AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027925.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027925.01.T01 MTR_5g065440 96.654 269 6 2 1 267 1 268 0.0 535
MsG0580027925.01.T01 MTR_3g100650 59.794 291 76 7 1 267 1 274 1.30e-96 285
MsG0580027925.01.T01 MTR_5g032600 52.294 218 74 7 58 267 77 272 2.58e-56 182
MsG0580027925.01.T01 MTR_4g134580 41.700 247 94 6 58 266 112 346 8.49e-51 170
MsG0580027925.01.T01 MTR_1g077020 41.509 212 92 5 56 266 6 186 9.06e-48 157
MsG0580027925.01.T01 MTR_2g076780 41.038 212 109 4 59 266 37 236 8.98e-47 156
MsG0580027925.01.T01 MTR_7g010300 40.724 221 98 6 56 266 85 282 1.78e-44 153
MsG0580027925.01.T01 MTR_5g020510 39.819 221 106 6 54 266 94 295 5.26e-44 151
MsG0580027925.01.T01 MTR_8g069080 42.326 215 103 7 58 266 68 267 1.46e-43 149
MsG0580027925.01.T01 MTR_6g012280 42.857 210 102 5 59 266 91 284 1.26e-40 143
MsG0580027925.01.T01 MTR_7g070643 80.263 76 12 1 22 97 48 120 2.45e-35 125
MsG0580027925.01.T01 MTR_6g080300 86.885 61 8 0 37 97 32 92 2.18e-31 112
MsG0580027925.01.T01 MTR_8g069380 47.872 94 49 0 174 267 22 115 3.49e-22 89.0
MsG0580027925.01.T01 MTR_8g051480 54.667 75 33 1 192 266 55 128 1.85e-20 84.7
MsG0580027925.01.T01 MTR_3g039810 57.534 73 24 2 57 129 18 83 2.07e-20 83.6
MsG0580027925.01.T01 MTR_6g073013 53.333 60 27 1 204 262 101 160 1.95e-16 75.5
MsG0580027925.01.T01 MTR_6g073013 56.000 50 21 1 59 107 19 68 1.82e-11 62.0
MsG0580027925.01.T01 MTR_6g012220 56.604 53 19 1 55 107 17 65 6.47e-13 63.2
MsG0580027925.01.T01 MTR_2g007810 100.000 29 0 0 69 97 19 47 7.64e-13 63.5
MsG0580027925.01.T01 MTR_8g467340 54.545 55 23 1 56 108 61 115 1.46e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027925.01.T01 AT4G24660 48.289 263 88 7 7 267 4 220 2.38e-65 203
MsG0580027925.01.T01 AT4G24660 47.893 261 84 8 7 263 4 216 3.28e-62 196
MsG0580027925.01.T01 AT2G02540 38.868 265 123 7 18 266 43 284 3.76e-58 188
MsG0580027925.01.T01 AT2G02540 38.868 265 123 7 18 266 43 284 3.76e-58 188
MsG0580027925.01.T01 AT1G14440 40.566 212 105 3 57 266 88 280 6.63e-52 172
MsG0580027925.01.T01 AT1G14440 40.566 212 105 3 57 266 88 280 6.63e-52 172
MsG0580027925.01.T01 AT5G65410 43.439 221 90 3 50 267 66 254 3.63e-50 166
MsG0580027925.01.T01 AT2G18350 41.981 212 90 4 57 266 80 260 2.22e-47 159
MsG0580027925.01.T01 AT1G75240 40.693 231 118 2 56 267 73 303 7.73e-47 159
MsG0580027925.01.T01 AT3G50890 40.566 212 94 3 58 265 59 242 1.59e-43 148
