Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015701.01.T01 | XP_013460937.1 | 92.797 | 236 | 10 | 2 | 54 | 282 | 1 | 236 | 5.20E-156 | 444 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015701.01.T01 | A0A072UZV4 | 92.797 | 236 | 10 | 2 | 54 | 282 | 1 | 236 | 2.48e-156 | 444 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000982.01 | MsG0380015701.01 | 0.804978 | 1.666126e-49 | 8.711511e-47 |
MsG0180003572.01 | MsG0380015701.01 | 0.832853 | 7.457026e-56 | 8.438576e-53 |
MsG0380015701.01 | MsG0480020907.01 | 0.801269 | 9.751367e-49 | 4.637121e-46 |
MsG0380015701.01 | MsG0480022696.01 | 0.806649 | 7.422742e-50 | 4.050365e-47 |
MsG0380015701.01 | MsG0580024339.01 | 0.801619 | 8.267917e-49 | 3.966369e-46 |
MsG0380015701.01 | MsG0580027320.01 | 0.826292 | 2.939353e-54 | 2.745087e-51 |
MsG0380015701.01 | MsG0580027925.01 | 0.806812 | 6.857648e-50 | 3.758158e-47 |
MsG0380015701.01 | MsG0580029924.01 | 0.811656 | 6.278418e-51 | 3.908488e-48 |
MsG0380015701.01 | MsG0680035346.01 | 0.800697 | 1.276424e-48 | 5.982357e-46 |
MsG0380015701.01 | MsG0680035475.01 | 0.809763 | 1.611236e-50 | 9.542624e-48 |
MsG0380015701.01 | MsG0780039423.01 | 0.804719 | 1.887093e-49 | 9.801351e-47 |
MsG0380015701.01 | MsG0780040545.01 | 0.804045 | 2.608570e-49 | 1.331478e-46 |
MsG0380015701.01 | MsG0880042779.01 | 0.812396 | 4.330848e-51 | 2.750668e-48 |
MsG0380015701.01 | MsG0880044416.01 | 0.812264 | 4.627697e-51 | 2.928683e-48 |
MsG0280007955.01 | MsG0380015701.01 | 0.812526 | 4.055980e-51 | 2.584938e-48 |
MsG0280008936.01 | MsG0380015701.01 | 0.822091 | 2.851724e-53 | 2.363242e-50 |
MsG0280010177.01 | MsG0380015701.01 | 0.838718 | 2.434080e-57 | 3.288378e-54 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015701.01.T01 | MTR_3g075030 | 92.797 | 236 | 10 | 2 | 54 | 282 | 1 | 236 | 6.30e-160 | 444 |
MsG0380015701.01.T01 | MTR_4g103840 | 45.091 | 275 | 99 | 12 | 42 | 277 | 1 | 262 | 9.01e-56 | 181 |
MsG0380015701.01.T01 | MTR_8g075630 | 83.636 | 55 | 9 | 0 | 1 | 55 | 63 | 117 | 7.64e-27 | 104 |
MsG0380015701.01.T01 | MTR_5g071480 | 83.636 | 55 | 9 | 0 | 1 | 55 | 151 | 205 | 1.65e-26 | 105 |
MsG0380015701.01.T01 | MTR_2g058780 | 83.636 | 55 | 9 | 0 | 1 | 55 | 216 | 270 | 4.71e-26 | 104 |
MsG0380015701.01.T01 | MTR_0073s0030 | 81.818 | 55 | 10 | 0 | 1 | 55 | 63 | 117 | 9.36e-26 | 101 |
MsG0380015701.01.T01 | MTR_0118s0040 | 81.818 | 55 | 10 | 0 | 1 | 55 | 190 | 244 | 2.07e-25 | 102 |
MsG0380015701.01.T01 | MTR_0550s0010 | 80.000 | 55 | 11 | 0 | 1 | 55 | 148 | 202 | 5.04e-25 | 101 |
MsG0380015701.01.T01 | MTR_8g061330 | 81.818 | 55 | 10 | 0 | 1 | 55 | 307 | 361 | 8.44e-25 | 103 |
MsG0380015701.01.T01 | MTR_6g023190 | 32.463 | 268 | 126 | 9 | 60 | 277 | 28 | 290 | 1.26e-24 | 100 |
MsG0380015701.01.T01 | MTR_0134s0020 | 80.000 | 55 | 11 | 0 | 1 | 55 | 195 | 249 | 1.86e-24 | 100 |
MsG0380015701.01.T01 | MTR_5g061500 | 81.818 | 55 | 10 | 0 | 1 | 55 | 335 | 389 | 2.19e-24 | 102 |
MsG0380015701.01.T01 | MTR_2g084465 | 81.818 | 55 | 10 | 0 | 1 | 55 | 214 | 268 | 2.38e-24 | 100 |
MsG0380015701.01.T01 | MTR_0002s0870 | 80.000 | 55 | 11 | 0 | 1 | 55 | 274 | 328 | 2.49e-24 | 100 |
MsG0380015701.01.T01 | MTR_5g024850 | 80.000 | 55 | 11 | 0 | 1 | 55 | 241 | 295 | 2.68e-24 | 100 |
MsG0380015701.01.T01 | MTR_3g103370 | 76.364 | 55 | 13 | 0 | 1 | 55 | 23 | 77 | 2.83e-24 | 95.1 |
MsG0380015701.01.T01 | MTR_3g101850 | 88.000 | 50 | 6 | 0 | 2 | 51 | 91 | 140 | 3.47e-24 | 97.8 |
MsG0380015701.01.T01 | MTR_5g032940 | 81.818 | 55 | 10 | 0 | 1 | 55 | 196 | 250 | 3.97e-24 | 100 |
MsG0380015701.01.T01 | MTR_4g096800 | 81.481 | 54 | 10 | 0 | 1 | 54 | 118 | 171 | 4.01e-24 | 99.4 |
MsG0380015701.01.T01 | MTR_4g120080 | 77.193 | 57 | 13 | 0 | 1 | 57 | 664 | 720 | 4.53e-23 | 99.4 |
MsG0380015701.01.T01 | MTR_7g022020 | 80.000 | 55 | 11 | 0 | 1 | 55 | 464 | 518 | 4.90e-23 | 99.0 |
MsG0380015701.01.T01 | MTR_1g116150 | 76.364 | 55 | 13 | 0 | 1 | 55 | 222 | 276 | 1.84e-22 | 95.5 |
MsG0380015701.01.T01 | MTR_5g059380 | 76.364 | 55 | 13 | 0 | 1 | 55 | 253 | 307 | 1.95e-22 | 95.9 |
MsG0380015701.01.T01 | MTR_1g012410 | 80.435 | 46 | 9 | 0 | 10 | 55 | 6 | 51 | 6.39e-22 | 87.0 |
MsG0380015701.01.T01 | MTR_1g012040 | 76.364 | 55 | 13 | 0 | 1 | 55 | 335 | 389 | 1.35e-21 | 94.7 |
MsG0380015701.01.T01 | MTR_6g452450 | 74.545 | 55 | 14 | 0 | 1 | 55 | 81 | 135 | 1.99e-21 | 91.3 |
MsG0380015701.01.T01 | MTR_1g107470 | 72.727 | 55 | 15 | 0 | 1 | 55 | 229 | 283 | 2.19e-21 | 92.8 |
MsG0380015701.01.T01 | MTR_4g009520 | 71.154 | 52 | 15 | 0 | 4 | 55 | 50 | 101 | 3.71e-20 | 86.3 |
MsG0380015701.01.T01 | MTR_2g064230 | 74.545 | 55 | 14 | 0 | 1 | 55 | 274 | 328 | 6.24e-20 | 89.7 |
