AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000982.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000982.01.T01 MTR_1g028310 85.316 395 10 2 1 371 2 372 0.0 680
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000982.01.T01 AT3G20740 61.954 389 100 2 1 365 1 365 0.0 513

Find 109 sgRNAs with CRISPR-Local

Find 335 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGTTATTGTAGATTTC+TGG 0.029475 1:+14064604 MsG0180000982.01.T01:intron
AACATGAGCTTTCTGGTTTA+TGG 0.075717 1:+14066240 MsG0180000982.01.T01:three_prime_UTR
GTAATCCAACATGAGCTTTC+TGG 0.165686 1:+14066233 MsG0180000982.01.T01:three_prime_UTR
CTGCTTGCCGTTTGCCGATT+TGG 0.191328 1:-14061538 None:intergenic
AGAAATGAAGTTGTTTAGTT+TGG 0.226754 1:+14062972 MsG0180000982.01.T01:exon
GGAGATTGTTCCTTCACTTT+TGG 0.304329 1:-14065409 None:intergenic
TCATGTTATTGTAGATTTCT+GGG 0.306164 1:+14064605 MsG0180000982.01.T01:intron
GGGGCTCCGCTTGCTGTGGC+TGG 0.309712 1:+14063548 MsG0180000982.01.T01:CDS
GGTATAATTCGAGTCATTAA+TGG 0.331826 1:+14063581 MsG0180000982.01.T01:CDS
CATTTCAAGGCATGTGCAAT+AGG 0.337992 1:+14065601 MsG0180000982.01.T01:CDS
TCGCCACAGTTGGTGGCAAT+CGG 0.340184 1:+14063130 MsG0180000982.01.T01:CDS
CTGTTCCCGAATGTGATATA+TGG 0.347442 1:+14065554 MsG0180000982.01.T01:CDS
GAAATGAAGTTGTTTAGTTT+GGG 0.348766 1:+14062973 MsG0180000982.01.T01:exon
GACAGAGCAGTTTGCCTGAT+TGG 0.353858 1:-14066002 None:intergenic
TTCTTGTGATTTCCATTTCA+AGG 0.357319 1:+14065588 MsG0180000982.01.T01:CDS
TTGCCGATTTGGATTTGTTT+TGG 0.365592 1:-14061527 None:intergenic
AGGATGAGTCGGTTCGGTTA+TGG 0.369014 1:+14063941 MsG0180000982.01.T01:CDS
CATATATCACATTCGGGAAC+AGG 0.382978 1:-14065553 None:intergenic
ATAGAGGACGCTTGCCCTCT+TGG 0.383210 1:-14063062 None:intergenic
GTTGATTGTACTAGATGGTT+GGG 0.389994 1:+14064806 MsG0180000982.01.T01:CDS
ATTACGTTGATTGTACTAGA+TGG 0.390980 1:+14064801 MsG0180000982.01.T01:CDS
GATGAACCATATATCACATT+CGG 0.393972 1:-14065560 None:intergenic
CTATTGCACATGCCTTGAAA+TGG 0.404472 1:-14065600 None:intergenic
ACTCAACTATAAGATATATC+AGG 0.408714 1:-14064288 None:intergenic
GTCGGCTGCTATTATTCCAT+TGG 0.414779 1:+14064251 MsG0180000982.01.T01:CDS
CTCAATCAAAATCTCCAATC+AGG 0.426061 1:+14065988 MsG0180000982.01.T01:CDS
AGTATTATCCATGCCACAAC+TGG 0.426956 1:-14064187 None:intergenic
CAGCAATAACTCCTCCTTGA+AGG 0.427134 1:-14063273 None:intergenic
GTTCCCACAAGACAATTTCA+TGG 0.428181 1:-14065387 None:intergenic
CGCCACAGTTGGTGGCAATC+GGG 0.433391 1:+14063131 MsG0180000982.01.T01:CDS
ACTAACTTTGCAATAAGAAT+AGG 0.443448 1:-14065886 None:intergenic
CTTGCCCTCTTGGAGGCGAT+TGG 0.444725 1:-14063052 None:intergenic
TGGATAATACTGTTAAGATA+TGG 0.449910 1:+14064199 MsG0180000982.01.T01:CDS
ATGAACCATATATCACATTC+GGG 0.452653 1:-14065559 None:intergenic
ACTATTTATCAATGCCTTCA+AGG 0.459450 1:+14063259 MsG0180000982.01.T01:CDS
CACAGCAAGCGGAGCCCCAT+TGG 0.459961 1:-14063543 None:intergenic
AAAAGTGAAGGAACAATCTC+CGG 0.462918 1:+14065411 MsG0180000982.01.T01:CDS
CATCAAAATAAGTTAAGCTT+CGG 0.467093 1:-14066181 None:intergenic
AAAGAGAGTGAGCAAGAAAA+CGG 0.468078 1:+14061576 MsG0180000982.01.T01:five_prime_UTR
CGTTGATTGTACTAGATGGT+TGG 0.469880 1:+14064805 MsG0180000982.01.T01:CDS
AAAGTGAAGGAACAATCTCC+GGG 0.472235 1:+14065412 MsG0180000982.01.T01:CDS
TCGGTAACTTGAATTCTTCA+AGG 0.477006 1:+14063010 MsG0180000982.01.T01:CDS
TTTATGGATTTGACTAGTCA+TGG 0.486081 1:+14066256 MsG0180000982.01.T01:three_prime_UTR
GCTGGGCATGCAATACCAAT+GGG 0.490406 1:+14063528 MsG0180000982.01.T01:CDS
CATGTTATTGTAGATTTCTG+GGG 0.490488 1:+14064606 MsG0180000982.01.T01:intron
GCTGTGGCTGGAGGAGTCAA+TGG 0.492947 1:+14063560 MsG0180000982.01.T01:CDS
GAAGAAATCACCTTCCATCA+TGG 0.495754 1:-14066025 None:intergenic
ACACCAAAACAAATCCAAAT+CGG 0.497077 1:+14061524 MsG0180000982.01.T01:five_prime_UTR
TGTTAAGATATGGTCTATGA+AGG 0.499381 1:+14064209 MsG0180000982.01.T01:CDS
AACAATTCTTCAGTCGGAAG+TGG 0.500859 1:+14062898 MsG0180000982.01.T01:five_prime_UTR
AACAAATCCAAATCGGCAAA+CGG 0.504657 1:+14061531 MsG0180000982.01.T01:five_prime_UTR
GGCGAAAACGTTGAAGTAGC+GGG 0.515363 1:-14063112 None:intergenic
CTGCATATTTCAAAACAAGT+TGG 0.522950 1:+14062944 MsG0180000982.01.T01:five_prime_UTR
GCTCCGCTTGCTGTGGCTGG+AGG 0.526253 1:+14063551 MsG0180000982.01.T01:CDS
TTGATTGTACTAGATGGTTG+GGG 0.530596 1:+14064807 MsG0180000982.01.T01:CDS
GCAATCTTAAATATATCTGA+TGG 0.530601 1:-14064165 None:intergenic
GCTGCGACGATGGAACAATA+TGG 0.532008 1:+14066139 MsG0180000982.01.T01:CDS
CAAACTGCTCTGTCCCATGA+TGG 0.534574 1:+14066011 MsG0180000982.01.T01:CDS
ACGATGGAACAATATGGCGC+TGG 0.535341 1:+14066145 MsG0180000982.01.T01:CDS
TGACCATGAAATTGTCTTGT+GGG 0.535677 1:+14065384 MsG0180000982.01.T01:CDS
AAGAAATCACCTTCCATCAT+GGG 0.537640 1:-14066024 None:intergenic
CAATACTTAAGACTTCATTA+CGG 0.539217 1:-14064014 None:intergenic
GAATTCAAGTTACCGACCAC+TGG 0.540698 1:-14063003 None:intergenic
AGCTGGGCATGCAATACCAA+TGG 0.542122 1:+14063527 MsG0180000982.01.T01:CDS
ATCTGCCAGGCAACAGGGAA+GGG 0.543112 1:+14065830 MsG0180000982.01.T01:intron
