Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019540.01.T02 | XP_013455262.1 | 98.925 | 372 | 4 | 0 | 1 | 372 | 652 | 1023 | 0 | 782 |
| MsG0480019540.01.T01 | XP_013455262.1 | 98.715 | 467 | 6 | 0 | 1 | 467 | 557 | 1023 | 0 | 975 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019540.01.T01 | Q9M2R0 | 70.199 | 453 | 128 | 3 | 17 | 465 | 301 | 750 | 0 | 680 |
| MsG0480019540.01.T02 | Q9M2R0 | 72.727 | 374 | 98 | 2 | 1 | 370 | 377 | 750 | 0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019540.01.T01 | A0A072UJM2 | 98.715 | 467 | 6 | 0 | 1 | 467 | 557 | 1023 | 0.0 | 975 |
| MsG0480019540.01.T02 | A0A072UJM2 | 98.925 | 372 | 4 | 0 | 1 | 372 | 652 | 1023 | 0.0 | 782 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000719.01 | MsG0480019540.01 | 0.806147 | 9.473541e-50 | 5.103946e-47 |
| MsG0180005783.01 | MsG0480019540.01 | 0.826002 | 3.444320e-54 | 3.190396e-51 |
| MsG0180005784.01 | MsG0480019540.01 | 0.803330 | 3.670718e-49 | 1.839450e-46 |
| MsG0180006063.01 | MsG0480019540.01 | 0.865899 | 4.223564e-65 | 1.396796e-61 |
| MsG0280011066.01 | MsG0480019540.01 | 0.824019 | 1.012737e-53 | 8.863474e-51 |
| MsG0380014129.01 | MsG0480019540.01 | 0.813493 | 2.489298e-51 | 1.628135e-48 |
| MsG0380014735.01 | MsG0480019540.01 | 0.804258 | 2.355003e-49 | 1.208603e-46 |
| MsG0480019540.01 | MsG0480023152.01 | 0.803434 | 3.492582e-49 | 1.754901e-46 |
| MsG0480019540.01 | MsG0480023242.01 | 0.800372 | 1.486307e-48 | 6.909322e-46 |
| MsG0480019540.01 | MsG0580025153.01 | 0.828488 | 8.741627e-55 | 8.701940e-52 |
| MsG0480019540.01 | MsG0580028159.01 | 0.804996 | 1.652110e-49 | 8.641773e-47 |
| MsG0480019540.01 | MsG0580029792.01 | 0.841684 | 4.093408e-58 | 6.060354e-55 |
| MsG0480019540.01 | MsG0680031789.01 | 0.818885 | 1.551823e-52 | 1.176076e-49 |
| MsG0480019540.01 | MsG0780041121.01 | 0.801624 | 8.247964e-49 | 3.957257e-46 |
| MsG0480019540.01 | MsG0880046630.01 | 0.819817 | 9.515941e-53 | 7.400855e-50 |
| MsG0480019540.01 | MsG0880047251.01 | 0.816845 | 4.482981e-52 | 3.212148e-49 |
| MsG0380015802.01 | MsG0480019540.01 | 0.818248 | 2.164556e-52 | 1.611673e-49 |
| MsG0380016065.01 | MsG0480019540.01 | 0.814832 | 1.260190e-51 | 8.545949e-49 |
| MsG0280006787.01 | MsG0480019540.01 | 0.800148 | 1.650940e-48 | 7.630744e-46 |
| MsG0280009864.01 | MsG0480019540.01 | 0.800978 | 1.118235e-48 | 5.278990e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019540.01.T02 | MTR_4g033215 | 98.925 | 372 | 4 | 0 | 1 | 372 | 652 | 1023 | 0.0 | 782 |
| MsG0480019540.01.T02 | MTR_7g092770 | 70.933 | 375 | 104 | 2 | 1 | 370 | 378 | 752 | 0.0 | 575 |
| MsG0480019540.01.T02 | MTR_0305s0020 | 71.123 | 374 | 104 | 2 | 1 | 370 | 378 | 751 | 0.0 | 575 |
| MsG0480019540.01.T02 | MTR_5g010390 | 69.086 | 372 | 113 | 2 | 1 | 370 | 613 | 984 | 0.0 | 561 |
| MsG0480019540.01.T02 | MTR_0291s0010 | 66.842 | 380 | 119 | 2 | 1 | 373 | 398 | 777 | 0.0 | 553 |
| MsG0480019540.01.T02 | MTR_3g027150 | 66.492 | 382 | 118 | 2 | 1 | 372 | 420 | 801 | 0.0 | 551 |
| MsG0480019540.01.T02 | MTR_4g066150 | 69.542 | 371 | 112 | 1 | 1 | 370 | 377 | 747 | 0.0 | 546 |
| MsG0480019540.01.T02 | MTR_4g023460 | 67.733 | 375 | 116 | 2 | 1 | 370 | 745 | 1119 | 0.0 | 541 |
| MsG0480019540.01.T02 | MTR_8g031270 | 62.400 | 375 | 139 | 2 | 1 | 374 | 611 | 984 | 2.53e-174 | 513 |
| MsG0480019540.01.T02 | MTR_7g076900 | 59.140 | 372 | 151 | 1 | 2 | 372 | 621 | 992 | 1.98e-166 | 493 |
| MsG0480019540.01.T02 | MTR_4g107850 | 58.065 | 372 | 153 | 2 | 2 | 370 | 644 | 1015 | 1.34e-151 | 455 |
| MsG0480019540.01.T02 | MTR_6g027540 | 53.067 | 375 | 172 | 2 | 1 | 373 | 617 | 989 | 3.87e-142 | 429 |
| MsG0480019540.01.T02 | MTR_6g028050 | 51.175 | 383 | 174 | 4 | 1 | 370 | 621 | 1003 | 1.35e-133 | 407 |
| MsG0480019540.01.T02 | MTR_4g057675 | 54.301 | 372 | 160 | 1 | 9 | 370 | 389 | 760 | 3.68e-129 | 390 |
| MsG0480019540.01.T02 | MTR_1g015540 | 48.320 | 387 | 186 | 3 | 1 | 373 | 367 | 753 | 2.54e-117 | 359 |
| MsG0480019540.01.T02 | MTR_4g071870 | 49.731 | 372 | 143 | 2 | 9 | 370 | 389 | 726 | 1.40e-115 | 353 |
| MsG0480019540.01.T02 | MTR_5g096980 | 42.432 | 370 | 209 | 2 | 6 | 372 | 374 | 742 | 7.19e-100 | 313 |
| MsG0480019540.01.T02 | MTR_4g023250 | 56.000 | 125 | 52 | 1 | 263 | 387 | 1 | 122 | 3.52e-44 | 149 |
| MsG0480019540.01.T02 | MTR_4g023230 | 47.541 | 122 | 49 | 1 | 180 | 301 | 49 | 155 | 4.55e-31 | 116 |