MsG0380015701.01.T01 | MTR_2g066670 | 74.545 | 55 | 14 | 0 | 1 | 55 | 280 | 334 | 7.50e-20 | 89.0 |
MsG0380015701.01.T01 | MTR_2g013330 | 70.370 | 54 | 16 | 0 | 1 | 54 | 313 | 366 | 7.81e-20 | 89.4 |
MsG0380015701.01.T01 | MTR_1g081340 | 72.727 | 55 | 15 | 0 | 1 | 55 | 252 | 306 | 1.89e-19 | 87.8 |
MsG0380015701.01.T01 | MTR_1g106700 | 76.471 | 51 | 12 | 0 | 1 | 51 | 83 | 133 | 2.27e-19 | 85.1 |
MsG0380015701.01.T01 | MTR_1g047970 | 58.333 | 72 | 28 | 1 | 1 | 70 | 81 | 152 | 3.72e-19 | 87.8 |
MsG0380015701.01.T01 | MTR_3g034020 | 72.727 | 55 | 15 | 0 | 1 | 55 | 276 | 330 | 4.81e-18 | 84.0 |
MsG0380015701.01.T01 | MTR_5g071420 | 72.917 | 48 | 13 | 0 | 12 | 59 | 100 | 147 | 6.84e-18 | 80.9 |
MsG0380015701.01.T01 | MTR_3g052540 | 68.000 | 50 | 16 | 0 | 1 | 50 | 166 | 215 | 1.59e-17 | 80.9 |
MsG0380015701.01.T01 | MTR_7g052070 | 64.815 | 54 | 19 | 0 | 1 | 54 | 95 | 148 | 1.70e-17 | 79.7 |
MsG0380015701.01.T01 | MTR_3g031910 | 74.468 | 47 | 12 | 0 | 9 | 55 | 208 | 254 | 2.31e-17 | 80.9 |
MsG0380015701.01.T01 | MTR_5g009440 | 76.744 | 43 | 10 | 0 | 13 | 55 | 33 | 75 | 7.24e-17 | 76.6 |
MsG0380015701.01.T01 | MTR_1g093700 | 66.000 | 50 | 17 | 0 | 1 | 50 | 159 | 208 | 7.93e-17 | 79.3 |
MsG0380015701.01.T01 | MTR_8g023250 | 54.286 | 70 | 31 | 1 | 1 | 70 | 168 | 236 | 1.45e-16 | 78.6 |
MsG0380015701.01.T01 | MTR_8g039580 | 76.744 | 43 | 10 | 0 | 13 | 55 | 33 | 75 | 2.26e-16 | 75.1 |
MsG0380015701.01.T01 | MTR_3g109050 | 70.833 | 48 | 14 | 0 | 8 | 55 | 54 | 101 | 1.02e-15 | 74.7 |
MsG0380015701.01.T01 | MTR_7g104240 | 83.333 | 36 | 6 | 0 | 20 | 55 | 196 | 231 | 1.07e-13 | 70.5 |
MsG0380015701.01.T01 | MTR_3g100990 | 58.000 | 50 | 21 | 0 | 5 | 54 | 334 | 383 | 4.43e-13 | 69.3 |
MsG0380015701.01.T01 | MTR_0032s0020 | 49.123 | 57 | 29 | 0 | 1 | 57 | 453 | 509 | 1.01e-12 | 68.6 |
MsG0380015701.01.T01 | MTR_1g037600 | 47.143 | 70 | 35 | 1 | 1 | 68 | 154 | 223 | 1.19e-12 | 67.0 |
MsG0380015701.01.T01 | MTR_1g092940 | 66.667 | 39 | 13 | 0 | 13 | 51 | 5 | 43 | 1.25e-12 | 63.9 |
MsG0380015701.01.T01 | MTR_3g095720 | 50.877 | 57 | 26 | 1 | 13 | 67 | 21 | 77 | 1.27e-12 | 64.3 |
MsG0380015701.01.T01 | MTR_8g057880 | 53.448 | 58 | 25 | 1 | 13 | 68 | 58 | 115 | 1.29e-12 | 66.6 |
MsG0380015701.01.T01 | MTR_4g132830 | 80.556 | 36 | 7 | 0 | 20 | 55 | 227 | 262 | 1.50e-12 | 67.4 |
MsG0380015701.01.T01 | MTR_8g045705 | 56.863 | 51 | 22 | 0 | 1 | 51 | 212 | 262 | 1.94e-12 | 66.6 |
MsG0380015701.01.T01 | MTR_3g085530 | 55.172 | 58 | 24 | 1 | 13 | 68 | 647 | 704 | 2.06e-12 | 67.8 |
MsG0380015701.01.T01 | MTR_0022s0370 | 72.973 | 37 | 10 | 0 | 19 | 55 | 65 | 101 | 3.70e-12 | 63.5 |
MsG0380015701.01.T01 | MTR_8g015280 | 56.250 | 48 | 21 | 0 | 3 | 50 | 32 | 79 | 3.79e-12 | 63.2 |
MsG0380015701.01.T01 | MTR_5g087830 | 56.250 | 48 | 21 | 0 | 4 | 51 | 99 | 146 | 4.91e-12 | 65.1 |
MsG0380015701.01.T01 | MTR_4g039550 | 46.552 | 58 | 31 | 0 | 1 | 58 | 34 | 91 | 5.28e-12 | 63.5 |
MsG0380015701.01.T01 | MTR_7g070715 | 53.448 | 58 | 25 | 1 | 13 | 68 | 242 | 299 | 5.79e-12 | 65.9 |
MsG0380015701.01.T01 | MTR_7g117680 | 48.276 | 58 | 28 | 1 | 13 | 68 | 34 | 91 | 8.03e-12 | 61.6 |
MsG0380015701.01.T01 | MTR_2g008505 | 54.545 | 55 | 23 | 1 | 13 | 65 | 236 | 290 | 1.21e-11 | 64.7 |
MsG0380015701.01.T01 | MTR_7g018160 | 75.676 | 37 | 9 | 0 | 19 | 55 | 138 | 174 | 1.37e-11 | 63.9 |
MsG0380015701.01.T01 | MTR_0014s0220 | 52.941 | 51 | 23 | 1 | 2 | 51 | 473 | 523 | 1.56e-11 | 65.1 |
MsG0380015701.01.T01 | MTR_3g030470 | 70.270 | 37 | 11 | 0 | 13 | 49 | 90 | 126 | 1.61e-11 | 62.8 |
MsG0380015701.01.T01 | MTR_4g062370 | 50.000 | 58 | 27 | 1 | 13 | 68 | 581 | 638 | 1.80e-11 | 64.7 |
MsG0380015701.01.T01 | MTR_6g024100 | 44.928 | 69 | 36 | 1 | 2 | 68 | 169 | 237 | 2.18e-11 | 62.8 |
MsG0380015701.01.T01 | MTR_6g044370 | 58.182 | 55 | 10 | 1 | 1 | 55 | 183 | 224 | 3.42e-11 | 63.2 |
MsG0380015701.01.T01 | MTR_0003s0250 | 58.974 | 39 | 16 | 0 | 13 | 51 | 85 | 123 | 4.06e-11 | 61.6 |
MsG0380015701.01.T01 | MTR_3g074460 | 48.276 | 58 | 28 | 1 | 13 | 68 | 57 | 114 | 4.62e-11 | 60.5 |
MsG0380015701.01.T01 | MTR_2g016390 | 51.724 | 58 | 26 | 1 | 13 | 68 | 371 | 428 | 5.05e-11 | 63.5 |
MsG0380015701.01.T01 | MTR_4g076760 | 44.928 | 69 | 36 | 1 | 2 | 68 | 386 | 454 | 5.17e-11 | 63.2 |
MsG0380015701.01.T01 | MTR_7g006890 | 48.276 | 58 | 28 | 1 | 13 | 68 | 140 | 197 | 5.69e-11 | 61.6 |
MsG0380015701.01.T01 | MTR_8g019090 | 48.148 | 54 | 28 | 0 | 1 | 54 | 78 | 131 | 6.01e-11 | 61.6 |
MsG0380015701.01.T01 | MTR_0025s0050 | 84.375 | 32 | 5 | 0 | 1 | 32 | 77 | 108 | 6.25e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015701.01.T01 | AT3G48510 | 41.754 | 285 | 98 | 11 | 52 | 277 | 19 | 294 | 5.03e-45 | 154 |