TTGAAAACAACAGCATATAG+AGG 0.543815 1:-14063078 None:intergenic
GAGGACGCTTGCCCTCTTGG+AGG 0.553105 1:-14063059 None:intergenic
ACTCCTCCAGCCACAGCAAG+CGG 0.555533 1:-14063554 None:intergenic
ATAACCGAACCGACTCATCC+TGG 0.555826 1:-14063939 None:intergenic
TTGACCAGGATGAGTCGGTT+CGG 0.559065 1:+14063935 MsG0180000982.01.T01:CDS
TAAGATTGCCAGTTGTGGCA+TGG 0.560210 1:+14064179 MsG0180000982.01.T01:CDS
ATCGCAAACAAATCGCAAGC+AGG 0.560293 1:+14061610 MsG0180000982.01.T01:five_prime_UTR
TAGTCATGGACACGAGAACC+TGG 0.561216 1:+14066270 MsG0180000982.01.T01:three_prime_UTR
AACTTTGCAATAAGAATAGG+AGG 0.567634 1:-14065883 None:intergenic
ATATTTAAGATTGCCAGTTG+TGG 0.568569 1:+14064174 MsG0180000982.01.T01:CDS
CAATGGGGCTCCGCTTGCTG+TGG 0.568999 1:+14063544 MsG0180000982.01.T01:CDS
CGATGGAACAATATGGCGCT+GGG 0.574058 1:+14066146 MsG0180000982.01.T01:CDS
TTGATATTTGCTGGAGCTGG+AGG 0.577096 1:+14063988 MsG0180000982.01.T01:CDS
GATCTGCCAGGCAACAGGGA+AGG 0.581341 1:+14065829 MsG0180000982.01.T01:intron
GTTAAGATATGGTCTATGAA+GGG 0.585488 1:+14064210 MsG0180000982.01.T01:CDS
TAGTTCTAACTAACCTCCCC+CGG 0.588824 1:-14065430 None:intergenic
GACAACAACAATTCTTCAGT+CGG 0.592058 1:+14062892 MsG0180000982.01.T01:five_prime_UTR
GGATAAACAAAAGCAACCAA+TGG 0.594413 1:-14064267 None:intergenic
AACCCGATTGCCACCAACTG+TGG 0.596131 1:-14063133 None:intergenic
GTCACCAATCGCCTCCAAGA+GGG 0.603232 1:+14063048 MsG0180000982.01.T01:CDS
CTGCTCTGTCCCATGATGGA+AGG 0.609716 1:+14066015 MsG0180000982.01.T01:CDS
TGGCGAAAACGTTGAAGTAG+CGG 0.611387 1:-14063113 None:intergenic
AGTTTAGTCGATCTATTGTG+TGG 0.611877 1:+14066300 MsG0180000982.01.T01:three_prime_UTR
TAAGGTTGACCAGGATGAGT+CGG 0.612307 1:+14063930 MsG0180000982.01.T01:intron
TTTGGATCTGCCAGGCAACA+GGG 0.620012 1:+14065825 MsG0180000982.01.T01:intron
TTGACCATGAAATTGTCTTG+TGG 0.623303 1:+14065383 MsG0180000982.01.T01:CDS
CTTGTGGGAACCAAAAGTGA+AGG 0.642680 1:+14065399 MsG0180000982.01.T01:CDS
ATGTAGAACAATCATTCACA+TGG 0.644945 1:+14064631 MsG0180000982.01.T01:CDS
TAGTTTGGGAACTGAACCAG+TGG 0.645204 1:+14062987 MsG0180000982.01.T01:CDS
ATAAACCAGAAAGCTCATGT+TGG 0.646011 1:-14066238 None:intergenic
ATATATCACATTCGGGAACA+GGG 0.646091 1:-14065552 None:intergenic
CGGTTATGGAATGTTCACAC+TGG 0.649169 1:+14063955 MsG0180000982.01.T01:CDS
AGCAAACACTCACCTTTGAG+AGG 0.649424 1:-14064838 None:intergenic
AATAACTTATAAGGTTGACC+AGG 0.657705 1:+14063921 MsG0180000982.01.T01:intron
TCGACTAAACTCGATAAACC+AGG 0.661196 1:-14066288 None:intergenic
TTGGGAACTGAACCAGTGGT+CGG 0.669095 1:+14062991 MsG0180000982.01.T01:CDS
GATATGGTCTATGAAGGGTG+AGG 0.671249 1:+14064215 MsG0180000982.01.T01:CDS
TGATTGTACTAGATGGTTGG+GGG 0.686806 1:+14064808 MsG0180000982.01.T01:CDS
ATTTATCAATGCCTTCAAGG+AGG 0.700895 1:+14063262 MsG0180000982.01.T01:CDS
AGTCACCAATCGCCTCCAAG+AGG 0.702657 1:+14063047 MsG0180000982.01.T01:CDS
AAGTGAAGGAACAATCTCCG+GGG 0.721249 1:+14065413 MsG0180000982.01.T01:CDS
AGTGAAGGAACAATCTCCGG+GGG 0.721831 1:+14065414 MsG0180000982.01.T01:CDS
TAGCGATGAGAAGTTACACA+AGG 0.725107 1:+14063604 MsG0180000982.01.T01:CDS
CTGGGCATGCAATACCAATG+GGG 0.727775 1:+14063529 MsG0180000982.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTATTAAAAAAA+AGG + Chr1:14063439-14063458 MsG0180000982.01.T01:intron 0.0%
!! AATCAAAACAAATTAATTTA+AGG - Chr1:14063693-14063712 None:intergenic 10.0%
!! TTTGATTCAATAATATTTAA+AGG + Chr1:14063706-14063725 MsG0180000982.01.T01:intron 10.0%
!!! ACTTTTAATTATTTTATTGA+AGG - Chr1:14065237-14065256 None:intergenic 10.0%
!!! ATTTTACAAATTTATACTTT+TGG - Chr1:14064452-14064471 None:intergenic 10.0%
!!! CTTTTAATTATTTTATTGAA+GGG - Chr1:14065236-14065255 None:intergenic 10.0%
!! AAACTATAAGATAAACTATT+AGG + Chr1:14062244-14062263 MsG0180000982.01.T01:intron 15.0%
!! ATTAAAAGTAATTCAATAGT+TGG + Chr1:14065248-14065267 MsG0180000982.01.T01:intron 15.0%
!! TATTAAAACATGTAAAATAC+CGG + Chr1:14062732-14062751 MsG0180000982.01.T01:intron 15.0%
!! TTTAATAAACTCAACATAAA+TGG - Chr1:14062719-14062738 None:intergenic 15.0%
!!! AAATTTGTTTTTAACTATGA+AGG + Chr1:14064507-14064526 MsG0180000982.01.T01:intron 15.0%
!!! AACAAATTTTGATCATTTTT+TGG + Chr1:14065072-14065091 MsG0180000982.01.T01:intron 15.0%
!!! AATTCTAATTAATCTTTTGT+TGG + Chr1:14065748-14065767 MsG0180000982.01.T01:intron 15.0%
!!! AATTTGTTTTTAACTATGAA+GGG + Chr1:14064508-14064527 MsG0180000982.01.T01:intron 15.0%
!!! ATAAGCAATCATAATATTTT+TGG - Chr1:14064403-14064422 None:intergenic 15.0%
!!! ATTTTGCATTTTTGTTTATT+TGG + Chr1:14063356-14063375 MsG0180000982.01.T01:intron 15.0%
!!! TAAGCAATCATAATATTTTT+GGG - Chr1:14064402-14064421 None:intergenic 15.0%
!!! TTTTCATACAATAACTTATA+AGG + Chr1:14063912-14063931 MsG0180000982.01.T01:intron 15.0%
!!! TTTTCTAAATATTGTGTTAT+TGG + Chr1:14065908-14065927 MsG0180000982.01.T01:intron 15.0%
!! AATGAAAAAGACAATACATT+AGG - Chr1:14064568-14064587 None:intergenic 20.0%
!! AATTAAATCAAAGCGAATTT+CGG - Chr1:14062542-14062561 None:intergenic 20.0%
!! ACGTCAAATTATTAAATCAT+TGG - Chr1:14062832-14062851 None:intergenic 20.0%
!! ATTAAAAAAAAGGAACAAAG+TGG + Chr1:14063449-14063468 MsG0180000982.01.T01:intron 20.0%
