AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047251.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047251.01.T01 MTR_4g123930 93.851 309 16 1 1 306 1 309 0.0 587
MsG0880047251.01.T01 MTR_4g123930 93.851 309 16 1 1 306 1 309 0.0 586
MsG0880047251.01.T01 MTR_4g123930 96.089 179 7 0 128 306 1 179 4.55e-122 353
MsG0880047251.01.T01 MTR_4g123930 96.089 179 7 0 128 306 1 179 5.87e-121 355
MsG0880047251.01.T01 MTR_7g108940 27.692 195 124 4 117 304 175 359 1.48e-18 86.7
MsG0880047251.01.T01 MTR_7g108940 27.692 195 124 4 117 304 175 359 2.12e-18 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047251.01.T01 AT3G17470 67.068 249 80 1 59 305 57 305 3.99e-116 342
MsG0880047251.01.T01 AT3G17470 67.068 249 80 1 59 305 72 320 2.95e-114 342
MsG0880047251.01.T01 AT3G17470 67.068 249 80 1 59 305 57 305 2.95e-114 342
MsG0880047251.01.T01 AT4G02260 26.667 195 126 4 117 304 177 361 1.84e-16 80.5
MsG0880047251.01.T01 AT4G02260 26.667 195 126 4 117 304 177 361 2.03e-16 80.1
MsG0880047251.01.T01 AT4G02260 26.667 195 126 4 117 304 177 361 2.03e-16 80.1
MsG0880047251.01.T01 AT4G02260 26.667 195 126 4 117 304 177 361 2.05e-16 80.1
MsG0880047251.01.T01 AT1G54130 31.250 160 98 2 109 260 234 389 1.27e-12 68.6
MsG0880047251.01.T01 AT3G14050 28.824 170 108 3 110 270 230 395 2.48e-12 67.8

Find 159 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATGTTAATGTCATATTT+TGG 0.088228 8:+83802466 MsG0880047251.01.T01:three_prime_UTR
TGACATTAGAGCTTTGATTT+TGG 0.217842 8:+83800655 MsG0880047251.01.T01:CDS
GACCCTCAACCTATCCTTAA+AGG 0.231562 8:+83802307 MsG0880047251.01.T01:three_prime_UTR
GCCTTCCACGAATATCTTAT+AGG 0.237824 8:+83802259 MsG0880047251.01.T01:three_prime_UTR
ATCCACTAATTCCGCAAGTA+TGG 0.260826 8:-83800954 None:intergenic
AGCACATCATTTACATCTTC+TGG 0.271709 8:-83801047 None:intergenic
CATGCTGGCTGCAGCTGAAC+TGG 0.295606 8:+83801569 MsG0880047251.01.T01:three_prime_UTR
CATGCTTCTCGCTGATCTTC+AGG 0.298040 8:+83799432 MsG0880047251.01.T01:CDS
GCAGTGGATGTAAGTGAAAT+TGG 0.300443 8:+83801242 MsG0880047251.01.T01:three_prime_UTR
TAACTACATATCACTTGAAT+TGG 0.301558 8:+83800796 MsG0880047251.01.T01:CDS
CAGGTATATAATAAGGAGTT+TGG 0.304931 8:+83802151 MsG0880047251.01.T01:three_prime_UTR
TTCCTCTTTACAAACGGTTC+TGG 0.309806 8:-83802350 None:intergenic
TTGAATTATAAGATAATAAC+AGG 0.319299 8:-83802447 None:intergenic
TTTCCAAGTGCAAATCATAA+AGG 0.319956 8:+83801611 MsG0880047251.01.T01:three_prime_UTR
TTTGCACTTGGAAAATCTTT+AGG 0.326576 8:-83801602 None:intergenic
GAAGTTTCATCCACAAATAT+TGG 0.331515 8:+83798978 None:intergenic
TTTAATTCAGGTATATAATA+AGG 0.339845 8:+83802144 MsG0880047251.01.T01:three_prime_UTR
AGAGGAGAGCTTTGAAGAAC+AGG 0.345980 8:-83799364 None:intergenic