MsG0380015701.01.T01 | AT5G50360 | 37.631 | 287 | 122 | 11 | 42 | 277 | 9 | 289 | 3.09e-43 | 149 |
MsG0380015701.01.T01 | AT5G63350 | 37.153 | 288 | 111 | 10 | 54 | 277 | 21 | 302 | 1.92e-38 | 137 |
MsG0380015701.01.T01 | AT5G40800 | 35.000 | 260 | 130 | 10 | 51 | 277 | 17 | 270 | 1.96e-30 | 115 |
MsG0380015701.01.T01 | AT3G27250 | 34.074 | 270 | 130 | 8 | 51 | 277 | 16 | 280 | 7.96e-28 | 108 |
MsG0380015701.01.T01 | AT3G27250 | 34.074 | 270 | 130 | 8 | 51 | 277 | 16 | 280 | 7.96e-28 | 108 |
MsG0380015701.01.T01 | AT5G40790 | 33.571 | 280 | 125 | 10 | 57 | 277 | 24 | 301 | 1.05e-24 | 100 |
Find 91 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGAATTTCTCAATGGTATT+AGG | 0.240256 | 3:+73921088 | MsG0380015701.01.T01:CDS |
GGATTTATATCGGACGGTTA+TGG | 0.272493 | 3:+73923666 | MsG0380015701.01.T01:CDS |
CTTAGTTTCAACCGGTGATT+TGG | 0.277541 | 3:-73921123 | None:intergenic |
AGTAGAGGATCTGGAGTTTC+GGG | 0.311049 | 3:-73923411 | None:intergenic |
GATTTATATCGGACGGTTAT+GGG | 0.323289 | 3:+73923667 | MsG0380015701.01.T01:CDS |
AAGGACAAGTTTGGTTGGTT+AGG | 0.328445 | 3:+73923733 | MsG0380015701.01.T01:CDS |
ATGTTTCTCATCAGCATAAC+TGG | 0.329177 | 3:-73921156 | None:intergenic |
GAGGAAGGAAGTAGAGGATC+TGG | 0.372917 | 3:-73923420 | None:intergenic |
AAGTAGAGGATCTGGAGTTT+CGG | 0.378062 | 3:-73923412 | None:intergenic |
CCATTATGAACCACTCGCTT+TGG | 0.384972 | 3:-73921068 | None:intergenic |
CAAATCACCGGTTGAAACTA+AGG | 0.387539 | 3:+73921124 | MsG0380015701.01.T01:CDS |
CGAGGAGAGGAAAGTGAAAC+TGG | 0.397568 | 3:+73923626 | MsG0380015701.01.T01:CDS |
GTGGAGGAATAGTGCATATA+GGG | 0.406861 | 3:+73923698 | MsG0380015701.01.T01:CDS |
CTCAATGGTATTAGGAGCTC+TGG | 0.410142 | 3:+73921096 | MsG0380015701.01.T01:CDS |
CCAAAGCGAGTGGTTCATAA+TGG | 0.412990 | 3:+73921068 | MsG0380015701.01.T01:CDS |
GATCTTACAGCGGTAGGGTT+AGG | 0.420934 | 3:+73923516 | MsG0380015701.01.T01:CDS |
TCGGAGGCGGTGCATGGCTT+AGG | 0.448865 | 3:-73923273 | None:intergenic |
AGGACAAGTTTGGTTGGTTA+GGG | 0.450227 | 3:+73923734 | MsG0380015701.01.T01:CDS |
GAATAGTGCATATAGGGAAA+TGG | 0.450785 | 3:+73923704 | MsG0380015701.01.T01:CDS |
GGCAGCATGGAGATGAAGGC+TGG | 0.454057 | 3:+73923577 | MsG0380015701.01.T01:CDS |
AAGTGGACAGAATCATGTTA+AGG | 0.454487 | 3:+73923235 | MsG0380015701.01.T01:CDS |
ATCCCACCCTTAGTTTCAAC+CGG | 0.456086 | 3:-73921131 | None:intergenic |
CGTGGAGGAATAGTGCATAT+AGG | 0.458439 | 3:+73923697 | MsG0380015701.01.T01:CDS |
TAACATGATTCTGTCCACTT+TGG | 0.465109 | 3:-73923232 | None:intergenic |
AACTGTCCCTCCACCGGCGG+TGG | 0.469426 | 3:+73923371 | MsG0380015701.01.T01:CDS |
ACTGGAGAAGGACACGTGTC+CGG | 0.470490 | 3:+73923644 | MsG0380015701.01.T01:CDS |
CTGGAGAAGGACACGTGTCC+GGG | 0.485377 | 3:+73923645 | MsG0380015701.01.T01:CDS |
GTGAGAGTACAGTACGCGTA+TGG | 0.487916 | 3:+73923789 | MsG0380015701.01.T01:CDS |
GCCGTGCGATGCGTGGAGAT+TGG | 0.491883 | 3:+73923827 | MsG0380015701.01.T01:CDS |
TTCATAATGGAATTTCTCAA+TGG | 0.500916 | 3:+73921081 | MsG0380015701.01.T01:CDS |
TGGTGGGTGAAGGACAAGTT+TGG | 0.508774 | 3:+73923724 | MsG0380015701.01.T01:CDS |
GTGAAAGAGGATTCACGTGC+AGG | 0.513519 | 3:+73923766 | MsG0380015701.01.T01:CDS |
CGTGAATCCTCTTTCACTGT+AGG | 0.519583 | 3:-73923760 | None:intergenic |
TCGACGTCGGAGGCGGTGCA+TGG | 0.520028 | 3:-73923279 | None:intergenic |
AGAGTCACCACCGCCGGTGG+AGG | 0.532600 | 3:-73923378 | None:intergenic |
CACGTGTCCGGGATTTATAT+CGG | 0.538547 | 3:+73923656 | MsG0380015701.01.T01:CDS |
GGGTGAAGGACAAGTTTGGT+TGG | 0.538666 | 3:+73923728 | MsG0380015701.01.T01:CDS |
CTGGAGTTTCGGGAAGCAGC+GGG | 0.540339 | 3:-73923401 | None:intergenic |
CTTACAGCGGTAGGGTTAGG+AGG | 0.546084 | 3:+73923519 | MsG0380015701.01.T01:CDS |
AAGGTGGATCTTACAGCGGT+AGG | 0.548232 | 3:+73923510 | MsG0380015701.01.T01:CDS |
GCTGATGAGAAACATCGATC+AGG | 0.551261 | 3:+73921164 | MsG0380015701.01.T01:CDS |
CAGGCCAATGGACTGTGTAA+TGG | 0.551480 | 3:+73921183 | MsG0380015701.01.T01:CDS |
CCTTCTCCGATGTGGTAGCA+TGG | 0.556821 | 3:-73923491 | None:intergenic |
AAAAGCGTCGACGTCGGAGG+CGG | 0.558175 | 3:-73923286 | None:intergenic |
ACGTGGCAGCATGGAGATGA+AGG | 0.562247 | 3:+73923573 | MsG0380015701.01.T01:CDS |
AGGGTACCCTACAGTGAAAG+AGG | 0.563763 | 3:+73923753 | MsG0380015701.01.T01:CDS |
TAACCGTCCGATATAAATCC+CGG | 0.564401 | 3:-73923663 | None:intergenic |
TAGTGCATATAGGGAAATGG+TGG | 0.564825 | 3:+73923707 | MsG0380015701.01.T01:CDS |
GAAGAGTGCCGTGCGATGCG+TGG | 0.568763 | 3:+73923820 | MsG0380015701.01.T01:CDS |
AGGTGGATCTTACAGCGGTA+GGG | 0.572112 | 3:+73923511 | MsG0380015701.01.T01:CDS |
