Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010484.01.T01 | XP_013464916.1 | 98.592 | 426 | 6 | 0 | 1 | 426 | 1 | 426 | 0 | 873 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010484.01.T01 | D3U717 | 74 | 450 | 70 | 6 | 1 | 424 | 1 | 429 | 0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010484.01.T01 | A0A072VBH8 | 98.592 | 426 | 6 | 0 | 1 | 426 | 1 | 426 | 0.0 | 873 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005248.01 | MsG0280010484.01 | 0.836928 | 7.018687e-57 | 8.976486e-54 |
| MsG0280007193.01 | MsG0280010484.01 | 0.803035 | 4.224640e-49 | 2.101060e-46 |
| MsG0280009981.01 | MsG0280010484.01 | 0.806424 | 8.281992e-50 | 4.493578e-47 |
| MsG0280010160.01 | MsG0280010484.01 | 0.810774 | 9.751038e-51 | 5.930930e-48 |
| MsG0280010484.01 | MsG0380014258.01 | 0.805369 | 1.380375e-49 | 7.289875e-47 |
| MsG0280010484.01 | MsG0380015056.01 | 0.856946 | 2.280830e-62 | 5.535928e-59 |
| MsG0280010484.01 | MsG0380015849.01 | 0.834339 | 3.174470e-56 | 3.756156e-53 |
| MsG0280010484.01 | MsG0480018525.01 | 0.808882 | 2.488852e-50 | 1.439677e-47 |
| MsG0280010484.01 | MsG0480023348.01 | 0.827235 | 1.749653e-54 | 1.679201e-51 |
| MsG0280010484.01 | MsG0480023453.01 | 0.865849 | 4.380408e-65 | 1.446078e-61 |
| MsG0280010484.01 | MsG0480024016.01 | 0.830755 | 2.455596e-55 | 2.611449e-52 |
| MsG0280010484.01 | MsG0580025827.01 | -0.802677 | 5.007449e-49 | 2.467853e-46 |
| MsG0280010484.01 | MsG0580026159.01 | 0.821890 | 3.173889e-53 | 2.615375e-50 |
| MsG0280010484.01 | MsG0680032473.01 | 0.876582 | 1.245170e-68 | 6.068280e-65 |
| MsG0280010484.01 | MsG0880044696.01 | 0.807438 | 5.054975e-50 | 2.815508e-47 |
| MsG0280010484.01 | MsG0880046976.01 | 0.813194 | 2.896383e-51 | 1.878822e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010484.01.T01 | MTR_2g084875 | 98.592 | 426 | 6 | 0 | 1 | 426 | 1 | 426 | 0.0 | 873 |
| MsG0280010484.01.T01 | MTR_4g055310 | 80.751 | 426 | 65 | 6 | 1 | 424 | 1 | 411 | 0.0 | 681 |
| MsG0280010484.01.T01 | MTR_4g132250 | 67.105 | 304 | 98 | 1 | 116 | 419 | 89 | 390 | 4.75e-150 | 431 |
| MsG0280010484.01.T01 | MTR_2g088130 | 65.033 | 306 | 105 | 1 | 116 | 421 | 71 | 374 | 1.41e-148 | 427 |
| MsG0280010484.01.T01 | MTR_4g061070 | 66.013 | 306 | 99 | 2 | 116 | 421 | 73 | 373 | 4.25e-141 | 408 |
| MsG0280010484.01.T01 | MTR_2g088130 | 67.029 | 276 | 89 | 1 | 146 | 421 | 51 | 324 | 3.33e-135 | 391 |
| MsG0280010484.01.T01 | MTR_2g088130 | 64.504 | 262 | 91 | 1 | 116 | 377 | 71 | 330 | 1.57e-123 | 362 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010484.01.T01 | AT1G08250 | 81.250 | 384 | 53 | 5 | 49 | 420 | 26 | 402 | 0.0 | 613 |
| MsG0280010484.01.T01 | AT2G27820 | 82.289 | 367 | 58 | 3 | 58 | 421 | 46 | 408 | 0.0 | 591 |
| MsG0280010484.01.T01 | AT3G44720 | 72.886 | 402 | 88 | 5 | 32 | 424 | 28 | 417 | 0.0 | 574 |
| MsG0280010484.01.T01 | AT5G22630 | 70.602 | 432 | 107 | 4 | 1 | 425 | 1 | 419 | 0.0 | 564 |
| MsG0280010484.01.T01 | AT1G11790 | 63.072 | 306 | 111 | 1 | 116 | 421 | 88 | 391 | 4.14e-145 | 419 |
| MsG0280010484.01.T01 | AT3G07630 | 66.990 | 309 | 95 | 2 | 113 | 421 | 78 | 379 | 1.55e-139 | 404 |
| MsG0280010484.01.T01 | AT3G07630 | 66.990 | 309 | 95 | 2 | 113 | 421 | 78 | 379 | 1.55e-139 | 404 |