TGCATCTAGAGTAGACATTC+TGG 0.356083 8:+83800586 MsG0880047251.01.T01:CDS
TCCACATAAAGATATGAATA+AGG 0.356386 8:-83800845 None:intergenic
GGATTTCTTTCCACATAGAT+TGG 0.373050 8:-83801157 None:intergenic
AATGCATTATCTCCAGACTT+AGG 0.376086 8:-83801092 None:intergenic
AGGTTCTGCTACTGCTCATT+TGG 0.380091 8:+83800535 MsG0880047251.01.T01:CDS
CTGGAGAGAGAGCGTGCTAC+AGG 0.382710 8:+83801120 MsG0880047251.01.T01:three_prime_UTR
TTCCAAGTGCAAATCATAAA+GGG 0.388198 8:+83801612 MsG0880047251.01.T01:three_prime_UTR
TGGGAGGACTAGACCCTTGA+TGG 0.390942 8:+83801262 MsG0880047251.01.T01:three_prime_UTR
GATTATATTGCCAGGCCAAA+AGG 0.405490 8:+83801194 MsG0880047251.01.T01:three_prime_UTR
ACAGATAAGAACTACTGAAA+TGG 0.407491 8:+83801289 MsG0880047251.01.T01:three_prime_UTR
TGATGAATACAAGAAAATAT+TGG 0.408026 8:+83802091 MsG0880047251.01.T01:three_prime_UTR
AGATGATAGTGGTTTAATTC+AGG 0.409345 8:+83802132 MsG0880047251.01.T01:three_prime_UTR
CATATCTTTATGTGGATACA+TGG 0.412806 8:+83800852 MsG0880047251.01.T01:CDS
CGAGATGGTTCGTAATTTAG+AGG 0.415458 8:+83802061 MsG0880047251.01.T01:three_prime_UTR
AGCCAGAACCGTTTGTAAAG+AGG 0.417258 8:+83802348 MsG0880047251.01.T01:three_prime_UTR
TAGTGGATGATCTCAGTTAA+AGG 0.419868 8:+83800969 MsG0880047251.01.T01:CDS
AGGCAAATCTTATACACAAT+TGG 0.421178 8:-83802240 None:intergenic
ACCCTCAACCTATCCTTAAA+GGG 0.428322 8:+83802308 MsG0880047251.01.T01:three_prime_UTR
TTGAGAGAGGTGTTGGAAGT+AGG 0.431304 8:+83800479 MsG0880047251.01.T01:CDS
ACTTCTACAGCACACGCTCT+TGG 0.441837 8:-83799220 None:intergenic
CACAATGAAGAAGCTCTTGA+AGG 0.442293 8:+83801013 MsG0880047251.01.T01:three_prime_UTR
ATGCATTATCTCCAGACTTA+GGG 0.442953 8:-83801091 None:intergenic
ATGGTGGCGCGTGGGGTAAT+CGG 0.443215 8:-83799098 None:intergenic
TCCCATACTTGCGGAATTAG+TGG 0.444671 8:+83800952 MsG0880047251.01.T01:CDS
ATGATCTGCTGCTGATACCT+TGG 0.450610 8:-83800722 None:intergenic
CATGGCAATGGATAAAGCTT+TGG 0.451814 8:-83799413 None:intergenic
AAACACAACACCAATATTTG+TGG 0.453363 8:-83798988 None:intergenic
AAGAAAACACTAACCTCCTC+TGG 0.456445 8:-83801371 None:intergenic
TCCTTATTCATATCTTTATG+TGG 0.459286 8:+83800844 MsG0880047251.01.T01:CDS
ATGTCATGTGCATCTTCTCC+TGG 0.459375 8:-83801739 None:intergenic
AAAATATTCCTCTTTACAAA+CGG 0.460364 8:-83802356 None:intergenic
CTTGACATGATGAGGCATCT+TGG 0.461356 8:+83800692 MsG0880047251.01.T01:CDS
TCTTATCTGTATTTCCATCA+AGG 0.463566 8:-83801276 None:intergenic
GCGTGTGCTGTAGAAGTTCC+CGG 0.464036 8:+83799226 MsG0880047251.01.T01:CDS
AGCACACGCTCTTGGAGTAC+TGG 0.464908 8:-83799212 None:intergenic
CATGAAGTTCGAAGTCAGAT+AGG 0.464988 8:+83800515 MsG0880047251.01.T01:CDS
TGGATACAAAAGTTTGCATA+TGG 0.465288 8:+83801220 MsG0880047251.01.T01:three_prime_UTR