TGCTACCACATCGGAGAAGG+TGG | 0.572613 | 3:+73923494 | MsG0380015701.01.T01:CDS |
AGCGGGAGAGTCACCACCGC+CGG | 0.578527 | 3:-73923384 | None:intergenic |
TATAGGGAAATGGTGGGTGA+AGG | 0.578922 | 3:+73923714 | MsG0380015701.01.T01:CDS |
GAGTCACCACCGCCGGTGGA+GGG | 0.581071 | 3:-73923377 | None:intergenic |
AGAAACATCGATCAGGCCAA+TGG | 0.582461 | 3:+73921171 | MsG0380015701.01.T01:CDS |
GTGCATGGCTTAGGAGCGAT+AGG | 0.582617 | 3:-73923264 | None:intergenic |
GTGAATCCTCTTTCACTGTA+GGG | 0.584545 | 3:-73923759 | None:intergenic |
AGAGTAGAGACGACGAGGAG+AGG | 0.588357 | 3:+73923613 | MsG0380015701.01.T01:CDS |
CCATGCTACCACATCGGAGA+AGG | 0.589985 | 3:+73923491 | MsG0380015701.01.T01:CDS |
TGAGAGTACAGTACGCGTAT+GGG | 0.590021 | 3:+73923790 | MsG0380015701.01.T01:CDS |
TTGGCTGAGGAAGGAAGTAG+AGG | 0.590328 | 3:-73923426 | None:intergenic |
AGCTTACGAAATGTCCAAAG+TGG | 0.592157 | 3:+73923218 | MsG0380015701.01.T01:intron |
GCTCTGGAATTCCAAATCAC+CGG | 0.593663 | 3:+73921112 | MsG0380015701.01.T01:CDS |
AAATCACCGGTTGAAACTAA+GGG | 0.599578 | 3:+73921125 | MsG0380015701.01.T01:CDS |
TCCAATCTCCACGCATCGCA+CGG | 0.601495 | 3:-73923828 | None:intergenic |
TGAAAGAGGATTCACGTGCA+GGG | 0.607088 | 3:+73923767 | MsG0380015701.01.T01:CDS |
GCAGCATGGAGATGAAGGCT+GGG | 0.611472 | 3:+73923578 | MsG0380015701.01.T01:CDS |
TGTCTGAGCTTCGAGAATCA+CGG | 0.611686 | 3:+73923468 | MsG0380015701.01.T01:CDS |
CGTACCATTACACAGTCCAT+TGG | 0.615150 | 3:-73921187 | None:intergenic |
TCTGGAGTTTCGGGAAGCAG+CGG | 0.617319 | 3:-73923402 | None:intergenic |
TTCTCGAAGCTCAGACACAC+CGG | 0.622372 | 3:-73923462 | None:intergenic |
GAGGAAAGTGAAACTGGAGA+AGG | 0.622774 | 3:+73923632 | MsG0380015701.01.T01:CDS |
AGTGCATATAGGGAAATGGT+GGG | 0.624526 | 3:+73923708 | MsG0380015701.01.T01:CDS |
ATGGAGATGAAGGCTGGGAG+TGG | 0.626519 | 3:+73923583 | MsG0380015701.01.T01:CDS |
CTAGAAAGGGAAACAACTCA+AGG | 0.628678 | 3:-73923895 | None:intergenic |
CACCGGTTGAAACTAAGGGT+GGG | 0.632213 | 3:+73921129 | MsG0380015701.01.T01:CDS |
TCACCGGTTGAAACTAAGGG+TGG | 0.636961 | 3:+73921128 | MsG0380015701.01.T01:CDS |
AAGATCCACCTTCTCCGATG+TGG | 0.639110 | 3:-73923499 | None:intergenic |
GCGTGGAGATTGGACTGTGG+TGG | 0.643557 | 3:+73923837 | MsG0380015701.01.T01:CDS |
GGGAGAGTCACCACCGCCGG+TGG | 0.643642 | 3:-73923381 | None:intergenic |
TGTCCGGGATTTATATCGGA+CGG | 0.666853 | 3:+73923660 | MsG0380015701.01.T01:CDS |
ACGGTTATGGGAGAGTGACG+TGG | 0.666874 | 3:+73923679 | MsG0380015701.01.T01:CDS |
ATTCTGATGTCCAAAGCGAG+TGG | 0.683392 | 3:+73921058 | MsG0380015701.01.T01:CDS |
AAAACAAACGGTGTAACCGT+CGG | 0.690022 | 3:+73923343 | MsG0380015701.01.T01:CDS |
TCACGGCCATGCTACCACAT+CGG | 0.701017 | 3:+73923485 | MsG0380015701.01.T01:CDS |
GATGAAGAGTAGAGACGACG+AGG | 0.704591 | 3:+73923608 | MsG0380015701.01.T01:CDS |
GTAACTGACACGTGGCAGCA+TGG | 0.705335 | 3:+73923564 | MsG0380015701.01.T01:CDS |
GTTATGGGAGAGTGACGTGG+AGG | 0.729117 | 3:+73923682 | MsG0380015701.01.T01:CDS |
TTGAATGCGTAACTGACACG+TGG | 0.739002 | 3:+73923556 | MsG0380015701.01.T01:CDS |
GGAGAAGGTGGATCTTACAG+CGG | 0.748589 | 3:+73923506 | MsG0380015701.01.T01:CDS |
GATGCGTGGAGATTGGACTG+TGG | 0.766424 | 3:+73923834 | MsG0380015701.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAAACAAATAACAAT+CGG | + | Chr3:73921843-73921862 | MsG0380015701.01.T01:intron | 10.0% |
!! | CAAAATTTGTAATAATAAAA+AGG | + | Chr3:73922642-73922661 | MsG0380015701.01.T01:intron | 10.0% |
!! | GTTATAATTTAAATTTGATA+TGG | - | Chr3:73922212-73922231 | None:intergenic | 10.0% |
!!! | AATGTAAATATTGTATTTTA+GGG | - | Chr3:73921804-73921823 | None:intergenic | 10.0% |
!!! | ATTTGTTTTAATTTGTTTTT+AGG | + | Chr3:73922456-73922475 | MsG0380015701.01.T01:intron | 10.0% |
!!! | TAATGTAAATATTGTATTTT+AGG | - | Chr3:73921805-73921824 | None:intergenic | 10.0% |
!! | ATTAACAAAATATTGAAATC+CGG | + | Chr3:73922851-73922870 | MsG0380015701.01.T01:intron | 15.0% |
!!! | AGTAAATATATATGTTTTGA+GGG | + | Chr3:73922326-73922345 | MsG0380015701.01.T01:intron | 15.0% |
!!! | TAGTAAATATATATGTTTTG+AGG | + | Chr3:73922325-73922344 | MsG0380015701.01.T01:intron | 15.0% |
!!! | TTTATTTTTTACAAAACCAA+TGG | - | Chr3:73921830-73921849 | None:intergenic | 15.0% |
!!! | TTTTCAAAAAGTATTATCAT+TGG | + | Chr3:73921570-73921589 | MsG0380015701.01.T01:intron | 15.0% |
!! | AAAGAATAACTTAAAAGGAA+AGG | - | Chr3:73923091-73923110 | None:intergenic | 20.0% |
!! | AATAATAATATACAGTACGT+CGG | + | Chr3:73922023-73922042 | MsG0380015701.01.T01:intron | 20.0% |
!! | AATGACAATAAATAAAAGTC+AGG | + | Chr3:73921378-73921397 | MsG0380015701.01.T01:intron | 20.0% |
!! | ATGACAATAAATAAAAGTCA+GGG | + | Chr3:73921379-73921398 | MsG0380015701.01.T01:intron | 20.0% |
