751.01.T01 | AT1G13830 | 37.975 | 79 | 48 | 1 | 84 | 161 | 21 | 99 | 1.95e-12 | 64.7 |
MsG0280008751.01.T01 | AT1G78520 | 38.824 | 85 | 50 | 2 | 84 | 167 | 32 | 115 | 3.42e-12 | 62.0 |
MsG0280008751.01.T01 | AT2G43670 | 36.264 | 91 | 56 | 2 | 81 | 170 | 32 | 121 | 3.98e-11 | 59.3 |
MsG0280008751.01.T01 | AT1G64760 | 39.773 | 88 | 45 | 5 | 83 | 166 | 365 | 448 | 7.16e-11 | 62.4 |
MsG0280008751.01.T01 | AT1G64760 | 39.773 | 88 | 45 | 5 | 83 | 166 | 365 | 448 | 7.16e-11 | 62.4 |
Find 87 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATGATCTTTCAAAGTATT+TGG | 0.103855 | 2:+37699644 | None:intergenic |
TTTAGCATTAGCAGATTTAT+AGG | 0.211938 | 2:-37698712 | MsG0280008751.01.T01:three_prime_UTR |
CCTCCTGTTCCTGGTGTTGT+AGG | 0.230252 | 2:+37700617 | None:intergenic |
AGAAGTTGATGTAGCTATAT+TGG | 0.257371 | 2:+37698991 | None:intergenic |
TTGGATTATGCTTGTGGATA+TGG | 0.261053 | 2:-37699710 | MsG0280008751.01.T01:CDS |
GCACCTACAAGTTGTGTATT+TGG | 0.264956 | 2:-37699584 | MsG0280008751.01.T01:CDS |
AGATTATCTATTTCAGATAA+AGG | 0.268892 | 2:-37698640 | MsG0280008751.01.T01:three_prime_UTR |
ATAAATCTGCTAATGCTAAA+TGG | 0.271823 | 2:+37698715 | None:intergenic |
TATAAATTCTCACCTTGTTT+TGG | 0.275538 | 2:+37699249 | None:intergenic |
AGCTGCAGAGACTACTTTAA+AGG | 0.280134 | 2:-37699738 | MsG0280008751.01.T01:CDS |
TGAATCTTCTCTTAATCTTA+TGG | 0.280733 | 2:+37700688 | None:intergenic |
GAAGTTGATGTAGCTATATT+GGG | 0.302042 | 2:+37698992 | None:intergenic |
GACTACTTTAAAGGTAGCTT+TGG | 0.305217 | 2:-37699729 | MsG0280008751.01.T01:CDS |
GCATAGCTATTGATTGAATA+TGG | 0.315916 | 2:-37698571 | MsG0280008751.01.T01:three_prime_UTR |
GTTTGTCCAGTACTTGTATC+AGG | 0.327363 | 2:+37700554 | None:intergenic |
AGAAATTAAACCTCAAGAAA+TGG | 0.330880 | 2:-37701652 | MsG0280008751.01.T01:exon |
GATAACTAAATATTATTTCA+TGG | 0.335055 | 2:+37698539 | None:intergenic |
CATGATCTTTCAAAGTATTT+GGG | 0.337641 | 2:+37699645 | None:intergenic |
TAAGGATTTCCTCCTGTTCC+TGG | 0.340078 | 2:+37700608 | None:intergenic |
GATTATCTATTTCAGATAAA+GGG | 0.350069 | 2:-37698639 | MsG0280008751.01.T01:three_prime_UTR |
TGGAATTCACACAGTCTTCC+AGG | 0.351476 | 2:-37698844 | MsG0280008751.01.T01:three_prime_UTR |
CCTCCAAATACACAACTTGT+AGG | 0.370834 | 2:+37699581 | None:intergenic |
ATATTACACCGACCCTTGAT+TGG | 0.375131 | 2:-37698864 | MsG0280008751.01.T01:three_prime_UTR |
GGAGATGTTGGGTTTATAGT+AGG | 0.382143 | 2:+37700584 | None:intergenic |
GTTTATGAGCAATGTTTAAG+AGG | 0.385649 | 2:+37701702 | None:intergenic |
GTTGGGTTTATAGTAGGATA+AGG | 0.392906 | 2:+37700590 | None:intergenic |
CTTAGTTGCAAGAATTCATA+TGG | 0.399617 | 2:+37698775 | None:intergenic |
GGATCATCTGGTGGTGGTGG+TGG | 0.399836 | 2:-37699788 | MsG0280008751.01.T01:CDS |
GCTATATTGGGGCTTCCTCC+TGG | 0.414020 | 2:+37699004 | None:intergenic |
TCAGGTGGTTGAGGAGATGT+TGG | 0.416066 | 2:+37700572 | None:intergenic |
CTCCTGTTCCTGGTGTTGTA+GGG | 0.421839 | 2:+37700618 | None:intergenic |
CAGGTGGTTGAGGAGATGTT+GGG | 0.426565 | 2:+37700573 | None:intergenic |
GGAGGATCATCATCAGTCTA+TGG | 0.429914 | 2:-37699034 | MsG0280008751.01.T01:CDS |
GAAATTAAACCTCAAGAAAT+GGG | 0.433845 | 2:-37701651 | MsG0280008751.01.T01:exon |
GTGGTGTCATACTGCTTGGT+GGG | 0.437280 | 2:+37699083 | None:intergenic |
TGAAATCTTGCAAAATCTCC+TGG | 0.440152 | 2:+37698826 | None:intergenic |