| MsG0280010484.01.T01 | AT3G07630 | 66.990 | 309 | 95 | 2 | 113 | 421 | 78 | 379 | 1.55e-139 | 404 |
| MsG0280010484.01.T01 | AT1G11790 | 61.728 | 243 | 91 | 1 | 116 | 358 | 88 | 328 | 6.25e-108 | 322 |
Find 121 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCGTGCTGCCGAGCTTTA+TGG | 0.134872 | 2:-70373634 | MsG0280010484.01.T01:CDS |
| CGATCCGTACGTGGAATTAT+TGG | 0.235123 | 2:+70373538 | None:intergenic |
| CACGTCTTTCTTGAGAGTTT+TGG | 0.267407 | 2:-70373260 | MsG0280010484.01.T01:CDS |
| TCGGAGATTGTTAACGGTTT+TGG | 0.276157 | 2:+70374132 | None:intergenic |
| CGTTTCAAGCCGTCGAGCTT+TGG | 0.306242 | 2:-70373975 | MsG0280010484.01.T01:CDS |
| CAAGGAATTGCTTCGCAGTT+TGG | 0.320220 | 2:+70374015 | None:intergenic |
| ATGAGCTTTGCCAATCGGTT+CGG | 0.347567 | 2:+70374328 | None:intergenic |
| AAACGCGTTGGCTGAAGTTC+AGG | 0.354971 | 2:-70373287 | MsG0280010484.01.T01:CDS |
| TGAGCTTTGCCAATCGGTTC+GGG | 0.367455 | 2:+70374329 | None:intergenic |
| GCATCATCAACGAGCCTAAT+CGG | 0.371921 | 2:+70373388 | None:intergenic |
| ACGAATCGGGTCACGTTACT+CGG | 0.372580 | 2:+70373577 | None:intergenic |
| TACGGTTCAATTTATGAATC+CGG | 0.377562 | 2:-70374357 | MsG0280010484.01.T01:CDS |
| CGGTTCGGACCGAGCCGGTT+TGG | 0.384226 | 2:+70374399 | None:intergenic |
| TTGTTATGTGGTTGAAATTG+AGG | 0.385367 | 2:+70374442 | None:intergenic |
| TACGTGGAATTATTGGTTCT+CGG | 0.399885 | 2:+70373545 | None:intergenic |
| CGCCGACCGTGCCGTTCTCC+CGG | 0.401840 | 2:-70373950 | MsG0280010484.01.T01:CDS |
| TTCATCGGCGCCGGTGTTGA+CGG | 0.402723 | 2:+70374251 | None:intergenic |
| CCAATCGGTTCGGGTTGAAC+CGG | 0.407367 | 2:+70374338 | None:intergenic |
| CTTGAAACGCCACTTCGAAT+TGG | 0.410792 | 2:+70373989 | None:intergenic |
| CAAACCGGCTCGGTCCGAAC+CGG | 0.410873 | 2:-70374398 | MsG0280010484.01.T01:CDS |
| GGTGTTGACGGCGGTGGAAG+TGG | 0.419833 | 2:+70374263 | None:intergenic |
| CGTGCATCGGTGCCGGAGCT+AGG | 0.422738 | 2:+70374109 | None:intergenic |
| AAGCTCGGCAGCACGGGCGC+TGG | 0.431811 | 2:+70373639 | None:intergenic |
| TCCATAAAGCTCGGCAGCAC+GGG | 0.437399 | 2:+70373633 | None:intergenic |
| GCGGCTTCGGAGTATGCTCC+CGG | 0.439700 | 2:+70374054 | None:intergenic |
| GTTTCTGTCAAATGTGCTTA+CGG | 0.450930 | 2:-70374375 | MsG0280010484.01.T01:CDS |
| CTTGAGCCGTGCATCGGTGC+CGG | 0.455252 | 2:+70374102 | None:intergenic |
| GCGAGGAGACAGTGATGGAC+CGG | 0.457534 | 2:+70373841 | None:intergenic |
| AACAATCTCCGACCTAGCTC+CGG | 0.461711 | 2:-70374121 | MsG0280010484.01.T01:CDS |
| TGTTATGTGGTTGAAATTGA+GGG | 0.461933 | 2:+70374443 | None:intergenic |
| AGCACATGAGCTTTGCCAAT+CGG | 0.463772 | 2:+70374323 | None:intergenic |
| AGGGTGTTGGAAGAGGGAGG+TGG | 0.465964 | 2:+70374462 | None:intergenic |
| GGCGCCGGTGTTGACGGCGG+TGG | 0.466117 | 2:+70374257 | None:intergenic |
| ACGTGGAATTATTGGTTCTC+GGG | 0.468317 | 2:+70373546 | None:intergenic |
| CACTGTCTCCTCGCTCTCCC+CGG | 0.469363 | 2:-70373832 | MsG0280010484.01.T01:CDS |
| GAAATTGAGGGTGTTGGAAG+AGG | 0.470220 | 2:+70374455 | None:intergenic |
| CTCGGGCCAACATAACGAAT+CGG | 0.470637 | 2:+70373563 | None:intergenic |
| AGTATGCTCCCGGGACTCCT+TGG | 0.480032 | 2:+70374064 | None:intergenic |
| GTGGTTGAAATTGAGGGTGT+TGG | 0.481711 | 2:+70374449 | None:intergenic |
| GCTAGGTCGGAGATTGTTAA+CGG | 0.485559 | 2:+70374126 | None:intergenic |