!! | GAGAAAAAGAATAACTTAAA+AGG | - | Chr3:73923096-73923115 | None:intergenic | 20.0% |
!! | TTATCTTAAAGTTATATGTG+TGG | - | Chr3:73922234-73922253 | None:intergenic | 20.0% |
!!! | TACATTAAGTATTTTCTACT+AGG | - | Chr3:73922379-73922398 | None:intergenic | 20.0% |
!!! | TTTTTAGGAGAGAAAAAATA+GGG | + | Chr3:73922471-73922490 | MsG0380015701.01.T01:intron | 20.0% |
! | AAAATCACTCGAAAAACAAA+CGG | + | Chr3:73923331-73923350 | MsG0380015701.01.T01:CDS | 25.0% |
! | ACGTGTCAAAAAATTAAGAA+GGG | + | Chr3:73922535-73922554 | MsG0380015701.01.T01:intron | 25.0% |
! | AGGTGTGTATAATTATAGTT+TGG | - | Chr3:73921881-73921900 | None:intergenic | 25.0% |
! | ATCAATTAAAAGTCAATGGT+AGG | - | Chr3:73921730-73921749 | None:intergenic | 25.0% |
! | ATGAAGATAATAATGTTTGC+AGG | + | Chr3:73921518-73921537 | MsG0380015701.01.T01:intron | 25.0% |
! | CAATATTTACATTAGACCAT+TGG | + | Chr3:73921811-73921830 | MsG0380015701.01.T01:intron | 25.0% |
! | GGTGTGTATAATTATAGTTT+GGG | - | Chr3:73921880-73921899 | None:intergenic | 25.0% |
! | TGAAGATAATAATGTTTGCA+GGG | + | Chr3:73921519-73921538 | MsG0380015701.01.T01:intron | 25.0% |
!! | AAGGGATAAGATTGTATTTT+TGG | + | Chr3:73922553-73922572 | MsG0380015701.01.T01:intron | 25.0% |
!! | CACATAACGATTAAAGTATT+TGG | - | Chr3:73922131-73922150 | None:intergenic | 25.0% |
!! | TTCATAATGGAATTTCTCAA+TGG | + | Chr3:73921081-73921100 | MsG0380015701.01.T01:CDS | 25.0% |
!!! | GCAAACGTTAAATTTTTTAC+AGG | - | Chr3:73921901-73921920 | None:intergenic | 25.0% |
!!! | GTTTTTAGGAGAGAAAAAAT+AGG | + | Chr3:73922470-73922489 | MsG0380015701.01.T01:intron | 25.0% |
!!! | TTTTAGGAGAGAAAAAATAG+GGG | + | Chr3:73922472-73922491 | MsG0380015701.01.T01:intron | 25.0% |
AATCGTTATGTGCAATGTTT+AGG | + | Chr3:73922139-73922158 | MsG0380015701.01.T01:intron | 30.0% | |
AATTAAAAGTCAATGGTAGG+AGG | - | Chr3:73921727-73921746 | None:intergenic | 30.0% | |
CCATTTGATTGTTAAGCAAA+AGG | - | Chr3:73922764-73922783 | None:intergenic | 30.0% | |
GAATAACTTAAAAGGAAAGG+TGG | - | Chr3:73923088-73923107 | None:intergenic | 30.0% | |
GACGTGTCAAAAAATTAAGA+AGG | + | Chr3:73922534-73922553 | MsG0380015701.01.T01:intron | 30.0% | |
GTGCATCAATTAAAAGTCAA+TGG | - | Chr3:73921734-73921753 | None:intergenic | 30.0% | |
TAATTACAGGGAAATAAGGA+AGG | + | Chr3:73921256-73921275 | MsG0380015701.01.T01:intron | 30.0% | |
TAATTTCTTTGTAAGCGTAC+TGG | + | Chr3:73921666-73921685 | MsG0380015701.01.T01:intron | 30.0% | |
TAGAGAAATTATACGAAGAC+AGG | - | Chr3:73923122-73923141 | None:intergenic | 30.0% | |
TGGAATTTCTCAATGGTATT+AGG | + | Chr3:73921088-73921107 | MsG0380015701.01.T01:CDS | 30.0% | |
TTTAGGAGAGAAAAAATAGG+GGG | + | Chr3:73922473-73922492 | MsG0380015701.01.T01:intron | 30.0% | |
TTTCTTAGAGATGTTCACAT+AGG | - | Chr3:73922894-73922913 | None:intergenic | 30.0% | |
TTTGATTGTTAAGCAAAAGG+AGG | - | Chr3:73922761-73922780 | None:intergenic | 30.0% | |
! | AAGTATTTTCTACTAGGTAC+AGG | - | Chr3:73922373-73922392 | None:intergenic | 30.0% |
! | CCTTTTGCTTAACAATCAAA+TGG | + | Chr3:73922761-73922780 | MsG0380015701.01.T01:intron | 30.0% |
! | TCCTTATTTCCCTGTAATTA+CGG | - | Chr3:73921256-73921275 | None:intergenic | 30.0% |
! | TCTCAAGTTACTTCTAGAAA+AGG | + | Chr3:73921475-73921494 | MsG0380015701.01.T01:intron | 30.0% |
AAAAAGTCCGACCAAAAACT+CGG | + | Chr3:73922941-73922960 | MsG0380015701.01.T01:intron | 35.0% | |
AACGTTTGCATTCATAGACT+AGG | + | Chr3:73921912-73921931 | MsG0380015701.01.T01:intron | 35.0% | |
AAGTGGACAGAATCATGTTA+AGG | + | Chr3:73923235-73923254 | MsG0380015701.01.T01:CDS | 35.0% | |
ACCGTAATTACAGGGAAATA+AGG | + | Chr3:73921252-73921271 | MsG0380015701.01.T01:intron | 35.0% | |
AGAGATGTTCACATAGGAAA+GGG | - | Chr3:73922888-73922907 | None:intergenic | 35.0% | |
AGAGTCTCAACTAAATTCCA+TGG | - | Chr3:73923180-73923199 | None:intergenic | 35.0% | |
AGCCAAAAACACAAACAAAC+CGG | + | Chr3:73923443-73923462 | MsG0380015701.01.T01:CDS | 35.0% | |
ATGTTTCTCATCAGCATAAC+TGG | - | Chr3:73921159-73921178 | None:intergenic | 35.0% | |
CAAAAGGAAACACATAGAAC+CGG | - | Chr3:73922977-73922996 | None:intergenic | 35.0% | |
GAATAGTGCATATAGGGAAA+TGG | + | Chr3:73923704-73923723 | MsG0380015701.01.T01:CDS | 35.0% | |
GATTTATATCGGACGGTTAT+GGG | + | Chr3:73923667-73923686 | MsG0380015701.01.T01:CDS | 35.0% | |
GGTCAATCTTTATCTCAAGT+GGG | + | Chr3:73921400-73921419 | MsG0380015701.01.T01:intron | 35.0% | |
GTTGATGCAAAAGACACAAA+TGG | + | Chr3:73922498-73922517 | MsG0380015701.01.T01:intron | 35.0% | |
GTTGTGCATGAAGAGATAAA+AGG | - | Chr3:73923156-73923175 | None:intergenic | 35.0% | |
TAACATGATTCTGTCCACTT+TGG | - | Chr3:73923235-73923254 | None:intergenic | 35.0% | |
