Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008936.01.T01 | KEH16922.1 | 95.402 | 87 | 3 | 1 | 1 | 87 | 1 | 86 | 2.67E-52 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008936.01.T01 | Q84N34 | 51.19 | 84 | 35 | 1 | 1 | 78 | 19 | 102 | 3.04E-24 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008936.01.T01 | A0A072THN2 | 95.402 | 87 | 3 | 1 | 1 | 87 | 1 | 86 | 1.28e-52 | 169 |
| MsG0280008936.01.T01 | A0A396JFZ6 | 95.402 | 87 | 3 | 1 | 1 | 87 | 1 | 86 | 2.86e-50 | 170 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048769.01 | MsG0280008936.01 | 0.810179 | 1.310944e-50 | 7.848321e-48 |
| MsG0180000155.01 | MsG0280008936.01 | 0.804005 | 2.659056e-49 | 1.355868e-46 |
| MsG0180000205.01 | MsG0280008936.01 | 0.813970 | 1.954751e-51 | 1.295059e-48 |
| MsG0180000982.01 | MsG0280008936.01 | 0.831038 | 2.093373e-55 | 2.244799e-52 |
| MsG0180001886.01 | MsG0280008936.01 | 0.837476 | 5.081883e-57 | 6.609485e-54 |
| MsG0180002492.01 | MsG0280008936.01 | 0.807016 | 6.210914e-50 | 3.421572e-47 |
| MsG0180003572.01 | MsG0280008936.01 | 0.828254 | 9.958387e-55 | 9.844932e-52 |
| MsG0180004996.01 | MsG0280008936.01 | 0.832527 | 8.984521e-56 | 1.006870e-52 |
| MsG0180005398.01 | MsG0280008936.01 | 0.801293 | 9.643170e-49 | 4.588437e-46 |
| MsG0180005575.01 | MsG0280008936.01 | 0.803829 | 2.891439e-49 | 1.467720e-46 |
| MsG0180005990.01 | MsG0280008936.01 | 0.800001 | 1.768366e-48 | 8.143151e-46 |
| MsG0280007153.01 | MsG0280008936.01 | 0.812415 | 4.288658e-51 | 2.725286e-48 |
| MsG0280007955.01 | MsG0280008936.01 | 0.802994 | 4.306583e-49 | 2.139560e-46 |
| MsG0280007992.01 | MsG0280008936.01 | 0.811968 | 5.368644e-51 | 3.370266e-48 |
| MsG0280008417.01 | MsG0280008936.01 | 0.821235 | 4.497846e-53 | 3.638652e-50 |
| MsG0280008457.01 | MsG0280008936.01 | 0.804717 | 1.888977e-49 | 9.810448e-47 |
| MsG0280008936.01 | MsG0280009024.01 | 0.800944 | 1.136149e-48 | 5.358828e-46 |
| MsG0280008936.01 | MsG0280009054.01 | 0.828531 | 8.534749e-55 | 8.506402e-52 |
| MsG0280008936.01 | MsG0280009739.01 | 0.818068 | 2.376472e-52 | 1.760768e-49 |
| MsG0280008936.01 | MsG0280010177.01 | 0.819317 | 1.237285e-52 | 9.488459e-50 |
| MsG0280008936.01 | MsG0280010595.01 | 0.802201 | 6.278165e-49 | 3.056673e-46 |
| MsG0280008936.01 | MsG0280010702.01 | 0.814575 | 1.436742e-51 | 9.676319e-49 |
| MsG0280008936.01 | MsG0380011537.01 | 0.810051 | 1.396937e-50 | 8.335632e-48 |
| MsG0280008936.01 | MsG0380011669.01 | 0.802379 | 5.769440e-49 | 2.822075e-46 |
| MsG0280008936.01 | MsG0380011671.01 | 0.803813 | 2.914679e-49 | 1.478879e-46 |
| MsG0280008936.01 | MsG0380015701.01 | 0.822091 | 2.851724e-53 | 2.363242e-50 |