| CGTCGCTTACCAAGGAGTCC+CGG | 0.492434 | 2:-70374073 | MsG0280010484.01.T01:CDS |
| AAATTGAGGGTGTTGGAAGA+GGG | 0.492645 | 2:+70374456 | None:intergenic |
| CTCATCGTAACCGTCCGATT+AGG | 0.493486 | 2:-70373402 | MsG0280010484.01.T01:CDS |
| GTTTAACGAAGATTGAATCA+AGG | 0.498900 | 2:-70373426 | MsG0280010484.01.T01:CDS |
| GGCCGTGGAAATTTCCAAAC+CGG | 0.499246 | 2:-70374413 | MsG0280010484.01.T01:CDS |
| CGGAGGCTTGAGCCGTGCAT+CGG | 0.506028 | 2:+70374096 | None:intergenic |
| AAGTGGCTTTGAAATTTCTC+CGG | 0.511464 | 2:+70374158 | None:intergenic |
| AAACCGGCTCGGTCCGAACC+GGG | 0.515637 | 2:-70374397 | MsG0280010484.01.T01:CDS |
| GGAGGAGGAGGTCGTAGTTA+CGG | 0.523218 | 2:+70373899 | None:intergenic |
| TTCTCCGGTGAGGTTTCCGA+TGG | 0.523780 | 2:+70374173 | None:intergenic |
| CGAGGAGACAGTGATGGACC+GGG | 0.526691 | 2:+70373842 | None:intergenic |
| ACTTCCACCGCCGTCAACAC+CGG | 0.528044 | 2:-70374261 | MsG0280010484.01.T01:CDS |
| CTCGTTGATGATGCAAATGT+TGG | 0.528656 | 2:-70373379 | MsG0280010484.01.T01:CDS |
| CTTCTCCGACGATGTGGAGA+CGG | 0.530142 | 2:+70373872 | None:intergenic |
| GTCGCTTACCAAGGAGTCCC+GGG | 0.532943 | 2:-70374072 | MsG0280010484.01.T01:CDS |
| CTCCCGGTGGAAAATTCCCT+CGG | 0.533003 | 2:-70373934 | MsG0280010484.01.T01:CDS |
| ACATAACAACAACACGGCCG+TGG | 0.534054 | 2:-70374428 | MsG0280010484.01.T01:CDS |
| TGGCGATAGCTGCAGTGTCG+CGG | 0.534684 | 2:+70373659 | None:intergenic |
| TGTGGAGACGGTGACGGAGG+AGG | 0.537316 | 2:+70373884 | None:intergenic |
| TTCTGATTCCGGGGAGAGCG+AGG | 0.539157 | 2:+70373824 | None:intergenic |
| TCGGGCCAACATAACGAATC+GGG | 0.540780 | 2:+70373564 | None:intergenic |
| CACCGGGAGAACGGCACGGT+CGG | 0.542354 | 2:+70373948 | None:intergenic |
| GCATACTCCGAAGCCGCCGC+CGG | 0.543941 | 2:-70374048 | MsG0280010484.01.T01:CDS |
| GGATTAAATATCTTAGCAGA+TGG | 0.548048 | 2:-70373613 | MsG0280010484.01.T01:CDS |
| AGCCGGTTTGGAAATTTCCA+CGG | 0.549886 | 2:+70374411 | None:intergenic |
| ATCCATAAAGCTCGGCAGCA+CGG | 0.552752 | 2:+70373632 | None:intergenic |
| GATATTTAATCCATAAAGCT+CGG | 0.553451 | 2:+70373624 | None:intergenic |
| CGAATCGGGTCACGTTACTC+GGG | 0.554957 | 2:+70373578 | None:intergenic |
| CGTGACCCGATTCGTTATGT+TGG | 0.557359 | 2:-70373569 | MsG0280010484.01.T01:CDS |
| ACGGCCGTGTTGTTGTTATG+TGG | 0.560779 | 2:+70374430 | None:intergenic |
| GGAGACGGTGACGGAGGAGG+AGG | 0.561047 | 2:+70373887 | None:intergenic |
| TTGAGGGTGTTGGAAGAGGG+AGG | 0.565084 | 2:+70374459 | None:intergenic |
| CATCGGTGCCGGAGCTAGGT+CGG | 0.567651 | 2:+70374113 | None:intergenic |
| CTGCTTCACGTGCGACGTTG+AGG | 0.571118 | 2:+70373728 | None:intergenic |
| CCGGTTCAACCCGAACCGAT+TGG | 0.571365 | 2:-70374338 | MsG0280010484.01.T01:CDS |
| TGGAAATTTCCAAACCGGCT+CGG | 0.578350 | 2:-70374408 | MsG0280010484.01.T01:CDS |
| CATTTGACAGAAACCCGGTT+CGG | 0.579637 | 2:+70374384 | None:intergenic |
| GTCCAGGGTGTCATATCCAT+AGG | 0.579769 | 2:+70373229 | None:intergenic |
| GGTTTCCGATGGGAACAAGC+TGG | 0.586510 | 2:+70374184 | None:intergenic |
| GGAGAGCGAGGAGACAGTGA+TGG | 0.588961 | 2:+70373836 | None:intergenic |
| CTAGCTCCGGCACCGATGCA+CGG | 0.590713 | 2:-70374108 | MsG0280010484.01.T01:CDS |
| GATGGGAACAAGCTGGAGAT+CGG | 0.591431 | 2:+70374191 | None:intergenic |
| AGCCTCCGCGTCGCTTACCA+AGG | 0.596298 | 2:-70374081 | MsG0280010484.01.T01:CDS |