TAGAGATGTTCACATAGGAA+AGG | - | Chr3:73922889-73922908 | None:intergenic | 35.0% | |
! | AAATCACCGGTTGAAACTAA+GGG | + | Chr3:73921125-73921144 | MsG0380015701.01.T01:CDS | 35.0% |
! | ATTGCAAAACAAAGCGTCAA+TGG | - | Chr3:73921361-73921380 | None:intergenic | 35.0% |
!!! | GTGATTTTTTCTAGATCCGT+CGG | - | Chr3:73923319-73923338 | None:intergenic | 35.0% |
!!! | TGATTTTTTCTAGATCCGTC+GGG | - | Chr3:73923318-73923337 | None:intergenic | 35.0% |
!!! | TTTGTTTGTGTTTTTGGCTG+AGG | - | Chr3:73923442-73923461 | None:intergenic | 35.0% |
AAAACAAACGGTGTAACCGT+CGG | + | Chr3:73923343-73923362 | MsG0380015701.01.T01:CDS | 40.0% | |
AAAAGTCCGACCAAAAACTC+GGG | + | Chr3:73922942-73922961 | MsG0380015701.01.T01:intron | 40.0% | |
AGCTTACGAAATGTCCAAAG+TGG | + | Chr3:73923218-73923237 | MsG0380015701.01.T01:intron | 40.0% | |
AGTGCATATAGGGAAATGGT+GGG | + | Chr3:73923708-73923727 | MsG0380015701.01.T01:CDS | 40.0% | |
ATAGCTGCTACCGTAATTAC+AGG | + | Chr3:73921243-73921262 | MsG0380015701.01.T01:intron | 40.0% | |
ATGAATTTGAAGGGTAGTCC+TGG | - | Chr3:73921325-73921344 | None:intergenic | 40.0% | |
CTAGAAAGGGAAACAACTCA+AGG | - | Chr3:73923898-73923917 | None:intergenic | 40.0% | |
CTTAGTTTCAACCGGTGATT+TGG | - | Chr3:73921126-73921145 | None:intergenic | 40.0% | |
CTTTGGACATTTCGTAAGCT+AGG | - | Chr3:73923218-73923237 | None:intergenic | 40.0% | |
GAGATGTTCACATAGGAAAG+GGG | - | Chr3:73922887-73922906 | None:intergenic | 40.0% | |
GGATTTATATCGGACGGTTA+TGG | + | Chr3:73923666-73923685 | MsG0380015701.01.T01:CDS | 40.0% | |
GGGTCAATCTTTATCTCAAG+TGG | + | Chr3:73921399-73921418 | MsG0380015701.01.T01:intron | 40.0% | |
GTGAATCCTCTTTCACTGTA+GGG | - | Chr3:73923762-73923781 | None:intergenic | 40.0% | |
GTGGAGGAATAGTGCATATA+GGG | + | Chr3:73923698-73923717 | MsG0380015701.01.T01:CDS | 40.0% | |
TAAAAGGAAAGGTGGTGCAA+GGG | - | Chr3:73923080-73923099 | None:intergenic | 40.0% | |
TAACCGTCCGATATAAATCC+CGG | - | Chr3:73923666-73923685 | None:intergenic | 40.0% | |
TACCTGCGCATGAATTTGAA+GGG | - | Chr3:73921334-73921353 | None:intergenic | 40.0% | |
TAGCTGCTACCGTAATTACA+GGG | + | Chr3:73921244-73921263 | MsG0380015701.01.T01:intron | 40.0% | |
TAGTGCATATAGGGAAATGG+TGG | + | Chr3:73923707-73923726 | MsG0380015701.01.T01:CDS | 40.0% | |
TAGTTGTCCATGCATGAACA+CGG | - | Chr3:73921443-73921462 | None:intergenic | 40.0% | |
TTAAAAGGAAAGGTGGTGCA+AGG | - | Chr3:73923081-73923100 | None:intergenic | 40.0% | |
TTACCTGCGCATGAATTTGA+AGG | - | Chr3:73921335-73921354 | None:intergenic | 40.0% | |
! | AAGGACAAGTTTGGTTGGTT+AGG | + | Chr3:73923733-73923752 | MsG0380015701.01.T01:CDS | 40.0% |
! | AAGTAGAGGATCTGGAGTTT+CGG | - | Chr3:73923415-73923434 | None:intergenic | 40.0% |
! | AGGACAAGTTTGGTTGGTTA+GGG | + | Chr3:73923734-73923753 | MsG0380015701.01.T01:CDS | 40.0% |
! | CAAATCACCGGTTGAAACTA+AGG | + | Chr3:73921124-73921143 | MsG0380015701.01.T01:CDS | 40.0% |
! | CTTGAGTTGTTTCCCTTTCT+AGG | + | Chr3:73923896-73923915 | MsG0380015701.01.T01:CDS | 40.0% |
! | GCAAAGGGAAGTATGTCAAA+AGG | - | Chr3:73922993-73923012 | None:intergenic | 40.0% |
!! | ACATAGGAAAGGGGTTTTGT+TGG | - | Chr3:73922878-73922897 | None:intergenic | 40.0% |
!!! | CACCGGTTTGTTTGTGTTTT+TGG | - | Chr3:73923448-73923467 | None:intergenic | 40.0% |
!!! | TTTGTGTTTTTGGCTGAGGA+AGG | - | Chr3:73923438-73923457 | None:intergenic | 40.0% |
!!! | TTTTGAAAAAGCGTCGACGT+CGG | - | Chr3:73923295-73923314 | None:intergenic | 40.0% |
AAAACTCGGGTTCACAGTTC+CGG | + | Chr3:73922955-73922974 | MsG0380015701.01.T01:intron | 45.0% | |
AGAAACATCGATCAGGCCAA+TGG | + | Chr3:73921171-73921190 | MsG0380015701.01.T01:CDS | 45.0% | |
AGGCTGACAGTTACACATCT+AGG | + | Chr3:73921210-73921229 | MsG0380015701.01.T01:intron | 45.0% | |
AGTTGTCCATGCATGAACAC+GGG | - | Chr3:73921442-73921461 | None:intergenic | 45.0% | |
ATCCCACCCTTAGTTTCAAC+CGG | - | Chr3:73921134-73921153 | None:intergenic | 45.0% | |
ATTCTGATGTCCAAAGCGAG+TGG | + | Chr3:73921058-73921077 | MsG0380015701.01.T01:CDS | 45.0% | |
CACGTGTCCGGGATTTATAT+CGG | + | Chr3:73923656-73923675 | MsG0380015701.01.T01:CDS | 45.0% | |
CATAAACCCGTGTTCATGCA+TGG | + | Chr3:73921433-73921452 | MsG0380015701.01.T01:intron | 45.0% | |
CATCCTGGGAATAAATACCC+TGG | - | Chr3:73921284-73921303 | None:intergenic | 45.0% | |
CCAAAGCGAGTGGTTCATAA+TGG | + | Chr3:73921068-73921087 | MsG0380015701.01.T01:CDS | 45.0% | |
CCATTATGAACCACTCGCTT+TGG | - | Chr3:73921071-73921090 | None:intergenic | 45.0% | |
CGTACCATTACACAGTCCAT+TGG | - | Chr3:73921190-73921209 | None:intergenic | 45.0% | |
CGTGAATCCTCTTTCACTGT+AGG | - | Chr3:73923763-73923782 | None:intergenic | 45.0% | |
