AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014129.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014129.01.T01 MTR_3g051220 94.888 313 14 1 1 313 1 311 0.0 598
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014129.01.T01 AT4G27030 61.842 304 87 2 26 310 27 320 4.85e-143 406
MsG0380014129.01.T01 AT1G62190 56.383 282 105 2 26 307 25 288 2.39e-121 350
MsG0380014129.01.T01 AT2G22890 61.390 259 89 2 44 301 31 279 6.81e-119 343

Find 98 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATCCACCGAACCTTTAA+TGG 0.119862 3:+50197298 None:intergenic
CATTGGGCCATTGATAATTA+TGG 0.132929 3:-50197203 MsG0380014129.01.T01:CDS
TCGTTGGGAGAGTCCATTAA+AGG 0.296680 3:-50197311 MsG0380014129.01.T01:CDS
GGTTACATCTTAGCTGATCT+TGG 0.300492 3:-50197239 MsG0380014129.01.T01:CDS
GCTACAAAACTTTGAACTAT+AGG 0.309088 3:+50197020 None:intergenic
ATGCAATAATTATTGTTATA+CGG 0.326577 3:+50196852 None:intergenic
ATGATCAATTGATTAACATT+AGG 0.351390 3:+50197467 None:intergenic
TCAATTTGAGCTCCAACTAA+TGG 0.382679 3:+50197167 None:intergenic
ATTGGCGGTTGTGCAAGTTT+CGG 0.384055 3:+50197440 None:intergenic
AATGGACAATGACCCTAGTT+TGG 0.384966 3:-50197390 MsG0380014129.01.T01:CDS
CCCATTGTGGCAGGTTGGAT+TGG 0.389600 3:-50197260 MsG0380014129.01.T01:CDS
AAAGAAGGGGTCATTAGGTT+TGG 0.391713 3:+50196679 None:intergenic
ATTGGGCCATTGATAATTAT+GGG 0.394460 3:-50197202 MsG0380014129.01.T01:CDS
GTTACATCTTAGCTGATCTT+GGG 0.396076 3:-50197238 MsG0380014129.01.T01:CDS
CGCAGCATGGGGCGCACCAC+CGG 0.398939 3:-50196878 MsG0380014129.01.T01:CDS
CACAACATTGCTCATTTCGT+TGG 0.401615 3:-50197327 MsG0380014129.01.T01:CDS
CGGAGCAATTGACGCGAATT+CGG 0.404513 3:+50197540 None:intergenic
CAATTTCATGCATGGGCTCA+TGG 0.419074 3:-50196966 MsG0380014129.01.T01:CDS
CAATTGATTAACATTAGGCT+TGG 0.429158 3:+50197472 None:intergenic
CTACAAAACTTTGAACTATA+GGG 0.432085 3:+50197021 None:intergenic
TTGGGTCCGGAGTTTACCAT+TGG 0.438101 3:-50197220 MsG0380014129.01.T01:CDS
TTAAACTTGGGGTTAGGCCT+AGG 0.445101 3:-50196758 MsG0380014129.01.T01:CDS
GGACTTCGTGGCAGTGGCAG+TGG 0.446991 3:+50197493 None:intergenic
AATAATTATTGCATAGTAAG+TGG 0.447132 3:-50196843 MsG0380014129.01.T01:CDS
ATCTTAGCTGATCTTGGGTC+CGG 0.450717 3:-50197233 MsG0380014129.01.T01:CDS
ATGGCCACTTATGATGGCCT+TGG 0.460295 3:+50197138 None:intergenic
TTGTGTCACGATCGCAGCAT+GGG 0.463100 3:-50196890 MsG0380014129.01.T01:CDS
AGGAATATCAGTGGTGGTGG+TGG 0.463882 3:+50197517 None:intergenic
TTTGCACTCACTTGCACGTA+TGG 0.464576 3:-50197084 MsG0380014129.01.T01:CDS