MsG0580027925.01.T01 AT1G69600 40.376 213 95 5 57 263 29 215 5.99e-38 134
MsG0580027925.01.T01 AT5G15210 36.530 219 93 5 54 260 51 235 9.45e-37 131
MsG0580027925.01.T01 AT5G39760 36.667 210 128 2 59 266 56 262 1.02e-35 130
MsG0580027925.01.T01 AT3G28920 36.916 214 116 4 57 263 50 251 3.10e-35 128
MsG0580027925.01.T01 AT5G60480 38.164 207 89 7 56 260 34 203 1.07e-30 114
MsG0580027925.01.T01 AT1G74660 67.647 68 20 1 55 122 35 100 1.53e-24 94.7
MsG0580027925.01.T01 AT1G74660 70.492 61 18 0 55 115 35 95 1.63e-24 94.7
MsG0580027925.01.T01 AT3G28917 65.217 69 21 2 56 123 30 96 1.30e-23 92.4
MsG0580027925.01.T01 AT1G18835 63.793 58 18 1 57 114 24 78 5.30e-19 79.7
MsG0580027925.01.T01 AT5G42780 36.232 69 44 0 195 263 170 238 7.22e-11 61.2
MsG0580027925.01.T01 AT5G42780 57.692 52 18 2 59 109 64 112 7.36e-11 61.2

Find 78 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCACTGGTGTTTGTGTTTC+TGG 0.083748 5:-71184080 None:intergenic
AGAGAAATGTTCTTAAAGTT+TGG 0.256503 5:+71184777 MsG0580027925.01.T01:CDS
GGTGGTGGTGGTAGCGGTGG+TGG 0.325308 5:+71184614 MsG0580027925.01.T01:CDS
GCTCTCCCAGCTGCTGCTTC+CGG 0.345337 5:+71184533 MsG0580027925.01.T01:CDS
CCAGCTGCTGCTTCCGGTGG+TGG 0.345351 5:+71184539 MsG0580027925.01.T01:CDS
TCTCTTTGCGGTGGAAGTTC+CGG 0.377003 5:-71184337 None:intergenic
CCACCACCGGAAGCAGCAGC+TGG 0.399304 5:-71184539 None:intergenic
GTGGAGGCGGTGGCTGTGAC+CGG 0.427229 5:-71184388 None:intergenic
AAGAATCACGCCGTTAGCTT+CGG 0.428386 5:+71184224 MsG0580027925.01.T01:CDS
TTTATCGCTGCCGGTGAAGA+AGG 0.429195 5:+71184275 MsG0580027925.01.T01:CDS
GGTGGTGGTAGCGGTGGTGG+TGG 0.439608 5:+71184617 MsG0580027925.01.T01:CDS
AGTAGCGGTGGAGGTGGTGG+TGG 0.442408 5:+71184599 MsG0580027925.01.T01:CDS
AGCAGTAGCGGTGGAGGTGG+TGG 0.444551 5:+71184596 MsG0580027925.01.T01:CDS
TTCGGTGGCCATGCTGTTGA+CGG 0.447816 5:+71184242 MsG0580027925.01.T01:CDS
CACAATAACAAGAACACTCT+TGG 0.453033 5:+71184803 MsG0580027925.01.T01:CDS
GGAGGAGCACGGTGGTAGTA+AGG 0.453304 5:-71184446 None:intergenic
CGTGATTCTTCTGACATTCT+CGG 0.457636 5:-71184211 None:intergenic
GGAACAGAAAGAGAAGTTGC+TGG 0.466315 5:+71184673 MsG0580027925.01.T01:CDS
TGATGATATTGCGGCGGTGG+AGG 0.476230 5:-71184404 None:intergenic
AGCGGTGGAGGTGGTGGTGG+TGG 0.477596 5:+71184602 MsG0580027925.01.T01:CDS
TGATATTGCGGCGGTGGAGG+CGG 0.481442 5:-71184401 None:intergenic
AAACTCACCGTTGGAGTTGA+CGG 0.483943 5:+71184143 MsG0580027925.01.T01:CDS