| MsG0480019540.01.T02 | MTR_4g023390 | 47.115 | 104 | 33 | 2 | 266 | 369 | 16 | 97 | 4.67e-23 | 92.8 |
| MsG0480019540.01.T02 | MTR_4g023240 | 60.000 | 60 | 24 | 0 | 114 | 173 | 10 | 69 | 3.20e-16 | 73.2 |
| MsG0480019540.01.T01 | MTR_4g033215 | 98.715 | 467 | 6 | 0 | 1 | 467 | 557 | 1023 | 0.0 | 975 |
| MsG0480019540.01.T01 | MTR_0305s0020 | 69.163 | 454 | 132 | 4 | 17 | 465 | 301 | 751 | 0.0 | 672 |
| MsG0480019540.01.T01 | MTR_7g092770 | 67.841 | 454 | 140 | 3 | 17 | 465 | 300 | 752 | 0.0 | 668 |
| MsG0480019540.01.T01 | MTR_5g010390 | 65.875 | 463 | 154 | 3 | 5 | 465 | 524 | 984 | 0.0 | 657 |
| MsG0480019540.01.T01 | MTR_3g027150 | 64.642 | 461 | 151 | 4 | 18 | 467 | 342 | 801 | 0.0 | 638 |
| MsG0480019540.01.T01 | MTR_4g066150 | 66.449 | 459 | 150 | 2 | 8 | 465 | 292 | 747 | 0.0 | 636 |
| MsG0480019540.01.T01 | MTR_0291s0010 | 64.052 | 459 | 156 | 4 | 18 | 468 | 320 | 777 | 0.0 | 629 |
| MsG0480019540.01.T01 | MTR_4g023460 | 65.121 | 453 | 153 | 2 | 18 | 465 | 667 | 1119 | 0.0 | 627 |
| MsG0480019540.01.T01 | MTR_8g031270 | 60.352 | 454 | 177 | 3 | 18 | 469 | 532 | 984 | 0.0 | 593 |
| MsG0480019540.01.T01 | MTR_7g076900 | 56.987 | 458 | 188 | 3 | 18 | 467 | 536 | 992 | 0.0 | 568 |
| MsG0480019540.01.T01 | MTR_4g107850 | 55.150 | 466 | 190 | 5 | 5 | 465 | 564 | 1015 | 4.00e-178 | 527 |
| MsG0480019540.01.T01 | MTR_6g027540 | 51.068 | 468 | 216 | 4 | 3 | 468 | 533 | 989 | 1.73e-169 | 504 |
| MsG0480019540.01.T01 | MTR_4g057675 | 53.684 | 475 | 198 | 7 | 3 | 465 | 296 | 760 | 3.68e-161 | 476 |
| MsG0480019540.01.T01 | MTR_6g028050 | 48.590 | 461 | 217 | 5 | 18 | 465 | 550 | 1003 | 1.52e-159 | 479 |
| MsG0480019540.01.T01 | MTR_4g071870 | 51.204 | 457 | 170 | 6 | 20 | 465 | 312 | 726 | 2.07e-147 | 439 |
| MsG0480019540.01.T01 | MTR_1g015540 | 49.036 | 467 | 216 | 6 | 17 | 468 | 294 | 753 | 1.87e-143 | 430 |
| MsG0480019540.01.T01 | MTR_5g096980 | 40.625 | 448 | 261 | 3 | 23 | 467 | 297 | 742 | 1.67e-116 | 360 |
| MsG0480019540.01.T01 | MTR_4g023250 | 56.000 | 125 | 52 | 1 | 358 | 482 | 1 | 122 | 2.88e-43 | 149 |
| MsG0480019540.01.T01 | MTR_4g023230 | 47.541 | 122 | 49 | 1 | 275 | 396 | 49 | 155 | 1.18e-30 | 116 |
| MsG0480019540.01.T01 | MTR_4g023390 | 47.115 | 104 | 33 | 2 | 361 | 464 | 16 | 97 | 8.36e-23 | 93.2 |
| MsG0480019540.01.T01 | MTR_4g023240 | 60.000 | 60 | 24 | 0 | 209 | 268 | 10 | 69 | 4.55e-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019540.01.T02 | AT1G22610 | 84.946 | 372 | 56 | 0 | 1 | 372 | 637 | 1008 | 0.0 | 689 |
| MsG0480019540.01.T02 | AT3G57880 | 72.727 | 374 | 98 | 2 | 1 | 370 | 377 | 750 | 0.0 | 583 |
| MsG0480019540.01.T02 | AT3G57880 | 72.727 | 374 | 98 | 2 | 1 | 370 | 377 | 750 | 0.0 | 583 |
| MsG0480019540.01.T02 | AT3G57880 | 72.727 | 374 | 98 | 2 | 1 | 370 | 377 | 750 | 0.0 | 583 |
| MsG0480019540.01.T02 | AT3G57880 | 72.727 | 374 | 98 | 2 | 1 | 370 | 377 | 750 | 0.0 | 583 |
| MsG0480019540.01.T02 | AT5G12970 | 70.889 | 371 | 106 | 2 | 1 | 370 | 377 | 746 | 0.0 | 572 |
| MsG0480019540.01.T02 | AT1G51570 | 70.745 | 376 | 104 | 2 | 1 | 370 | 378 | 753 | 0.0 | 563 |
| MsG0480019540.01.T02 | AT5G06850 | 65.578 | 398 | 125 | 3 | 1 | 386 | 396 | 793 | 0.0 | 558 |
| MsG0480019540.01.T02 | AT4G11610 | 68.194 | 371 | 116 | 2 | 1 | 370 | 619 | 988 | 0.0 | 551 |
| MsG0480019540.01.T02 | AT4G11610 | 68.194 | 371 | 116 | 2 | 1 | 370 | 615 | 984 | 0.0 | 551 |
| MsG0480019540.01.T02 | AT4G11610 | 68.194 | 371 | 116 | 2 | 1 | 370 | 482 | 851 | 0.0 | 550 |
| MsG0480019540.01.T02 | AT5G48060 | 67.725 | 378 | 117 | 2 | 1 | 373 | 639 | 1016 | 0.0 | 549 |
| MsG0480019540.01.T02 | AT4G00700 | 60.322 | 373 | 145 | 2 | 1 | 370 | 611 | 983 | 1.39e-168 | 498 |
| MsG0480019540.01.T02 | AT4G00700 | 60.322 | 373 | 145 | 2 | 1 | 370 | 611 | 983 | 1.39e-168 | 498 |
| MsG0480019540.01.T02 | AT3G61300 | 56.836 | 373 | 158 | 3 | 2 | 372 | 580 | 951 | 1.88e-160 | 476 |
| MsG0480019540.01.T02 | AT1G04150 | 61.413 | 368 | 142 | 0 | 3 | 370 | 622 | 989 | 1.83e-158 | 472 |
| MsG0480019540.01.T02 | AT1G74720 | 57.067 | 375 | 156 | 3 | 1 | 370 | 684 | 1058 | 3.38e-151 | 455 |
| MsG0480019540.01.T02 | AT4G20080 | 52.139 | 374 | 174 | 2 | 1 | 369 | 376 | 749 | 2.38e-146 | 434 |
| MsG0480019540.01.T02 | AT3G03680 | 52.128 | 376 | 174 | 3 | 1 | 370 | 619 | 994 | 1.25e-137 | 418 |