!! CATAATTCATAAACCATATT+TGG - Chr1:14062297-14062316 None:intergenic 20.0%
!! CTTTGATTATTACCATAATT+TGG - Chr1:14064088-14064107 None:intergenic 20.0%
!! TAGAAAAGATGGTAAAAAAT+AGG + Chr1:14062115-14062134 MsG0180000982.01.T01:intron 20.0%
!! TCCAAAAGGAAAAAAAAAAA+CGG - Chr1:14065811-14065830 None:intergenic 20.0%
!! TGAATATCTGAAAATGAAAT+TGG - Chr1:14064763-14064782 None:intergenic 20.0%
!! TGAATGGAAAAAATAGAAAA+AGG - Chr1:14063164-14063183 None:intergenic 20.0%
!! TGAATTATGATTGAACATTA+TGG + Chr1:14062308-14062327 MsG0180000982.01.T01:intron 20.0%
!! TTAAAAAAAAGGAACAAAGT+GGG + Chr1:14063450-14063469 MsG0180000982.01.T01:intron 20.0%
!!! AAGCAATCATAATATTTTTG+GGG - Chr1:14064401-14064420 None:intergenic 20.0%
!!! ATAATCAAAGTTTTGACATT+TGG + Chr1:14064098-14064117 MsG0180000982.01.T01:intron 20.0%
!!! ATGTTTATTGAGAACTTTTT+CGG + Chr1:14066359-14066378 MsG0180000982.01.T01:three_prime_UTR 20.0%
!!! GTAACAATAATTTGTTAGTT+TGG + Chr1:14063637-14063656 MsG0180000982.01.T01:intron 20.0%
!!! GTTTATCTTATAGTTTTTCT+AGG - Chr1:14062240-14062259 None:intergenic 20.0%
!!! GTTTCTAAAAATTATAGTAC+CGG - Chr1:14062754-14062773 None:intergenic 20.0%
!!! TGTCTCTTTTATTTTCAAAA+TGG - Chr1:14066392-14066411 None:intergenic 20.0%
!!! TTTATATTTGCTTTGGATTA+AGG - Chr1:14061802-14061821 None:intergenic 20.0%
! AAAATGCAAAATGTTAGACA+CGG - Chr1:14063348-14063367 None:intergenic 25.0%
! AAAGATTGTGTAAACAGTAA+TGG - Chr1:14064947-14064966 None:intergenic 25.0%
! AAGATTGTGTAAACAGTAAT+GGG - Chr1:14064946-14064965 None:intergenic 25.0%
! AAGGTTATGTTAGAATTGAA+TGG - Chr1:14063180-14063199 None:intergenic 25.0%
! ACAAGGTTAAATTATAGCTT+TGG + Chr1:14062511-14062530 MsG0180000982.01.T01:intron 25.0%
! ACCAATAATAAGTGGAAAAT+AGG + Chr1:14061913-14061932 MsG0180000982.01.T01:intron 25.0%
! ACTAACTTTGCAATAAGAAT+AGG - Chr1:14065889-14065908 None:intergenic 25.0%
! ACTCAACTATAAGATATATC+AGG - Chr1:14064291-14064310 None:intergenic 25.0%
! AGAAATCTACAATAACATGA+AGG - Chr1:14064605-14064624 None:intergenic 25.0%
! AGAAATGAAGTTGTTTAGTT+TGG + Chr1:14062972-14062991 MsG0180000982.01.T01:exon 25.0%
! AGTAAGAAATAGAAGTTACT+CGG - Chr1:14064132-14064151 None:intergenic 25.0%
! CAATACTTAAGACTTCATTA+CGG - Chr1:14064017-14064036 None:intergenic 25.0%
! CATCAAAATAAGTTAAGCTT+CGG - Chr1:14066184-14066203 None:intergenic 25.0%
! CCAAACGAAAAGAAAATATA+TGG - Chr1:14065185-14065204 None:intergenic 25.0%
! CTTGATCAATTACCAAATTA+TGG + Chr1:14064073-14064092 MsG0180000982.01.T01:intron 25.0%
! GATACCATCAATTACATTAT+GGG - Chr1:14064326-14064345 None:intergenic 25.0%
! GCAATCTTAAATATATCTGA+TGG - Chr1:14064168-14064187 None:intergenic 25.0%
! TAATGAATTAGAGCCAAATA+TGG + Chr1:14062281-14062300 MsG0180000982.01.T01:intron 25.0%
! TAGTTACTTAATTGTACATC+TGG + Chr1:14062675-14062694 MsG0180000982.01.T01:intron 25.0%
! TATAAAAAGATTCATCCTTC+TGG - Chr1:14063502-14063521 None:intergenic 25.0%
! TCATGTTATTGTAGATTTCT+GGG + Chr1:14064605-14064624 MsG0180000982.01.T01:intron 25.0%
! TGATATCAACCAATAATAAG+TGG + Chr1:14061905-14061924 MsG0180000982.01.T01:intron 25.0%
! TGGATAATACTGTTAAGATA+TGG + Chr1:14064199-14064218 MsG0180000982.01.T01:CDS 25.0%
! TTCATGTTATTGTAGATTTC+TGG + Chr1:14064604-14064623 MsG0180000982.01.T01:intron 25.0%
!! AATCTTTTTATACAGTAAGC+TGG + Chr1:14063510-14063529 MsG0180000982.01.T01:CDS 25.0%
!! AGGTGATTTCTTCATATTTT+TGG + Chr1:14066035-14066054 MsG0180000982.01.T01:intron 25.0%
!! ATCTTTTTATACAGTAAGCT+GGG + Chr1:14063511-14063530 MsG0180000982.01.T01:CDS 25.0%
!! CCATATATTTTCTTTTCGTT+TGG + Chr1:14065182-14065201 MsG0180000982.01.T01:intron 25.0%
!! CTTTTTCTTCTTCGTTTATT+AGG + Chr1:14063234-14063253 MsG0180000982.01.T01:intron 25.0%
!! GAAATGAAGTTGTTTAGTTT+GGG + Chr1:14062973-14062992 MsG0180000982.01.T01:exon 25.0%
!! TAAAATAAACTGCTACTTAC+AGG - Chr1:14064699-14064718 None:intergenic 25.0%
!! TAACTTCTATTTCTTACTGT+AGG + Chr1:14064134-14064153 MsG0180000982.01.T01:intron 25.0%
!! TAAGTATTGTGAGTGTATTA+TGG + Chr1:14064028-14064047 MsG0180000982.01.T01:intron 25.0%
!! TAGCTTTCATCTTTTCTATA+TGG - Chr1:14064353-14064372 None:intergenic 25.0%
!! TTCATCTTTTCTATATGGTA+CGG - Chr1:14064348-14064367 None:intergenic 25.0%
!! TTTACCATCTTTTCTACTAT+AGG - Chr1:14062111-14062130 None:intergenic 25.0%
!!! AGCAATCATAATATTTTTGG+GGG - Chr1:14064400-14064419 None:intergenic 25.0%
!!! ATATTTGGCTCTAATTCATT+AGG - Chr1:14062282-14062301 None:intergenic 25.0%
!!! ATATTTTTATGTTGACCAGA+AGG + Chr1:14063484-14063503 MsG0180000982.01.T01:intron 25.0%
!!! ATCATTTTTTGGTATCACTT+TGG + Chr1:14065083-14065102 MsG0180000982.01.T01:intron 25.0%
!!! TCCGTTTTTTTTTTTCCTTT+TGG + Chr1:14065807-14065826 MsG0180000982.01.T01:intron 25.0%
AAAAATAGGCTTAGGTAGTT+TGG + Chr1:14062129-14062148 MsG0180000982.01.T01:intron 30.0%
AAAATAGGCTTAGGTAGTTT+GGG + Chr1:14062130-14062149 MsG0180000982.01.T01:intron 30.0%
AACTTTGCAATAAGAATAGG+AGG - Chr1:14065886-14065905 None:intergenic 30.0%
AATAAACACCACAATCAAAG+TGG - Chr1:14063391-14063410 None:intergenic 30.0%