GTAGCGGTGGTGGTGGATCA+AGG 0.485672 5:+71184624 MsG0580027925.01.T01:CDS
CCACCTCCACCGCTACTGCT+AGG 0.486199 5:-71184593 None:intergenic
AAACGGTTAGTTCATGTAAC+CGG 0.491216 5:+71184369 MsG0580027925.01.T01:CDS
TTTCACCATCGATCTCTTTG+CGG 0.492117 5:-71184349 None:intergenic
AACGGTCTGTGATGTGCCAC+CGG 0.497928 5:-71184509 None:intergenic
CAAAGAGATCGATGGTGAAA+CGG 0.499742 5:+71184352 MsG0580027925.01.T01:CDS
ATGATGGTGGTGAAGGTAAC+CGG 0.500422 5:-71184477 None:intergenic
TATTGCGGCGGTGGAGGCGG+TGG 0.504014 5:-71184398 None:intergenic
AGAGGAACAAGAAGAGGAGA+TGG 0.506205 5:+71184052 MsG0580027925.01.T01:CDS
TTCAAGTGTTCCTTCTTCAC+CGG 0.506613 5:-71184285 None:intergenic
CGTGCTCCTCCTTCCACAGC+CGG 0.511664 5:+71184458 MsG0580027925.01.T01:CDS
TTCTCTGCTCATTCCACCAC+CGG 0.513977 5:-71184552 None:intergenic
CACCTCCACCGCTACTGCTA+GGG 0.520409 5:-71184592 None:intergenic
AACCCTAGCAGTAGCGGTGG+AGG 0.520715 5:+71184590 MsG0580027925.01.T01:CDS
TGGTGATGATATTGCGGCGG+TGG 0.524405 5:-71184407 None:intergenic
GCGCCGCTTGTAACTGTCAC+CGG 0.526555 5:+71184318 MsG0580027925.01.T01:CDS
CTCCCAGCTGCTGCTTCCGG+TGG 0.526823 5:+71184536 MsG0580027925.01.T01:CDS
CCTAGCAGTAGCGGTGGAGG+TGG 0.532726 5:+71184593 MsG0580027925.01.T01:CDS
AATCACGCCGTTAGCTTCGG+TGG 0.536570 5:+71184227 MsG0580027925.01.T01:CDS
GAGTCATAACTCGTTGGCAC+TGG 0.537593 5:-71184095 None:intergenic
CCACCATCATCTTGCAACTC+CGG 0.539922 5:+71184490 MsG0580027925.01.T01:CDS
GCAGCAGCTGGGAGAGCCAA+CGG 0.545695 5:-71184527 None:intergenic
CACCACCGGAAGCAGCAGCT+GGG 0.547583 5:-71184538 None:intergenic
GTGGTGAAGGTAACCGGCTG+TGG 0.551358 5:-71184471 None:intergenic
TTGCAAGATGATGGTGGTGA+AGG 0.558218 5:-71184484 None:intergenic
CACCATCGATCTCTTTGCGG+TGG 0.563677 5:-71184346 None:intergenic
TGTTGCGAGTTTATCGCTGC+CGG 0.567002 5:+71184266 MsG0580027925.01.T01:CDS
CCACCGGAGTTGCAAGATGA+TGG 0.569041 5:-71184493 None:intergenic
TGAAGGTAACCGGCTGTGGA+AGG 0.577589 5:-71184467 None:intergenic
TCACGTTCAAAACTCACCGT+TGG 0.581295 5:+71184134 MsG0580027925.01.T01:CDS
AATGGAATTTGATGAACAAG+AGG 0.584250 5:+71184034 None:intergenic
ATCTCAAACCCTAGCAGTAG+CGG 0.586840 5:+71184584 MsG0580027925.01.T01:CDS
TTTCCTTCCGTCAACTCCAA+CGG 0.588914 5:-71184150 None:intergenic
TGAACAAGAGGAACAAGAAG+AGG 0.593455 5:+71184046 MsG0580027925.01.T01:CDS
GTTGGAGTTGACGGAAGGAA+AGG 0.610107 5:+71184152 MsG0580027925.01.T01:CDS
CCAACGAGTTATGACTCACT+TGG 0.611073 5:+71184101 MsG0580027925.01.T01:CDS