| GTTCCCATCGGAAACCTCAC+CGG | 0.598886 | 2:-70374177 | MsG0280010484.01.T01:CDS |
| GCCACTTCGAATTGGTCGCA+AGG | 0.603521 | 2:+70373997 | None:intergenic |
| GAAAACTTTGCAGCTATCAA+CGG | 0.603638 | 2:-70374231 | MsG0280010484.01.T01:CDS |
| GAACACACATTAACAAAACT+CGG | 0.604317 | 2:-70373751 | MsG0280010484.01.T01:CDS |
| TCCAGGGTGTCATATCCATA+GGG | 0.610493 | 2:+70373230 | None:intergenic |
| TCGCATTGAGATAAAGCTTG+TGG | 0.611630 | 2:+70373772 | None:intergenic |
| GTTGAACTTCTCCGACGATG+TGG | 0.613892 | 2:+70373866 | None:intergenic |
| CGGCTTCGGAGTATGCTCCC+GGG | 0.614890 | 2:+70374055 | None:intergenic |
| ATCGGCGCCGGTGTTGACGG+CGG | 0.615138 | 2:+70374254 | None:intergenic |
| AGAACCAATAATTCCACGTA+CGG | 0.615247 | 2:-70373542 | MsG0280010484.01.T01:CDS |
| GCTTTGAAATTTCTCCGGTG+AGG | 0.615736 | 2:+70374163 | None:intergenic |
| CGTCGGAGAAGTTCAACTCC+CGG | 0.615992 | 2:-70373860 | MsG0280010484.01.T01:CDS |
| CGACGATGTGGAGACGGTGA+CGG | 0.619755 | 2:+70373878 | None:intergenic |
| AAACCCGGTTCGGACCGAGC+CGG | 0.621805 | 2:+70374394 | None:intergenic |
| TCCTTGCGACCAATTCGAAG+TGG | 0.628248 | 2:-70373998 | MsG0280010484.01.T01:CDS |
| GATCTCCAGCTTGTTCCCAT+CGG | 0.632237 | 2:-70374189 | MsG0280010484.01.T01:CDS |
| GAAGCAGTTGACGATACAGC+AGG | 0.633337 | 2:-70373712 | MsG0280010484.01.T01:CDS |
| AGTTAGAGCACAAAACGCGT+TGG | 0.634200 | 2:-70373299 | MsG0280010484.01.T01:CDS |
| GTCGGCGATCCAAAGCTCGA+CGG | 0.635888 | 2:+70373966 | None:intergenic |
| TTTCCACCGGGAGAACGGCA+CGG | 0.637127 | 2:+70373944 | None:intergenic |
| TACGGTGGATTGAACCGCCG+AGG | 0.637797 | 2:+70373917 | None:intergenic |
| TTAAATGGACGATCCGTACG+TGG | 0.638943 | 2:+70373529 | None:intergenic |
| TGACGATACAGCAGGTGCCG+CGG | 0.640188 | 2:-70373704 | MsG0280010484.01.T01:CDS |
| CGTCACCGTCTCCACATCGT+CGG | 0.640602 | 2:-70373877 | MsG0280010484.01.T01:CDS |
| TCTCCGGTGAGGTTTCCGAT+GGG | 0.641911 | 2:+70374174 | None:intergenic |
| ACGGTGGATTGAACCGCCGA+GGG | 0.644785 | 2:+70373918 | None:intergenic |
| CGACCGTGCCGTTCTCCCGG+TGG | 0.649026 | 2:-70373947 | MsG0280010484.01.T01:CDS |
| CATCAACGAGCCTAATCGGA+CGG | 0.659113 | 2:+70373392 | None:intergenic |
| AAGCACATTTGACAGAAACC+CGG | 0.662936 | 2:+70374379 | None:intergenic |
| CTCCTTGGTAAGCGACGCGG+AGG | 0.666074 | 2:+70374079 | None:intergenic |
| CGATGTGGAGACGGTGACGG+AGG | 0.671566 | 2:+70373881 | None:intergenic |
| GGACTCCTTGGTAAGCGACG+CGG | 0.679370 | 2:+70374076 | None:intergenic |
| GGAGGAGGTCGTAGTTACGG+TGG | 0.683087 | 2:+70373902 | None:intergenic |
| CTAATCGGACGGTTACGATG+AGG | 0.686334 | 2:+70373403 | None:intergenic |
| ACCCTATGGATATGACACCC+TGG | 0.690768 | 2:-70373231 | MsG0280010484.01.T01:CDS |
| TCAACCACATAACAACAACA+CGG | 0.716010 | 2:-70374434 | MsG0280010484.01.T01:CDS |
| GTTAGTTGCAACAAACTCCG+CGG | 0.733174 | 2:+70373687 | None:intergenic |
| CCGGTGGAAAATTCCCTCGG+CGG | 0.738047 | 2:-70373931 | MsG0280010484.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACAATACTTGTTTTAAA+TGG | + | Chr2:70374185-70374204 | None:intergenic | 15.0% |
| ! | GATATTTAATCCATAAAGCT+CGG | + | Chr2:70374075-70374094 | None:intergenic | 25.0% |
| GAACACACATTAACAAAACT+CGG | - | Chr2:70373945-70373964 | MsG0280010484.01.T01:CDS | 30.0% | |
| GGATTAAATATCTTAGCAGA+TGG | - | Chr2:70374083-70374102 | MsG0280010484.01.T01:CDS | 30.0% | |