CCAATCCAACCTGCCACAAT+GGG 0.477372 3:+50197260 None:intergenic
TCGTGGAAAGCAAGATTGAT+AGG 0.478242 3:+50197044 None:intergenic
AACATTAGGCTTGGACTTCG+TGG 0.478835 3:+50197481 None:intergenic
TTCGTGGCAGTGGCAGTGGC+AGG 0.481587 3:+50197497 None:intergenic
GAAAACTCGGTGGTGAAAGC+TGG 0.482949 3:+50197583 None:intergenic
GGGAGAGTCCATTAAAGGTT+CGG 0.484592 3:-50197306 MsG0380014129.01.T01:CDS
ACAACATTGCTCATTTCGTT+GGG 0.487853 3:-50197326 MsG0380014129.01.T01:CDS
GACGAGTCAACACCATTAGT+TGG 0.493865 3:-50197179 MsG0380014129.01.T01:CDS
AGGCTTGGACTTCGTGGCAG+TGG 0.495124 3:+50197487 None:intergenic
GACCATGTTGATTCCAAACT+AGG 0.495633 3:+50197377 None:intergenic
CTTGTGTCACGATCGCAGCA+TGG 0.498266 3:-50196891 MsG0380014129.01.T01:CDS
AATTATTGTTATACGGTGGC+CGG 0.498638 3:+50196859 None:intergenic
TAGCCAACAATTTCATGCAT+GGG 0.501565 3:-50196973 MsG0380014129.01.T01:CDS
TGGTCCATGGCCACTTATGA+TGG 0.503500 3:+50197132 None:intergenic
TGGAGCCCATTGTGGCAGGT+TGG 0.503739 3:-50197265 MsG0380014129.01.T01:CDS
GGCAAATTGACGCTTAGTAA+TGG 0.504859 3:+50197112 None:intergenic
TCCTCTATCCACTCAGAAGA+AGG 0.504881 3:+50196723 None:intergenic
TGCAAGTGAGTGCAAATTGT+TGG 0.508200 3:+50197091 None:intergenic
AATATCAGTGGTGGTGGTGG+CGG 0.513006 3:+50197520 None:intergenic
GAGCCCATGCATGAAATTGT+TGG 0.514086 3:+50196970 None:intergenic
CAACATGGTCTCATCGAGCA+TGG 0.522244 3:-50197364 MsG0380014129.01.T01:CDS
TGGGTCCGGAGTTTACCATT+GGG 0.524693 3:-50197219 MsG0380014129.01.T01:CDS
GTCCATTGGACGGTTAGCAT+TGG 0.527444 3:+50197406 None:intergenic
CTCGTCCCCATAATTATCAA+TGG 0.530151 3:+50197196 None:intergenic
TGGGTGGAGCCCATTGTGGC+AGG 0.530501 3:-50197269 MsG0380014129.01.T01:CDS
ACCTTCTTCTGAGTGGATAG+AGG 0.532572 3:-50196724 MsG0380014129.01.T01:CDS
AAACTAGGGTCATTGTCCAT+TGG 0.532832 3:+50197392 None:intergenic
TGCACAACCGCCAATAAAAG+TGG 0.536589 3:-50197432 MsG0380014129.01.T01:CDS
AAGACACTTGTGTTGAACTA+AGG 0.537510 3:+50197607 None:intergenic
ACCAATCCAACCTGCCACAA+TGG 0.538608 3:+50197259 None:intergenic
GGCAGGAATATCAGTGGTGG+TGG 0.544012 3:+50197514 None:intergenic
CATAATTATCAATGGCCCAA+TGG 0.547046 3:+50197204 None:intergenic
CTTTCCAAGGCCATCATAAG+TGG 0.547599 3:-50197142 MsG0380014129.01.T01:CDS
CATCGAGCATGGGTGACAGT+TGG 0.553692 3:-50197353 MsG0380014129.01.T01:CDS
TTAGCCAACAATTTCATGCA+TGG 0.554178 3:-50196974 MsG0380014129.01.T01:CDS
AAGGCCATCATAAGTGGCCA+TGG 0.554715 3:-50197136 MsG0380014129.01.T01:CDS
AACCAATGCTAACCGTCCAA+TGG 0.570254 3:-50197408 MsG0380014129.01.T01:CDS