| MsG0480019540.01.T02 | AT5G17980 | 51.852 | 378 | 174 | 5 | 1 | 370 | 649 | 1026 | 6.44e-134 | 409 |
| MsG0480019540.01.T02 | AT3G61720 | 38.021 | 384 | 197 | 12 | 1 | 350 | 370 | 746 | 5.72e-67 | 227 |
| MsG0480019540.01.T02 | AT5G03435 | 39.554 | 359 | 184 | 11 | 1 | 344 | 361 | 701 | 8.08e-66 | 223 |
| MsG0480019540.01.T02 | AT5G03435 | 46.970 | 198 | 98 | 3 | 1 | 193 | 361 | 556 | 4.85e-49 | 174 |
| MsG0480019540.01.T02 | AT5G44760 | 32.847 | 137 | 43 | 1 | 159 | 295 | 364 | 451 | 2.72e-17 | 84.0 |
| MsG0480019540.01.T01 | AT1G22610 | 82.869 | 467 | 80 | 0 | 1 | 467 | 542 | 1008 | 0.0 | 818 |
| MsG0480019540.01.T01 | AT3G57880 | 70.199 | 453 | 128 | 3 | 17 | 465 | 301 | 750 | 0.0 | 680 |
| MsG0480019540.01.T01 | AT3G57880 | 70.199 | 453 | 128 | 3 | 17 | 465 | 301 | 750 | 0.0 | 680 |
| MsG0480019540.01.T01 | AT3G57880 | 70.199 | 453 | 128 | 3 | 17 | 465 | 301 | 750 | 0.0 | 680 |
| MsG0480019540.01.T01 | AT3G57880 | 70.199 | 453 | 128 | 3 | 17 | 465 | 301 | 750 | 0.0 | 680 |
| MsG0480019540.01.T01 | AT5G12970 | 67.382 | 466 | 146 | 4 | 1 | 465 | 286 | 746 | 0.0 | 667 |
| MsG0480019540.01.T01 | AT1G51570 | 69.011 | 455 | 133 | 3 | 17 | 465 | 301 | 753 | 0.0 | 663 |
| MsG0480019540.01.T01 | AT4G11610 | 67.261 | 449 | 143 | 3 | 18 | 465 | 543 | 988 | 0.0 | 648 |
| MsG0480019540.01.T01 | AT4G11610 | 67.261 | 449 | 143 | 3 | 18 | 465 | 539 | 984 | 0.0 | 648 |
| MsG0480019540.01.T01 | AT4G11610 | 67.261 | 449 | 143 | 3 | 18 | 465 | 406 | 851 | 0.0 | 647 |
| MsG0480019540.01.T01 | AT5G06850 | 63.025 | 476 | 164 | 3 | 18 | 481 | 318 | 793 | 0.0 | 642 |
| MsG0480019540.01.T01 | AT5G48060 | 65.208 | 457 | 153 | 3 | 18 | 468 | 560 | 1016 | 0.0 | 637 |
| MsG0480019540.01.T01 | AT4G00700 | 55.579 | 466 | 203 | 3 | 3 | 465 | 519 | 983 | 0.0 | 558 |
| MsG0480019540.01.T01 | AT4G00700 | 55.579 | 466 | 203 | 3 | 3 | 465 | 519 | 983 | 0.0 | 558 |
| MsG0480019540.01.T01 | AT1G04150 | 57.050 | 461 | 186 | 2 | 8 | 465 | 538 | 989 | 0.0 | 544 |
| MsG0480019540.01.T01 | AT3G61300 | 52.643 | 473 | 210 | 6 | 1 | 467 | 487 | 951 | 0.0 | 539 |
| MsG0480019540.01.T01 | AT1G74720 | 56.977 | 430 | 180 | 3 | 41 | 465 | 629 | 1058 | 3.92e-176 | 523 |
| MsG0480019540.01.T01 | AT4G20080 | 49.680 | 469 | 224 | 4 | 1 | 464 | 288 | 749 | 1.13e-171 | 503 |
| MsG0480019540.01.T01 | AT3G03680 | 50.964 | 467 | 213 | 5 | 5 | 465 | 538 | 994 | 2.47e-168 | 501 |
| MsG0480019540.01.T01 | AT5G17980 | 49.130 | 460 | 218 | 6 | 14 | 465 | 575 | 1026 | 5.13e-158 | 476 |
| MsG0480019540.01.T01 | AT3G61720 | 36.797 | 462 | 245 | 14 | 18 | 445 | 298 | 746 | 9.38e-79 | 261 |
| MsG0480019540.01.T01 | AT5G03435 | 38.915 | 424 | 223 | 12 | 31 | 439 | 299 | 701 | 1.68e-78 | 260 |
| MsG0480019540.01.T01 | AT5G03435 | 44.106 | 263 | 137 | 4 | 31 | 288 | 299 | 556 | 2.91e-61 | 210 |
| MsG0480019540.01.T01 | AT5G44760 | 47.458 | 118 | 50 | 3 | 1 | 117 | 258 | 364 | 6.88e-24 | 104 |
| MsG0480019540.01.T01 | AT5G44760 | 32.847 | 137 | 43 | 1 | 254 | 390 | 364 | 451 | 4.37e-17 | 84.0 |
Find 124 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTGAACATAATGCATTT+TGG | 0.124007 | 4:+21864476 | None:intergenic |
| TGAACAAGGCAGGTTGTAAT+TGG | 0.220477 | 4:+21864219 | None:intergenic |
| CAACTATAATTGCTATAAAT+TGG | 0.221955 | 4:+21863809 | None:intergenic |
| TACTCATTATTATCCTCTTT+TGG | 0.232381 | 4:-21864607 | MsG0480019540.01.T01:CDS |
| TTTCTTTACTTGTTTGTGAT+TGG | 0.239952 | 4:-21864144 | MsG0480019540.01.T01:CDS |
| ACGAGCATCCGGAAGCTTTC+CGG | 0.246203 | 4:+21865118 | None:intergenic |
| CCTTCATAGGCAGCAAATTC+CGG | 0.256845 | 4:+21864883 | None:intergenic |
| ATGGTTGGCAATATCAATTC+AGG | 0.271540 | 4:+21864168 | None:intergenic |
| TTCTTTACTTGTTTGTGATT+GGG | 0.281409 | 4:-21864143 | MsG0480019540.01.T01:CDS |
| TGACATTATGCGATGAAAAT+TGG | 0.281887 | 4:+21864302 | None:intergenic |
| TCATCATCTTCTCACTGATC+TGG | 0.283757 | 4:-21863858 | MsG0480019540.01.T01:CDS |
| TCAGATCATTGTATCTGATT+TGG | 0.286145 | 4:+21863709 | None:intergenic |
| AACCCATTTGTTTCCATACT+TGG | 0.294660 | 4:+21864824 | None:intergenic |
| CATTGATTGGCTCCGCTATC+AGG | 0.304148 | 4:-21864439 | MsG0480019540.01.T01:CDS |
| TTGCACAGCTTGGGTTAATA+TGG | 0.320005 | 4:-21864526 | MsG0480019540.01.T01:CDS |
| GCATACTGTGTTGCCAAGTA+TGG | 0.338450 | 4:-21864837 | MsG0480019540.01.T01:CDS |
| TTCCAATTCTCTGATCTTTG+TGG | 0.338538 | 4:+21864673 | None:intergenic |