CGTGGAGGAATAGTGCATAT+AGG | + | Chr3:73923697-73923716 | MsG0380015701.01.T01:CDS | 45.0% | |
CTCAATGGTATTAGGAGCTC+TGG | + | Chr3:73921096-73921115 | MsG0380015701.01.T01:CDS | 45.0% | |
CTTCTTATTCCGAGTGATCC+AGG | + | Chr3:73921304-73921323 | MsG0380015701.01.T01:intron | 45.0% | |
GAGGAAAGTGAAACTGGAGA+AGG | + | Chr3:73923632-73923651 | MsG0380015701.01.T01:CDS | 45.0% | |
GCTGATGAGAAACATCGATC+AGG | + | Chr3:73921164-73921183 | MsG0380015701.01.T01:CDS | 45.0% | |
GGCTGACAGTTACACATCTA+GGG | + | Chr3:73921211-73921230 | MsG0380015701.01.T01:intron | 45.0% | |
TACCCTTCAAATTCATGCGC+AGG | + | Chr3:73921329-73921348 | MsG0380015701.01.T01:intron | 45.0% | |
TCTCTTCATGCACAACACCA+TGG | + | Chr3:73923160-73923179 | MsG0380015701.01.T01:intron | 45.0% | |
TGAAAGAGGATTCACGTGCA+GGG | + | Chr3:73923767-73923786 | MsG0380015701.01.T01:CDS | 45.0% | |
TGAGATAAACACGTGCGACA+GGG | - | Chr3:73923025-73923044 | None:intergenic | 45.0% | |
TGCAAGGGAGAAGAGATAGA+TGG | - | Chr3:73923065-73923084 | None:intergenic | 45.0% | |
TGTCCGGGATTTATATCGGA+CGG | + | Chr3:73923660-73923679 | MsG0380015701.01.T01:CDS | 45.0% | |
TGTCTGAGCTTCGAGAATCA+CGG | + | Chr3:73923468-73923487 | MsG0380015701.01.T01:CDS | 45.0% | |
TTATTTCCCCGTGCTTGACA+CGG | + | Chr3:73922292-73922311 | MsG0380015701.01.T01:intron | 45.0% | |
TTGAATGCGTAACTGACACG+TGG | + | Chr3:73923556-73923575 | MsG0380015701.01.T01:CDS | 45.0% | |
! | AGTAGAGGATCTGGAGTTTC+GGG | - | Chr3:73923414-73923433 | None:intergenic | 45.0% |
! | ATGGACTGTGTAATGGTACG+AGG | + | Chr3:73921190-73921209 | MsG0380015701.01.T01:intron | 45.0% |
! | GAACTGTGAACCCGAGTTTT+TGG | - | Chr3:73922955-73922974 | None:intergenic | 45.0% |
! | GTAAGCGTACTGGTCATTAC+AGG | + | Chr3:73921676-73921695 | MsG0380015701.01.T01:intron | 45.0% |
! | GTACCAGGGTATTTATTCCC+AGG | + | Chr3:73921278-73921297 | MsG0380015701.01.T01:intron | 45.0% |
! | TGAGAGTACAGTACGCGTAT+GGG | + | Chr3:73923790-73923809 | MsG0380015701.01.T01:CDS | 45.0% |
!! | ACTCGGAATAAGAAGCATCC+TGG | - | Chr3:73921299-73921318 | None:intergenic | 45.0% |
!! | AGGGAAATAAGGAAGGTACC+AGG | + | Chr3:73921263-73921282 | MsG0380015701.01.T01:intron | 45.0% |
!! | CTCGGAATAAGAAGCATCCT+GGG | - | Chr3:73921298-73921317 | None:intergenic | 45.0% |
!! | GCTCTGGAATTCCAAATCAC+CGG | + | Chr3:73921112-73921131 | MsG0380015701.01.T01:CDS | 45.0% |
!! | GGGAAATAAGGAAGGTACCA+GGG | + | Chr3:73921264-73921283 | MsG0380015701.01.T01:intron | 45.0% |
!! | TATAGGGAAATGGTGGGTGA+AGG | + | Chr3:73923714-73923733 | MsG0380015701.01.T01:CDS | 45.0% |
!!! | GACGCTTTTTCAAAACCCGA+CGG | + | Chr3:73923300-73923319 | MsG0380015701.01.T01:CDS | 45.0% |
!!! | TGTGAACCCGAGTTTTTGGT+CGG | - | Chr3:73922951-73922970 | None:intergenic | 45.0% |
AAGATCCACCTTCTCCGATG+TGG | - | Chr3:73923502-73923521 | None:intergenic | 50.0% | |
AAGGGTAGTCCTGGATCACT+CGG | - | Chr3:73921316-73921335 | None:intergenic | 50.0% | |
AAGGTGGATCTTACAGCGGT+AGG | + | Chr3:73923510-73923529 | MsG0380015701.01.T01:CDS | 50.0% | |
AGGTGGATCTTACAGCGGTA+GGG | + | Chr3:73923511-73923530 | MsG0380015701.01.T01:CDS | 50.0% | |
ATAGTGACCCGTGTCAAGCA+CGG | - | Chr3:73922303-73922322 | None:intergenic | 50.0% | |
CGAGGAGAGGAAAGTGAAAC+TGG | + | Chr3:73923626-73923645 | MsG0380015701.01.T01:CDS | 50.0% | |
GAGAAAAACTGTCCCTCCAC+CGG | + | Chr3:73923365-73923384 | MsG0380015701.01.T01:CDS | 50.0% | |
GAGGAAGGAAGTAGAGGATC+TGG | - | Chr3:73923423-73923442 | None:intergenic | 50.0% | |
GATCTTACAGCGGTAGGGTT+AGG | + | Chr3:73923516-73923535 | MsG0380015701.01.T01:CDS | 50.0% | |
GATGAAGAGTAGAGACGACG+AGG | + | Chr3:73923608-73923627 | MsG0380015701.01.T01:CDS | 50.0% | |
GGAGAAGGTGGATCTTACAG+CGG | + | Chr3:73923506-73923525 | MsG0380015701.01.T01:CDS | 50.0% | |
GGGTGAAGGACAAGTTTGGT+TGG | + | Chr3:73923728-73923747 | MsG0380015701.01.T01:CDS | 50.0% | |
GTGAAAGAGGATTCACGTGC+AGG | + | Chr3:73923766-73923785 | MsG0380015701.01.T01:CDS | 50.0% | |
GTGAGATAAACACGTGCGAC+AGG | - | Chr3:73923026-73923045 | None:intergenic | 50.0% | |
TATTTCCCCGTGCTTGACAC+GGG | + | Chr3:73922293-73922312 | MsG0380015701.01.T01:intron | 50.0% | |
TTCTCGAAGCTCAGACACAC+CGG | - | Chr3:73923465-73923484 | None:intergenic | 50.0% | |
TTGGCTGAGGAAGGAAGTAG+AGG | - | Chr3:73923429-73923448 | None:intergenic | 50.0% | |
! | AGGGTACCCTACAGTGAAAG+AGG | + | Chr3:73923753-73923772 | MsG0380015701.01.T01:CDS | 50.0% |
! | CACCGGTTGAAACTAAGGGT+GGG | + | Chr3:73921129-73921148 | MsG0380015701.01.T01:CDS | 50.0% |
! | GAGGGACAGTTTTTCTCCGA+CGG | - | Chr3:73923362-73923381 | None:intergenic | 50.0% |
! | GTGAGAGTACAGTACGCGTA+TGG | + | Chr3:73923789-73923808 | MsG0380015701.01.T01:CDS | 50.0% |