GGAACTTACAGAGGTGATAG+AGG 0.467883 8:+83801705 MsG0880047251.01.T01:three_prime_UTR
CTTCATATGGCAGATGATAG+TGG 0.471188 8:+83802121 MsG0880047251.01.T01:three_prime_UTR
GAACGACCATCAGGAGTAAG+AGG 0.473153 8:-83799382 None:intergenic
ATTATATTGCCAGGCCAAAA+GGG 0.474542 8:+83801195 MsG0880047251.01.T01:three_prime_UTR
GTGACGCGGGTGGGTCGAGT+GGG 0.475192 8:-83799175 None:intergenic
TGCTCCTCTTGCTCATGCTG+TGG 0.479821 8:+83800769 MsG0880047251.01.T01:CDS
ATAATAAGGAGTTTGGCAAC+AGG 0.480517 8:+83802158 MsG0880047251.01.T01:three_prime_UTR
CCCCTTTAAGGATAGGTTGA+GGG 0.481740 8:-83802309 None:intergenic
GTGTTATCCACAAGTTCCTC+TGG 0.484331 8:+83799310 MsG0880047251.01.T01:CDS
TGAATGTAATGTAATGTTGT+TGG 0.484720 8:-83799022 None:intergenic
AGCTCTCCTCTTACTCCTGA+TGG 0.487226 8:+83799376 MsG0880047251.01.T01:CDS
GAAAGAGGAGAACGACCATC+AGG 0.488013 8:-83799391 None:intergenic
TATCACCATCTTTCCTCCAC+CGG 0.490068 8:-83799245 None:intergenic
GGAGATAATGCATTGGAAGC+TGG 0.491096 8:+83801101 MsG0880047251.01.T01:three_prime_UTR
TATTGGATGAGAACTTCATA+TGG 0.492713 8:+83802108 MsG0880047251.01.T01:three_prime_UTR
GGTGACGCGGGTGGGTCGAG+TGG 0.492820 8:-83799176 None:intergenic
GTGGTGTTGAACCCTAAGTC+TGG 0.496487 8:+83801080 MsG0880047251.01.T01:three_prime_UTR
TGTGGAAAGAAATCCCTTCT+CGG 0.498703 8:+83801165 MsG0880047251.01.T01:three_prime_UTR
CAGTGGATGTAAGTGAAATT+GGG 0.501702 8:+83801243 MsG0880047251.01.T01:three_prime_UTR
TGGTTTGTTTGAGAAGAGAA+TGG 0.502046 8:-83799117 None:intergenic
TAAGCGGTGATGAGTGGTAG+TGG 0.504875 8:-83799137 None:intergenic
GATGCAGAAGTTATATCTGC+TGG 0.508548 8:+83800452 MsG0880047251.01.T01:CDS
ACTCGACCCACCCGCGTCAC+CGG 0.513152 8:+83799178 MsG0880047251.01.T01:CDS
GGATACATGGTTGAGAAGTC+AGG 0.514914 8:+83800865 MsG0880047251.01.T01:CDS
ATAGAGGAGCTTGGTGCACC+AGG 0.521684 8:+83801721 MsG0880047251.01.T01:three_prime_UTR
CTTATCTGTATTTCCATCAA+GGG 0.524648 8:-83801275 None:intergenic
CCGGAGACCGGTGACGCGGG+TGG 0.524804 8:-83799185 None:intergenic
ATCCCTTTATGATTTGCACT+TGG 0.525949 8:-83801614 None:intergenic
TGAGAGTAAGCGGTGATGAG+TGG 0.526801 8:-83799143 None:intergenic
GCTCCTCTTGCTCATGCTGT+GGG 0.528069 8:+83800770 MsG0880047251.01.T01:CDS
CATCTCCGTTCTTGTCGAGA+AGG 0.531300 8:-83801667 None:intergenic
CAAAAGTTTGCATATGGCAG+TGG 0.532210 8:+83801226 MsG0880047251.01.T01:three_prime_UTR
CCACCCGCGTCACCGGTCTC+CGG 0.535267 8:+83799185 MsG0880047251.01.T01:CDS
AGTTCCCGGTGGAGGAAAGA+TGG 0.535806 8:+83799240 MsG0880047251.01.T01:CDS
ATTGCCAGGCCAAAAGGGAA+TGG 0.535893 8:+83801200 MsG0880047251.01.T01:three_prime_UTR
ATGGATAGGTTAGCTGTTGG+TGG 0.537695 8:+83801308 MsG0880047251.01.T01:three_prime_UTR