| GAATTGGAAAGGTGAGAATA+AGG | 0.347930 | 4:-21864659 | MsG0480019540.01.T01:CDS |
| ACTTGTTTGTGATTGGGATT+TGG | 0.356204 | 4:-21864137 | MsG0480019540.01.T01:CDS |
| TGATTGGGATTTGGAATTAC+CGG | 0.361185 | 4:-21864128 | MsG0480019540.01.T01:CDS |
| AGCTTGTCATCCAGATGAAT+TGG | 0.369444 | 4:-21864055 | MsG0480019540.01.T01:CDS |
| GGATTTGGAATTACCGGTTC+CGG | 0.369744 | 4:-21864122 | MsG0480019540.01.T01:CDS |
| GACCACAAAGATCAGAGAAT+TGG | 0.375978 | 4:-21864675 | MsG0480019540.01.T01:CDS |
| AATCTCTTGAAGAAATTAAC+TGG | 0.381502 | 4:+21863737 | None:intergenic |
| CTTCATAGGCAGCAAATTCC+GGG | 0.382713 | 4:+21864884 | None:intergenic |
| TTCATAGACCTAGCGCGGTC+GGG | 0.388551 | 4:-21865085 | MsG0480019540.01.T01:CDS |
| ATTGGAGACCGGAAAGCTTC+CGG | 0.401323 | 4:-21865126 | MsG0480019540.01.T01:CDS |
| TGAGGTTTACTTGCACAGCT+TGG | 0.403193 | 4:-21864536 | MsG0480019540.01.T01:CDS |
| CTAAATCTCCAACCACAGTT+TGG | 0.407369 | 4:+21863944 | None:intergenic |
| AGCCAATCAATGTGTCTAAC+AGG | 0.409018 | 4:+21864450 | None:intergenic |
| GAGGTTTACTTGCACAGCTT+GGG | 0.411394 | 4:-21864535 | MsG0480019540.01.T01:CDS |
| TACCTGTTAGACACATTGAT+TGG | 0.416771 | 4:-21864452 | MsG0480019540.01.T01:CDS |
| GTATACTGCTCATTCCATCT+AGG | 0.418342 | 4:+21864771 | None:intergenic |
| CCGGAATTTGCTGCCTATGA+AGG | 0.426300 | 4:-21864883 | MsG0480019540.01.T01:CDS |
| TCTTCCTCCCCGACCGCGCT+AGG | 0.430116 | 4:+21865077 | None:intergenic |
| AATTCCTCATCCAATTCATC+TGG | 0.433329 | 4:+21864045 | None:intergenic |
| GTGGATTCCTTGGCCGGAAC+CGG | 0.433338 | 4:+21864109 | None:intergenic |
| GAGCTCAAGCTTTACTGAGT+TGG | 0.439961 | 4:-21863906 | MsG0480019540.01.T01:CDS |
| GAGAAATGTTCCGCAAAGAT+TGG | 0.442111 | 4:-21865144 | MsG0480019540.01.T01:CDS |
| CATCATCTTCTCACTGATCT+GGG | 0.444824 | 4:-21863857 | MsG0480019540.01.T01:CDS |
| CTCCGAATTTGTCTTGAGGC+GGG | 0.445589 | 4:-21865014 | MsG0480019540.01.T01:CDS |
| TTCTCCTTAGACTCCACATA+TGG | 0.451473 | 4:+21864331 | None:intergenic |
| ATTACCATATGTGGAGTCTA+AGG | 0.455668 | 4:-21864335 | MsG0480019540.01.T01:CDS |
| CTCCTCAAGTGTTTCGAAGA+CGG | 0.456677 | 4:+21864945 | None:intergenic |
| TTTCCGGTCTCCAATCTTTG+CGG | 0.458718 | 4:+21865134 | None:intergenic |
| CAATTTATAGCAATTATAGT+TGG | 0.463673 | 4:-21863808 | MsG0480019540.01.T01:CDS |
| GAACAAGGCAGGTTGTAATT+GGG | 0.464236 | 4:+21864220 | None:intergenic |
| CGCGGTCGGGGAGGAAGAAA+CGG | 0.464656 | 4:-21865072 | MsG0480019540.01.T01:CDS |
| ATATCAGCAGGTCTTGTAGT+TGG | 0.468121 | 4:+21864012 | None:intergenic |
| TTGACACACTGTCCCCTAGA+TGG | 0.468348 | 4:-21864785 | MsG0480019540.01.T01:CDS |
| TCTTCATGCTGCGTCATCCT+CGG | 0.474472 | 4:-21863783 | MsG0480019540.01.T01:CDS |
| ACATTGGATATCTCGAACTC+GGG | 0.475864 | 4:-21864917 | MsG0480019540.01.T01:CDS |
| ACCCCGCCTCAAGACAAATT+CGG | 0.477483 | 4:+21865012 | None:intergenic |
| GGAAGAAACGGAGAGAAAGA+AGG | 0.480058 | 4:-21865060 | MsG0480019540.01.T01:CDS |
| TCCATGTGAGGTGGATTCCT+TGG | 0.486265 | 4:+21864099 | None:intergenic |
| TATACTGCTCATTCCATCTA+GGG | 0.496045 | 4:+21864772 | None:intergenic |
| TTGCCAAGTATGGAAACAAA+TGG | 0.503643 | 4:-21864827 | MsG0480019540.01.T01:CDS |
| TCGCATAATGTCACTACTCT+CGG | 0.504638 | 4:-21864292 | MsG0480019540.01.T01:CDS |
| AGATTGAACCAACGAGCATC+CGG | 0.511725 | 4:+21865107 | None:intergenic |
| TGTGGTCACTGCTACCATTG+AGG | 0.518823 | 4:+21864691 | None:intergenic |
| CGCATAATGTCACTACTCTC+GGG | 0.522301 | 4:-21864291 | MsG0480019540.01.T01:CDS |
| CTTCATAGACCTAGCGCGGT+CGG | 0.522645 | 4:-21865086 | MsG0480019540.01.T01:CDS |
| CTCATTCGAACAATATCAGC+AGG | 0.525290 | 4:+21864000 | None:intergenic |
| AACTCGGGATACTTAGTGCC+CGG | 0.528434 | 4:-21864902 | MsG0480019540.01.T01:CDS |
| TGTGAGGTGGATTCCTTGGC+CGG | 0.528935 | 4:+21864103 | None:intergenic |
| GGAATTACCGGTTCCGGCCA+AGG | 0.528999 | 4:-21864116 | MsG0480019540.01.T01:CDS |
| TTTGACAATCACCACCTCAA+TGG | 0.529571 | 4:-21864705 | MsG0480019540.01.T01:CDS |
| ATAATTGCTATAAATTGGAA+TGG | 0.531398 | 4:+21863814 | None:intergenic |
| TCATAGACCTAGCGCGGTCG+GGG | 0.532325 | 4:-21865084 | MsG0480019540.01.T01:CDS |
| TGCCAAGTATGGAAACAAAT+GGG | 0.532532 | 4:-21864826 | MsG0480019540.01.T01:CDS |
| TTGAGCTCTTTCGCCTTGAG+TGG | 0.534744 | 4:+21863921 | None:intergenic |
| AACATTGGATATCTCGAACT+CGG | 0.535580 | 4:-21864918 | MsG0480019540.01.T01:CDS |
| AACCGTCTTCGAAACACTTG+AGG | 0.536418 | 4:-21864947 | MsG0480019540.01.T01:CDS |