| MsG0280008936.01 | MsG0380016133.01 | 0.804374 | 2.227170e-49 | 1.146472e-46 |
| MsG0280008936.01 | MsG0380016624.01 | 0.805718 | 1.165954e-49 | 6.213472e-47 |
| MsG0280008936.01 | MsG0380016860.01 | 0.805117 | 1.558193e-49 | 8.176105e-47 |
| MsG0280008936.01 | MsG0380016923.01 | 0.814717 | 1.336537e-51 | 9.035886e-49 |
| MsG0280008936.01 | MsG0380016970.01 | 0.808881 | 2.490185e-50 | 1.440406e-47 |
| MsG0280008936.01 | MsG0380017039.01 | 0.828189 | 1.032166e-54 | 1.018543e-51 |
| MsG0280008936.01 | MsG0380017351.01 | 0.800452 | 1.431781e-48 | 6.669085e-46 |
| MsG0280008936.01 | MsG0480018479.01 | 0.816820 | 4.541544e-52 | 3.251834e-49 |
| MsG0280008936.01 | MsG0480019434.01 | 0.806350 | 8.583999e-50 | 4.648663e-47 |
| MsG0280008936.01 | MsG0480019562.01 | 0.806551 | 7.785957e-50 | 4.238334e-47 |
| MsG0280008936.01 | MsG0480020675.01 | 0.801436 | 9.013143e-49 | 4.304101e-46 |
| MsG0280008936.01 | MsG0480021195.01 | 0.803023 | 4.248225e-49 | 2.112109e-46 |
| MsG0280008936.01 | MsG0480021452.01 | 0.806871 | 6.664561e-50 | 3.657804e-47 |
| MsG0280008936.01 | MsG0480021464.01 | 0.803127 | 4.042255e-49 | 2.015128e-46 |
| MsG0280008936.01 | MsG0480021465.01 | 0.803678 | 3.108043e-49 | 1.571484e-46 |
| MsG0280008936.01 | MsG0480021917.01 | 0.803147 | 4.004416e-49 | 1.997311e-46 |
| MsG0280008936.01 | MsG0480022164.01 | 0.804100 | 2.539611e-49 | 1.298138e-46 |
| MsG0280008936.01 | MsG0480022207.01 | 0.814205 | 1.734142e-51 | 1.156239e-48 |
| MsG0280008936.01 | MsG0480022223.01 | 0.810147 | 1.332149e-50 | 7.968704e-48 |
| MsG0280008936.01 | MsG0480023356.01 | 0.806362 | 8.536595e-50 | 4.624303e-47 |
| MsG0280008936.01 | MsG0480023994.01 | 0.801924 | 7.155813e-49 | 3.459678e-46 |
| MsG0280008936.01 | MsG0580024339.01 | 0.805042 | 1.615365e-49 | 8.459751e-47 |
| MsG0280008936.01 | MsG0580024653.01 | 0.801428 | 9.046127e-49 | 4.318984e-46 |
| MsG0280008936.01 | MsG0580024727.01 | 0.812055 | 5.140168e-51 | 3.234365e-48 |
| MsG0280008936.01 | MsG0580025756.01 | 0.812698 | 3.719205e-51 | 2.381029e-48 |
| MsG0280008936.01 | MsG0580026301.01 | 0.801779 | 7.666549e-49 | 3.692856e-46 |
| MsG0280008936.01 | MsG0580026485.01 | 0.828411 | 9.123954e-55 | 9.062149e-52 |
| MsG0280008936.01 | MsG0580026718.01 | 0.840533 | 8.210538e-58 | 1.172964e-54 |
| MsG0280008936.01 | MsG0580027228.01 | 0.810054 | 1.394809e-50 | 8.323539e-48 |
| MsG0280008936.01 | MsG0580027605.01 | 0.820878 | 5.435551e-53 | 4.353935e-50 |
| MsG0280008936.01 | MsG0580027925.01 | 0.806926 | 6.488021e-50 | 3.565931e-47 |
| MsG0280008936.01 | MsG0580029924.01 | 0.812308 | 4.526815e-51 | 2.868164e-48 |