AACCCTACAACACCAGGAAC+AGG | 0.450399 | 2:-37700620 | MsG0280008751.01.T01:CDS |
TCTATATTGTTTCAGGTCAT+GGG | 0.468762 | 2:-37699291 | MsG0280008751.01.T01:intron |
CTTGGTGGGGTCATAGTAGT+AGG | 0.472356 | 2:+37699097 | None:intergenic |
CTTCTAGCTCCCATTTCTTG+AGG | 0.477633 | 2:+37701642 | None:intergenic |
GGTGGTGTCATACTGCTTGG+TGG | 0.479946 | 2:+37699082 | None:intergenic |
ACACCAGGAACAGGATCATC+TGG | 0.485638 | 2:-37699800 | MsG0280008751.01.T01:intron |
GGTGTTGTAGGGTTCACAAT+AGG | 0.490997 | 2:+37700629 | None:intergenic |
GATGATCCTCCATCAGCATC+AGG | 0.496560 | 2:+37699046 | None:intergenic |
ACAGGATCATCTGGTGGTGG+TGG | 0.506368 | 2:-37699791 | MsG0280008751.01.T01:CDS |
GTAGCTTTGGATTATGCTTG+TGG | 0.506964 | 2:-37699716 | MsG0280008751.01.T01:CDS |
GACTGTGTGAATTCCAATCA+AGG | 0.510660 | 2:+37698851 | None:intergenic |
CTAGGTGGAGTCATAGTAGT+TGG | 0.526635 | 2:+37699121 | None:intergenic |
CTTGGTGGTGTCATACTGCT+TGG | 0.530201 | 2:+37699079 | None:intergenic |
TCAGTCTATGGTTCACCACC+AGG | 0.530618 | 2:-37699022 | MsG0280008751.01.T01:CDS |
AATAAAATCACACTGAACAG+AGG | 0.539930 | 2:+37701586 | None:intergenic |
GCATCAGGCATTGTCATGCT+TGG | 0.540422 | 2:+37699061 | None:intergenic |
GCACATGAAGTGTAGCATAG+AGG | 0.541615 | 2:+37698939 | None:intergenic |
AAGAAATGGGAGCTAGAAGT+TGG | 0.544857 | 2:-37701638 | MsG0280008751.01.T01:exon |
GTACTTGTATCAGGTGGTTG+AGG | 0.550652 | 2:+37700563 | None:intergenic |
TCAGGCATTGTCATGCTTGG+TGG | 0.555903 | 2:+37699064 | None:intergenic |
GCTATTGATTGAATATGGAA+TGG | 0.558429 | 2:-37698566 | MsG0280008751.01.T01:three_prime_UTR |
CATTGACATGTGTCAGACAC+TGG | 0.559610 | 2:-37698892 | MsG0280008751.01.T01:three_prime_UTR |
ACATTGCTCATAAACTTGAA+AGG | 0.561393 | 2:-37701694 | MsG0280008751.01.T01:five_prime_UTR |
TGTAGTGAGTAGTAGCAGAA+TGG | 0.563778 | 2:+37698964 | None:intergenic |
GTGGAGTCATAGTAGTTGGT+GGG | 0.565923 | 2:+37699125 | None:intergenic |
CCTACAAGTTGTGTATTTGG+AGG | 0.565962 | 2:-37699581 | MsG0280008751.01.T01:CDS |
AATACACAACTTGTAGGTGC+AGG | 0.573202 | 2:+37699587 | None:intergenic |
GGTGGAGTCATAGTAGTTGG+TGG | 0.575064 | 2:+37699124 | None:intergenic |
TGTCCAGTACTTGTATCAGG+TGG | 0.578521 | 2:+37700557 | None:intergenic |
ATAAAATCACACTGAACAGA+GGG | 0.593843 | 2:+37701587 | None:intergenic |
TAATACTATTGATGAAAACA+TGG | 0.598528 | 2:-37698608 | MsG0280008751.01.T01:three_prime_UTR |
GTTGGTGGGCTTACAAATGT+TGG | 0.600377 | 2:+37699139 | None:intergenic |
GGGGTCATAGTAGTAGGACT+AGG | 0.609330 | 2:+37699103 | None:intergenic |
ATGACAATGCCTGATGCTGA+TGG | 0.613075 | 2:-37699055 | MsG0280008751.01.T01:CDS |
AAGTTGATGTAGCTATATTG+GGG | 0.613710 | 2:+37698993 | None:intergenic |
ACTTCTCATCCTCCAAAACA+AGG | 0.615141 | 2:-37699261 | MsG0280008751.01.T01:intron |
GGTGGGCTTACAAATGTTGG+TGG | 0.618577 | 2:+37699142 | None:intergenic |
GGAACAGGATCATCTGGTGG+TGG | 0.620332 | 2:-37699794 | MsG0280008751.01.T01:CDS |
ATTGTGAACCCTACAACACC+AGG | 0.620914 | 2:-37700626 | MsG0280008751.01.T01:CDS |
CCTACAACACCAGGAACAGG+AGG | 0.624591 | 2:-37700617 | MsG0280008751.01.T01:CDS |
TAAATGGATACATTGATGCA+AGG | 0.637168 | 2:+37698731 | None:intergenic |
TGGTGTCATACTGCTTGGTG+GGG | 0.639890 | 2:+37699084 | None:intergenic |
ATATTGGGGCTTCCTCCTGG+TGG | 0.641948 | 2:+37699007 | None:intergenic |
GTCATAGTAGTAGGACTAGG+TGG | 0.650747 | 2:+37699106 | None:intergenic |