| TCCGAATTTGTCTTGAGGCG+GGG | 0.536647 | 4:-21865013 | MsG0480019540.01.T01:CDS |
| CGGAATTTGCTGCCTATGAA+GGG | 0.542458 | 4:-21864882 | MsG0480019540.01.T01:CDS |
| CTGCCTATGAAGGGAAAAGA+TGG | 0.545658 | 4:-21864873 | MsG0480019540.01.T01:CDS |
| TTAGGTTGAAGAACCAAAAG+AGG | 0.547365 | 4:+21864594 | None:intergenic |
| CATGGATGCTAGGCTTTCAC+AGG | 0.547979 | 4:-21864082 | MsG0480019540.01.T01:CDS |
| GCCAAGGAATCCACCTCACA+TGG | 0.549034 | 4:-21864100 | MsG0480019540.01.T01:CDS |
| AAGAAATTAACTGGTACTGA+TGG | 0.550550 | 4:+21863746 | None:intergenic |
| TACTGAGTTGGAGAGACTCA+AGG | 0.551057 | 4:-21863894 | MsG0480019540.01.T01:CDS |
| ATCCACCTCACATGGATGCT+AGG | 0.551946 | 4:-21864092 | MsG0480019540.01.T01:CDS |
| GGTAGAGTCCAAACTGTGGT+TGG | 0.554358 | 4:-21863952 | MsG0480019540.01.T01:CDS |
| GGCTTAACGACATTTGCACT+TGG | 0.556646 | 4:-21864248 | MsG0480019540.01.T01:CDS |
| TCAATGTGTCTAACAGGTAT+CGG | 0.558957 | 4:+21864456 | None:intergenic |
| CCTTGCTGCCACAATCTGCA+TGG | 0.563384 | 4:+21864416 | None:intergenic |
| AAAGAATGGAGAGCTGCACT+TGG | 0.565426 | 4:-21864562 | MsG0480019540.01.T01:CDS |
| GAAAGCTTCCGGATGCTCGT+TGG | 0.567546 | 4:-21865115 | MsG0480019540.01.T01:CDS |
| CTATCAGGCCATGCAGATTG+TGG | 0.567929 | 4:-21864424 | MsG0480019540.01.T01:CDS |
| ATCATTGTATCTGATTTGGA+AGG | 0.569129 | 4:+21863713 | None:intergenic |
| TACGACAGATTGAGAAGTGT+GGG | 0.570803 | 4:-21863976 | MsG0480019540.01.T01:CDS |
| GTTGGAGATTTAGCCACTCA+AGG | 0.572360 | 4:-21863934 | MsG0480019540.01.T01:CDS |
| TCTCCGAATTTGTCTTGAGG+CGG | 0.574374 | 4:-21865015 | MsG0480019540.01.T01:CDS |
| TGGTTGGCAATATCAATTCA+GGG | 0.575560 | 4:+21864169 | None:intergenic |
| TCATCCAGATGAATTGGATG+AGG | 0.584013 | 4:-21864049 | MsG0480019540.01.T01:CDS |
| GATGGAATGAGCAGTATACA+TGG | 0.585191 | 4:-21864767 | MsG0480019540.01.T01:CDS |
| CTGCTGATATTGTTCGAATG+AGG | 0.587966 | 4:-21863999 | MsG0480019540.01.T01:CDS |
| CCATGCAGATTGTGGCAGCA+AGG | 0.592875 | 4:-21864416 | MsG0480019540.01.T01:CDS |
| ACTGAGTTGGAGAGACTCAA+GGG | 0.596495 | 4:-21863893 | MsG0480019540.01.T01:CDS |
| GAACAAGACATGAACAAGGC+AGG | 0.599403 | 4:+21864209 | None:intergenic |
| CTAACTGTGATCACAGTGCA+TGG | 0.599529 | 4:+21864732 | None:intergenic |
| CAAAGATCAGAGAATTGGAA+AGG | 0.600718 | 4:-21864670 | MsG0480019540.01.T01:CDS |
| TCAACTGATTCACGTCGAAG+TGG | 0.602308 | 4:+21864375 | None:intergenic |
| AGCCTAGCATCCATGTGAGG+TGG | 0.607689 | 4:+21864090 | None:intergenic |
| TGGCAATTTGCTTCGAACCG+AGG | 0.610719 | 4:+21863766 | None:intergenic |
| TCATCTCCGAATTTGTCTTG+AGG | 0.614427 | 4:-21865018 | MsG0480019540.01.T01:CDS |
| GTTCCGCAAAGATTGGAGAC+CGG | 0.616738 | 4:-21865137 | MsG0480019540.01.T01:CDS |
| CAATCTGCATGGCCTGATAG+CGG | 0.622267 | 4:+21864427 | None:intergenic |
| CGTCTTCGAAACACTTGAGG+AGG | 0.625391 | 4:-21864944 | MsG0480019540.01.T01:CDS |
| GAGAGCTGCACTTGGCTGTG+AGG | 0.625943 | 4:-21864554 | MsG0480019540.01.T01:CDS |
| TAGACCTAGCGCGGTCGGGG+AGG | 0.629162 | 4:-21865081 | MsG0480019540.01.T01:CDS |
| AGTTGAGTATATGCTTGATG+TGG | 0.638952 | 4:-21864358 | MsG0480019540.01.T01:CDS |
| GTACGACAGATTGAGAAGTG+TGG | 0.649017 | 4:-21863977 | MsG0480019540.01.T01:CDS |
| TTGATGTGGATTACCATATG+TGG | 0.664898 | 4:-21864344 | MsG0480019540.01.T01:CDS |
| ACTGATTCACGTCGAAGTGG+CGG | 0.671903 | 4:+21864378 | None:intergenic |
| ATGGAATGAGCAGTATACAT+GGG | 0.673909 | 4:-21864766 | MsG0480019540.01.T01:CDS |
| CAATCTTCATAGACCTAGCG+CGG | 0.678986 | 4:-21865090 | MsG0480019540.01.T01:CDS |
| GAATGAGCAGTATACATGGG+AGG | 0.691843 | 4:-21864763 | MsG0480019540.01.T01:CDS |
| GGTCACTGCTACCATTGAGG+TGG | 0.693069 | 4:+21864694 | None:intergenic |
| ATACTGCTCATTCCATCTAG+GGG | 0.694930 | 4:+21864773 | None:intergenic |
| TCAAGAACAAGACATGAACA+AGG | 0.696192 | 4:+21864205 | None:intergenic |
| GACAGATTGAGAAGTGTGGG+AGG | 0.712782 | 4:-21863973 | MsG0480019540.01.T01:CDS |
| GAAAGCCTAGCATCCATGTG+AGG | 0.756739 | 4:+21864087 | None:intergenic |
| GGGAGGTAGAGTCCAAACTG+TGG | 0.795354 | 4:-21863956 | MsG0480019540.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTGCTATAAATTGGAA+TGG | + | Chr4:21865055-21865074 | None:intergenic | 20.0% |
| !! | CAACTATAATTGCTATAAAT+TGG | + | Chr4:21865060-21865079 | None:intergenic | 20.0% |
| !! | CAATTTATAGCAATTATAGT+TGG | - | Chr4:21865058-21865077 | MsG0480019540.01.T01:CDS | 20.0% |