AACTTTGAACTATAGGGTCG+TGG 0.574981 3:+50197027 None:intergenic
TTGGGGTTAGGCCTAGGTCA+TGG 0.575041 3:-50196752 MsG0380014129.01.T01:CDS
AACATGGTCTCATCGAGCAT+GGG 0.579331 3:-50197363 MsG0380014129.01.T01:CDS
GTTCGGTGGATATGAATATG+TGG 0.581895 3:-50197289 MsG0380014129.01.T01:CDS
TAGTATTCTTTGTGAAAACT+CGG 0.583097 3:+50197570 None:intergenic
TGCAGAGCTACCACGAGCGG+TGG 0.597300 3:+50196927 None:intergenic
ACCATGTTGATTCCAAACTA+GGG 0.597315 3:+50197378 None:intergenic
AGCAATTGACGCGAATTCGG+TGG 0.602094 3:+50197543 None:intergenic
GCTCAAATTGAAGCTTTCCA+AGG 0.603696 3:-50197155 MsG0380014129.01.T01:CDS
TTCGGTGGATATGAATATGT+GGG 0.605318 3:-50197288 MsG0380014129.01.T01:CDS
GAGTAGGCTTCCACCGCTCG+TGG 0.605399 3:-50196937 MsG0380014129.01.T01:CDS
TATTGTTATACGGTGGCCGG+TGG 0.605796 3:+50196862 None:intergenic
AAAACTCGGTGGTGAAAGCT+GGG 0.608923 3:+50197584 None:intergenic
TGACGCTTAGTAATGGTCCA+TGG 0.614082 3:+50197119 None:intergenic
TCTTGCAGAGCTACCACGAG+CGG 0.618762 3:+50196924 None:intergenic
GGGCTCATGGAACAAAGAGT+AGG 0.618905 3:-50196953 MsG0380014129.01.T01:CDS
ATTGCATAGTAAGTGGAGTG+TGG 0.622359 3:-50196836 MsG0380014129.01.T01:CDS
GAAGGTTCACTCCATGACCT+AGG 0.625361 3:+50196741 None:intergenic
TAGGGTCATTGTCCATTGGA+CGG 0.625760 3:+50197396 None:intergenic
TTGGGCCATTGATAATTATG+GGG 0.630571 3:-50197201 MsG0380014129.01.T01:CDS
TGTGTCACGATCGCAGCATG+GGG 0.632427 3:-50196889 MsG0380014129.01.T01:CDS
AGAGTCCATTAAAGGTTCGG+TGG 0.634876 3:-50197303 MsG0380014129.01.T01:CDS
AATGGCCCAATGGTAAACTC+CGG 0.657151 3:+50197214 None:intergenic
CAATAATTATTGTTATACGG+TGG 0.658733 3:+50196855 None:intergenic
GGAGTGAACCTTCTTCTGAG+TGG 0.663604 3:-50196731 MsG0380014129.01.T01:CDS
GGCAGTGGCAGGAATATCAG+TGG 0.670487 3:+50197508 None:intergenic
ACCCTAGTTTGGAATCAACA+TGG 0.676174 3:-50197379 MsG0380014129.01.T01:CDS
AGTGGCAGGAATATCAGTGG+TGG 0.694039 3:+50197511 None:intergenic
TATTCTTTGTGAAAACTCGG+TGG 0.701600 3:+50197573 None:intergenic
GTGGTAGCTCTGCAAGACAG+CGG 0.702099 3:-50196918 MsG0380014129.01.T01:CDS
GGTGGATATGAATATGTGGG+TGG 0.711695 3:-50197285 MsG0380014129.01.T01:CDS
TATGTGGGTGGAGCCCATTG+TGG 0.747445 3:-50197273 MsG0380014129.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCAATAATTATTGTTATA+CGG + Chr3:50197457-50197476 None:intergenic 15.0%
!!! ATGATATTGTATTTTAAACT+TGG - Chr3:50197535-50197554 MsG0380014129.01.T01:CDS 15.0%
!!! TGATATTGTATTTTAAACTT+GGG - Chr3:50197536-50197555 MsG0380014129.01.T01:CDS 15.0%
!! AATAATTATTGCATAGTAAG+TGG - Chr3:50197463-50197482 MsG0380014129.01.T01:CDS 20.0%