TGTGAATTCCAATCAAGGGT+CGG | 0.656464 | 2:+37698856 | None:intergenic |
ACTGTGTGAATTCCAATCAA+GGG | 0.659940 | 2:+37698852 | None:intergenic |
TGTTCACAACTTCAACAAGG+TGG | 0.679957 | 2:-37699680 | MsG0280008751.01.T01:CDS |
ACAATGCCTGATGCTGATGG+AGG | 0.696819 | 2:-37699052 | MsG0280008751.01.T01:CDS |
CCAGGAACAGGATCATCTGG+TGG | 0.699045 | 2:-37699797 | MsG0280008751.01.T01:intron |
GATTGTTCACAACTTCAACA+AGG | 0.703651 | 2:-37699683 | MsG0280008751.01.T01:CDS |
GTCTATGGTTCACCACCAGG+AGG | 0.724042 | 2:-37699019 | MsG0280008751.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTTATGGATTAATTT+TGG | + | Chr2:37699180-37699199 | None:intergenic | 10.0% |
!! | GATAACTAAATATTATTTCA+TGG | + | Chr2:37701750-37701769 | None:intergenic | 15.0% |
!!! | AAAAATTAAGTTGTATGTAT+TGG | - | Chr2:37698960-37698979 | MsG0280008751.01.T01:CDS | 15.0% |
!!! | ATATCTTATTTTTGTTTTAC+AGG | - | Chr2:37699565-37699584 | MsG0280008751.01.T01:CDS | 15.0% |
!! | AACTTATTCATTATTCAATC+AGG | - | Chr2:37699504-37699523 | MsG0280008751.01.T01:intron | 20.0% |
!! | AGATTATCTATTTCAGATAA+AGG | - | Chr2:37701646-37701665 | MsG0280008751.01.T01:exon | 20.0% |
!! | ATCATGATGAATTGATATTA+AGG | + | Chr2:37700786-37700805 | None:intergenic | 20.0% |
!! | GATTATCTATTTCAGATAAA+GGG | - | Chr2:37701647-37701666 | MsG0280008751.01.T01:exon | 20.0% |
!! | TAATACTATTGATGAAAACA+TGG | - | Chr2:37701678-37701697 | MsG0280008751.01.T01:five_prime_UTR | 20.0% |
!!! | AGTTTTATGCAATACTAATA+AGG | + | Chr2:37701081-37701100 | None:intergenic | 20.0% |
!!! | GTTATTTTCTATATTGTTTC+AGG | - | Chr2:37700988-37701007 | MsG0280008751.01.T01:intron | 20.0% |
!!! | TATTTTTGTTTTACAGGTTT+AGG | - | Chr2:37699571-37699590 | MsG0280008751.01.T01:CDS | 20.0% |
! | AACTTGATTTAGATCATGTT+TGG | + | Chr2:37700960-37700979 | None:intergenic | 25.0% |
! | AAGGACAATACATATATTAG+AGG | + | Chr2:37701108-37701127 | None:intergenic | 25.0% |
! | AATTCATCATGATCATTGAA+CGG | - | Chr2:37700793-37700812 | MsG0280008751.01.T01:intron | 25.0% |
! | AGAAATTAAACCTCAAGAAA+TGG | - | Chr2:37698634-37698653 | MsG0280008751.01.T01:three_prime_UTR | 25.0% |
! | AGATATTCATACAACATTGA+AGG | - | Chr2:37700760-37700779 | MsG0280008751.01.T01:intron | 25.0% |
! | ATAAATCTGCTAATGCTAAA+TGG | + | Chr2:37701574-37701593 | None:intergenic | 25.0% |
! | ATTCACTGAATAAGTGAATT+AGG | - | Chr2:37699474-37699493 | MsG0280008751.01.T01:intron | 25.0% |
! | GAAATTAAACCTCAAGAAAT+GGG | - | Chr2:37698635-37698654 | MsG0280008751.01.T01:three_prime_UTR | 25.0% |
! | TATACTTCTCTACGTTTAAT+AGG | - | Chr2:37698752-37698771 | MsG0280008751.01.T01:three_prime_UTR | 25.0% |
! | TGAATCTTCTCTTAATCTTA+TGG | + | Chr2:37699601-37699620 | None:intergenic | 25.0% |
! | TGTTGTATGAATATCTTACT+TGG | + | Chr2:37700756-37700775 | None:intergenic | 25.0% |
! | TTTAGCATTAGCAGATTTAT+AGG | - | Chr2:37701574-37701593 | MsG0280008751.01.T01:intron | 25.0% |
!! | CATGATCTTTCAAAGTATTT+GGG | + | Chr2:37700644-37700663 | None:intergenic | 25.0% |
!! | GTAGAGAAGTATATATTGAA+AGG | + | Chr2:37698745-37698764 | None:intergenic | 25.0% |
!!! | AGCATGATCTTTAAAGTATT+TGG | + | Chr2:37700117-37700136 | None:intergenic | 25.0% |
!!! | GCATGATCTTTAAAGTATTT+GGG | + | Chr2:37700116-37700135 | None:intergenic | 25.0% |
!!! | TATAAATTCTCACCTTGTTT+TGG | + | Chr2:37701040-37701059 | None:intergenic | 25.0% |