AATAACTTATAAGGTTGACC+AGG + Chr1:14063921-14063940 MsG0180000982.01.T01:intron 30.0%
ACACCAAAACAAATCCAAAT+CGG + Chr1:14061524-14061543 MsG0180000982.01.T01:five_prime_UTR 30.0%
ACTATTTATCAATGCCTTCA+AGG + Chr1:14063259-14063278 MsG0180000982.01.T01:CDS 30.0%
AGATGGTAAAAAATAGGCTT+AGG + Chr1:14062121-14062140 MsG0180000982.01.T01:intron 30.0%
ATCTCCCATAATGTAATTGA+TGG + Chr1:14064319-14064338 MsG0180000982.01.T01:intron 30.0%
ATGAACCATATATCACATTC+GGG - Chr1:14065562-14065581 None:intergenic 30.0%
ATGTAGAACAATCATTCACA+TGG + Chr1:14064631-14064650 MsG0180000982.01.T01:CDS 30.0%
ATTGGATTATTGATCAAACC+AGG - Chr1:14062814-14062833 None:intergenic 30.0%
CAATAACATGAAGGTAACAA+TGG - Chr1:14064596-14064615 None:intergenic 30.0%
CAATTACATTATGGGAGATA+CGG - Chr1:14064318-14064337 None:intergenic 30.0%
CATATCAATGAACATGTTAG+CGG + Chr1:14061970-14061989 MsG0180000982.01.T01:intron 30.0%
CATGTTATTGTAGATTTCTG+GGG + Chr1:14064606-14064625 MsG0180000982.01.T01:intron 30.0%
CTGCATATTTCAAAACAAGT+TGG + Chr1:14062944-14062963 MsG0180000982.01.T01:five_prime_UTR 30.0%
GAATCATGTAAATTTCAGCT+AGG - Chr1:14064924-14064943 None:intergenic 30.0%
GATGAACCATATATCACATT+CGG - Chr1:14065563-14065582 None:intergenic 30.0%
GGATACCATCAATTACATTA+TGG - Chr1:14064327-14064346 None:intergenic 30.0%
GGTATAATTCGAGTCATTAA+TGG + Chr1:14063581-14063600 MsG0180000982.01.T01:CDS 30.0%
GTAAGAAATAGAAGTTACTC+GGG - Chr1:14064131-14064150 None:intergenic 30.0%
GTACATATATCCATTTCAAG+TGG + Chr1:14062785-14062804 MsG0180000982.01.T01:intron 30.0%
GTTAAGATATGGTCTATGAA+GGG + Chr1:14064210-14064229 MsG0180000982.01.T01:CDS 30.0%
TAGAAACAGTAGTTTGGAAA+TGG + Chr1:14064978-14064997 MsG0180000982.01.T01:intron 30.0%
TGGTAATTGATCAAGTCAAA+GGG - Chr1:14064068-14064087 None:intergenic 30.0%
TGTTAAGATATGGTCTATGA+AGG + Chr1:14064209-14064228 MsG0180000982.01.T01:CDS 30.0%
TGTTCAGAAAGAGTTCAATT+TGG - Chr1:14062602-14062621 None:intergenic 30.0%
TTCGTTGTTGTAACTGAATT+AGG + Chr1:14062376-14062395 MsG0180000982.01.T01:intron 30.0%
TTCTTGTGATTTCCATTTCA+AGG + Chr1:14065588-14065607 MsG0180000982.01.T01:CDS 30.0%
TTGAAAACAACAGCATATAG+AGG - Chr1:14063081-14063100 None:intergenic 30.0%
TTGAGTCCTGATTTCATTTA+TGG - Chr1:14063807-14063826 None:intergenic 30.0%
! ATACTTTTGGATGTGATAAC+TGG - Chr1:14064439-14064458 None:intergenic 30.0%
! ATATTTAAGATTGCCAGTTG+TGG + Chr1:14064174-14064193 MsG0180000982.01.T01:CDS 30.0%
! ATTACGTTGATTGTACTAGA+TGG + Chr1:14064801-14064820 MsG0180000982.01.T01:CDS 30.0%
! ATTTTGTGGGAAACTTAGAA+GGG - Chr1:14064665-14064684 None:intergenic 30.0%
! CAGCGTTTTTATATTTGCTT+TGG - Chr1:14061809-14061828 None:intergenic 30.0%
! GCCTATTTTCCACTTATTAT+TGG - Chr1:14061917-14061936 None:intergenic 30.0%
! GTGAATTTTTGCTCCAATTT+AGG + Chr1:14062422-14062441 MsG0180000982.01.T01:intron 30.0%
! TATTTGCTTTGGATTAAGGA+AGG - Chr1:14061798-14061817 None:intergenic 30.0%
! TATTTTGTGGGAAACTTAGA+AGG - Chr1:14064666-14064685 None:intergenic 30.0%
! TCGCTTTGATTTAATTCAAC+TGG + Chr1:14062546-14062565 MsG0180000982.01.T01:intron 30.0%
! TGACTAAATGTGATTGACTT+TGG + Chr1:14062576-14062595 MsG0180000982.01.T01:intron 30.0%
! TTGGTAATTGATCAAGTCAA+AGG - Chr1:14064069-14064088 None:intergenic 30.0%
! TTTATGGATTTGACTAGTCA+TGG + Chr1:14066256-14066275 MsG0180000982.01.T01:three_prime_UTR 30.0%
!! AAGGAGCATTAAGTAAGTAT+TGG - Chr1:14061779-14061798 None:intergenic 30.0%
!! ATATTCAAATCACTGACTCA+TGG - Chr1:14065323-14065342 None:intergenic 30.0%
!! CTTTTGAGTGCAAAGAAAAA+AGG - Chr1:14063199-14063218 None:intergenic 30.0%
!! CTTTTGTAGATGATGATGTA+AGG + Chr1:14063305-14063324 MsG0180000982.01.T01:intron 30.0%
!! TCCAAACTACTGTTTCTATT+TGG - Chr1:14064976-14064995 None:intergenic 30.0%
!! TGATTTATAACTGATTCGTG+AGG - Chr1:14065023-14065042 None:intergenic 30.0%
!! TTTGTTAGTTTGGAGTTTTG+TGG + Chr1:14063647-14063666 MsG0180000982.01.T01:intron 30.0%
!! TTTTAACTATGAAGGGATAC+AGG + Chr1:14064515-14064534 MsG0180000982.01.T01:intron 30.0%
!!! AGGTTTTAAATTGACAACAG+TGG + Chr1:14064535-14064554 MsG0180000982.01.T01:intron 30.0%
!!! ATTTTGAGATTGACTCTATG+TGG - Chr1:14064491-14064510 None:intergenic 30.0%
!!! GTATGTGTTTTGATATTTGC+TGG + Chr1:14063979-14063998 MsG0180000982.01.T01:CDS 30.0%
AAAAGTGAAGGAACAATCTC+CGG + Chr1:14065411-14065430 MsG0180000982.01.T01:CDS 35.0%
AAAGAGAGTGAGCAAGAAAA+CGG + Chr1:14061576-14061595 MsG0180000982.01.T01:five_prime_UTR 35.0%
AACAAATCCAAATCGGCAAA+CGG + Chr1:14061531-14061550 MsG0180000982.01.T01:five_prime_UTR 35.0%
AAGAAATCACCTTCCATCAT+GGG - Chr1:14066027-14066046 None:intergenic 35.0%
AGACTAGACAGGATATGATT+AGG + Chr1:14062023-14062042 MsG0180000982.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + Chr1:14062104-14062123 MsG0180000982.01.T01:intron 35.0%
AGTTTAGTCGATCTATTGTG+TGG + Chr1:14066300-14066319 MsG0180000982.01.T01:three_prime_UTR 35.0%
ATAAACCAGAAAGCTCATGT+TGG - Chr1:14066241-14066260 None:intergenic 35.0%
ATAATTTAACCTTGTCCCAC+AGG - Chr1:14062506-14062525 None:intergenic 35.0%
ATATATCACATTCGGGAACA+GGG - Chr1:14065555-14065574 None:intergenic 35.0%