!! ATGATCAATTGATTAACATT+AGG + Chr3:50196842-50196861 None:intergenic 20.0%
!!! GATATTGTATTTTAAACTTG+GGG - Chr3:50197537-50197556 MsG0380014129.01.T01:CDS 20.0%
! CAATAATTATTGTTATACGG+TGG + Chr3:50197454-50197473 None:intergenic 25.0%
! CTACAAAACTTTGAACTATA+GGG + Chr3:50197288-50197307 None:intergenic 25.0%
! TAGTATTCTTTGTGAAAACT+CGG + Chr3:50196739-50196758 None:intergenic 25.0%
!!! TATAGTTCAAAGTTTTGTAG+CGG - Chr3:50197288-50197307 MsG0380014129.01.T01:CDS 25.0%
CAATTGATTAACATTAGGCT+TGG + Chr3:50196837-50196856 None:intergenic 30.0%
GCTACAAAACTTTGAACTAT+AGG + Chr3:50197289-50197308 None:intergenic 30.0%
! ATTGGGCCATTGATAATTAT+GGG - Chr3:50197104-50197123 MsG0380014129.01.T01:CDS 30.0%
!! TGTATTTTAAACTTGGGGTT+AGG - Chr3:50197542-50197561 MsG0380014129.01.T01:CDS 30.0%
!!! AAGTAAAGCTTTTGAAGCTA+TGG - Chr3:50197510-50197529 MsG0380014129.01.T01:CDS 30.0%
AAGACACTTGTGTTGAACTA+AGG + Chr3:50196702-50196721 None:intergenic 35.0%
AATTATTGTTATACGGTGGC+CGG + Chr3:50197450-50197469 None:intergenic 35.0%
ACAACATTGCTCATTTCGTT+GGG - Chr3:50196980-50196999 MsG0380014129.01.T01:CDS 35.0%
CATAATTATCAATGGCCCAA+TGG + Chr3:50197105-50197124 None:intergenic 35.0%
GTTACATCTTAGCTGATCTT+GGG - Chr3:50197068-50197087 MsG0380014129.01.T01:CDS 35.0%
TAGCCAACAATTTCATGCAT+GGG - Chr3:50197333-50197352 MsG0380014129.01.T01:CDS 35.0%
TATTCTTTGTGAAAACTCGG+TGG + Chr3:50196736-50196755 None:intergenic 35.0%
TCAATTTGAGCTCCAACTAA+TGG + Chr3:50197142-50197161 None:intergenic 35.0%
TTAGCCAACAATTTCATGCA+TGG - Chr3:50197332-50197351 MsG0380014129.01.T01:CDS 35.0%
TTCGGTGGATATGAATATGT+GGG - Chr3:50197018-50197037 MsG0380014129.01.T01:CDS 35.0%
! CATTGGGCCATTGATAATTA+TGG - Chr3:50197103-50197122 MsG0380014129.01.T01:CDS 35.0%
! TTGGGCCATTGATAATTATG+GGG - Chr3:50197105-50197124 MsG0380014129.01.T01:CDS 35.0%
!! ACCATGTTGATTCCAAACTA+GGG + Chr3:50196931-50196950 None:intergenic 35.0%
!! TTGGTTACCACTTTTATTGG+CGG + Chr3:50196884-50196903 None:intergenic 35.0%
!!! GCATTGGTTACCACTTTTAT+TGG + Chr3:50196887-50196906 None:intergenic 35.0%
AAACTAGGGTCATTGTCCAT+TGG + Chr3:50196917-50196936 None:intergenic 40.0%
AACTTTGAACTATAGGGTCG+TGG + Chr3:50197282-50197301 None:intergenic 40.0%
AATGGACAATGACCCTAGTT+TGG - Chr3:50196916-50196935 MsG0380014129.01.T01:CDS 40.0%
ATTGCATAGTAAGTGGAGTG+TGG - Chr3:50197470-50197489 MsG0380014129.01.T01:CDS 40.0%
CACAACATTGCTCATTTCGT+TGG - Chr3:50196979-50196998 MsG0380014129.01.T01:CDS 40.0%