| GTTTAACGAAGATTGAATCA+AGG | - | Chr2:70374270-70374289 | MsG0280010484.01.T01:CDS | 30.0% | |
| TACGGTTCAATTTATGAATC+CGG | - | Chr2:70373339-70373358 | MsG0280010484.01.T01:CDS | 30.0% | |
| TGTTATGTGGTTGAAATTGA+GGG | + | Chr2:70373256-70373275 | None:intergenic | 30.0% | |
| TTGTTATGTGGTTGAAATTG+AGG | + | Chr2:70373257-70373276 | None:intergenic | 30.0% | |
| ! | AGATATTCTTTTCTGATTCC+GGG | + | Chr2:70373885-70373904 | None:intergenic | 30.0% |
| ! | ATTGTTTTCGCTCATGATAA+AGG | - | Chr2:70374197-70374216 | MsG0280010484.01.T01:CDS | 30.0% |
| ! | CAGATATTCTTTTCTGATTC+CGG | + | Chr2:70373886-70373905 | None:intergenic | 30.0% |
| !!! | TGTTGATTTTGAAGCTTCAA+TGG | - | Chr2:70374370-70374389 | MsG0280010484.01.T01:CDS | 30.0% |
| AGAACCAATAATTCCACGTA+CGG | - | Chr2:70374154-70374173 | MsG0280010484.01.T01:CDS | 35.0% | |
| GAAAACTTTGCAGCTATCAA+CGG | - | Chr2:70373465-70373484 | MsG0280010484.01.T01:CDS | 35.0% | |
| GTTTCTGTCAAATGTGCTTA+CGG | - | Chr2:70373321-70373340 | MsG0280010484.01.T01:CDS | 35.0% | |
| TCAACCACATAACAACAACA+CGG | - | Chr2:70373262-70373281 | MsG0280010484.01.T01:CDS | 35.0% | |
| ! | ACGTCTTTCTTGAGAGTTTT+GGG | - | Chr2:70374437-70374456 | MsG0280010484.01.T01:CDS | 35.0% |
| ! | GATAGCTGCAAAGTTTTCAT+CGG | + | Chr2:70373463-70373482 | None:intergenic | 35.0% |
| ! | GATATTCTTTTCTGATTCCG+GGG | + | Chr2:70373884-70373903 | None:intergenic | 35.0% |
| !! | AAGTGGCTTTGAAATTTCTC+CGG | + | Chr2:70373541-70373560 | None:intergenic | 35.0% |
| !! | TACGTGGAATTATTGGTTCT+CGG | + | Chr2:70374154-70374173 | None:intergenic | 35.0% |
| !!! | GATCGGTTATGTTTGTTTTG+TGG | + | Chr2:70373491-70373510 | None:intergenic | 35.0% |
| AAGCACATTTGACAGAAACC+CGG | + | Chr2:70373320-70373339 | None:intergenic | 40.0% | |
| TCGCATTGAGATAAAGCTTG+TGG | + | Chr2:70373927-70373946 | None:intergenic | 40.0% | |
| ! | CACGTCTTTCTTGAGAGTTT+TGG | - | Chr2:70374436-70374455 | MsG0280010484.01.T01:CDS | 40.0% |
| ! | GCAGTTTGGATAAGCTTTTC+CGG | + | Chr2:70373670-70373689 | None:intergenic | 40.0% |
| ! | TCGGAGATTGTTAACGGTTT+TGG | + | Chr2:70373567-70373586 | None:intergenic | 40.0% |
| ! | TGCTTTCAGCTTTTGCGTTT+AGG | - | Chr2:70374240-70374259 | MsG0280010484.01.T01:CDS | 40.0% |
| !! | AAATTGAGGGTGTTGGAAGA+GGG | + | Chr2:70373243-70373262 | None:intergenic | 40.0% |
| !! | ACGTGGAATTATTGGTTCTC+GGG | + | Chr2:70374153-70374172 | None:intergenic | 40.0% |
| !! | CTCGTTGATGATGCAAATGT+TGG | - | Chr2:70374317-70374336 | MsG0280010484.01.T01:CDS | 40.0% |
| !! | GAGATTGTTAACGGTTTTGG+TGG | + | Chr2:70373564-70373583 | None:intergenic | 40.0% |
| !!! | AGTTTTGGGTAGTTACCCTA+TGG | - | Chr2:70374451-70374470 | MsG0280010484.01.T01:CDS | 40.0% |
| AGCACATGAGCTTTGCCAAT+CGG | + | Chr2:70373376-70373395 | None:intergenic | 45.0% | |
| AGTTAGAGCACAAAACGCGT+TGG | - | Chr2:70374397-70374416 | MsG0280010484.01.T01:CDS | 45.0% | |
| ATGAGCTTTGCCAATCGGTT+CGG | + | Chr2:70373371-70373390 | None:intergenic | 45.0% | |
| CAAGGAATTGCTTCGCAGTT+TGG | + | Chr2:70373684-70373703 | None:intergenic | 45.0% | |
| CATTTGACAGAAACCCGGTT+CGG | + | Chr2:70373315-70373334 | None:intergenic | 45.0% | |
| CGATCCGTACGTGGAATTAT+TGG | + | Chr2:70374161-70374180 | None:intergenic | 45.0% | |
| CTTGAAACGCCACTTCGAAT+TGG | + | Chr2:70373710-70373729 | None:intergenic | 45.0% | |