| ! | AACAAGTAAAGAAAAATGGT+TGG | + | Chr4:21864716-21864735 | None:intergenic | 25.0% |
| ! | AATCTCTTGAAGAAATTAAC+TGG | + | Chr4:21865132-21865151 | None:intergenic | 25.0% |
| ! | CACAAACAAGTAAAGAAAAA+TGG | + | Chr4:21864720-21864739 | None:intergenic | 25.0% |
| ! | TTCTTTACTTGTTTGTGATT+GGG | - | Chr4:21864723-21864742 | MsG0480019540.01.T01:CDS | 25.0% |
| ! | TTTCTTTACTTGTTTGTGAT+TGG | - | Chr4:21864722-21864741 | MsG0480019540.01.T01:CDS | 25.0% |
| !! | TACTCATTATTATCCTCTTT+TGG | - | Chr4:21864259-21864278 | MsG0480019540.01.T01:CDS | 25.0% |
| TGACATTATGCGATGAAAAT+TGG | + | Chr4:21864567-21864586 | None:intergenic | 30.0% | |
| ! | AAGAAATTAACTGGTACTGA+TGG | + | Chr4:21865123-21865142 | None:intergenic | 30.0% |
| ! | GGTTGAACATAATGCATTTT+GGG | + | Chr4:21864392-21864411 | None:intergenic | 30.0% |
| !! | CCTAATGGGTTAAAAAAGAA+TGG | - | Chr4:21864290-21864309 | MsG0480019540.01.T01:CDS | 30.0% |
| !!! | CCATTCTTTTTTAACCCATT+AGG | + | Chr4:21864293-21864312 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTTCAACCTAAT+GGG | - | Chr4:21864276-21864295 | MsG0480019540.01.T01:CDS | 30.0% |
| AACATTGGATATCTCGAACT+CGG | - | Chr4:21863948-21863967 | MsG0480019540.01.T01:CDS | 35.0% | |
| AACCCATTTGTTTCCATACT+TGG | + | Chr4:21864045-21864064 | None:intergenic | 35.0% | |
| AATTCCTCATCCAATTCATC+TGG | + | Chr4:21864824-21864843 | None:intergenic | 35.0% | |
| ACTTGTTTGTGATTGGGATT+TGG | - | Chr4:21864729-21864748 | MsG0480019540.01.T01:CDS | 35.0% | |
| AGTTGAGTATATGCTTGATG+TGG | - | Chr4:21864508-21864527 | MsG0480019540.01.T01:CDS | 35.0% | |
| ATGGAATGAGCAGTATACAT+GGG | - | Chr4:21864100-21864119 | MsG0480019540.01.T01:CDS | 35.0% | |
| ATGGTTGGCAATATCAATTC+AGG | + | Chr4:21864701-21864720 | None:intergenic | 35.0% | |
| ATTACCATATGTGGAGTCTA+AGG | - | Chr4:21864531-21864550 | MsG0480019540.01.T01:CDS | 35.0% | |
| CAAAGATCAGAGAATTGGAA+AGG | - | Chr4:21864196-21864215 | MsG0480019540.01.T01:CDS | 35.0% | |
| GAATTGGAAAGGTGAGAATA+AGG | - | Chr4:21864207-21864226 | MsG0480019540.01.T01:CDS | 35.0% | |
| TACCTGTTAGACACATTGAT+TGG | - | Chr4:21864414-21864433 | MsG0480019540.01.T01:CDS | 35.0% | |
| TATACTGCTCATTCCATCTA+GGG | + | Chr4:21864097-21864116 | None:intergenic | 35.0% | |
| TCAAGAACAAGACATGAACA+AGG | + | Chr4:21864664-21864683 | None:intergenic | 35.0% | |
| TCAATGTGTCTAACAGGTAT+CGG | + | Chr4:21864413-21864432 | None:intergenic | 35.0% | |
| TGCCAAGTATGGAAACAAAT+GGG | - | Chr4:21864040-21864059 | MsG0480019540.01.T01:CDS | 35.0% | |
| TGGTTGGCAATATCAATTCA+GGG | + | Chr4:21864700-21864719 | None:intergenic | 35.0% | |
| TTCCAATTCTCTGATCTTTG+TGG | + | Chr4:21864196-21864215 | None:intergenic | 35.0% | |
| TTGCCAAGTATGGAAACAAA+TGG | - | Chr4:21864039-21864058 | MsG0480019540.01.T01:CDS | 35.0% | |
| ! | CGGTTGAACATAATGCATTT+TGG | + | Chr4:21864393-21864412 | None:intergenic | 35.0% |
| ! | GTTTTACTGCTGTGTGTAAA+TGG | - | Chr4:21864597-21864616 | MsG0480019540.01.T01:CDS | 35.0% |
| ! | TGATTGGGATTTGGAATTAC+CGG | - | Chr4:21864738-21864757 | MsG0480019540.01.T01:CDS | 35.0% |
| ! | TTGATGTGGATTACCATATG+TGG | - | Chr4:21864522-21864541 | MsG0480019540.01.T01:CDS | 35.0% |
| !! | TAATGCATTTTGGGAAGCAA+TGG | + | Chr4:21864383-21864402 | None:intergenic | 35.0% |
| !! | TTAGGTTGAAGAACCAAAAG+AGG | + | Chr4:21864275-21864294 | None:intergenic | 35.0% |
| !!! | CTTTTGGTTCTTCAACCTAA+TGG | - | Chr4:21864275-21864294 | MsG0480019540.01.T01:CDS | 35.0% |
| ACATTGGATATCTCGAACTC+GGG | - | Chr4:21863949-21863968 | MsG0480019540.01.T01:CDS | 40.0% | |
| AGCCAATCAATGTGTCTAAC+AGG | + | Chr4:21864419-21864438 | None:intergenic | 40.0% | |
| AGCTTGTCATCCAGATGAAT+TGG | - | Chr4:21864811-21864830 | MsG0480019540.01.T01:CDS | 40.0% | |
| ATACTGCTCATTCCATCTAG+GGG | + | Chr4:21864096-21864115 | None:intergenic | 40.0% | |
| CACTTGAGGAGGAAAAACAT+TGG | - | Chr4:21863933-21863952 | MsG0480019540.01.T01:CDS | 40.0% | |
| CATCATCTTCTCACTGATCT+GGG | - | Chr4:21865009-21865028 | MsG0480019540.01.T01:CDS | 40.0% | |
| CTAAATCTCCAACCACAGTT+TGG | + | Chr4:21864925-21864944 | None:intergenic | 40.0% | |
| CTCATTCGAACAATATCAGC+AGG | + | Chr4:21864869-21864888 | None:intergenic | 40.0% | |
| CTGCTGATATTGTTCGAATG+AGG | - | Chr4:21864867-21864886 | MsG0480019540.01.T01:CDS | 40.0% | |
| GAACAAGGCAGGTTGTAATT+GGG | + | Chr4:21864649-21864668 | None:intergenic | 40.0% | |