ATTTATCAATGCCTTCAAGG+AGG + Chr1:14063262-14063281 MsG0180000982.01.T01:CDS 35.0%
CATATACCTCTTGTCACTAT+CGG - Chr1:14065695-14065714 None:intergenic 35.0%
CTCAATCAAAATCTCCAATC+AGG + Chr1:14065988-14066007 MsG0180000982.01.T01:CDS 35.0%
GAAAAGATGAAAGCTATACC+AGG + Chr1:14064357-14064376 MsG0180000982.01.T01:intron 35.0%
GAATTAGGAAGTCATAGAGT+GGG + Chr1:14062391-14062410 MsG0180000982.01.T01:intron 35.0%
GACAACAACAATTCTTCAGT+CGG + Chr1:14062892-14062911 MsG0180000982.01.T01:five_prime_UTR 35.0%
GACAATCAAACTCTTTCCAA+CGG - Chr1:14064886-14064905 None:intergenic 35.0%
GCCAAATAGAAACAGTAGTT+TGG + Chr1:14064972-14064991 MsG0180000982.01.T01:intron 35.0%
GGATAAACAAAAGCAACCAA+TGG - Chr1:14064270-14064289 None:intergenic 35.0%
GGGAATTATTGGAACTTTCT+TGG + Chr1:14065118-14065137 MsG0180000982.01.T01:intron 35.0%
GGTAATTGATCAAGTCAAAG+GGG - Chr1:14064067-14064086 None:intergenic 35.0%
GTAAGTGAAATAACAGAGAG+AGG - Chr1:14063876-14063895 None:intergenic 35.0%
GTTGATTGTACTAGATGGTT+GGG + Chr1:14064806-14064825 MsG0180000982.01.T01:CDS 35.0%
TATTGGAACTTTCTTGGACT+TGG + Chr1:14065124-14065143 MsG0180000982.01.T01:intron 35.0%
TCGGTAACTTGAATTCTTCA+AGG + Chr1:14063010-14063029 MsG0180000982.01.T01:CDS 35.0%
TGAATTAGGAAGTCATAGAG+TGG + Chr1:14062390-14062409 MsG0180000982.01.T01:intron 35.0%
TGACCATGAAATTGTCTTGT+GGG + Chr1:14065384-14065403 MsG0180000982.01.T01:CDS 35.0%
TTGAAAACAGGAGAAGAAGA+AGG - Chr1:14061683-14061702 None:intergenic 35.0%
TTGACCATGAAATTGTCTTG+TGG + Chr1:14065383-14065402 MsG0180000982.01.T01:CDS 35.0%
TTGATTGTACTAGATGGTTG+GGG + Chr1:14064807-14064826 MsG0180000982.01.T01:CDS 35.0%
TTGGAAATGGTATGCTTCAA+TGG + Chr1:14064991-14065010 MsG0180000982.01.T01:intron 35.0%
! AATTGCACTGCTTGTTAACA+GGG + Chr1:14062861-14062880 MsG0180000982.01.T01:intron 35.0%
! ATTTTATTGAAGGGTTGCAG+AGG - Chr1:14065227-14065246 None:intergenic 35.0%
! CAATTTAGGATCCTTGTACT+GGG + Chr1:14062436-14062455 MsG0180000982.01.T01:intron 35.0%
! CCTGTTTTCAACTACTACTA+CGG + Chr1:14061692-14061711 MsG0180000982.01.T01:intron 35.0%
! GAAAATCATGTGACTTTTCC+TGG - Chr1:14064378-14064397 None:intergenic 35.0%
! GAACAACAACAAAGCCTTAT+CGG - Chr1:14062359-14062378 None:intergenic 35.0%
! GCTTCATCCTTTTCATTGTT+TGG + Chr1:14065495-14065514 MsG0180000982.01.T01:intron 35.0%
! GGAAGGGAAGATTTTTCTTT+GGG + Chr1:14065846-14065865 MsG0180000982.01.T01:CDS 35.0%
! GGGATTTTTCTGTGTCTTTT+TGG + Chr1:14062473-14062492 MsG0180000982.01.T01:intron 35.0%
! TAATTGCACTGCTTGTTAAC+AGG + Chr1:14062860-14062879 MsG0180000982.01.T01:intron 35.0%
!! AACATGAGCTTTCTGGTTTA+TGG + Chr1:14066240-14066259 MsG0180000982.01.T01:three_prime_UTR 35.0%
!! AGTCCATTTTGGTGATAACT+TGG + Chr1:14065297-14065316 MsG0180000982.01.T01:intron 35.0%
!!! TGAGGCGTTTAGTTTTATGT+CGG + Chr1:14064233-14064252 MsG0180000982.01.T01:CDS 35.0%
!!! TTGCCGATTTGGATTTGTTT+TGG - Chr1:14061530-14061549 None:intergenic 35.0%
AAACACCACAATCAAAGTGG+TGG - Chr1:14063388-14063407 None:intergenic 40.0%
AAAGTGAAGGAACAATCTCC+GGG + Chr1:14065412-14065431 MsG0180000982.01.T01:CDS 40.0%
AACAAAACTCTGTAGGGAGA+AGG - Chr1:14063771-14063790 None:intergenic 40.0%
AACAATTCTTCAGTCGGAAG+TGG + Chr1:14062898-14062917 MsG0180000982.01.T01:five_prime_UTR 40.0%
AAGGCATGTGCAATAGGTAA+GGG + Chr1:14065607-14065626 MsG0180000982.01.T01:intron 40.0%
ACAAAACTCTGTAGGGAGAA+GGG - Chr1:14063770-14063789 None:intergenic 40.0%
AGTATTATCCATGCCACAAC+TGG - Chr1:14064190-14064209 None:intergenic 40.0%
AGTCAGATTAGAAGAGGTAG+AGG + Chr1:14062210-14062229 MsG0180000982.01.T01:intron 40.0%
AGTTGGAAGAGAGAAAGTTG+AGG + Chr1:14065265-14065284 MsG0180000982.01.T01:intron 40.0%
ATGGCCAACAAAACTCTGTA+GGG - Chr1:14063777-14063796 None:intergenic 40.0%
ATTAGTCCGATAGTGACAAG+AGG + Chr1:14065686-14065705 MsG0180000982.01.T01:intron 40.0%
CAACTACTACTACGGTTTCT+GGG + Chr1:14061700-14061719 MsG0180000982.01.T01:intron 40.0%
CAATTTCATGGTCAACACTC+TGG - Chr1:14065378-14065397 None:intergenic 40.0%
CAGAAACTGCACAAACAACA+TGG - Chr1:14061861-14061880 None:intergenic 40.0%
CATATATCACATTCGGGAAC+AGG - Chr1:14065556-14065575 None:intergenic 40.0%
CATTTCAAGGCATGTGCAAT+AGG + Chr1:14065601-14065620 MsG0180000982.01.T01:CDS 40.0%
CCAGTACAAGGATCCTAAAT+TGG - Chr1:14062438-14062457 None:intergenic 40.0%
CCGTAGTAGTAGTTGAAAAC+AGG - Chr1:14061695-14061714 None:intergenic 40.0%
CTATTGCACATGCCTTGAAA+TGG - Chr1:14065603-14065622 None:intergenic 40.0%
CTGTTCCCGAATGTGATATA+TGG + Chr1:14065554-14065573 MsG0180000982.01.T01:CDS 40.0%
GAAGAAATCACCTTCCATCA+TGG - Chr1:14066028-14066047 None:intergenic 40.0%
GATGAGTGATAAGACTAGAC+AGG + Chr1:14062012-14062031 MsG0180000982.01.T01:intron 40.0%
GGAGCAAAAATTCACATGCT+TGG - Chr1:14062417-14062436 None:intergenic 40.0%
GGGACTCCATAAATGAAATC+AGG + Chr1:14063798-14063817 MsG0180000982.01.T01:intron 40.0%
GTAATCCAACATGAGCTTTC+TGG + Chr1:14066233-14066252 MsG0180000982.01.T01:three_prime_UTR 40.0%
GTTCCCACAAGACAATTTCA+TGG - Chr1:14065390-14065409 None:intergenic 40.0%