| GCATCATCAACGAGCCTAAT+CGG | + | Chr2:70374311-70374330 | None:intergenic | 45.0% | |
| GCTAGGTCGGAGATTGTTAA+CGG | + | Chr2:70373573-70373592 | None:intergenic | 45.0% | |
| GTTAGTTGCAACAAACTCCG+CGG | + | Chr2:70374012-70374031 | None:intergenic | 45.0% | |
| TGGAAATTTCCAAACCGGCT+CGG | - | Chr2:70373288-70373307 | MsG0280010484.01.T01:CDS | 45.0% | |
| TTAAATGGACGATCCGTACG+TGG | + | Chr2:70374170-70374189 | None:intergenic | 45.0% | |
| ! | GTGGTTGAAATTGAGGGTGT+TGG | + | Chr2:70373250-70373269 | None:intergenic | 45.0% |
| ! | GTTTGGATAAGCTTTTCCGG+CGG | + | Chr2:70373667-70373686 | None:intergenic | 45.0% |
| ! | TCCAGGGTGTCATATCCATA+GGG | + | Chr2:70374469-70374488 | None:intergenic | 45.0% |
| !! | AGCCGGTTTGGAAATTTCCA+CGG | + | Chr2:70373288-70373307 | None:intergenic | 45.0% |
| !! | GAAATTGAGGGTGTTGGAAG+AGG | + | Chr2:70373244-70373263 | None:intergenic | 45.0% |
| !! | GCTTTGAAATTTCTCCGGTG+AGG | + | Chr2:70373536-70373555 | None:intergenic | 45.0% |
| !! | GTTAACGGTTTTGGTGGAAG+TGG | + | Chr2:70373558-70373577 | None:intergenic | 45.0% |
| AACAATCTCCGACCTAGCTC+CGG | - | Chr2:70373575-70373594 | MsG0280010484.01.T01:CDS | 50.0% | |
| ACATAACAACAACACGGCCG+TGG | - | Chr2:70373268-70373287 | MsG0280010484.01.T01:CDS | 50.0% | |
| ACCCTATGGATATGACACCC+TGG | - | Chr2:70374465-70374484 | MsG0280010484.01.T01:CDS | 50.0% | |
| ACGAATCGGGTCACGTTACT+CGG | + | Chr2:70374122-70374141 | None:intergenic | 50.0% | |
| ATCCATAAAGCTCGGCAGCA+CGG | + | Chr2:70374067-70374086 | None:intergenic | 50.0% | |
| CATCAACGAGCCTAATCGGA+CGG | + | Chr2:70374307-70374326 | None:intergenic | 50.0% | |
| CTAATCGGACGGTTACGATG+AGG | + | Chr2:70374296-70374315 | None:intergenic | 50.0% | |
| CTCATCGTAACCGTCCGATT+AGG | - | Chr2:70374294-70374313 | MsG0280010484.01.T01:CDS | 50.0% | |
| CTCGGGCCAACATAACGAAT+CGG | + | Chr2:70374136-70374155 | None:intergenic | 50.0% | |
| GAAGCAGTTGACGATACAGC+AGG | - | Chr2:70373984-70374003 | MsG0280010484.01.T01:CDS | 50.0% | |
| GATGGGAACAAGCTGGAGAT+CGG | + | Chr2:70373508-70373527 | None:intergenic | 50.0% | |
| GGCCGTGGAAATTTCCAAAC+CGG | - | Chr2:70373283-70373302 | MsG0280010484.01.T01:CDS | 50.0% | |
| GTTGAACTTCTCCGACGATG+TGG | + | Chr2:70373833-70373852 | None:intergenic | 50.0% | |
| TCCTTGCGACCAATTCGAAG+TGG | - | Chr2:70373698-70373717 | MsG0280010484.01.T01:CDS | 50.0% | |
| TCGGGCCAACATAACGAATC+GGG | + | Chr2:70374135-70374154 | None:intergenic | 50.0% | |
| ! | ACGGCCGTGTTGTTGTTATG+TGG | + | Chr2:70373269-70373288 | None:intergenic | 50.0% |
| ! | CGTGACCCGATTCGTTATGT+TGG | - | Chr2:70374127-70374146 | MsG0280010484.01.T01:CDS | 50.0% |
| ! | GATCTCCAGCTTGTTCCCAT+CGG | - | Chr2:70373507-70373526 | MsG0280010484.01.T01:CDS | 50.0% |
| ! | GGAATTTTCCACCGGGAGAA+CGG | + | Chr2:70373760-70373779 | None:intergenic | 50.0% |
| ! | GTCCAGGGTGTCATATCCAT+AGG | + | Chr2:70374470-70374489 | None:intergenic | 50.0% |
| ! | TGAGCTTTGCCAATCGGTTC+GGG | + | Chr2:70373370-70373389 | None:intergenic | 50.0% |
| ! | TGCAAAGTTTTCATCGGCGC+CGG | + | Chr2:70373457-70373476 | None:intergenic | 50.0% |
| !! | AAACGCGTTGGCTGAAGTTC+AGG | - | Chr2:70374409-70374428 | MsG0280010484.01.T01:CDS | 50.0% |
| CGAATCGGGTCACGTTACTC+GGG | + | Chr2:70374121-70374140 | None:intergenic | 55.0% | |