CGCAACAACCGTCAACAGCA+TGG 0.612162 5:-71184250 None:intergenic
AGGTAACCGGCTGTGGAAGG+AGG 0.612370 5:-71184464 None:intergenic
GGTGGCACATCACAGACCGT+TGG 0.612785 5:+71184511 MsG0580027925.01.T01:CDS
ATTCAGAACAAAATTCACTC+AGG 0.624697 5:+71184652 MsG0580027925.01.T01:CDS
TCAAACCCTAGCAGTAGCGG+TGG 0.634884 5:+71184587 MsG0580027925.01.T01:CDS
GGAAGGAAAGGTAACGGCAA+CGG 0.639375 5:+71184164 MsG0580027925.01.T01:CDS
TCACCGTTGGAGTTGACGGA+AGG 0.640977 5:+71184147 MsG0580027925.01.T01:CDS
CCATCATCTTGCAACTCCGG+TGG 0.641524 5:+71184493 MsG0580027925.01.T01:CDS
CCAAGTGAGTCATAACTCGT+TGG 0.644449 5:-71184101 None:intergenic
TTGCTGTGGTGATGATATTG+CGG 0.650383 5:-71184413 None:intergenic
TTCCACCGCAAAGAGATCGA+TGG 0.654798 5:+71184344 MsG0580027925.01.T01:CDS
GTTGACGGAAGGAAAGGTAA+CGG 0.669388 5:+71184158 MsG0580027925.01.T01:CDS
CGGCTGTGGAAGGAGGAGCA+CGG 0.673027 5:-71184457 None:intergenic
AGCATGGCCACCGAAGCTAA+CGG 0.680090 5:-71184234 None:intergenic
CCGGAGTTGCAAGATGATGG+TGG 0.694873 5:-71184490 None:intergenic
AGGAAAGGTAACGGCAACGG+CGG 0.697533 5:+71184167 MsG0580027925.01.T01:CDS
CTGTGGTGATGATATTGCGG+CGG 0.702018 5:-71184410 None:intergenic
AAGGCGAGAATTGATTGCTG+TGG 0.722344 5:-71184427 None:intergenic
GTTCCGGTGACAGTTACAAG+CGG 0.723013 5:-71184321 None:intergenic
CTGTGGAAGGAGGAGCACGG+TGG 0.754237 5:-71184454 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGAGAAATGTTCTTAAAGTT+TGG + Chr5:71184777-71184796 MsG0580027925.01.T01:CDS 25.0%
ATTCAGAACAAAATTCACTC+AGG + Chr5:71184652-71184671 MsG0580027925.01.T01:CDS 30.0%
CACAATAACAAGAACACTCT+TGG + Chr5:71184803-71184822 MsG0580027925.01.T01:CDS 35.0%
! AAACGGTTAGTTCATGTAAC+CGG + Chr5:71184369-71184388 MsG0580027925.01.T01:CDS 35.0%
CAAAGAGATCGATGGTGAAA+CGG + Chr5:71184352-71184371 MsG0580027925.01.T01:CDS 40.0%
CGTGATTCTTCTGACATTCT+CGG - Chr5:71184214-71184233 None:intergenic 40.0%
TGAACAAGAGGAACAAGAAG+AGG + Chr5:71184046-71184065 MsG0580027925.01.T01:CDS 40.0%
TTCAAGTGTTCCTTCTTCAC+CGG - Chr5:71184288-71184307 None:intergenic 40.0%
TTTCACCATCGATCTCTTTG+CGG - Chr5:71184352-71184371 None:intergenic 40.0%
! CTTTTGCTGAAGAACATGGT+TGG + Chr5:71184696-71184715 MsG0580027925.01.T01:CDS 40.0%
! TTGCTGTGGTGATGATATTG+CGG - Chr5:71184416-71184435 None:intergenic 40.0%
AAACTCACCGTTGGAGTTGA+CGG + Chr5:71184143-71184162 MsG0580027925.01.T01:CDS 45.0%
AAGGCGAGAATTGATTGCTG+TGG - Chr5:71184430-71184449 None:intergenic 45.0%