| GACCACAAAGATCAGAGAAT+TGG | - | Chr4:21864191-21864210 | MsG0480019540.01.T01:CDS | 40.0% | |
| GAGAAATGTTCCGCAAAGAT+TGG | - | Chr4:21863722-21863741 | MsG0480019540.01.T01:CDS | 40.0% | |
| GATGGAATGAGCAGTATACA+TGG | - | Chr4:21864099-21864118 | MsG0480019540.01.T01:CDS | 40.0% | |
| GTATACTGCTCATTCCATCT+AGG | + | Chr4:21864098-21864117 | None:intergenic | 40.0% | |
| TCATCATCTTCTCACTGATC+TGG | - | Chr4:21865008-21865027 | MsG0480019540.01.T01:CDS | 40.0% | |
| TCATCCAGATGAATTGGATG+AGG | - | Chr4:21864817-21864836 | MsG0480019540.01.T01:CDS | 40.0% | |
| TCATCTCCGAATTTGTCTTG+AGG | - | Chr4:21863848-21863867 | MsG0480019540.01.T01:CDS | 40.0% | |
| TCGCATAATGTCACTACTCT+CGG | - | Chr4:21864574-21864593 | MsG0480019540.01.T01:CDS | 40.0% | |
| TGAACAAGGCAGGTTGTAAT+TGG | + | Chr4:21864650-21864669 | None:intergenic | 40.0% | |
| TTCTCCTTAGACTCCACATA+TGG | + | Chr4:21864538-21864557 | None:intergenic | 40.0% | |
| TTGCACAGCTTGGGTTAATA+TGG | - | Chr4:21864340-21864359 | MsG0480019540.01.T01:CDS | 40.0% | |
| TTTGACAATCACCACCTCAA+TGG | - | Chr4:21864161-21864180 | MsG0480019540.01.T01:CDS | 40.0% | |
| ! | ATATCAGCAGGTCTTGTAGT+TGG | + | Chr4:21864857-21864876 | None:intergenic | 40.0% |
| ! | CTACCATCTTTTCCCTTCAT+AGG | + | Chr4:21863999-21864018 | None:intergenic | 40.0% |
| ! | TACGACAGATTGAGAAGTGT+GGG | - | Chr4:21864890-21864909 | MsG0480019540.01.T01:CDS | 40.0% |
| AAAGAATGGAGAGCTGCACT+TGG | - | Chr4:21864304-21864323 | MsG0480019540.01.T01:CDS | 45.0% | |
| AACCGTCTTCGAAACACTTG+AGG | - | Chr4:21863919-21863938 | MsG0480019540.01.T01:CDS | 45.0% | |
| AGATTGAACCAACGAGCATC+CGG | + | Chr4:21863762-21863781 | None:intergenic | 45.0% | |
| CAATCTTCATAGACCTAGCG+CGG | - | Chr4:21863776-21863795 | MsG0480019540.01.T01:CDS | 45.0% | |
| CCTTCATAGGCAGCAAATTC+CGG | + | Chr4:21863986-21864005 | None:intergenic | 45.0% | |
| CGCATAATGTCACTACTCTC+GGG | - | Chr4:21864575-21864594 | MsG0480019540.01.T01:CDS | 45.0% | |
| CTAACTGTGATCACAGTGCA+TGG | + | Chr4:21864137-21864156 | None:intergenic | 45.0% | |
| CTCCTCAAGTGTTTCGAAGA+CGG | + | Chr4:21863924-21863943 | None:intergenic | 45.0% | |
| CTGCCTATGAAGGGAAAAGA+TGG | - | Chr4:21863993-21864012 | MsG0480019540.01.T01:CDS | 45.0% | |
| CTTCATAGGCAGCAAATTCC+GGG | + | Chr4:21863985-21864004 | None:intergenic | 45.0% | |
| GAACAAGACATGAACAAGGC+AGG | + | Chr4:21864660-21864679 | None:intergenic | 45.0% | |
| GAATGAGCAGTATACATGGG+AGG | - | Chr4:21864103-21864122 | MsG0480019540.01.T01:CDS | 45.0% | |
| GAGCTCAAGCTTTACTGAGT+TGG | - | Chr4:21864960-21864979 | MsG0480019540.01.T01:CDS | 45.0% | |
| GAGGTTTACTTGCACAGCTT+GGG | - | Chr4:21864331-21864350 | MsG0480019540.01.T01:CDS | 45.0% | |
| GCATACTGTGTTGCCAAGTA+TGG | - | Chr4:21864029-21864048 | MsG0480019540.01.T01:CDS | 45.0% | |
| GGAAGAAACGGAGAGAAAGA+AGG | - | Chr4:21863806-21863825 | MsG0480019540.01.T01:CDS | 45.0% | |
| GGCTTAACGACATTTGCACT+TGG | - | Chr4:21864618-21864637 | MsG0480019540.01.T01:CDS | 45.0% | |
| GTACGACAGATTGAGAAGTG+TGG | - | Chr4:21864889-21864908 | MsG0480019540.01.T01:CDS | 45.0% | |
| GTTGGAGATTTAGCCACTCA+AGG | - | Chr4:21864932-21864951 | MsG0480019540.01.T01:CDS | 45.0% | |
| TCTCCGAATTTGTCTTGAGG+CGG | - | Chr4:21863851-21863870 | MsG0480019540.01.T01:CDS | 45.0% | |
| TGAGGTTTACTTGCACAGCT+TGG | - | Chr4:21864330-21864349 | MsG0480019540.01.T01:CDS | 45.0% | |
| TTTCCGGTCTCCAATCTTTG+CGG | + | Chr4:21863735-21863754 | None:intergenic | 45.0% | |
| ! | ACTGAGTTGGAGAGACTCAA+GGG | - | Chr4:21864973-21864992 | MsG0480019540.01.T01:CDS | 45.0% |
| ! | TACTGAGTTGGAGAGACTCA+AGG | - | Chr4:21864972-21864991 | MsG0480019540.01.T01:CDS | 45.0% |
| ! | TCAACTGATTCACGTCGAAG+TGG | + | Chr4:21864494-21864513 | None:intergenic | 45.0% |
| !! | CGGAATTTGCTGCCTATGAA+GGG | - | Chr4:21863984-21864003 | MsG0480019540.01.T01:CDS | 45.0% |
| !! | GGATTTGGAATTACCGGTTC+CGG | - | Chr4:21864744-21864763 | MsG0480019540.01.T01:CDS | 45.0% |
| AACTCGGGATACTTAGTGCC+CGG | - | Chr4:21863964-21863983 | MsG0480019540.01.T01:CDS | 50.0% | |
| ACCCCGCCTCAAGACAAATT+CGG | + | Chr4:21863857-21863876 | None:intergenic | 50.0% | |
| ATCCACCTCACATGGATGCT+AGG | - | Chr4:21864774-21864793 | MsG0480019540.01.T01:CDS | 50.0% | |
| ATTGGAGACCGGAAAGCTTC+CGG | - | Chr4:21863740-21863759 | MsG0480019540.01.T01:CDS | 50.0% | |
| CAATCTGCATGGCCTGATAG+CGG | + | Chr4:21864442-21864461 | None:intergenic | 50.0% | |