| MsG0280008936.01 | MsG0680030839.01 | 0.814646 | 1.385869e-51 | 9.351530e-49 |
| MsG0280008936.01 | MsG0680031468.01 | 0.828775 | 7.454697e-55 | 7.482041e-52 |
| MsG0280008936.01 | MsG0680034913.01 | 0.815585 | 8.574636e-52 | 5.935634e-49 |
| MsG0280008936.01 | MsG0680035346.01 | 0.813650 | 2.299228e-51 | 1.510174e-48 |
| MsG0280008936.01 | MsG0680035475.01 | 0.804033 | 2.622666e-49 | 1.338298e-46 |
| MsG0280008936.01 | MsG0780038603.01 | 0.808286 | 3.336878e-50 | 1.900405e-47 |
| MsG0280008936.01 | MsG0780039144.01 | 0.810678 | 1.023016e-50 | 6.206370e-48 |
| MsG0280008936.01 | MsG0780039423.01 | 0.828640 | 8.032982e-55 | 8.031547e-52 |
| MsG0280008936.01 | MsG0780039443.01 | 0.809979 | 1.447887e-50 | 8.623570e-48 |
| MsG0280008936.01 | MsG0780040545.01 | 0.822300 | 2.550574e-53 | 2.126521e-50 |
| MsG0280008936.01 | MsG0880042065.01 | 0.837318 | 5.578822e-57 | 7.219656e-54 |
| MsG0280008936.01 | MsG0880042857.01 | 0.824556 | 7.572480e-54 | 6.730556e-51 |
| MsG0280008936.01 | MsG0880043816.01 | 0.819103 | 1.384764e-52 | 1.055763e-49 |
| MsG0280008936.01 | MsG0880044415.01 | 0.811476 | 6.869439e-51 | 4.256599e-48 |
| MsG0280008936.01 | MsG0880044975.01 | 0.822610 | 2.160946e-53 | 1.817844e-50 |
| MsG0280008936.01 | MsG0880045145.01 | 0.805516 | 1.285413e-49 | 6.813959e-47 |
| MsG0280008936.01 | MsG0880045613.01 | 0.802734 | 4.874030e-49 | 2.405720e-46 |
| MsG0280008936.01 | MsG0880045965.01 | 0.807285 | 5.447751e-50 | 3.022321e-47 |
| MsG0280008936.01 | MsG0880046517.01 | 0.801134 | 1.038874e-48 | 4.923703e-46 |
| MsG0280008936.01 | MsG0880046901.01 | 0.805844 | 1.096839e-49 | 5.863906e-47 |
| MsG0280008936.01 | MsG0880047046.01 | 0.802784 | 4.760528e-49 | 2.352663e-46 |
| MsG0280008936.01 | MsG0880047391.01 | 0.819186 | 1.325421e-52 | 1.012812e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008936.01.T01 | MTR_0066s0040 | 95.402 | 87 | 3 | 1 | 1 | 87 | 1 | 86 | 3.23e-56 | 169 |
| MsG0280008936.01.T01 | MTR_4g115580 | 56.061 | 66 | 29 | 0 | 4 | 69 | 38 | 103 | 6.92e-23 | 90.1 |
| MsG0280008936.01.T01 | MTR_5g015270 | 52.941 | 68 | 32 | 0 | 7 | 74 | 28 | 95 | 6.67e-20 | 82.0 |
| MsG0280008936.01.T01 | MTR_5g015270 | 52.941 | 68 | 32 | 0 | 7 | 74 | 28 | 95 | 7.58e-20 | 82.0 |
| MsG0280008936.01.T01 | MTR_3g103240 | 58.929 | 56 | 23 | 0 | 7 | 62 | 32 | 87 | 1.78e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280008936.01.T01 | AT4G30850 | 51.190 | 84 | 35 | 1 | 1 | 78 | 19 | 102 | 3.10e-25 | 96.3 |
| MsG0280008936.01.T01 | AT4G30850 | 51.190 | 84 | 35 | 1 | 1 | 78 | 19 | 102 | 3.10e-25 | 96.3 |