TCTCATTCATTATACAAGGC+TGG 0.539860 8:+83801338 MsG0880047251.01.T01:three_prime_UTR
GGAAGAAGAGTGAGAGTAAG+CGG 0.541797 8:-83799153 None:intergenic
AAGAAGACCAGAGGAACTTG+TGG 0.542935 8:-83799317 None:intergenic
CTTCTTGACTCGAACAGTGA+TGG 0.544084 8:+83801769 MsG0880047251.01.T01:three_prime_UTR
TTTCGCCTTCTCGACAAGAA+CGG 0.544865 8:+83801662 MsG0880047251.01.T01:three_prime_UTR
CTCTTGGAGTACTGGACCAC+CGG 0.545724 8:-83799204 None:intergenic
GGCATCTTGGTCACCTTCCA+AGG 0.547221 8:+83800705 MsG0880047251.01.T01:CDS
ATGGATAAAGCTTTGGAAAG+AGG 0.547465 8:-83799406 None:intergenic
TAGGTTAGCTGTTGGTGGAA+TGG 0.547704 8:+83801313 MsG0880047251.01.T01:three_prime_UTR
GGACTAAAGATTATATTGCC+AGG 0.550792 8:+83801186 MsG0880047251.01.T01:three_prime_UTR
CTGAAATTCATCAGAGCTGA+GGG 0.550894 8:-83801794 None:intergenic
ATCACCATCTTTCCTCCACC+GGG 0.551354 8:-83799244 None:intergenic
TCCACTAATTCCGCAAGTAT+GGG 0.553251 8:-83800953 None:intergenic
GCTGTAGAAGTTCCCGGTGG+AGG 0.555769 8:+83799232 MsG0880047251.01.T01:CDS
TGACGCGGGTGGGTCGAGTG+GGG 0.558230 8:-83799174 None:intergenic
ATCAGCGAGAAGCATGGCAA+TGG 0.559213 8:-83799425 None:intergenic
ATCAAATCATCCAATCTATG+TGG 0.562146 8:+83801147 MsG0880047251.01.T01:three_prime_UTR
CTTCTCGACAAGAACGGAGA+TGG 0.567014 8:+83801668 MsG0880047251.01.T01:three_prime_UTR
GAAGATGTAAATGATGTGCT+TGG 0.567130 8:+83801050 MsG0880047251.01.T01:three_prime_UTR
CTTTGAAGCTTGACATGATG+AGG 0.569527 8:+83800684 MsG0880047251.01.T01:CDS
AGAGCTTTGAAGAACAGGAA+TGG 0.570567 8:-83799359 None:intergenic
TGGAATATTGAGAGAGGTGT+TGG 0.571119 8:+83800472 MsG0880047251.01.T01:CDS
AGTATCCTATAAGATATTCG+TGG 0.573789 8:-83802264 None:intergenic
TAAGAACTACTGAAATGGAT+AGG 0.574391 8:+83801294 MsG0880047251.01.T01:three_prime_UTR
TATAATCTTTAGTCCGAGAA+GGG 0.574454 8:-83801178 None:intergenic
GGCATCTCATTCATTATACA+AGG 0.575422 8:+83801334 MsG0880047251.01.T01:three_prime_UTR
GAGAAGAGAATGGTGGCGCG+TGG 0.575660 8:-83799107 None:intergenic
CTCACTTAGATAATCTATTG+TGG 0.576514 8:+83802285 MsG0880047251.01.T01:three_prime_UTR
TTCAGCTGCAGCCAGCATGA+TGG 0.579396 8:-83801565 None:intergenic
AGTACTGGACCACCGGAGAC+CGG 0.579842 8:-83799197 None:intergenic
AGAAGAGAATGGTGGCGCGT+GGG 0.580259 8:-83799106 None:intergenic
ACCACCGGAGACCGGTGACG+CGG 0.582141 8:-83799189 None:intergenic
ATGAAGAAGCTCTTGAAGGA+TGG 0.584555 8:+83801017 MsG0880047251.01.T01:three_prime_UTR
ATATAATCTTTAGTCCGAGA+AGG 0.585270 8:-83801179 None:intergenic
TGGTTGAGAAGTCAGGAGAC+AGG 0.587107 8:+83800872 MsG0880047251.01.T01:CDS
ATTCCCACAGCATGAGCAAG+AGG 0.587161 8:-83800773 None:intergenic
CGGAGACCGGTGACGCGGGT+GGG 0.591943 8:-83799184 None:intergenic
TAAGTCTGGAGATAATGCAT+TGG 0.596696 8:+83801094 MsG0880047251.01.T01:three_prime_UTR