CATATCCACCGAACCTTTAA+TGG + Chr3:50197011-50197030 None:intergenic 40.0%
CTCGTCCCCATAATTATCAA+TGG + Chr3:50197113-50197132 None:intergenic 40.0%
GCTCAAATTGAAGCTTTCCA+AGG - Chr3:50197151-50197170 MsG0380014129.01.T01:CDS 40.0%
GGCAAATTGACGCTTAGTAA+TGG + Chr3:50197197-50197216 None:intergenic 40.0%
GGTTACATCTTAGCTGATCT+TGG - Chr3:50197067-50197086 MsG0380014129.01.T01:CDS 40.0%
TCGTGGAAAGCAAGATTGAT+AGG + Chr3:50197265-50197284 None:intergenic 40.0%
TGCAAGTGAGTGCAAATTGT+TGG + Chr3:50197218-50197237 None:intergenic 40.0%
! ACCCTAGTTTGGAATCAACA+TGG - Chr3:50196927-50196946 MsG0380014129.01.T01:CDS 40.0%
! GTTCGGTGGATATGAATATG+TGG - Chr3:50197017-50197036 MsG0380014129.01.T01:CDS 40.0%
! TGGAGTGTGGAATGAGTTTT+TGG - Chr3:50197483-50197502 MsG0380014129.01.T01:CDS 40.0%
!! GACCATGTTGATTCCAAACT+AGG + Chr3:50196932-50196951 None:intergenic 40.0%
AACATGGTCTCATCGAGCAT+GGG - Chr3:50196943-50196962 MsG0380014129.01.T01:CDS 45.0%
AACATTAGGCTTGGACTTCG+TGG + Chr3:50196828-50196847 None:intergenic 45.0%
AACCAATGCTAACCGTCCAA+TGG - Chr3:50196898-50196917 MsG0380014129.01.T01:CDS 45.0%
AATGGCCCAATGGTAAACTC+CGG + Chr3:50197095-50197114 None:intergenic 45.0%
ACCTTCTTCTGAGTGGATAG+AGG - Chr3:50197582-50197601 MsG0380014129.01.T01:CDS 45.0%
AGAGTCCATTAAAGGTTCGG+TGG - Chr3:50197003-50197022 MsG0380014129.01.T01:CDS 45.0%
ATCTTAGCTGATCTTGGGTC+CGG - Chr3:50197073-50197092 MsG0380014129.01.T01:CDS 45.0%
ATTGGCGGTTGTGCAAGTTT+CGG + Chr3:50196869-50196888 None:intergenic 45.0%
CAATTTCATGCATGGGCTCA+TGG - Chr3:50197340-50197359 MsG0380014129.01.T01:CDS 45.0%
CTTTCCAAGGCCATCATAAG+TGG - Chr3:50197164-50197183 MsG0380014129.01.T01:CDS 45.0%
GACGAGTCAACACCATTAGT+TGG - Chr3:50197127-50197146 MsG0380014129.01.T01:CDS 45.0%
GAGCCCATGCATGAAATTGT+TGG + Chr3:50197339-50197358 None:intergenic 45.0%
GGGAGAGTCCATTAAAGGTT+CGG - Chr3:50197000-50197019 MsG0380014129.01.T01:CDS 45.0%
GGTGGATATGAATATGTGGG+TGG - Chr3:50197021-50197040 MsG0380014129.01.T01:CDS 45.0%
TAGGGTCATTGTCCATTGGA+CGG + Chr3:50196913-50196932 None:intergenic 45.0%
TCCTCTATCCACTCAGAAGA+AGG + Chr3:50197586-50197605 None:intergenic 45.0%
TCGTTGGGAGAGTCCATTAA+AGG - Chr3:50196995-50197014 MsG0380014129.01.T01:CDS 45.0%
TGACGCTTAGTAATGGTCCA+TGG + Chr3:50197190-50197209 None:intergenic 45.0%
TGCACAACCGCCAATAAAAG+TGG - Chr3:50196874-50196893 MsG0380014129.01.T01:CDS 45.0%
TTAAACTTGGGGTTAGGCCT+AGG - Chr3:50197548-50197567 MsG0380014129.01.T01:CDS 45.0%
TTTGCACTCACTTGCACGTA+TGG - Chr3:50197222-50197241 MsG0380014129.01.T01:CDS 45.0%