AGAGGAACAAGAAGAGGAGA+TGG + Chr5:71184052-71184071 MsG0580027925.01.T01:CDS 45.0%
ATCTCAAACCCTAGCAGTAG+CGG + Chr5:71184584-71184603 MsG0580027925.01.T01:CDS 45.0%
CCAACGAGTTATGACTCACT+TGG + Chr5:71184101-71184120 MsG0580027925.01.T01:CDS 45.0%
CCAAGTGAGTCATAACTCGT+TGG - Chr5:71184104-71184123 None:intergenic 45.0%
GGAACAGAAAGAGAAGTTGC+TGG + Chr5:71184673-71184692 MsG0580027925.01.T01:CDS 45.0%
GTTGACGGAAGGAAAGGTAA+CGG + Chr5:71184158-71184177 MsG0580027925.01.T01:CDS 45.0%
TCACGTTCAAAACTCACCGT+TGG + Chr5:71184134-71184153 MsG0580027925.01.T01:CDS 45.0%
TTTCCTTCCGTCAACTCCAA+CGG - Chr5:71184153-71184172 None:intergenic 45.0%
! AAGAATCACGCCGTTAGCTT+CGG + Chr5:71184224-71184243 MsG0580027925.01.T01:CDS 45.0%
!! ATGATGGTGGTGAAGGTAAC+CGG - Chr5:71184480-71184499 None:intergenic 45.0%
!! CTGGCTTTTGCTGAAGAACA+TGG + Chr5:71184692-71184711 MsG0580027925.01.T01:CDS 45.0%
!! TTGCAAGATGATGGTGGTGA+AGG - Chr5:71184487-71184506 None:intergenic 45.0%
CCACCATCATCTTGCAACTC+CGG + Chr5:71184490-71184509 MsG0580027925.01.T01:CDS 50.0%
GAGTCATAACTCGTTGGCAC+TGG - Chr5:71184098-71184117 None:intergenic 50.0%
GTTCCGGTGACAGTTACAAG+CGG - Chr5:71184324-71184343 None:intergenic 50.0%
GTTGGAGTTGACGGAAGGAA+AGG + Chr5:71184152-71184171 MsG0580027925.01.T01:CDS 50.0%
TCTCTTTGCGGTGGAAGTTC+CGG - Chr5:71184340-71184359 None:intergenic 50.0%
TGTTGCGAGTTTATCGCTGC+CGG + Chr5:71184266-71184285 MsG0580027925.01.T01:CDS 50.0%
TTCCACCGCAAAGAGATCGA+TGG + Chr5:71184344-71184363 MsG0580027925.01.T01:CDS 50.0%
TTCTCTGCTCATTCCACCAC+CGG - Chr5:71184555-71184574 None:intergenic 50.0%
TTTATCGCTGCCGGTGAAGA+AGG + Chr5:71184275-71184294 MsG0580027925.01.T01:CDS 50.0%
! CTGTGGTGATGATATTGCGG+CGG - Chr5:71184413-71184432 None:intergenic 50.0%
! GGAAGGAAAGGTAACGGCAA+CGG + Chr5:71184164-71184183 MsG0580027925.01.T01:CDS 50.0%
!! GGCACTGGTGTTTGTGTTTC+TGG - Chr5:71184083-71184102 None:intergenic 50.0%
AACGGTCTGTGATGTGCCAC+CGG - Chr5:71184512-71184531 None:intergenic 55.0%
AGCATGGCCACCGAAGCTAA+CGG - Chr5:71184237-71184256 None:intergenic 55.0%
CACCATCGATCTCTTTGCGG+TGG - Chr5:71184349-71184368 None:intergenic 55.0%
CCACCGGAGTTGCAAGATGA+TGG - Chr5:71184496-71184515 None:intergenic 55.0%
CCATCATCTTGCAACTCCGG+TGG + Chr5:71184493-71184512 MsG0580027925.01.T01:CDS 55.0%
CGCAACAACCGTCAACAGCA+TGG - Chr5:71184253-71184272 None:intergenic 55.0%
TCAAACCCTAGCAGTAGCGG+TGG + Chr5:71184587-71184606 MsG0580027925.01.T01:CDS 55.0%