GCGTTTAAAGACCATCATGC+TGG 0.599824 8:+83801554 MsG0880047251.01.T01:three_prime_UTR
CCACCGGAGACCGGTGACGC+GGG 0.602844 8:-83799188 None:intergenic
AGAAGCTCTTGAAGGATGGT+CGG 0.606805 8:+83801021 MsG0880047251.01.T01:three_prime_UTR
TGGAGAGAGAGCGTGCTACA+GGG 0.607107 8:+83801121 MsG0880047251.01.T01:three_prime_UTR
TCCTATAAGATATTCGTGGA+AGG 0.611103 8:-83802260 None:intergenic
GAAGAGAATGGTGGCGCGTG+GGG 0.611821 8:-83799105 None:intergenic
ACAGAGGTGATAGAGGAGCT+TGG 0.612835 8:+83801712 MsG0880047251.01.T01:three_prime_UTR
CCCGCGTCACCGGTCTCCGG+TGG 0.617971 8:+83799188 MsG0880047251.01.T01:CDS
CCCTCAACCTATCCTTAAAG+GGG 0.621541 8:+83802309 MsG0880047251.01.T01:three_prime_UTR
TCTGCTGCTGATACCTTGGA+AGG 0.625070 8:-83800718 None:intergenic
AGAATCTGATCCCATACTTG+CGG 0.627614 8:+83800943 MsG0880047251.01.T01:CDS
CTGAAGATCAGCGAGAAGCA+TGG 0.633168 8:-83799431 None:intergenic
TGATTTGACTGAGAGGATGA+AGG 0.637086 8:+83799288 MsG0880047251.01.T01:CDS
CTTTCAATGATTTGACTGAG+AGG 0.637305 8:+83799281 MsG0880047251.01.T01:CDS
TCTGAAATTCATCAGAGCTG+AGG 0.641418 8:-83801795 None:intergenic
AAGATGGTGATAGAACTTGT+CGG 0.650862 8:+83799256 MsG0880047251.01.T01:CDS
ATCTGCTGGAATATTGAGAG+AGG 0.655258 8:+83800466 MsG0880047251.01.T01:CDS
GAGATGGAAGATAAGCATTG+AGG 0.656217 8:+83801684 MsG0880047251.01.T01:three_prime_UTR
GGCTGGTCTTACTAATCCAG+AGG 0.657487 8:+83801355 MsG0880047251.01.T01:three_prime_UTR
TGATGTGCTTGGACTGCGAG+TGG 0.660485 8:+83801061 MsG0880047251.01.T01:three_prime_UTR
TGGTCTTACTAATCCAGAGG+AGG 0.668643 8:+83801358 MsG0880047251.01.T01:three_prime_UTR
GCGTGGGGTAATCGGAAGCG+TGG 0.673355 8:-83799090 None:intergenic
TGATTTGAAAAGAAGACCAG+AGG 0.678594 8:-83799326 None:intergenic
TGGATGTAAGTGAAATTGGG+AGG 0.681330 8:+83801246 MsG0880047251.01.T01:three_prime_UTR
TTTGTTTGAGAAGAGAATGG+TGG 0.686445 8:-83799114 None:intergenic
AAGCATTGAGGAACTTACAG+AGG 0.688318 8:+83801696 MsG0880047251.01.T01:three_prime_UTR
GAAATGGATAGGTTAGCTGT+TGG 0.706251 8:+83801305 MsG0880047251.01.T01:three_prime_UTR
TTGAGAAGTCAGGAGACAGG+TGG 0.721078 8:+83800875 MsG0880047251.01.T01:CDS
CCTCAACCTATCCTTAAAGG+GGG 0.725183 8:+83802310 MsG0880047251.01.T01:three_prime_UTR
TGTGCTGTAGAAGTTCCCGG+TGG 0.767826 8:+83799229 MsG0880047251.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGTTAGATAATAGATA+TGG + Chr8:83800015-83800034 MsG0880047251.01.T01:intron 15.0%
!! TACTATAAAGAAACAATAAA+CGG - Chr8:83800416-83800435 None:intergenic 15.0%
!! TTGAATTATAAGATAATAAC+AGG - Chr8:83802450-83802469 None:intergenic 15.0%
!! TTTAATTCAGGTATATAATA+AGG + Chr8:83802144-83802163 MsG0880047251.01.T01:three_prime_UTR 15.0%
!!! ATAAGAAAAGATTCTTTTTT+AGG + Chr8:83799663-83799682 MsG0880047251.01.T01:intron 15.0%