| CATGGATGCTAGGCTTTCAC+AGG | - | Chr4:21864784-21864803 | MsG0480019540.01.T01:CDS | 50.0% | |
| CGTCTTCGAAACACTTGAGG+AGG | - | Chr4:21863922-21863941 | MsG0480019540.01.T01:CDS | 50.0% | |
| CTATCAGGCCATGCAGATTG+TGG | - | Chr4:21864442-21864461 | MsG0480019540.01.T01:CDS | 50.0% | |
| CTCCGAATTTGTCTTGAGGC+GGG | - | Chr4:21863852-21863871 | MsG0480019540.01.T01:CDS | 50.0% | |
| GAAAGCCTAGCATCCATGTG+AGG | + | Chr4:21864782-21864801 | None:intergenic | 50.0% | |
| GGTAGAGTCCAAACTGTGGT+TGG | - | Chr4:21864914-21864933 | MsG0480019540.01.T01:CDS | 50.0% | |
| GTTCCGCAAAGATTGGAGAC+CGG | - | Chr4:21863729-21863748 | MsG0480019540.01.T01:CDS | 50.0% | |
| TCCGAATTTGTCTTGAGGCG+GGG | - | Chr4:21863853-21863872 | MsG0480019540.01.T01:CDS | 50.0% | |
| TCTTCATGCTGCGTCATCCT+CGG | - | Chr4:21865083-21865102 | MsG0480019540.01.T01:CDS | 50.0% | |
| TGTGGTCACTGCTACCATTG+AGG | + | Chr4:21864178-21864197 | None:intergenic | 50.0% | |
| TTGACACACTGTCCCCTAGA+TGG | - | Chr4:21864081-21864100 | MsG0480019540.01.T01:CDS | 50.0% | |
| TTGAGCTCTTTCGCCTTGAG+TGG | + | Chr4:21864948-21864967 | None:intergenic | 50.0% | |
| ! | ACTGATTCACGTCGAAGTGG+CGG | + | Chr4:21864491-21864510 | None:intergenic | 50.0% |
| ! | CATTGATTGGCTCCGCTATC+AGG | - | Chr4:21864427-21864446 | MsG0480019540.01.T01:CDS | 50.0% |
| ! | GACAGATTGAGAAGTGTGGG+AGG | - | Chr4:21864893-21864912 | MsG0480019540.01.T01:CDS | 50.0% |
| ! | TCCATGTGAGGTGGATTCCT+TGG | + | Chr4:21864770-21864789 | None:intergenic | 50.0% |
| ! | TGGCAATTTGCTTCGAACCG+AGG | + | Chr4:21865103-21865122 | None:intergenic | 50.0% |
| !! | CCGGAATTTGCTGCCTATGA+AGG | - | Chr4:21863983-21864002 | MsG0480019540.01.T01:CDS | 50.0% |
| ACGAGCATCCGGAAGCTTTC+CGG | + | Chr4:21863751-21863770 | None:intergenic | 55.0% | |
| AGCCTAGCATCCATGTGAGG+TGG | + | Chr4:21864779-21864798 | None:intergenic | 55.0% | |
| CCATGCAGATTGTGGCAGCA+AGG | - | Chr4:21864450-21864469 | MsG0480019540.01.T01:CDS | 55.0% | |
| CCTTGCTGCCACAATCTGCA+TGG | + | Chr4:21864453-21864472 | None:intergenic | 55.0% | |
| CTTCATAGACCTAGCGCGGT+CGG | - | Chr4:21863780-21863799 | MsG0480019540.01.T01:CDS | 55.0% | |
| GAAAGCTTCCGGATGCTCGT+TGG | - | Chr4:21863751-21863770 | MsG0480019540.01.T01:CDS | 55.0% | |
| GCCAAGGAATCCACCTCACA+TGG | - | Chr4:21864766-21864785 | MsG0480019540.01.T01:CDS | 55.0% | |
| GGGAGGTAGAGTCCAAACTG+TGG | - | Chr4:21864910-21864929 | MsG0480019540.01.T01:CDS | 55.0% | |
| GGTCACTGCTACCATTGAGG+TGG | + | Chr4:21864175-21864194 | None:intergenic | 55.0% | |
| TTCATAGACCTAGCGCGGTC+GGG | - | Chr4:21863781-21863800 | MsG0480019540.01.T01:CDS | 55.0% | |
| ! | TGTGAGGTGGATTCCTTGGC+CGG | + | Chr4:21864766-21864785 | None:intergenic | 55.0% |
| GAGAGCTGCACTTGGCTGTG+AGG | - | Chr4:21864312-21864331 | MsG0480019540.01.T01:CDS | 60.0% | |
| GTGGATTCCTTGGCCGGAAC+CGG | + | Chr4:21864760-21864779 | None:intergenic | 60.0% | |
| TCATAGACCTAGCGCGGTCG+GGG | - | Chr4:21863782-21863801 | MsG0480019540.01.T01:CDS | 60.0% | |
| !! | GGAATTACCGGTTCCGGCCA+AGG | - | Chr4:21864750-21864769 | MsG0480019540.01.T01:CDS | 60.0% |
| CGCGGTCGGGGAGGAAGAAA+CGG | - | Chr4:21863794-21863813 | MsG0480019540.01.T01:CDS | 65.0% | |
| TAGACCTAGCGCGGTCGGGG+AGG | - | Chr4:21863785-21863804 | MsG0480019540.01.T01:CDS | 70.0% | |
| TCTTCCTCCCCGACCGCGCT+AGG | + | Chr4:21863792-21863811 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 21863714 | 21865174 | 21863714 | ID=MsG0480019540.01;Name=MsG0480019540.01 |
| Chr4 | mRNA | 21863714 | 21865174 | 21863714 | ID=MsG0480019540.01.T01;Parent=MsG0480019540.01;Name=MsG0480019540.01.T01;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|486 |
| Chr4 | exon | 21863714 | 21865174 | 21863714 | ID=MsG0480019540.01.T01:exon:10482;Parent=MsG0480019540.01.T01 |
| Chr4 | CDS | 21863714 | 21865174 | 21863714 | ID=MsG0480019540.01.T01:cds;Parent=MsG0480019540.01.T01 |
| Chr4 | mRNA | 21863714 | 21864889 | 21863714 | ID=MsG0480019540.01.T02;Parent=MsG0480019540.01;Name=MsG0480019540.01.T02;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|0|1|0|391 |
| Chr4 | exon | 21863714 | 21864889 | 21863714 | ID=MsG0480019540.01.T02:exon:10483;Parent=MsG0480019540.01.T02 |
| Chr4 | CDS | 21863714 | 21864889 | 21863714 | ID=MsG0480019540.01.T02:cds;Parent=MsG0480019540.01.T02 |
| Gene Sequence |
| Protein sequence |