TCACCGTTGGAGTTGACGGA+AGG + Chr5:71184147-71184166 MsG0580027925.01.T01:CDS 55.0%
TGAAGGTAACCGGCTGTGGA+AGG - Chr5:71184470-71184489 None:intergenic 55.0%
TGATGATATTGCGGCGGTGG+AGG - Chr5:71184407-71184426 None:intergenic 55.0%
TTCGGTGGCCATGCTGTTGA+CGG + Chr5:71184242-71184261 MsG0580027925.01.T01:CDS 55.0%
! AATCACGCCGTTAGCTTCGG+TGG + Chr5:71184227-71184246 MsG0580027925.01.T01:CDS 55.0%
! AGGAAAGGTAACGGCAACGG+CGG + Chr5:71184167-71184186 MsG0580027925.01.T01:CDS 55.0%
! CAACGGCGGTTTTGCTTCGA+CGG + Chr5:71184181-71184200 MsG0580027925.01.T01:CDS 55.0%
! CCGGAGTTGCAAGATGATGG+TGG - Chr5:71184493-71184512 None:intergenic 55.0%
! TGGTGATGATATTGCGGCGG+TGG - Chr5:71184410-71184429 None:intergenic 55.0%
AACCCTAGCAGTAGCGGTGG+AGG + Chr5:71184590-71184609 MsG0580027925.01.T01:CDS 60.0%
AGGTAACCGGCTGTGGAAGG+AGG - Chr5:71184467-71184486 None:intergenic 60.0%
CACCTCCACCGCTACTGCTA+GGG - Chr5:71184595-71184614 None:intergenic 60.0%
GCGCCGCTTGTAACTGTCAC+CGG + Chr5:71184318-71184337 MsG0580027925.01.T01:CDS 60.0%
GGTGGCACATCACAGACCGT+TGG + Chr5:71184511-71184530 MsG0580027925.01.T01:CDS 60.0%
GTGGTGAAGGTAACCGGCTG+TGG - Chr5:71184474-71184493 None:intergenic 60.0%
TGATATTGCGGCGGTGGAGG+CGG - Chr5:71184404-71184423 None:intergenic 60.0%
! GCGGTTTTGCTTCGACGGTG+AGG + Chr5:71184186-71184205 MsG0580027925.01.T01:CDS 60.0%
! GGAGGAGCACGGTGGTAGTA+AGG - Chr5:71184449-71184468 None:intergenic 60.0%
!! GTAGCGGTGGTGGTGGATCA+AGG + Chr5:71184624-71184643 MsG0580027925.01.T01:CDS 60.0%
AGCAGTAGCGGTGGAGGTGG+TGG + Chr5:71184596-71184615 MsG0580027925.01.T01:CDS 65.0%
CACCACCGGAAGCAGCAGCT+GGG - Chr5:71184541-71184560 None:intergenic 65.0%
CCACCTCCACCGCTACTGCT+AGG - Chr5:71184596-71184615 None:intergenic 65.0%
CCTAGCAGTAGCGGTGGAGG+TGG + Chr5:71184593-71184612 MsG0580027925.01.T01:CDS 65.0%
CGGCTGTGGAAGGAGGAGCA+CGG - Chr5:71184460-71184479 None:intergenic 65.0%
CGTGCTCCTCCTTCCACAGC+CGG + Chr5:71184458-71184477 MsG0580027925.01.T01:CDS 65.0%
GCAGCAGCTGGGAGAGCCAA+CGG - Chr5:71184530-71184549 None:intergenic 65.0%
! AGTAGCGGTGGAGGTGGTGG+TGG + Chr5:71184599-71184618 MsG0580027925.01.T01:CDS 65.0%
! CTGTGGAAGGAGGAGCACGG+TGG - Chr5:71184457-71184476 None:intergenic 65.0%
! GCTCTCCCAGCTGCTGCTTC+CGG + Chr5:71184533-71184552 MsG0580027925.01.T01:CDS 65.0%
!! GGAGGTGGTGGTGGTGGTAG+CGG + Chr5:71184608-71184627 MsG0580027925.01.T01:CDS 65.0%