| CGTCGGAGAAGTTCAACTCC+CGG | - | Chr2:70373836-70373855 | MsG0280010484.01.T01:CDS | 55.0% | |
| CGTTTCAAGCCGTCGAGCTT+TGG | - | Chr2:70373721-70373740 | MsG0280010484.01.T01:CDS | 55.0% | |
| CTCCCGGTGGAAAATTCCCT+CGG | - | Chr2:70373762-70373781 | MsG0280010484.01.T01:CDS | 55.0% | |
| CTTCTCCGACGATGTGGAGA+CGG | + | Chr2:70373827-70373846 | None:intergenic | 55.0% | |
| GCCACTTCGAATTGGTCGCA+AGG | + | Chr2:70373702-70373721 | None:intergenic | 55.0% | |
| GGAGGAGGAGGTCGTAGTTA+CGG | + | Chr2:70373800-70373819 | None:intergenic | 55.0% | |
| GGTTTCCGATGGGAACAAGC+TGG | + | Chr2:70373515-70373534 | None:intergenic | 55.0% | |
| GTTCCCATCGGAAACCTCAC+CGG | - | Chr2:70373519-70373538 | MsG0280010484.01.T01:CDS | 55.0% | |
| TCCATAAAGCTCGGCAGCAC+GGG | + | Chr2:70374066-70374085 | None:intergenic | 55.0% | |
| TCTCCGGTGAGGTTTCCGAT+GGG | + | Chr2:70373525-70373544 | None:intergenic | 55.0% | |
| TTCTCCGGTGAGGTTTCCGA+TGG | + | Chr2:70373526-70373545 | None:intergenic | 55.0% | |
| ! | TGGATAAGCTTTTCCGGCGG+CGG | + | Chr2:70373664-70373683 | None:intergenic | 55.0% |
| !! | CCAATCGGTTCGGGTTGAAC+CGG | + | Chr2:70373361-70373380 | None:intergenic | 55.0% |
| !! | TTGAGGGTGTTGGAAGAGGG+AGG | + | Chr2:70373240-70373259 | None:intergenic | 55.0% |
| ACTTCCACCGCCGTCAACAC+CGG | - | Chr2:70373435-70373454 | MsG0280010484.01.T01:CDS | 60.0% | |
| AGTATGCTCCCGGGACTCCT+TGG | + | Chr2:70373635-70373654 | None:intergenic | 60.0% | |
| CCGGTGGAAAATTCCCTCGG+CGG | - | Chr2:70373765-70373784 | MsG0280010484.01.T01:CDS | 60.0% | |
| CCGGTTCAACCCGAACCGAT+TGG | - | Chr2:70373358-70373377 | MsG0280010484.01.T01:CDS | 60.0% | |
| CGACGATGTGGAGACGGTGA+CGG | + | Chr2:70373821-70373840 | None:intergenic | 60.0% | |
| CGTCACCGTCTCCACATCGT+CGG | - | Chr2:70373819-70373838 | MsG0280010484.01.T01:CDS | 60.0% | |
| CGTCGCTTACCAAGGAGTCC+CGG | - | Chr2:70373623-70373642 | MsG0280010484.01.T01:CDS | 60.0% | |
| CTGCTTCACGTGCGACGTTG+AGG | + | Chr2:70373971-70373990 | None:intergenic | 60.0% | |
| GGACTCCTTGGTAAGCGACG+CGG | + | Chr2:70373623-70373642 | None:intergenic | 60.0% | |
| GGAGAGCGAGGAGACAGTGA+TGG | + | Chr2:70373863-70373882 | None:intergenic | 60.0% | |
| GGAGGAGGTCGTAGTTACGG+TGG | + | Chr2:70373797-70373816 | None:intergenic | 60.0% | |
| GTCGCTTACCAAGGAGTCCC+GGG | - | Chr2:70373624-70373643 | MsG0280010484.01.T01:CDS | 60.0% | |
| GTCGGCGATCCAAAGCTCGA+CGG | + | Chr2:70373733-70373752 | None:intergenic | 60.0% | |
| TGGCGATAGCTGCAGTGTCG+CGG | + | Chr2:70374040-70374059 | None:intergenic | 60.0% | |
| TTCTGATTCCGGGGAGAGCG+AGG | + | Chr2:70373875-70373894 | None:intergenic | 60.0% | |
| TTTCCACCGGGAGAACGGCA+CGG | + | Chr2:70373755-70373774 | None:intergenic | 60.0% | |
| ! | CCGCCGAGGGAATTTTCCAC+CGG | + | Chr2:70373768-70373787 | None:intergenic | 60.0% |
| ! | CGCCGAGGGAATTTTCCACC+GGG | + | Chr2:70373767-70373786 | None:intergenic | 60.0% |
| ! | TGACGATACAGCAGGTGCCG+CGG | - | Chr2:70373992-70374011 | MsG0280010484.01.T01:CDS | 60.0% |
| !! | ACGGTGGATTGAACCGCCGA+GGG | + | Chr2:70373781-70373800 | None:intergenic | 60.0% |
| !! | AGGGTGTTGGAAGAGGGAGG+TGG | + | Chr2:70373237-70373256 | None:intergenic | 60.0% |
| !! | CGAGGAGACAGTGATGGACC+GGG | + | Chr2:70373857-70373876 | None:intergenic | 60.0% |