!!! | TGGTACATGACTTATTTTTA+TGG | + | Chr2:37699191-37699210 | None:intergenic | 25.0% |
AATAAAATCACACTGAACAG+AGG | + | Chr2:37698703-37698722 | None:intergenic | 30.0% | |
AATAGTTGTGTTGTGTGATA+AGG | - | Chr2:37698802-37698821 | MsG0280008751.01.T01:three_prime_UTR | 30.0% | |
ACAATCCAAAATGACAACAT+TGG | - | Chr2:37699238-37699257 | MsG0280008751.01.T01:intron | 30.0% | |
ACATTGCTCATAAACTTGAA+AGG | - | Chr2:37698592-37698611 | MsG0280008751.01.T01:three_prime_UTR | 30.0% | |
AGAAAAAACAAGCATGTACA+TGG | + | Chr2:37699211-37699230 | None:intergenic | 30.0% | |
ATAAAATCACACTGAACAGA+GGG | + | Chr2:37698702-37698721 | None:intergenic | 30.0% | |
CATCATGATCATTAACGTAT+TGG | - | Chr2:37700264-37700283 | MsG0280008751.01.T01:intron | 30.0% | |
CTTAGTTGCAAGAATTCATA+TGG | + | Chr2:37701514-37701533 | None:intergenic | 30.0% | |
GACATAGCAAAAATAAGACA+AGG | + | Chr2:37698676-37698695 | None:intergenic | 30.0% | |
GATCATGATGAATGCTATTA+AGG | + | Chr2:37700254-37700273 | None:intergenic | 30.0% | |
GTTTATGAGCAATGTTTAAG+AGG | + | Chr2:37698587-37698606 | None:intergenic | 30.0% | |
TAAATGGATACATTGATGCA+AGG | + | Chr2:37701558-37701577 | None:intergenic | 30.0% | |
TAAGGCGAATATGATATAAG+TGG | + | Chr2:37701063-37701082 | None:intergenic | 30.0% | |
! | CTATGATACAGATTTTATCG+TGG | + | Chr2:37699441-37699460 | None:intergenic | 30.0% |
! | GCATAGCTATTGATTGAATA+TGG | - | Chr2:37701715-37701734 | MsG0280008751.01.T01:five_prime_UTR | 30.0% |
! | GCATGATCTTTCAAAGTATT+TGG | + | Chr2:37700645-37700664 | None:intergenic | 30.0% |
! | GCTATTGATTGAATATGGAA+TGG | - | Chr2:37701720-37701739 | MsG0280008751.01.T01:five_prime_UTR | 30.0% |
! | TCTATATTGTTTCAGGTCAT+GGG | - | Chr2:37700995-37701014 | MsG0280008751.01.T01:intron | 30.0% |
! | TTCTATATTGTTTCAGGTCA+TGG | - | Chr2:37700994-37701013 | MsG0280008751.01.T01:intron | 30.0% |
!! | AAGTTGATGTAGCTATATTG+GGG | + | Chr2:37701296-37701315 | None:intergenic | 30.0% |
!! | AGAAGTTGATGTAGCTATAT+TGG | + | Chr2:37701298-37701317 | None:intergenic | 30.0% |
!! | GAAGTTGATGTAGCTATATT+GGG | + | Chr2:37701297-37701316 | None:intergenic | 30.0% |
!! | TGAATCCAATGTTGTCATTT+TGG | + | Chr2:37699246-37699265 | None:intergenic | 30.0% |
AAGTCGAGGAATATCTTACT+TGG | + | Chr2:37700226-37700245 | None:intergenic | 35.0% | |
ACATGTGTTAATGTTGTGTC+AGG | + | Chr2:37700853-37700872 | None:intergenic | 35.0% | |
ACTGTGTGAATTCCAATCAA+GGG | + | Chr2:37701437-37701456 | None:intergenic | 35.0% | |
ATCTGCAGAGACTACTTTAA+AGG | - | Chr2:37700022-37700041 | MsG0280008751.01.T01:intron | 35.0% | |
CCTACAAATACACAACTTGT+AGG | + | Chr2:37700179-37700198 | None:intergenic | 35.0% | |
CCTACAAGTTGTGTATTTGT+AGG | - | Chr2:37700176-37700195 | MsG0280008751.01.T01:intron | 35.0% | |
GATTGTTCACAACTTCAACA+AGG | - | Chr2:37700603-37700622 | MsG0280008751.01.T01:CDS | 35.0% | |
GTTGGGTTTATAGTAGGATA+AGG | + | Chr2:37699699-37699718 | None:intergenic | 35.0% | |
TAATATTACGACCGAGATCA+TGG | + | Chr2:37699327-37699346 | None:intergenic | 35.0% | |
TGAAATCTTGCAAAATCTCC+TGG | + | Chr2:37701463-37701482 | None:intergenic | 35.0% | |
TGATCTCGGTCGTAATATTA+AGG | - | Chr2:37699327-37699346 | MsG0280008751.01.T01:intron | 35.0% | |
TGTTGTGTGATAAGGAGTTA+AGG | - | Chr2:37698810-37698829 | MsG0280008751.01.T01:three_prime_UTR | 35.0% | |