CCACCACCGGAAGCAGCAGC+TGG - Chr5:71184542-71184561 None:intergenic 70.0%
GTGGAGGCGGTGGCTGTGAC+CGG - Chr5:71184391-71184410 None:intergenic 70.0%
TATTGCGGCGGTGGAGGCGG+TGG - Chr5:71184401-71184420 None:intergenic 70.0%
! CCAGCTGCTGCTTCCGGTGG+TGG + Chr5:71184539-71184558 MsG0580027925.01.T01:CDS 70.0%
! CTCCCAGCTGCTGCTTCCGG+TGG + Chr5:71184536-71184555 MsG0580027925.01.T01:CDS 70.0%
!! AGCGGTGGAGGTGGTGGTGG+TGG + Chr5:71184602-71184621 MsG0580027925.01.T01:CDS 70.0%
!! GGTGGTGGTAGCGGTGGTGG+TGG + Chr5:71184617-71184636 MsG0580027925.01.T01:CDS 70.0%
!! GGTGGTGGTGGTAGCGGTGG+TGG + Chr5:71184614-71184633 MsG0580027925.01.T01:CDS 70.0%
!! GGTGGTGGTGGTGGTAGCGG+TGG + Chr5:71184611-71184630 MsG0580027925.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 71184035 71184838 71184035 ID=MsG0580027925.01;Name=MsG0580027925.01
Chr5 mRNA 71184035 71184838 71184035 ID=MsG0580027925.01.T01;Parent=MsG0580027925.01;Name=MsG0580027925.01.T01;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|267
Chr5 exon 71184035 71184838 71184035 ID=MsG0580027925.01.T01:exon:7113;Parent=MsG0580027925.01.T01
Chr5 CDS 71184035 71184838 71184035 ID=MsG0580027925.01.T01:cds;Parent=MsG0580027925.01.T01
Gene Sequence

>MsG0580027925.01.T01

ATGGAATTTGATGAACAAGAGGAACAAGAAGAGGAGATGGAGATTCCAGAAACACAAACACCAGTGCCAACGAGTTATGACTCACTTGGTAACTCAGCTTCACGTTCAAAACTCACCGTTGGAGTTGACGGAAGGAAAGGTAACGGCAACGGCGGTTTTGCTTCGACGGTGAGGTACCGAGAATGTCAGAAGAATCACGCCGTTAGCTTCGGTGGCCATGCTGTTGACGGTTGTTGCGAGTTTATCGCTGCCGGTGAAGAAGGAACACTTGAAGCTGTTATTTGCGCCGCTTGTAACTGTCACCGGAACTTCCACCGCAAAGAGATCGATGGTGAAACGGTTAGTTCATGTAACCGGTCACAGCCACCGCCTCCACCGCCGCAATATCATCACCACAGCAATCAATTCTCGCCTTACTACCACCGTGCTCCTCCTTCCACAGCCGGTTACCTTCACCACCATCATCTTGCAACTCCGGTGGCACATCACAGACCGTTGGCTCTCCCAGCTGCTGCTTCCGGTGGTGGAATGAGCAGAGAAGATGATGATATCTCAAACCCTAGCAGTAGCGGTGGAGGTGGTGGTGGTGGTAGCGGTGGTGGTGGATCAAGGAAGAGATTCAGAACAAAATTCACTCAGGAACAGAAAGAGAAGTTGCTGGCTTTTGCTGAAGAACATGGTTGGAGAATTCAGAAACAAGATGAAGCTGCTATAGAACAGTTTTGTGCTGAGAATTGTATCAAGAGAAATGTTCTTAAAGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA

Protein sequence

>MsG0580027925.01.T01

MEFDEQEEQEEEMEIPETQTPVPTSYDSLGNSASRSKLTVGVDGRKGNGNGGFASTVRYRECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEAVICAACNCHRNFHRKEIDGETVSSCNRSQPPPPPPQYHHHSNQFSPYYHRAPPSTAGYLHHHHLATPVAHHRPLALPAAASGGGMSREDDDISNPSSSGGGGGGGSGGGGSRKRFRTKFTQEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCIKRNVLKVWMHNNKNTLGKKP*