| MsG0280008936.01.T01 | AT2G24150 | 67.241 | 58 | 19 | 0 | 12 | 69 | 33 | 90 | 2.66e-24 | 94.0 |
| MsG0280008936.01.T01 | AT5G20270 | 57.353 | 68 | 29 | 0 | 2 | 69 | 45 | 112 | 3.87e-24 | 93.2 |
| MsG0280008936.01.T01 | AT4G38320 | 50.000 | 78 | 34 | 1 | 2 | 74 | 23 | 100 | 6.71e-20 | 82.0 |
| MsG0280008936.01.T01 | AT4G37680 | 50.000 | 78 | 34 | 1 | 2 | 74 | 23 | 100 | 9.76e-20 | 81.6 |
| MsG0280008936.01.T01 | AT4G37680 | 50.000 | 78 | 34 | 1 | 2 | 74 | 23 | 100 | 9.76e-20 | 81.6 |
| MsG0280008936.01.T01 | AT4G37680 | 50.000 | 78 | 34 | 1 | 2 | 74 | 23 | 100 | 9.76e-20 | 81.6 |
| MsG0280008936.01.T01 | AT4G37680 | 50.000 | 78 | 34 | 1 | 2 | 74 | 28 | 105 | 1.07e-19 | 81.6 |
| MsG0280008936.01.T01 | AT4G37680 | 50.000 | 78 | 34 | 1 | 2 | 74 | 28 | 105 | 1.07e-19 | 81.6 |
Find 29 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTCTTGTACAGTCATT+TGG | 0.300362 | 2:-41812753 | MsG0280008936.01.T01:intron |
| TTGTTCTTGTACAGTCATTT+GGG | 0.334474 | 2:-41812752 | MsG0280008936.01.T01:intron |
| AAAAGACAACGAGTTCATAT+TGG | 0.344022 | 2:-41812925 | MsG0280008936.01.T01:CDS |
| GCGATGGCGGCGACGGAAGC+TGG | 0.345791 | 2:-41812710 | MsG0280008936.01.T01:CDS |
| AGTTCATATTGGATTATTAC+CGG | 0.383152 | 2:-41812914 | MsG0280008936.01.T01:CDS |
| AAAACGAAACGAAGGAATAA+AGG | 0.389374 | 2:-41813102 | None:intergenic |
| TGGATTATTACCGGTCGAAA+TGG | 0.399066 | 2:-41812905 | MsG0280008936.01.T01:CDS |
| GCGACGGAAGCTGGAGGAGG+AGG | 0.408012 | 2:-41812701 | MsG0280008936.01.T01:CDS |
| ACAACGAAACGCTAAATGTT+TGG | 0.429326 | 2:-41812845 | MsG0280008936.01.T01:CDS |
| GGTGAAATACGAGGAATTGC+CGG | 0.439654 | 2:-41812955 | MsG0280008936.01.T01:CDS |
| ACGGAAGCTGGAGGAGGAGG+AGG | 0.442291 | 2:-41812698 | MsG0280008936.01.T01:CDS |
| GGAATAAAGGTGCAAGCGAC+GGG | 0.459408 | 2:-41813089 | MsG0280008936.01.T01:five_prime_UTR |
| CGAATATGAAGGGTAATTAT+CGG | 0.467352 | 2:-41812998 | MsG0280008936.01.T01:exon |
| CCGGTCGAAATGGTCGGTTA+AGG | 0.472175 | 2:-41812895 | MsG0280008936.01.T01:CDS |
| GCGGCGACGGAAGCTGGAGG+AGG | 0.486075 | 2:-41812704 | MsG0280008936.01.T01:CDS |
| TTTAATATTTGCAGCGATGG+CGG | 0.490595 | 2:-41812723 | MsG0280008936.01.T01:CDS |
| GAAGCTGGAGGAGGAGGAGG+TGG | 0.496794 | 2:-41812695 | MsG0280008936.01.T01:CDS |
| AGGAATAAAGGTGCAAGCGA+CGG | 0.501490 | 2:-41813090 | MsG0280008936.01.T01:five_prime_UTR |
| ATTTGCAGCGATGGCGGCGA+CGG | 0.523006 | 2:-41812717 | MsG0280008936.01.T01:CDS |
| GCGGAAGAGAACGTCGCGAT+TGG | 0.526186 | 2:-41812976 | MsG0280008936.01.T01:CDS |
| GATAATATAAATTTAATCGC+CGG | 0.534759 | 2:-41813048 | MsG0280008936.01.T01:five_prime_UTR |
| TAATTACCCTTCATATTCGC+CGG | 0.541667 | 2:+41813002 | None:intergenic |