TTGAAACATGTAAAGCTGCA+GGG | - | Chr2:37698899-37698918 | MsG0280008751.01.T01:three_prime_UTR | 35.0% | |
TTGGATTATGCTTGTGGATA+TGG | - | Chr2:37700576-37700595 | MsG0280008751.01.T01:CDS | 35.0% | |
TTGTAACACAACTGTGATTG+AGG | - | Chr2:37699367-37699386 | MsG0280008751.01.T01:intron | 35.0% | |
TTGTTGGAGTTGTTGTAGTT+GGG | + | Chr2:37699908-37699927 | None:intergenic | 35.0% | |
! | AGACTACTTTAAAGGTAGCT+TGG | - | Chr2:37700030-37700049 | MsG0280008751.01.T01:intron | 35.0% |
! | CTTGGATTATGCTTTGGATA+TGG | - | Chr2:37700048-37700067 | MsG0280008751.01.T01:intron | 35.0% |
! | GACTACTTTAAAGGTAGCTT+TGG | - | Chr2:37700031-37700050 | MsG0280008751.01.T01:intron | 35.0% |
! | GATACAGATTTTATCGTGGT+GGG | + | Chr2:37699437-37699456 | None:intergenic | 35.0% |
! | GGTTTGAGTATGGATTTGTT+GGG | + | Chr2:37699788-37699807 | None:intergenic | 35.0% |
! | TGATACAGATTTTATCGTGG+TGG | + | Chr2:37699438-37699457 | None:intergenic | 35.0% |
!! | ATGGATTTGTTGAACTTGGT+GGG | + | Chr2:37699869-37699888 | None:intergenic | 35.0% |
!! | GAGTATGGATTTGTTGAACT+TGG | + | Chr2:37699873-37699892 | None:intergenic | 35.0% |
!! | TATGGATTTGTTGAACTTGG+TGG | + | Chr2:37699870-37699889 | None:intergenic | 35.0% |
!!! | AAATTCTCACCTTGTTTTGG+AGG | + | Chr2:37701037-37701056 | None:intergenic | 35.0% |
AAGAAATGGGAGCTAGAAGT+TGG | - | Chr2:37698648-37698667 | MsG0280008751.01.T01:three_prime_UTR | 40.0% | |
AATACACAACTTGTAGGTGC+AGG | + | Chr2:37700173-37700192 | None:intergenic | 40.0% | |
ACTTCTCATCCTCCAAAACA+AGG | - | Chr2:37701025-37701044 | MsG0280008751.01.T01:intron | 40.0% | |
AGCTGCAGAGACTACTTTAA+AGG | - | Chr2:37700548-37700567 | MsG0280008751.01.T01:intron | 40.0% | |
AGGTAGCTTGGATTATGCTT+TGG | - | Chr2:37700042-37700061 | MsG0280008751.01.T01:intron | 40.0% | |
ATAGGACACATCCATGATCT+CGG | - | Chr2:37699313-37699332 | MsG0280008751.01.T01:intron | 40.0% | |
ATATTACACCGACCCTTGAT+TGG | - | Chr2:37701422-37701441 | MsG0280008751.01.T01:intron | 40.0% | |
ATGGATTTGTAGAAGCTGGT+GGG | + | Chr2:37699839-37699858 | None:intergenic | 40.0% | |
CCTACAAGTTGTGTATTTGG+AGG | - | Chr2:37700705-37700724 | MsG0280008751.01.T01:intron | 40.0% | |
CCTCCAAATACACAACTTGT+AGG | + | Chr2:37700708-37700727 | None:intergenic | 40.0% | |
CGCGGTTAAATTCAGTTGAA+CGG | + | Chr2:37699393-37699412 | None:intergenic | 40.0% | |
CTATTAAGGACTTCAAGTCG+AGG | + | Chr2:37700240-37700259 | None:intergenic | 40.0% | |
CTTGTTGGAGTTGTTGTAGT+TGG | + | Chr2:37699909-37699928 | None:intergenic | 40.0% | |
GACTGTGTGAATTCCAATCA+AGG | + | Chr2:37701438-37701457 | None:intergenic | 40.0% | |
GAGTATGGATTTGTAGAAGC+TGG | + | Chr2:37699843-37699862 | None:intergenic | 40.0% | |
GCACCTACAAGTTGTGTATT+TGG | - | Chr2:37700173-37700192 | MsG0280008751.01.T01:intron | 40.0% | |
GGAGATGTTGGGTTTATAGT+AGG | + | Chr2:37699705-37699724 | None:intergenic | 40.0% | |
GGGTTTGAGTATGGATTTGT+TGG | + | Chr2:37699789-37699808 | None:intergenic | 40.0% | |
GTTGAAACATGTAAAGCTGC+AGG | - | Chr2:37698898-37698917 | MsG0280008751.01.T01:three_prime_UTR | 40.0% | |
GTTTGAATAGGGACTTGTAG+AGG | + | Chr2:37699817-37699836 | None:intergenic | 40.0% | |
GTTTGTCCAGTACTTGTATC+AGG | + | Chr2:37699735-37699754 | None:intergenic | 40.0% | |
TATGGATTTGTAGAAGCTGG+TGG | + | Chr2:37699840-37699859 | None:intergenic | 40.0% | |
TGTAGTGAGTAGTAGCAGAA+TGG | + | Chr2:37701325-37701344 | None:intergenic | 40.0% | |