! AAAACTCGGTGGTGAAAGCT+GGG + Chr3:50196725-50196744 None:intergenic 45.0%
AAGGCCATCATAAGTGGCCA+TGG - Chr3:50197170-50197189 MsG0380014129.01.T01:CDS 50.0%
ACCAATCCAACCTGCCACAA+TGG + Chr3:50197050-50197069 None:intergenic 50.0%
AGCAATTGACGCGAATTCGG+TGG + Chr3:50196766-50196785 None:intergenic 50.0%
AGTGGCAGGAATATCAGTGG+TGG + Chr3:50196798-50196817 None:intergenic 50.0%
ATGGCCACTTATGATGGCCT+TGG + Chr3:50197171-50197190 None:intergenic 50.0%
CAACATGGTCTCATCGAGCA+TGG - Chr3:50196942-50196961 MsG0380014129.01.T01:CDS 50.0%
CCAATCCAACCTGCCACAAT+GGG + Chr3:50197049-50197068 None:intergenic 50.0%
CGGAGCAATTGACGCGAATT+CGG + Chr3:50196769-50196788 None:intergenic 50.0%
GAAGGTTCACTCCATGACCT+AGG + Chr3:50197568-50197587 None:intergenic 50.0%
GGAGTGAACCTTCTTCTGAG+TGG - Chr3:50197575-50197594 MsG0380014129.01.T01:CDS 50.0%
GGGCTCATGGAACAAAGAGT+AGG - Chr3:50197353-50197372 MsG0380014129.01.T01:CDS 50.0%
GTCCATTGGACGGTTAGCAT+TGG + Chr3:50196903-50196922 None:intergenic 50.0%
TATTGTTATACGGTGGCCGG+TGG + Chr3:50197447-50197466 None:intergenic 50.0%
TGGGTCCGGAGTTTACCATT+GGG - Chr3:50197087-50197106 MsG0380014129.01.T01:CDS 50.0%
TGGTCCATGGCCACTTATGA+TGG + Chr3:50197177-50197196 None:intergenic 50.0%
TTGGGTCCGGAGTTTACCAT+TGG - Chr3:50197086-50197105 MsG0380014129.01.T01:CDS 50.0%
TTGTGTCACGATCGCAGCAT+GGG - Chr3:50197416-50197435 MsG0380014129.01.T01:CDS 50.0%
! GAAAACTCGGTGGTGAAAGC+TGG + Chr3:50196726-50196745 None:intergenic 50.0%
!! AATATCAGTGGTGGTGGTGG+CGG + Chr3:50196789-50196808 None:intergenic 50.0%
!! AGGAATATCAGTGGTGGTGG+TGG + Chr3:50196792-50196811 None:intergenic 50.0%
CATCGAGCATGGGTGACAGT+TGG - Chr3:50196953-50196972 MsG0380014129.01.T01:CDS 55.0%
CTTGTGTCACGATCGCAGCA+TGG - Chr3:50197415-50197434 MsG0380014129.01.T01:CDS 55.0%
GGCAGGAATATCAGTGGTGG+TGG + Chr3:50196795-50196814 None:intergenic 55.0%
GGCAGTGGCAGGAATATCAG+TGG + Chr3:50196801-50196820 None:intergenic 55.0%
TATGTGGGTGGAGCCCATTG+TGG - Chr3:50197033-50197052 MsG0380014129.01.T01:CDS 55.0%
TCTTGCAGAGCTACCACGAG+CGG + Chr3:50197385-50197404 None:intergenic 55.0%
TGTGTCACGATCGCAGCATG+GGG - Chr3:50197417-50197436 MsG0380014129.01.T01:CDS 55.0%
TTGGGGTTAGGCCTAGGTCA+TGG - Chr3:50197554-50197573 MsG0380014129.01.T01:CDS 55.0%
! CCCATTGTGGCAGGTTGGAT+TGG - Chr3:50197046-50197065 MsG0380014129.01.T01:CDS 55.0%
! GTGGTAGCTCTGCAAGACAG+CGG - Chr3:50197388-50197407 MsG0380014129.01.T01:CDS 55.0%
!! AGTTTTGTAGCGGTGTGCGC+TGG - Chr3:50197298-50197317 MsG0380014129.01.T01:CDS 55.0%