!!! GCAATTGATTTTAAATAATT+TGG - Chr8:83800201-83800220 None:intergenic 15.0%
!!! TAAAAAAAGATTCCTTTTTT+AGG + Chr8:83799700-83799719 MsG0880047251.01.T01:intron 15.0%
!!! TATTTTTTTATATTTGAGAC+CGG + Chr8:83799799-83799818 MsG0880047251.01.T01:intron 15.0%
!!! TCTATTTGTTTTATTAGTTA+AGG - Chr8:83799972-83799991 None:intergenic 15.0%
!! AAAATATTCCTCTTTACAAA+CGG - Chr8:83802359-83802378 None:intergenic 20.0%
!! AAGTCAATAAATAGTAATCA+TGG - Chr8:83799608-83799627 None:intergenic 20.0%
!! AATATTGTGGTATACATATA+AGG + Chr8:83799826-83799845 MsG0880047251.01.T01:intron 20.0%
!! AGTTGTACATAATTTCTTAA+TGG + Chr8:83801919-83801938 MsG0880047251.01.T01:intron 20.0%
!! ATGAAAATGAATGAAAGTAA+TGG - Chr8:83799464-83799483 None:intergenic 20.0%
!! TGATGAATACAAGAAAATAT+TGG + Chr8:83802091-83802110 MsG0880047251.01.T01:three_prime_UTR 20.0%
!! TTATTCAATGAACCTAAAAA+AGG - Chr8:83799715-83799734 None:intergenic 20.0%
!!! ATAATTGATTTTGACATGTT+TGG + Chr8:83800099-83800118 MsG0880047251.01.T01:intron 20.0%
!!! TCTTTTCTTATATTTCAGAA+CGG - Chr8:83799654-83799673 None:intergenic 20.0%
!!! TGTTTTATTTTTTGATACTC+AGG + Chr8:83801527-83801546 MsG0880047251.01.T01:intron 20.0%
! AACAAATAGATAAGCTTAGA+AGG + Chr8:83799982-83800001 MsG0880047251.01.T01:intron 25.0%
! CAAGTTAGAATCAATTATAG+AGG - Chr8:83800150-83800169 None:intergenic 25.0%
! TAACTACATATCACTTGAAT+TGG + Chr8:83800796-83800815 MsG0880047251.01.T01:CDS 25.0%
! TCCACATAAAGATATGAATA+AGG - Chr8:83800848-83800867 None:intergenic 25.0%
! TCCTTATTCATATCTTTATG+TGG + Chr8:83800844-83800863 MsG0880047251.01.T01:CDS 25.0%
! TGAATGTAATGTAATGTTGT+TGG - Chr8:83799025-83799044 None:intergenic 25.0%
!! AATTTCAGTAAGAGTTTGTT+TGG - Chr8:83800358-83800377 None:intergenic 25.0%
AAACACAACACCAATATTTG+TGG - Chr8:83798991-83799010 None:intergenic 30.0%
AACAGCTACTATACTCTTAA+TGG - Chr8:83800256-83800275 None:intergenic 30.0%
ACAGATAAGAACTACTGAAA+TGG + Chr8:83801289-83801308 MsG0880047251.01.T01:three_prime_UTR 30.0%
AGGCAAATCTTATACACAAT+TGG - Chr8:83802243-83802262 None:intergenic 30.0%
AGTATCCTATAAGATATTCG+TGG - Chr8:83802267-83802286 None:intergenic 30.0%
ATAATTTGGTTATGTGTCTC+TGG - Chr8:83800187-83800206 None:intergenic 30.0%
ATAGTAAATGTGATTGCAGA+TGG + Chr8:83800430-83800449 MsG0880047251.01.T01:intron 30.0%
ATATAATCTTTAGTCCGAGA+AGG - Chr8:83801182-83801201 None:intergenic 30.0%
ATCAAATCATCCAATCTATG+TGG + Chr8:83801147-83801166 MsG0880047251.01.T01:three_prime_UTR 30.0%
ATTTCAGATGTTCCAAAAAC+AGG + Chr8:83801810-83801829 MsG0880047251.01.T01:three_prime_UTR 30.0%
CAACAACCAATTATATGTGT+GGG + Chr8:83799545-83799564 MsG0880047251.01.T01:intron 30.0%
CAATGAAATTATGACACTCA+AGG - Chr8:83800393-83800412 None:intergenic 30.0%