TGTGAATTCCAATCAAGGGT+CGG | + | Chr2:37701433-37701452 | None:intergenic | 40.0% | |
TGTTCACAACTTCAACAAGG+TGG | - | Chr2:37700606-37700625 | MsG0280008751.01.T01:CDS | 40.0% | |
! | TTGTTGTAGTTGGGCTTGTT+GGG | + | Chr2:37699899-37699918 | None:intergenic | 40.0% |
!! | GTAGCTTTGGATTATGCTTG+TGG | - | Chr2:37700570-37700589 | MsG0280008751.01.T01:CDS | 40.0% |
!!! | TTGTTTTGGAGGATGAGAAG+TGG | + | Chr2:37701026-37701045 | None:intergenic | 40.0% |
ATGACAATGCCTGATGCTGA+TGG | - | Chr2:37701231-37701250 | MsG0280008751.01.T01:intron | 45.0% | |
ATGGATGTGTCCTATGACTG+CGG | + | Chr2:37699308-37699327 | None:intergenic | 45.0% | |
ATTGTGAACCCTACAACACC+AGG | - | Chr2:37699660-37699679 | MsG0280008751.01.T01:CDS | 45.0% | |
CAACCACCTGATACAAGTAC+TGG | - | Chr2:37699726-37699745 | MsG0280008751.01.T01:CDS | 45.0% | |
CATTGACATGTGTCAGACAC+TGG | - | Chr2:37701394-37701413 | MsG0280008751.01.T01:intron | 45.0% | |
CTAGGTGGAGTCATAGTAGT+TGG | + | Chr2:37701168-37701187 | None:intergenic | 45.0% | |
GAATAGGGACTTGTAGAGGT+TGG | + | Chr2:37699813-37699832 | None:intergenic | 45.0% | |
GATCATTGAACGGTAGTGTC+TGG | - | Chr2:37700803-37700822 | MsG0280008751.01.T01:intron | 45.0% | |
GCACATGAAGTGTAGCATAG+AGG | + | Chr2:37701350-37701369 | None:intergenic | 45.0% | |
GGAGGATCATCATCAGTCTA+TGG | - | Chr2:37701252-37701271 | MsG0280008751.01.T01:intron | 45.0% | |
GGTCAGACACTGATACATGT+CGG | + | Chr2:37700832-37700851 | None:intergenic | 45.0% | |
GTACTTGTATCAGGTGGTTG+AGG | + | Chr2:37699726-37699745 | None:intergenic | 45.0% | |
GTCATAGTAGTAGGACTAGG+TGG | + | Chr2:37701183-37701202 | None:intergenic | 45.0% | |
GTGGAGTCATAGTAGTTGGT+GGG | + | Chr2:37701164-37701183 | None:intergenic | 45.0% | |
GTGTTGTAGGAGTCACAGTT+GGG | + | Chr2:37700470-37700489 | None:intergenic | 45.0% | |
GTGTTGTGGGAGTCACATTT+GGG | + | Chr2:37699932-37699951 | None:intergenic | 45.0% | |
GTTGTTGTAGTTGGGCTTGT+TGG | + | Chr2:37699900-37699919 | None:intergenic | 45.0% | |
TAAGGATTTCCTCCTGTTCC+TGG | + | Chr2:37699681-37699700 | None:intergenic | 45.0% | |
TGGAATTCACACAGTCTTCC+AGG | - | Chr2:37701442-37701461 | MsG0280008751.01.T01:intron | 45.0% | |
TGGACTCATGCTGTAATGCA+AGG | + | Chr2:37701127-37701146 | None:intergenic | 45.0% | |
TGGTGGGATCTTCGATCTTA+TGG | + | Chr2:37699421-37699440 | None:intergenic | 45.0% | |
TGTCCAGTACTTGTATCAGG+TGG | + | Chr2:37699732-37699751 | None:intergenic | 45.0% | |
TTCGATCTTATGGCAGATCG+CGG | + | Chr2:37699411-37699430 | None:intergenic | 45.0% | |
! | GGTGTTGTAGGGTTCACAAT+AGG | + | Chr2:37699660-37699679 | None:intergenic | 45.0% |
! | GTTTTCCATTCCGCAGTCAT+AGG | - | Chr2:37699295-37699314 | MsG0280008751.01.T01:intron | 45.0% |
!! | AGAAGCTGGTGGGTTTGAAT+AGG | + | Chr2:37699829-37699848 | None:intergenic | 45.0% |
!! | CTTCTAGCTCCCATTTCTTG+AGG | + | Chr2:37698647-37698666 | None:intergenic | 45.0% |
!! | GAACTTGGTGGGTTTGAGTA+TGG | + | Chr2:37699858-37699877 | None:intergenic | 45.0% |
!! | GAAGCTGGTGGGTTTGAATA+GGG | + | Chr2:37699828-37699847 | None:intergenic | 45.0% |
!! | GTTGGTGGGCTTACAAATGT+TGG | + | Chr2:37701150-37701169 | None:intergenic | 45.0% |
!!! | TTATTTATTTTTAAATACTT+TGG | - | Chr2:37698718-37698737 | MsG0280008751.01.T01:three_prime_UTR | 5.0% |
AACCCTACAACACCAGGAAC+AGG | - | Chr2:37699666-37699685 | MsG0280008751.01.T01:CDS | 50.0% | |