! | TCACCGGTTGAAACTAAGGG+TGG | + | Chr3:73921128-73921147 | MsG0380015701.01.T01:CDS | 50.0% |
! | TGGTGGGTGAAGGACAAGTT+TGG | + | Chr3:73923724-73923743 | MsG0380015701.01.T01:CDS | 50.0% |
!! | CAGGCCAATGGACTGTGTAA+TGG | + | Chr3:73921183-73921202 | MsG0380015701.01.T01:CDS | 50.0% |
!! | TGGACTGTGGTGGTTTTGCA+TGG | + | Chr3:73923847-73923866 | MsG0380015701.01.T01:CDS | 50.0% |
!!! | GGAAAGGGGTTTTGTTGGAC+CGG | - | Chr3:73922873-73922892 | None:intergenic | 50.0% |
AAAAACTGTCCCTCCACCGG+CGG | + | Chr3:73923368-73923387 | MsG0380015701.01.T01:CDS | 55.0% | |
ACGGTTATGGGAGAGTGACG+TGG | + | Chr3:73923679-73923698 | MsG0380015701.01.T01:CDS | 55.0% | |
ACGTGGCAGCATGGAGATGA+AGG | + | Chr3:73923573-73923592 | MsG0380015701.01.T01:CDS | 55.0% | |
ACTGGAGAAGGACACGTGTC+CGG | + | Chr3:73923644-73923663 | MsG0380015701.01.T01:CDS | 55.0% | |
AGAGTAGAGACGACGAGGAG+AGG | + | Chr3:73923613-73923632 | MsG0380015701.01.T01:CDS | 55.0% | |
ATGGAGATGAAGGCTGGGAG+TGG | + | Chr3:73923583-73923602 | MsG0380015701.01.T01:CDS | 55.0% | |
CCATGCTACCACATCGGAGA+AGG | + | Chr3:73923491-73923510 | MsG0380015701.01.T01:CDS | 55.0% | |
CCTTCTCCGATGTGGTAGCA+TGG | - | Chr3:73923494-73923513 | None:intergenic | 55.0% | |
CTTACAGCGGTAGGGTTAGG+AGG | + | Chr3:73923519-73923538 | MsG0380015701.01.T01:CDS | 55.0% | |
GATGCGTGGAGATTGGACTG+TGG | + | Chr3:73923834-73923853 | MsG0380015701.01.T01:CDS | 55.0% | |
GCAGCATGGAGATGAAGGCT+GGG | + | Chr3:73923578-73923597 | MsG0380015701.01.T01:CDS | 55.0% | |
GTAACTGACACGTGGCAGCA+TGG | + | Chr3:73923564-73923583 | MsG0380015701.01.T01:CDS | 55.0% | |
GTGCATGGCTTAGGAGCGAT+AGG | - | Chr3:73923267-73923286 | None:intergenic | 55.0% | |
GTTATGGGAGAGTGACGTGG+AGG | + | Chr3:73923682-73923701 | MsG0380015701.01.T01:CDS | 55.0% | |
TAGTGACCCGTGTCAAGCAC+GGG | - | Chr3:73922302-73922321 | None:intergenic | 55.0% | |
TCACGGCCATGCTACCACAT+CGG | + | Chr3:73923485-73923504 | MsG0380015701.01.T01:CDS | 55.0% | |
TCCAATCTCCACGCATCGCA+CGG | - | Chr3:73923831-73923850 | None:intergenic | 55.0% | |
TGCTACCACATCGGAGAAGG+TGG | + | Chr3:73923494-73923513 | MsG0380015701.01.T01:CDS | 55.0% | |
! | TCTGGAGTTTCGGGAAGCAG+CGG | - | Chr3:73923405-73923424 | None:intergenic | 55.0% |
!! | TGAAAAAGCGTCGACGTCGG+AGG | - | Chr3:73923292-73923311 | None:intergenic | 55.0% |
ACAGGGCTACGTGGCGCAAA+GGG | - | Chr3:73923008-73923027 | None:intergenic | 60.0% | |
AGTGACCCGTGTCAAGCACG+GGG | - | Chr3:73922301-73922320 | None:intergenic | 60.0% | |
CTGGAGAAGGACACGTGTCC+GGG | + | Chr3:73923645-73923664 | MsG0380015701.01.T01:CDS | 60.0% | |
CTGGAGTTTCGGGAAGCAGC+GGG | - | Chr3:73923404-73923423 | None:intergenic | 60.0% | |
GCGTGGAGATTGGACTGTGG+TGG | + | Chr3:73923837-73923856 | MsG0380015701.01.T01:CDS | 60.0% | |
GGCAGCATGGAGATGAAGGC+TGG | + | Chr3:73923577-73923596 | MsG0380015701.01.T01:CDS | 60.0% | |
!! | AAAAGCGTCGACGTCGGAGG+CGG | - | Chr3:73923289-73923308 | None:intergenic | 60.0% |
ACACGTGCGACAGGGCTACG+TGG | - | Chr3:73923017-73923036 | None:intergenic | 65.0% | |
GACAGGGCTACGTGGCGCAA+AGG | - | Chr3:73923009-73923028 | None:intergenic | 65.0% | |
GCCGTGCGATGCGTGGAGAT+TGG | + | Chr3:73923827-73923846 | MsG0380015701.01.T01:CDS | 65.0% | |
TCGGAGGCGGTGCATGGCTT+AGG | - | Chr3:73923276-73923295 | None:intergenic | 65.0% | |
!! | GAAGAGTGCCGTGCGATGCG+TGG | + | Chr3:73923820-73923839 | MsG0380015701.01.T01:CDS | 65.0% |
AACTGTCCCTCCACCGGCGG+TGG | + | Chr3:73923371-73923390 | MsG0380015701.01.T01:CDS | 70.0% | |
AGAGTCACCACCGCCGGTGG+AGG | - | Chr3:73923381-73923400 | None:intergenic | 70.0% | |
AGCGGGAGAGTCACCACCGC+CGG | - | Chr3:73923387-73923406 | None:intergenic | 70.0% | |
GAGTCACCACCGCCGGTGGA+GGG | - | Chr3:73923380-73923399 | None:intergenic | 70.0% | |
TCGACGTCGGAGGCGGTGCA+TGG | - | Chr3:73923282-73923301 | None:intergenic | 70.0% | |
GGGAGAGTCACCACCGCCGG+TGG | - | Chr3:73923384-73923403 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 73921054 | 73923917 | 73921054 | ID=MsG0380015701.01;Name=MsG0380015701.01 |
Chr3 | mRNA | 73921054 | 73923917 | 73921054 | ID=MsG0380015701.01.T01;Parent=MsG0380015701.01;Name=MsG0380015701.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|0|0|2|0|282 |
Chr3 | exon | 73921054 | 73921204 | 73921054 | ID=MsG0380015701.01.T01:exon:868;Parent=MsG0380015701.01.T01 |
Chr3 | exon | 73923220 | 73923917 | 73923220 | ID=MsG0380015701.01.T01:exon:869;Parent=MsG0380015701.01.T01 |
Chr3 | CDS | 73921054 | 73921204 | 73921054 | ID=MsG0380015701.01.T01:cds;Parent=MsG0380015701.01.T01 |
Chr3 | CDS | 73923220 | 73923917 | 73923220 | ID=MsG0380015701.01.T01:cds;Parent=MsG0380015701.01.T01 |
Gene Sequence |
Protein sequence |