CAGGTATATAATAAGGAGTT+TGG + Chr8:83802151-83802170 MsG0880047251.01.T01:three_prime_UTR 30.0%
CATATCTTTATGTGGATACA+TGG + Chr8:83800852-83800871 MsG0880047251.01.T01:CDS 30.0%
CATTGAGTAGTTAATGTATG+TGG - Chr8:83799764-83799783 None:intergenic 30.0%
CTCACTTAGATAATCTATTG+TGG + Chr8:83802285-83802304 MsG0880047251.01.T01:three_prime_UTR 30.0%
CTTATCTGTATTTCCATCAA+GGG - Chr8:83801278-83801297 None:intergenic 30.0%
CTTGCAAAGATGAATGAATA+CGG - Chr8:83801406-83801425 None:intergenic 30.0%
GACATGAAAAAGAAGGAAAT+TGG + Chr8:83801497-83801516 MsG0880047251.01.T01:intron 30.0%
TAAGAACTACTGAAATGGAT+AGG + Chr8:83801294-83801313 MsG0880047251.01.T01:three_prime_UTR 30.0%
TAGCTCAAGTATATATGCTT+TGG - Chr8:83801961-83801980 None:intergenic 30.0%
TATAATCTTTAGTCCGAGAA+GGG - Chr8:83801181-83801200 None:intergenic 30.0%
TATGTAACTCTAGTGGTATT+TGG + Chr8:83802028-83802047 MsG0880047251.01.T01:intron 30.0%
TATTGGATGAGAACTTCATA+TGG + Chr8:83802108-83802127 MsG0880047251.01.T01:three_prime_UTR 30.0%
TCTTATCTGTATTTCCATCA+AGG - Chr8:83801279-83801298 None:intergenic 30.0%
TGGATACAAAAGTTTGCATA+TGG + Chr8:83801220-83801239 MsG0880047251.01.T01:three_prime_UTR 30.0%
TTCCAAGTGCAAATCATAAA+GGG + Chr8:83801612-83801631 MsG0880047251.01.T01:three_prime_UTR 30.0%
TTCTTATATTTCAGAACGGA+GGG - Chr8:83799650-83799669 None:intergenic 30.0%
TTGCAGTTAACAAAACACAT+AGG + Chr8:83800217-83800236 MsG0880047251.01.T01:intron 30.0%
TTTCCAAGTGCAAATCATAA+AGG + Chr8:83801611-83801630 MsG0880047251.01.T01:three_prime_UTR 30.0%
TTTCTTATATTTCAGAACGG+AGG - Chr8:83799651-83799670 None:intergenic 30.0%
TTTGCACTTGGAAAATCTTT+AGG - Chr8:83801605-83801624 None:intergenic 30.0%
! AAGTGTAAGAGTTCCATTTT+TGG - Chr8:83799070-83799089 None:intergenic 30.0%
! TTTTTCATGTCTAAGGAGTT+AGG - Chr8:83801488-83801507 None:intergenic 30.0%
!! AATTTGACATTTTGAGAGCA+AGG + Chr8:83799867-83799886 MsG0880047251.01.T01:intron 30.0%
!! AGATGATAGTGGTTTAATTC+AGG + Chr8:83802132-83802151 MsG0880047251.01.T01:three_prime_UTR 30.0%
!! AGTGTTGTTTAGTCTCAATT+TGG + Chr8:83799895-83799914 MsG0880047251.01.T01:intron 30.0%
!! TGACATTAGAGCTTTGATTT+TGG + Chr8:83800655-83800674 MsG0880047251.01.T01:CDS 30.0%
!! TTCCTTCTTTTTCATGTCTA+AGG - Chr8:83801495-83801514 None:intergenic 30.0%
!! TTTTTATATTTGAGACCGGA+GGG + Chr8:83799803-83799822 MsG0880047251.01.T01:intron 30.0%
!!! TTTTTTATATTTGAGACCGG+AGG + Chr8:83799802-83799821 MsG0880047251.01.T01:intron 30.0%
AAGATGGTGATAGAACTTGT+CGG + Chr8:83799256-83799275 MsG0880047251.01.T01:CDS 35.0%
AATGCATTATCTCCAGACTT+AGG - Chr8:83801095-83801114 None:intergenic 35.0%
ACTACGCATTGAACCAAAAA+TGG + Chr8:83799054-83799073 MsG0880047251.01.T01:exon 35.0%