AATGTGACTCCCACAACACC+AGG | - | Chr2:37699933-37699952 | MsG0280008751.01.T01:intron | 50.0% | |
ACAATGCCTGATGCTGATGG+AGG | - | Chr2:37701234-37701253 | MsG0280008751.01.T01:intron | 50.0% | |
ACACCAGGAACAGGATCATC+TGG | - | Chr2:37699948-37699967 | MsG0280008751.01.T01:intron | 50.0% | |
ACTCCTACAACACCAGGAAC+AGG | - | Chr2:37700477-37700496 | MsG0280008751.01.T01:intron | 50.0% | |
ACTGTGACTCCTACAACACC+AGG | - | Chr2:37700471-37700490 | MsG0280008751.01.T01:intron | 50.0% | |
CAGGTGGTTGAGGAGATGTT+GGG | + | Chr2:37699716-37699735 | None:intergenic | 50.0% | |
CTTGGTGGGGTCATAGTAGT+AGG | + | Chr2:37701192-37701211 | None:intergenic | 50.0% | |
GATGATCCTCCATCAGCATC+AGG | + | Chr2:37701243-37701262 | None:intergenic | 50.0% | |
GGAGTCACATTTGGGCTTGT+TGG | + | Chr2:37699924-37699943 | None:intergenic | 50.0% | |
GGGGTCATAGTAGTAGGACT+AGG | + | Chr2:37701186-37701205 | None:intergenic | 50.0% | |
GGTGGAGTCATAGTAGTTGG+TGG | + | Chr2:37701165-37701184 | None:intergenic | 50.0% | |
TAGGGACTTGTAGAGGTTGG+TGG | + | Chr2:37699810-37699829 | None:intergenic | 50.0% | |
TCAGGTGGTTGAGGAGATGT+TGG | + | Chr2:37699717-37699736 | None:intergenic | 50.0% | |
TCAGTCTATGGTTCACCACC+AGG | - | Chr2:37701264-37701283 | MsG0280008751.01.T01:intron | 50.0% | |
TGTGTCCTATGACTGCGGAA+TGG | + | Chr2:37699303-37699322 | None:intergenic | 50.0% | |
! | AGGGACTTGTAGAGGTTGGT+GGG | + | Chr2:37699809-37699828 | None:intergenic | 50.0% |
! | GCATCAGGCATTGTCATGCT+TGG | + | Chr2:37701228-37701247 | None:intergenic | 50.0% |
! | GGTGGGCTTACAAATGTTGG+TGG | + | Chr2:37701147-37701166 | None:intergenic | 50.0% |
! | GGTGTTGTAGGAGTCACAGT+TGG | + | Chr2:37700471-37700490 | None:intergenic | 50.0% |
! | GGTGTTGTGGGAGTCACATT+TGG | + | Chr2:37699933-37699952 | None:intergenic | 50.0% |
! | TCAGGCATTGTCATGCTTGG+TGG | + | Chr2:37701225-37701244 | None:intergenic | 50.0% |
! | TGATCCTGTTCCTGGTGTTG+TGG | + | Chr2:37699946-37699965 | None:intergenic | 50.0% |
!! | CTCCTGTTCCTGGTGTTGTA+GGG | + | Chr2:37699671-37699690 | None:intergenic | 50.0% |
!! | CTTGGTGGTGTCATACTGCT+TGG | + | Chr2:37701210-37701229 | None:intergenic | 50.0% |
!! | GAGGTTGGTGGGTTTGAGTA+TGG | + | Chr2:37699798-37699817 | None:intergenic | 50.0% |
!! | GATCCTGTTCCTGGTGTTGT+AGG | + | Chr2:37699945-37699964 | None:intergenic | 50.0% |
!! | GATCCTGTTCCTGGTGTTGT+GGG | + | Chr2:37699945-37699964 | None:intergenic | 50.0% |
!! | GGGCTTGTTGGGTTTGAGTA+TGG | + | Chr2:37699888-37699907 | None:intergenic | 50.0% |
!! | GTGGTGTCATACTGCTTGGT+GGG | + | Chr2:37701206-37701225 | None:intergenic | 50.0% |
!! | TGGTGTCATACTGCTTGGTG+GGG | + | Chr2:37701205-37701224 | None:intergenic | 50.0% |
ACTCCCACAACACCAGGAAC+AGG | - | Chr2:37699939-37699958 | MsG0280008751.01.T01:intron | 55.0% | |
ATATTGGGGCTTCCTCCTGG+TGG | + | Chr2:37701282-37701301 | None:intergenic | 55.0% | |
CCACCAGATGATCCTGTTCC+TGG | + | Chr2:37699954-37699973 | None:intergenic | 55.0% | |
CCAGGAACAGGATCATCTGG+TGG | - | Chr2:37699951-37699970 | MsG0280008751.01.T01:intron | 55.0% | |
CCTACAACACCAGGAACAGG+AGG | - | Chr2:37699669-37699688 | MsG0280008751.01.T01:CDS | 55.0% | |
GCTATATTGGGGCTTCCTCC+TGG | + | Chr2:37701285-37701304 | None:intergenic | 55.0% | |
GGAACAGGATCATCTGGTGG+TGG | - | Chr2:37699954-37699973 | MsG0280008751.01.T01:intron | 55.0% | |