| !! | GCGAGGAGACAGTGATGGAC+CGG | + | Chr2:70373858-70373877 | None:intergenic | 60.0% |
| !! | TACGGTGGATTGAACCGCCG+AGG | + | Chr2:70373782-70373801 | None:intergenic | 60.0% |
| !! | TTCATCGGCGCCGGTGTTGA+CGG | + | Chr2:70373448-70373467 | None:intergenic | 60.0% |
| AGCCTCCGCGTCGCTTACCA+AGG | - | Chr2:70373615-70373634 | MsG0280010484.01.T01:CDS | 65.0% | |
| CACTGTCTCCTCGCTCTCCC+CGG | - | Chr2:70373864-70373883 | MsG0280010484.01.T01:CDS | 65.0% | |
| CGGAGGCTTGAGCCGTGCAT+CGG | + | Chr2:70373603-70373622 | None:intergenic | 65.0% | |
| CGGCTTCGGAGTATGCTCCC+GGG | + | Chr2:70373644-70373663 | None:intergenic | 65.0% | |
| CTCCTTGGTAAGCGACGCGG+AGG | + | Chr2:70373620-70373639 | None:intergenic | 65.0% | |
| GCCCGTGCTGCCGAGCTTTA+TGG | - | Chr2:70374062-70374081 | MsG0280010484.01.T01:CDS | 65.0% | |
| GCGGCTTCGGAGTATGCTCC+CGG | + | Chr2:70373645-70373664 | None:intergenic | 65.0% | |
| ! | AGCTTTTCCGGCGGCGGCTT+CGG | + | Chr2:70373658-70373677 | None:intergenic | 65.0% |
| ! | CGATGTGGAGACGGTGACGG+AGG | + | Chr2:70373818-70373837 | None:intergenic | 65.0% |
| ! | CTTGAGCCGTGCATCGGTGC+CGG | + | Chr2:70373597-70373616 | None:intergenic | 65.0% |
| !! | AAACCCGGTTCGGACCGAGC+CGG | + | Chr2:70373305-70373324 | None:intergenic | 65.0% |
| !! | AAACCGGCTCGGTCCGAACC+GGG | - | Chr2:70373299-70373318 | MsG0280010484.01.T01:CDS | 65.0% |
| !! | CAAACCGGCTCGGTCCGAAC+CGG | - | Chr2:70373298-70373317 | MsG0280010484.01.T01:CDS | 65.0% |
| !! | CATCGGTGCCGGAGCTAGGT+CGG | + | Chr2:70373586-70373605 | None:intergenic | 65.0% |
| !! | CTAGCTCCGGCACCGATGCA+CGG | - | Chr2:70373588-70373607 | MsG0280010484.01.T01:CDS | 65.0% |
| !! | GGTGTTGACGGCGGTGGAAG+TGG | + | Chr2:70373436-70373455 | None:intergenic | 65.0% |
| !! | TGTGGAGACGGTGACGGAGG+AGG | + | Chr2:70373815-70373834 | None:intergenic | 65.0% |
| CACCGGGAGAACGGCACGGT+CGG | + | Chr2:70373751-70373770 | None:intergenic | 70.0% | |
| GCATACTCCGAAGCCGCCGC+CGG | - | Chr2:70373648-70373667 | MsG0280010484.01.T01:CDS | 70.0% | |
| ! | CGGTTCGGACCGAGCCGGTT+TGG | + | Chr2:70373300-70373319 | None:intergenic | 70.0% |
| !! | ATCGGCGCCGGTGTTGACGG+CGG | + | Chr2:70373445-70373464 | None:intergenic | 70.0% |
| !! | CGTGCATCGGTGCCGGAGCT+AGG | + | Chr2:70373590-70373609 | None:intergenic | 70.0% |
| !! | GGAGACGGTGACGGAGGAGG+AGG | + | Chr2:70373812-70373831 | None:intergenic | 70.0% |
| AAGCTCGGCAGCACGGGCGC+TGG | + | Chr2:70374060-70374079 | None:intergenic | 75.0% | |
| ! | CGACCGTGCCGTTCTCCCGG+TGG | - | Chr2:70373749-70373768 | MsG0280010484.01.T01:CDS | 75.0% |
| ! | CGCCGACCGTGCCGTTCTCC+CGG | - | Chr2:70373746-70373765 | MsG0280010484.01.T01:CDS | 75.0% |
| !!! | GGCGCCGGTGTTGACGGCGG+TGG | + | Chr2:70373442-70373461 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 70373219 | 70374499 | 70373219 | ID=MsG0280010484.01;Name=MsG0280010484.01 |
| Chr2 | mRNA | 70373219 | 70374499 | 70373219 | ID=MsG0280010484.01.T01;Parent=MsG0280010484.01;Name=MsG0280010484.01.T01;_AED=0.20;_eAED=0.20;_QI=0|-1|0|1|-1|1|1|0|426 |
| Chr2 | exon | 70373219 | 70374499 | 70373219 | ID=MsG0280010484.01.T01:exon:11205;Parent=MsG0280010484.01.T01 |
| Chr2 | CDS | 70373219 | 70374499 | 70373219 | ID=MsG0280010484.01.T01:cds;Parent=MsG0280010484.01.T01 |
| Gene Sequence |
| Protein sequence |