AGGCTTGGACTTCGTGGCAG+TGG + Chr3:50196822-50196841 None:intergenic 60.0%
TGGAGCCCATTGTGGCAGGT+TGG - Chr3:50197041-50197060 MsG0380014129.01.T01:CDS 60.0%
GAGTAGGCTTCCACCGCTCG+TGG - Chr3:50197369-50197388 MsG0380014129.01.T01:CDS 65.0%
GGACTTCGTGGCAGTGGCAG+TGG + Chr3:50196816-50196835 None:intergenic 65.0%
TGCAGAGCTACCACGAGCGG+TGG + Chr3:50197382-50197401 None:intergenic 65.0%
TGGGTGGAGCCCATTGTGGC+AGG - Chr3:50197037-50197056 MsG0380014129.01.T01:CDS 65.0%
TTCGTGGCAGTGGCAGTGGC+AGG + Chr3:50196812-50196831 None:intergenic 65.0%
CGCAGCATGGGGCGCACCAC+CGG - Chr3:50197428-50197447 MsG0380014129.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 50196692 50197636 50196692 ID=MsG0380014129.01;Name=MsG0380014129.01
Chr3 mRNA 50196692 50197636 50196692 ID=MsG0380014129.01.T01;Parent=MsG0380014129.01;Name=MsG0380014129.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|314
Chr3 exon 50196692 50197636 50196692 ID=MsG0380014129.01.T01:exon:9613;Parent=MsG0380014129.01.T01
Chr3 CDS 50196692 50197636 50196692 ID=MsG0380014129.01.T01:cds;Parent=MsG0380014129.01.T01
Gene Sequence

>MsG0380014129.01.T01

ATGTCTTCCTTAGTTCAACACAAGTGTCTTCCCAGCTTTCACCACCGAGTTTTCACAAAGAATACTATCATCCACCGAATTCGCGTCAATTGCTCCGCCACCACCACCACTGATATTCCTGCCACTGCCACTGCCACGAAGTCCAAGCCTAATGTTAATCAATTGATCATTGAGCCGAAACTTGCACAACCGCCAATAAAAGTGGTAACCAATGCTAACCGTCCAATGGACAATGACCCTAGTTTGGAATCAACATGGTCTCATCGAGCATGGGTGACAGTTGGATGCACAACATTGCTCATTTCGTTGGGAGAGTCCATTAAAGGTTCGGTGGATATGAATATGTGGGTGGAGCCCATTGTGGCAGGTTGGATTGGTTACATCTTAGCTGATCTTGGGTCCGGAGTTTACCATTGGGCCATTGATAATTATGGGGACGAGTCAACACCATTAGTTGGAGCTCAAATTGAAGCTTTCCAAGGCCATCATAAGTGGCCATGGACCATTACTAAGCGTCAATTTGCCAACAATTTGCACTCACTTGCACGTATGGTAACTTTTGTAGTGCTTCCTATCAATCTTGCTTTCCACGACCCTATAGTTCAAAGTTTTGTAGCGGTGTGCGCTGGTTGTATTATGTTTAGCCAACAATTTCATGCATGGGCTCATGGAACAAAGAGTAGGCTTCCACCGCTCGTGGTAGCTCTGCAAGACAGCGGAGTGCTTGTGTCACGATCGCAGCATGGGGCGCACCACCGGCCACCGTATAACAATAATTATTGCATAGTAAGTGGAGTGTGGAATGAGTTTTTGGATAAAAGTAAAGCTTTTGAAGCTATGGAAATGATATTGTATTTTAAACTTGGGGTTAGGCCTAGGTCATGGAGTGAACCTTCTTCTGAGTGGATAGAGGAGATTGAGATTGCTTCTCAAAGCCAAACCTAA

Protein sequence

>MsG0380014129.01.T01

MSSLVQHKCLPSFHHRVFTKNTIIHRIRVNCSATTTTDIPATATATKSKPNVNQLIIEPKLAQPPIKVVTNANRPMDNDPSLESTWSHRAWVTVGCTTLLISLGESIKGSVDMNMWVEPIVAGWIGYILADLGSGVYHWAIDNYGDESTPLVGAQIEAFQGHHKWPWTITKRQFANNLHSLARMVTFVVLPINLAFHDPIVQSFVAVCAGCIMFSQQFHAWAHGTKSRLPPLVVALQDSGVLVSRSQHGAHHRPPYNNNYCIVSGVWNEFLDKSKAFEAMEMILYFKLGVRPRSWSEPSSEWIEEIEIASQSQT*