| TTATTACCGGTCGAAATGGT+CGG | 0.550345 | 2:-41812901 | MsG0280008936.01.T01:CDS |
| TTCTTGTACAGTCATTTGGG+AGG | 0.573521 | 2:-41812749 | MsG0280008936.01.T01:intron |
| TAAAGGTGCAAGCGACGGGA+AGG | 0.593094 | 2:-41813085 | MsG0280008936.01.T01:five_prime_UTR |
| CCTTAACCGACCATTTCGAC+CGG | 0.620356 | 2:+41812895 | None:intergenic |
| ATGGCGGCGACGGAAGCTGG+AGG | 0.636720 | 2:-41812707 | MsG0280008936.01.T01:CDS |
| ATATGAAGGGTAATTATCGG+CGG | 0.702822 | 2:-41812995 | MsG0280008936.01.T01:CDS |
| GTCGCGATTGGTGAAATACG+AGG | 0.714635 | 2:-41812964 | MsG0280008936.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTATTGCTAAAATCTTAA+CGG | + | Chr2:41812953-41812972 | None:intergenic | 20.0% |
| !! | GATAATATAAATTTAATCGC+CGG | - | Chr2:41812710-41812729 | MsG0280008936.01.T01:CDS | 20.0% |
| ! | AGTTCATATTGGATTATTAC+CGG | - | Chr2:41812844-41812863 | MsG0280008936.01.T01:CDS | 25.0% |
| !! | CGAAAAAAGAAAAGATTTTC+CGG | - | Chr2:41812737-41812756 | MsG0280008936.01.T01:CDS | 25.0% |
| !!! | TCTTTTCTTTTTTCGTTTTC+CGG | + | Chr2:41812732-41812751 | None:intergenic | 25.0% |
| AAAAGACAACGAGTTCATAT+TGG | - | Chr2:41812833-41812852 | MsG0280008936.01.T01:intron | 30.0% | |
| CGAATATGAAGGGTAATTAT+CGG | - | Chr2:41812760-41812779 | MsG0280008936.01.T01:intron | 30.0% | |
| TTGTTCTTGTACAGTCATTT+GGG | - | Chr2:41813006-41813025 | MsG0280008936.01.T01:exon | 30.0% | |
| ! | CTTTTTAATATTTGCAGCGA+TGG | - | Chr2:41813032-41813051 | MsG0280008936.01.T01:five_prime_UTR | 30.0% |
| ! | GTTTTCTGTCTAATATCTAC+AGG | - | Chr2:41813085-41813104 | MsG0280008936.01.T01:five_prime_UTR | 30.0% |
| ! | TCGTTGTCTTTTAGATATTC+CGG | + | Chr2:41812825-41812844 | None:intergenic | 30.0% |
| AACAACAACGATGTCAAACA+TGG | + | Chr2:41812988-41813007 | None:intergenic | 35.0% | |
| ACAACGAAACGCTAAATGTT+TGG | - | Chr2:41812913-41812932 | MsG0280008936.01.T01:CDS | 35.0% | |
| ATATGAAGGGTAATTATCGG+CGG | - | Chr2:41812763-41812782 | MsG0280008936.01.T01:intron | 35.0% | |
| GTTGTTCTTGTACAGTCATT+TGG | - | Chr2:41813005-41813024 | MsG0280008936.01.T01:exon | 35.0% | |
| TAATTACCCTTCATATTCGC+CGG | + | Chr2:41812759-41812778 | None:intergenic | 35.0% | |
| TTTAATATTTGCAGCGATGG+CGG | - | Chr2:41813035-41813054 | MsG0280008936.01.T01:five_prime_UTR | 35.0% | |
| TGGATTATTACCGGTCGAAA+TGG | - | Chr2:41812853-41812872 | MsG0280008936.01.T01:CDS | 40.0% | |
| TTATTACCGGTCGAAATGGT+CGG | - | Chr2:41812857-41812876 | MsG0280008936.01.T01:CDS | 40.0% | |
| TTCTTGTACAGTCATTTGGG+AGG | - | Chr2:41813009-41813028 | MsG0280008936.01.T01:exon | 40.0% | |
| ! | AGATTTTCCGGCGAATATGA+AGG | - | Chr2:41812749-41812768 | MsG0280008936.01.T01:intron | 40.0% |