GGAGTCACAGTTGGGCTTGT+TGG | + | Chr2:37700462-37700481 | None:intergenic | 55.0% | |
GTCTATGGTTCACCACCAGG+AGG | - | Chr2:37701267-37701286 | MsG0280008751.01.T01:intron | 55.0% | |
!! | ACAGGATCATCTGGTGGTGG+TGG | - | Chr2:37699957-37699976 | MsG0280008751.01.T01:intron | 55.0% |
!! | CCTCCTGTTCCTGGTGTTGT+AGG | + | Chr2:37699672-37699691 | None:intergenic | 55.0% |
!! | GGCTTGTTGTGCCTGTGTCT+GGG | + | Chr2:37699767-37699786 | None:intergenic | 55.0% |
!! | GGTGGTGTCATACTGCTTGG+TGG | + | Chr2:37701207-37701226 | None:intergenic | 55.0% |
GTGGTGTGTGTGGTGGTCAG+TGG | - | Chr2:37699982-37700001 | MsG0280008751.01.T01:intron | 60.0% | |
GTTGTGCCTGTGTCTGGGCT+TGG | + | Chr2:37699762-37699781 | None:intergenic | 60.0% | |
! | TGCCTGTGTCTGGGCTTGGT+GGG | + | Chr2:37699758-37699777 | None:intergenic | 60.0% |
!! | GGATCATCTGGTGGTGGTGG+TGG | - | Chr2:37699960-37699979 | MsG0280008751.01.T01:intron | 60.0% |
!! | GGGCTTGTTGTGCCTGTGTC+TGG | + | Chr2:37699768-37699787 | None:intergenic | 60.0% |
!! | TCATCTGGTGGTGGTGGTGG+TGG | - | Chr2:37699963-37699982 | MsG0280008751.01.T01:intron | 60.0% |
ACCCCACCAAGCCCAGACAC+AGG | - | Chr2:37699753-37699772 | MsG0280008751.01.T01:CDS | 65.0% | |
GTGCCTGTGTCTGGGCTTGG+TGG | + | Chr2:37699759-37699778 | None:intergenic | 65.0% | |
!! | GCCTGTGTCTGGGCTTGGTG+GGG | + | Chr2:37699757-37699776 | None:intergenic | 65.0% |
!! | GGTGGTGGTGGTGGTGTGTG+TGG | - | Chr2:37699972-37699991 | MsG0280008751.01.T01:intron | 65.0% |
!! | GGTGGTGGTGGTGTGTGTGG+TGG | - | Chr2:37699975-37699994 | MsG0280008751.01.T01:intron | 65.0% |
!! | GTGGTGGTGGTGGTGGTCAG+TGG | - | Chr2:37700508-37700527 | MsG0280008751.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 37698539 | 37701769 | 37698539 | ID=MsG0280008751.01;Name=MsG0280008751.01 |
Chr2 | mRNA | 37698539 | 37701769 | 37698539 | ID=MsG0280008751.01.T01;Parent=MsG0280008751.01;Name=MsG0280008751.01.T01;_AED=0.23;_eAED=0.23;_QI=114|0.75|0.6|1|0.5|0.6|5|386|253 |
Chr2 | exon | 37698539 | 37699171 | 37698539 | ID=MsG0280008751.01.T01:exon:9736;Parent=MsG0280008751.01.T01 |
Chr2 | exon | 37699262 | 37699298 | 37699262 | ID=MsG0280008751.01.T01:exon:9735;Parent=MsG0280008751.01.T01 |
Chr2 | exon | 37699552 | 37699815 | 37699552 | ID=MsG0280008751.01.T01:exon:9734;Parent=MsG0280008751.01.T01 |
Chr2 | exon | 37700567 | 37700721 | 37700567 | ID=MsG0280008751.01.T01:exon:9733;Parent=MsG0280008751.01.T01 |
Chr2 | exon | 37701597 | 37701769 | 37701597 | ID=MsG0280008751.01.T01:exon:9732;Parent=MsG0280008751.01.T01 |
Chr2 | five_prime_UTR | 37701656 | 37701769 | 37701656 | ID=MsG0280008751.01.T01:five_prime_utr;Parent=MsG0280008751.01.T01 |
Chr2 | CDS | 37701597 | 37701655 | 37701597 | ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01 |
Chr2 | CDS | 37700567 | 37700721 | 37700567 | ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01 |
Chr2 | CDS | 37699552 | 37699815 | 37699552 | ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01 |
Chr2 | CDS | 37699262 | 37699298 | 37699262 | ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01 |
Chr2 | CDS | 37698925 | 37699171 | 37698925 | ID=MsG0280008751.01.T01:cds;Parent=MsG0280008751.01.T01 |
Chr2 | three_prime_UTR | 37698539 | 37698924 | 37698539 | ID=MsG0280008751.01.T01:three_prime_utr;Parent=MsG0280008751.01.T01 |
Gene Sequence |
Protein sequence |