TAGCGATGAGAAGTTACACA+AGG + Chr1:14063604-14063623 MsG0180000982.01.T01:CDS 40.0%
TCAACTACTACTACGGTTTC+TGG + Chr1:14061699-14061718 MsG0180000982.01.T01:intron 40.0%
TCGACTAAACTCGATAAACC+AGG - Chr1:14066291-14066310 None:intergenic 40.0%
TGATTGTACTAGATGGTTGG+GGG + Chr1:14064808-14064827 MsG0180000982.01.T01:CDS 40.0%
TGGCCAAGTTATCACCAAAA+TGG - Chr1:14065303-14065322 None:intergenic 40.0%
TTTCATTTATGGAGTCCCCA+TGG - Chr1:14063796-14063815 None:intergenic 40.0%
! AGAGAGAAAGTTGAGGCATT+AGG + Chr1:14065272-14065291 MsG0180000982.01.T01:intron 40.0%
! AGGAAACTGCACGTATTTTG+TGG - Chr1:14064679-14064698 None:intergenic 40.0%
! ATTGCACTGCTTGTTAACAG+GGG + Chr1:14062862-14062881 MsG0180000982.01.T01:intron 40.0%
! ATTTTATGTTGCTGCGACGA+TGG + Chr1:14066129-14066148 MsG0180000982.01.T01:CDS 40.0%
! CCAATTTAGGATCCTTGTAC+TGG + Chr1:14062435-14062454 MsG0180000982.01.T01:intron 40.0%
! CGTTGATTGTACTAGATGGT+TGG + Chr1:14064805-14064824 MsG0180000982.01.T01:CDS 40.0%
! GGAAACTGCACGTATTTTGT+GGG - Chr1:14064678-14064697 None:intergenic 40.0%
! GGAGATTGTTCCTTCACTTT+TGG - Chr1:14065412-14065431 None:intergenic 40.0%
! GGGAAGGGAAGATTTTTCTT+TGG + Chr1:14065845-14065864 MsG0180000982.01.T01:CDS 40.0%
! TTTTTCCTTTTGGATCTGCC+AGG + Chr1:14065817-14065836 MsG0180000982.01.T01:intron 40.0%
!! GTTTTGATATTTGCTGGAGC+TGG + Chr1:14063985-14064004 MsG0180000982.01.T01:CDS 40.0%
!! TACTACGGTTTCTGGGATTT+AGG + Chr1:14061707-14061726 MsG0180000982.01.T01:intron 40.0%
!! TTCTCCCTACAGAGTTTTGT+TGG + Chr1:14063770-14063789 MsG0180000982.01.T01:intron 40.0%
!! TTTGGTATCACTTTGGTGCT+CGG + Chr1:14065090-14065109 MsG0180000982.01.T01:intron 40.0%
!!! CTTTTTGGCTTTGATCCTGT+GGG + Chr1:14062488-14062507 MsG0180000982.01.T01:intron 40.0%
!!! TACAGAGTTTTGTTGGCCAT+GGG + Chr1:14063777-14063796 MsG0180000982.01.T01:intron 40.0%
!!! TCTTTTTGGCTTTGATCCTG+TGG + Chr1:14062487-14062506 MsG0180000982.01.T01:intron 40.0%
AAATCAGGACTCAAGCGATG+AGG + Chr1:14063813-14063832 MsG0180000982.01.T01:intron 45.0%
AACCAGGAAGCCACTTGAAA+TGG - Chr1:14062798-14062817 None:intergenic 45.0%
AAGTGAAGGAACAATCTCCG+GGG + Chr1:14065413-14065432 MsG0180000982.01.T01:CDS 45.0%
AGAGAGAGAGAGAGAGAGTT+GGG + Chr1:14062076-14062095 MsG0180000982.01.T01:intron 45.0%
AGAGTGAGTTACCTTCAGGT+TGG + Chr1:14065959-14065978 MsG0180000982.01.T01:intron 45.0%
AGCAAACACTCACCTTTGAG+AGG - Chr1:14064841-14064860 None:intergenic 45.0%
AGTACGGAGAGTAGATCAGA+TGG + Chr1:14062182-14062201 MsG0180000982.01.T01:intron 45.0%
ATCGCAAACAAATCGCAAGC+AGG + Chr1:14061610-14061629 MsG0180000982.01.T01:five_prime_UTR 45.0%
CAAGGCATGTGCAATAGGTA+AGG + Chr1:14065606-14065625 MsG0180000982.01.T01:intron 45.0%
CAGCAATAACTCCTCCTTGA+AGG - Chr1:14063276-14063295 None:intergenic 45.0%
CATGGCCAACAAAACTCTGT+AGG - Chr1:14063778-14063797 None:intergenic 45.0%
CGGTTATGGAATGTTCACAC+TGG + Chr1:14063955-14063974 MsG0180000982.01.T01:CDS 45.0%
CTAGCAGATATCACAAGTGC+TGG - Chr1:14063839-14063858 None:intergenic 45.0%
CTCCGTACTAAAGCATATGC+CGG - Chr1:14062171-14062190 None:intergenic 45.0%
CTCTACCACCACTTTGATTG+TGG + Chr1:14063380-14063399 MsG0180000982.01.T01:intron 45.0%
CTCTCTCTCTCTCTCTCTAA+TGG - Chr1:14062056-14062075 None:intergenic 45.0%
CTTGTGGGAACCAAAAGTGA+AGG + Chr1:14065399-14065418 MsG0180000982.01.T01:CDS 45.0%
GACCGGCATATGCTTTAGTA+CGG + Chr1:14062166-14062185 MsG0180000982.01.T01:intron 45.0%
GAGGAGAGTCAGATTAGAAG+AGG + Chr1:14062204-14062223 MsG0180000982.01.T01:intron 45.0%
GATATGGTCTATGAAGGGTG+AGG + Chr1:14064215-14064234 MsG0180000982.01.T01:CDS 45.0%
GCTAAGAGTGAGTTACCTTC+AGG + Chr1:14065955-14065974 MsG0180000982.01.T01:intron 45.0%
GCTCGGTACATGGGAATTAT+TGG + Chr1:14065107-14065126 MsG0180000982.01.T01:intron 45.0%
GGGGGAATTTATCCTCTCAA+AGG + Chr1:14064826-14064845 MsG0180000982.01.T01:CDS 45.0%
GTCGGCTGCTATTATTCCAT+TGG + Chr1:14064251-14064270 MsG0180000982.01.T01:CDS 45.0%
GTTAGACACGGAAGAGAGTA+GGG - Chr1:14063336-14063355 None:intergenic 45.0%
TAAGATTGCCAGTTGTGGCA+TGG + Chr1:14064179-14064198 MsG0180000982.01.T01:CDS 45.0%
TAAGGTTGACCAGGATGAGT+CGG + Chr1:14063930-14063949 MsG0180000982.01.T01:intron 45.0%
TAGTTTGGGAACTGAACCAG+TGG + Chr1:14062987-14063006 MsG0180000982.01.T01:CDS 45.0%
TGAACATGTTAGCGGAGATG+AGG + Chr1:14061978-14061997 MsG0180000982.01.T01:intron 45.0%
TGGCGAAAACGTTGAAGTAG+CGG - Chr1:14063116-14063135 None:intergenic 45.0%
TGTTAGACACGGAAGAGAGT+AGG - Chr1:14063337-14063356 None:intergenic 45.0%
TTACCGCGTGTATACTTCTC+AGG + Chr1:14061752-14061771 MsG0180000982.01.T01:intron 45.0%
TTGAGTATGCACCAACCTGA+AGG - Chr1:14065973-14065992 None:intergenic 45.0%
! ATCCATTTCAAGTGGCTTCC+TGG + Chr1:14062793-14062812 MsG0180000982.01.T01:intron 45.0%
! CAACAAAGCCTTATCGGTGT+CGG - Chr1:14062353-14062372 None:intergenic 45.0%
! GAATTCAAGTTACCGACCAC+TGG - Chr1:14063006-14063025 None:intergenic 45.0%
! GGCATTAGGTGAGTCCATTT+TGG + Chr1:14065286-14065305 MsG0180000982.01.T01:intron 45.0%
! TTCAACGTTTTCGCCACAGT+TGG + Chr1:14063120-14063139 MsG0180000982.01.T01:CDS 45.0%