| ! | GATTTTCCGGCGAATATGAA+GGG | - | Chr2:41812750-41812769 | MsG0280008936.01.T01:intron | 40.0% |
| GGTGAAATACGAGGAATTGC+CGG | - | Chr2:41812803-41812822 | MsG0280008936.01.T01:intron | 45.0% | |
| ! | AGGAATAAAGGTGCAAGCGA+CGG | - | Chr2:41812668-41812687 | MsG0280008936.01.T01:CDS | 45.0% |
| CCTTAACCGACCATTTCGAC+CGG | + | Chr2:41812866-41812885 | None:intergenic | 50.0% | |
| GTCGCGATTGGTGAAATACG+AGG | - | Chr2:41812794-41812813 | MsG0280008936.01.T01:intron | 50.0% | |
| ! | CTTTGTTCAGCGTTTTCGCG+TGG | - | Chr2:41812889-41812908 | MsG0280008936.01.T01:CDS | 50.0% |
| ! | GGAATAAAGGTGCAAGCGAC+GGG | - | Chr2:41812669-41812688 | MsG0280008936.01.T01:CDS | 50.0% |
| CCGGTCGAAATGGTCGGTTA+AGG | - | Chr2:41812863-41812882 | MsG0280008936.01.T01:CDS | 55.0% | |
| ! | TAAAGGTGCAAGCGACGGGA+AGG | - | Chr2:41812673-41812692 | MsG0280008936.01.T01:CDS | 55.0% |
| GCGGAAGAGAACGTCGCGAT+TGG | - | Chr2:41812782-41812801 | MsG0280008936.01.T01:intron | 60.0% | |
| ! | ATTTGCAGCGATGGCGGCGA+CGG | - | Chr2:41813041-41813060 | MsG0280008936.01.T01:five_prime_UTR | 60.0% |
| ACGGAAGCTGGAGGAGGAGG+AGG | - | Chr2:41813060-41813079 | MsG0280008936.01.T01:five_prime_UTR | 65.0% | |
| GAAGCTGGAGGAGGAGGAGG+TGG | - | Chr2:41813063-41813082 | MsG0280008936.01.T01:five_prime_UTR | 65.0% | |
| ATGGCGGCGACGGAAGCTGG+AGG | - | Chr2:41813051-41813070 | MsG0280008936.01.T01:five_prime_UTR | 70.0% | |
| GCGACGGAAGCTGGAGGAGG+AGG | - | Chr2:41813057-41813076 | MsG0280008936.01.T01:five_prime_UTR | 70.0% | |
| GCGGCGACGGAAGCTGGAGG+AGG | - | Chr2:41813054-41813073 | MsG0280008936.01.T01:five_prime_UTR | 75.0% | |
| ! | GCGATGGCGGCGACGGAAGC+TGG | - | Chr2:41813048-41813067 | MsG0280008936.01.T01:five_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 41812667 | 41813113 | 41812667 | ID=MsG0280008936.01;Name=MsG0280008936.01 |
| Chr2 | mRNA | 41812667 | 41813113 | 41812667 | ID=MsG0280008936.01.T01;Parent=MsG0280008936.01;Name=MsG0280008936.01.T01;_AED=0.49;_eAED=0.50;_QI=98|1|0.5|1|0|0|2|0|88 |
| Chr2 | exon | 41812843 | 41813113 | 41812843 | ID=MsG0280008936.01.T01:exon:29594;Parent=MsG0280008936.01.T01 |
| Chr2 | exon | 41812667 | 41812760 | 41812667 | ID=MsG0280008936.01.T01:exon:29595;Parent=MsG0280008936.01.T01 |
| Chr2 | five_prime_UTR | 41813016 | 41813113 | 41813016 | ID=MsG0280008936.01.T01:five_prime_utr;Parent=MsG0280008936.01.T01 |
| Chr2 | CDS | 41812843 | 41813015 | 41812843 | ID=MsG0280008936.01.T01:cds;Parent=MsG0280008936.01.T01 |
| Chr2 | CDS | 41812667 | 41812760 | 41812667 | ID=MsG0280008936.01.T01:cds;Parent=MsG0280008936.01.T01 |
| Gene Sequence |
| Protein sequence |