! TTGATATTTGCTGGAGCTGG+AGG + Chr1:14063988-14064007 MsG0180000982.01.T01:CDS 45.0%
! TTGCACTGCTTGTTAACAGG+GGG + Chr1:14062863-14062882 MsG0180000982.01.T01:intron 45.0%
!! TAGTTCTAACTAACCTCCCC+CGG - Chr1:14065433-14065452 None:intergenic 45.0%
!!! ACAGAGTTTTGTTGGCCATG+GGG + Chr1:14063778-14063797 MsG0180000982.01.T01:intron 45.0%
!!! CTACAGAGTTTTGTTGGCCA+TGG + Chr1:14063776-14063795 MsG0180000982.01.T01:intron 45.0%
AACGGCAAGTAGACTGACAC+TGG - Chr1:14064868-14064887 None:intergenic 50.0%
ACGATGGAACAATATGGCGC+TGG + Chr1:14066145-14066164 MsG0180000982.01.T01:CDS 50.0%
ACGGAGAGTAGATCAGATGG+AGG + Chr1:14062185-14062204 MsG0180000982.01.T01:intron 50.0%
AGCTGGGCATGCAATACCAA+TGG + Chr1:14063527-14063546 MsG0180000982.01.T01:CDS 50.0%
AGTGAAGGAACAATCTCCGG+GGG + Chr1:14065414-14065433 MsG0180000982.01.T01:CDS 50.0%
AGTGTCAGTCTACTTGCCGT+TGG + Chr1:14064867-14064886 MsG0180000982.01.T01:intron 50.0%
CAAACTGCTCTGTCCCATGA+TGG + Chr1:14066011-14066030 MsG0180000982.01.T01:CDS 50.0%
CGATGGAACAATATGGCGCT+GGG + Chr1:14066146-14066165 MsG0180000982.01.T01:CDS 50.0%
CGGAGATGAGGATGTTGTGT+TGG + Chr1:14061990-14062009 MsG0180000982.01.T01:intron 50.0%
CTGGGCATGCAATACCAATG+GGG + Chr1:14063529-14063548 MsG0180000982.01.T01:CDS 50.0%
GACAGAGCAGTTTGCCTGAT+TGG - Chr1:14066005-14066024 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGT+TGG + Chr1:14062075-14062094 MsG0180000982.01.T01:intron 50.0%
GAGAGAGAGAGAGAGAGTTG+GGG + Chr1:14062077-14062096 MsG0180000982.01.T01:intron 50.0%
GATCCTTGTACTGGGCTTTG+TGG + Chr1:14062444-14062463 MsG0180000982.01.T01:intron 50.0%
GCTGCGACGATGGAACAATA+TGG + Chr1:14066139-14066158 MsG0180000982.01.T01:CDS 50.0%
GCTGGGCATGCAATACCAAT+GGG + Chr1:14063528-14063547 MsG0180000982.01.T01:CDS 50.0%
GGCGAAAACGTTGAAGTAGC+GGG - Chr1:14063115-14063134 None:intergenic 50.0%
TAGTCATGGACACGAGAACC+TGG + Chr1:14066270-14066289 MsG0180000982.01.T01:three_prime_UTR 50.0%
TGGGCATGTAGAGAGAAGAC+CGG + Chr1:14062149-14062168 MsG0180000982.01.T01:intron 50.0%
TGTTGCCTGGCAGATCCAAA+AGG - Chr1:14065825-14065844 None:intergenic 50.0%
TTGACCAGGATGAGTCGGTT+CGG + Chr1:14063935-14063954 MsG0180000982.01.T01:CDS 50.0%
TTGGGAACTGAACCAGTGGT+CGG + Chr1:14062991-14063010 MsG0180000982.01.T01:CDS 50.0%
TTTGGATCTGCCAGGCAACA+GGG + Chr1:14065825-14065844 MsG0180000982.01.T01:intron 50.0%
! AACGTTTTCGCCACAGTTGG+TGG + Chr1:14063123-14063142 MsG0180000982.01.T01:CDS 50.0%
! ACTGCTTGTTAACAGGGGGT+GGG + Chr1:14062867-14062886 MsG0180000982.01.T01:intron 50.0%
! ATAACCGAACCGACTCATCC+TGG - Chr1:14063942-14063961 None:intergenic 50.0%
! GGACCTGAGAAGTATACACG+CGG - Chr1:14061758-14061777 None:intergenic 50.0%
! TTTTGGATCTGCCAGGCAAC+AGG + Chr1:14065824-14065843 MsG0180000982.01.T01:intron 50.0%
!! AGGATGAGTCGGTTCGGTTA+TGG + Chr1:14063941-14063960 MsG0180000982.01.T01:CDS 50.0%
!! CACTTTGGTGCTCGGTACAT+GGG + Chr1:14065098-14065117 MsG0180000982.01.T01:intron 50.0%
!! GGGAGAAGGGTGTCATTTCA+AGG - Chr1:14063757-14063776 None:intergenic 50.0%
!! TCACTTTGGTGCTCGGTACA+TGG + Chr1:14065097-14065116 MsG0180000982.01.T01:intron 50.0%
AACCCGATTGCCACCAACTG+TGG - Chr1:14063136-14063155 None:intergenic 55.0%
AGTCACCAATCGCCTCCAAG+AGG + Chr1:14063047-14063066 MsG0180000982.01.T01:CDS 55.0%
ATAGAGGACGCTTGCCCTCT+TGG - Chr1:14063065-14063084 None:intergenic 55.0%
ATCTGCCAGGCAACAGGGAA+GGG + Chr1:14065830-14065849 MsG0180000982.01.T01:intron 55.0%
ATCTTCCCTTCCCTGTTGCC+TGG - Chr1:14065838-14065857 None:intergenic 55.0%
CCATGTAGCCGACACCGATA+AGG + Chr1:14062342-14062361 MsG0180000982.01.T01:intron 55.0%
GTCACCAATCGCCTCCAAGA+GGG + Chr1:14063048-14063067 MsG0180000982.01.T01:CDS 55.0%
GTGCCACAAAGCCCAGTACA+AGG - Chr1:14062450-14062469 None:intergenic 55.0%
! ACTGGGCTTTGTGGCACTCT+GGG + Chr1:14062453-14062472 MsG0180000982.01.T01:intron 55.0%
! CACTGCTTGTTAACAGGGGG+TGG + Chr1:14062866-14062885 MsG0180000982.01.T01:intron 55.0%
! CTGCTCTGTCCCATGATGGA+AGG + Chr1:14066015-14066034 MsG0180000982.01.T01:CDS 55.0%
! CTGCTTGCCGTTTGCCGATT+TGG - Chr1:14061541-14061560 None:intergenic 55.0%
! CTGCTTGTTAACAGGGGGTG+GGG + Chr1:14062868-14062887 MsG0180000982.01.T01:intron 55.0%
! GGCTTTGATCCTGTGGGACA+AGG + Chr1:14062494-14062513 MsG0180000982.01.T01:intron 55.0%
! TACTGGGCTTTGTGGCACTC+TGG + Chr1:14062452-14062471 MsG0180000982.01.T01:intron 55.0%
!! CCTTATCGGTGTCGGCTACA+TGG - Chr1:14062345-14062364 None:intergenic 55.0%
!! TCGCCACAGTTGGTGGCAAT+CGG + Chr1:14063130-14063149 MsG0180000982.01.T01:CDS 55.0%
ACTCCTCCAGCCACAGCAAG+CGG - Chr1:14063557-14063576 None:intergenic 60.0%
CTTGCCCTCTTGGAGGCGAT+TGG - Chr1:14063055-14063074 None:intergenic 60.0%
GAAGGAACAATCTCCGGGGG+AGG + Chr1:14065417-14065436 MsG0180000982.01.T01:CDS 60.0%
GATCTGCCAGGCAACAGGGA+AGG + Chr1:14065829-14065848 MsG0180000982.01.T01:intron 60.0%
GCTGTGGCTGGAGGAGTCAA+TGG + Chr1:14063560-14063579 MsG0180000982.01.T01:CDS 60.0%
! ATGTCGACTGCGCCCTGAAG+AGG - Chr1:14065520-14065539 None:intergenic 60.0%
! TGTCGACTGCGCCCTGAAGA+GGG - Chr1:14065519-14065538 None:intergenic 60.0%
!! CGCCACAGTTGGTGGCAATC+GGG + Chr1:14063131-14063150 MsG0180000982.01.T01:CDS 60.0%
CACAGCAAGCGGAGCCCCAT+TGG - Chr1:14063546-14063565 None:intergenic 65.0%
GAGGACGCTTGCCCTCTTGG+AGG - Chr1:14063062-14063081 None:intergenic 65.0%
! CAATGGGGCTCCGCTTGCTG+TGG + Chr1:14063544-14063563 MsG0180000982.01.T01:CDS 65.0%
!! GCTCCGCTTGCTGTGGCTGG+AGG + Chr1:14063551-14063570 MsG0180000982.01.T01:CDS 70.0%
!! GGGGCTCCGCTTGCTGTGGC+TGG + Chr1:14063548-14063567 MsG0180000982.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 14061519 14066494 14061519 ID=MsG0180000982.01;Name=MsG0180000982.01
Chr1 mRNA 14061519 14066494 14061519 ID=MsG0180000982.01.T01;Parent=MsG0180000982.01;Name=MsG0180000982.01.T01;_AED=0.37;_eAED=0.37;_QI=215|0.83|0.84|1|0.91|0.84|13|303|371
Chr1 exon 14061519 14061639 14061519 ID=MsG0180000982.01.T01:exon:9627;Parent=MsG0180000982.01.T01
Chr1 exon 14062882 14063152 14062882 ID=MsG0180000982.01.T01:exon:9628;Parent=MsG0180000982.01.T01
Chr1 exon 14063256 14063321 14063256 ID=MsG0180000982.01.T01:exon:9629;Parent=MsG0180000982.01.T01
Chr1 exon 14063503 14063625 14063503 ID=MsG0180000982.01.T01:exon:9630;Parent=MsG0180000982.01.T01
Chr1 exon 14063934 14064035 14063934 ID=MsG0180000982.01.T01:exon:9631;Parent=MsG0180000982.01.T01
Chr1 exon 14064156 14064303 14064156 ID=MsG0180000982.01.T01:exon:9632;Parent=MsG0180000982.01.T01
Chr1 exon 14064619 14064698 14064619 ID=MsG0180000982.01.T01:exon:9633;Parent=MsG0180000982.01.T01
Chr1 exon 14064776 14064847 14064776 ID=MsG0180000982.01.T01:exon:9634;Parent=MsG0180000982.01.T01
Chr1 exon 14065379 14065438 14065379 ID=MsG0180000982.01.T01:exon:9635;Parent=MsG0180000982.01.T01
Chr1 exon 14065526 14065622 14065526 ID=MsG0180000982.01.T01:exon:9636;Parent=MsG0180000982.01.T01
Chr1 exon 14065839 14065902 14065839 ID=MsG0180000982.01.T01:exon:9637;Parent=MsG0180000982.01.T01
Chr1 exon 14065977 14066036 14065977 ID=MsG0180000982.01.T01:exon:9638;Parent=MsG0180000982.01.T01
Chr1 exon 14066125 14066494 14066125 ID=MsG0180000982.01.T01:exon:9639;Parent=MsG0180000982.01.T01
Chr1 five_prime_UTR 14061519 14061639 14061519 ID=MsG0180000982.01.T01:five_prime_utr;Parent=MsG0180000982.01.T01
Chr1 five_prime_UTR 14062882 14062975 14062882 ID=MsG0180000982.01.T01:five_prime_utr;Parent=MsG0180000982.01.T01
Chr1 CDS 14062976 14063152 14062976 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14063256 14063321 14063256 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14063503 14063625 14063503 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14063934 14064035 14063934 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14064156 14064303 14064156 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14064619 14064698 14064619 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14064776 14064847 14064776 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14065379 14065438 14065379 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14065526 14065622 14065526 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14065839 14065902 14065839 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14065977 14066036 14065977 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 CDS 14066125 14066191 14066125 ID=MsG0180000982.01.T01:cds;Parent=MsG0180000982.01.T01
Chr1 three_prime_UTR 14066192 14066494 14066192 ID=MsG0180000982.01.T01:three_prime_utr;Parent=MsG0180000982.01.T01
Gene Sequence

>MsG0180000982.01.T01

ATGAAGTTGTTTAGTTTGGGAACTGAACCAGTGGTCGGTAACTTGAATTCTTCAAGGAAGAAAGAGTATAGAGTCACCAATCGCCTCCAAGAGGGCAAGCGTCCTCTATATGCTGTTGTTTTCAACTTCATCGACTCCCGCTACTTCAACGTTTTCGCCACAGTTGGTGGCAATCGGGTTACTATTTATCAATGCCTTCAAGGAGGAGTTATTGCTGTATTGCAGTCTTTTGTAGATGATGATAAGGATGAATCTTTTTATACAGTAAGCTGGGCATGCAATACCAATGGGGCTCCGCTTGCTGTGGCTGGAGGAGTCAATGGTATAATTCGAGTCATTAATGGTAGCGATGAGAAGTTACACAAGGTTGACCAGGATGAGTCGGTTCGGTTATGGAATGTTCACACTGGAGTATGTGTTTTGATATTTGCTGGAGCTGGAGGACACCGTAATGAAGTCTTAAGTATTGATTTTCATCCATCAGATATATTTAAGATTGCCAGTTGTGGCATGGATAATACTGTTAAGATATGGTCTATGAAGGGTGAGGCGTTTAGTTTTATGTCGGCTGCTATTATTCCATTGGTTGCTTTTGTTTATCCTGATATATCTTATAATTTCTGGGGCTATGTAGAACAATCATTCACATGGACAGATATCCCTTCTAAGTTTCCCACAAAATACGTGCAGTTTCCTATATTCAATGCTTCTGTTCATACAAATTACGTTGATTGTACTAGATGGTTGGGGGAATTTATCCTCTCAAAGAGTGTTGACCATGAAATTGTCTTGTGGGAACCAAAAGTGAAGGAACAATCTCCGGGGGAGGGCGCAGTCGACATACTTCAGAAGTACCCTGTTCCCGAATGTGATATATGGTTCATCAAATTTTCTTGTGATTTCCATTTCAAGGCATGTGCAATAGGCAACAGGGAAGGGAAGATTTTTCTTTGGGATTTGCAGTCAAGTCCTCCTATTCTTATTGCAAAGTTGGTGCATACTCAATCAAAATCTCCAATCAGGCAAACTGCTCTGTCCCATGATGGAAGTACTATTTTATGTTGCTGCGACGATGGAACAATATGGCGCTGGGATGATGCAAACTCCGAAGCTTAA

Protein sequence

>MsG0180000982.01.T01

MKLFSLGTEPVVGNLNSSRKKEYRVTNRLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTIYQCLQGGVIAVLQSFVDDDKDESFYTVSWACNTNGAPLAVAGGVNGIIRVINGSDEKLHKVDQDESVRLWNVHTGVCVLIFAGAGGHRNEVLSIDFHPSDIFKIASCGMDNTVKIWSMKGEAFSFMSAAIIPLVAFVYPDISYNFWGYVEQSFTWTDIPSKFPTKYVQFPIFNASVHTNYVDCTRWLGEFILSKSVDHEIVLWEPKVKEQSPGEGAVDILQKYPVPECDIWFIKFSCDFHFKACAIGNREGKIFLWDLQSSPPILIAKLVHTQSKSPIRQTALSHDGSTILCCCDDGTIWRWDDANSEA*