AGCACATCATTTACATCTTC+TGG - Chr8:83801050-83801069 None:intergenic 35.0%
AGGTGATTTGATGTCTTATC+AGG + Chr8:83801830-83801849 MsG0880047251.01.T01:intron 35.0%
ATAATAAGGAGTTTGGCAAC+AGG + Chr8:83802158-83802177 MsG0880047251.01.T01:three_prime_UTR 35.0%
ATGCATTATCTCCAGACTTA+GGG - Chr8:83801094-83801113 None:intergenic 35.0%
ATTATATTGCCAGGCCAAAA+GGG + Chr8:83801195-83801214 MsG0880047251.01.T01:three_prime_UTR 35.0%
CAAAGTCCCACACATATAAT+TGG - Chr8:83799554-83799573 None:intergenic 35.0%
CAATTATATGTGTGGGACTT+TGG + Chr8:83799552-83799571 MsG0880047251.01.T01:intron 35.0%
CAGTGGATGTAAGTGAAATT+GGG + Chr8:83801243-83801262 MsG0880047251.01.T01:three_prime_UTR 35.0%
CTCCTTAGACATGAAAAAGA+AGG + Chr8:83801490-83801509 MsG0880047251.01.T01:intron 35.0%
CTTTCAATGATTTGACTGAG+AGG + Chr8:83799281-83799300 MsG0880047251.01.T01:CDS 35.0%
GAAGATGTAAATGATGTGCT+TGG + Chr8:83801050-83801069 MsG0880047251.01.T01:three_prime_UTR 35.0%
GCAACAACCAATTATATGTG+TGG + Chr8:83799544-83799563 MsG0880047251.01.T01:intron 35.0%
GGACTAAAGATTATATTGCC+AGG + Chr8:83801186-83801205 MsG0880047251.01.T01:three_prime_UTR 35.0%
GGATTTCTTTCCACATAGAT+TGG - Chr8:83801160-83801179 None:intergenic 35.0%
GGCATCTCATTCATTATACA+AGG + Chr8:83801334-83801353 MsG0880047251.01.T01:three_prime_UTR 35.0%
TAAGTCTGGAGATAATGCAT+TGG + Chr8:83801094-83801113 MsG0880047251.01.T01:three_prime_UTR 35.0%
TCCTATAAGATATTCGTGGA+AGG - Chr8:83802263-83802282 None:intergenic 35.0%
TCTCATTCATTATACAAGGC+TGG + Chr8:83801338-83801357 MsG0880047251.01.T01:three_prime_UTR 35.0%
TGAGTTGTATGTAACTCTAG+TGG + Chr8:83802021-83802040 MsG0880047251.01.T01:intron 35.0%
TGATTTGAAAAGAAGACCAG+AGG - Chr8:83799329-83799348 None:intergenic 35.0%
TTACATACAACTCATGAGAC+AGG - Chr8:83802015-83802034 None:intergenic 35.0%
TTTCACCAAACACACATGTA+AGG - Chr8:83800066-83800085 None:intergenic 35.0%
TTTGTTTGAGAAGAGAATGG+TGG - Chr8:83799117-83799136 None:intergenic 35.0%
! ATCCCTTTATGATTTGCACT+TGG - Chr8:83801617-83801636 None:intergenic 35.0%
! CTTTTGTATCCATTCCCTTT+TGG - Chr8:83801212-83801231 None:intergenic 35.0%
! GACATCAAATCACCTGTTTT+TGG - Chr8:83801825-83801844 None:intergenic 35.0%
! TAGTGGATGATCTCAGTTAA+AGG + Chr8:83800969-83800988 MsG0880047251.01.T01:CDS 35.0%
! TGCTTTGGTAATCAGATAGT+TGG - Chr8:83801946-83801965 None:intergenic 35.0%
!! ATGGATAAAGCTTTGGAAAG+AGG - Chr8:83799409-83799428 None:intergenic 35.0%
!! TAAGCTTAGAAGGTTGATGA+TGG + Chr8:83799992-83800011 MsG0880047251.01.T01:intron 35.0%
!! TAGAGCTTTGATTTTGGACT+TGG + Chr8:83800661-83800680 MsG0880047251.01.T01:CDS 35.0%
!! TGGTTTGTTTGAGAAGAGAA+TGG - Chr8:83799120-83799139 None:intergenic 35.0%
!! TGTGTGTTTGGTGAAACTTT+TGG + Chr8:83800070-83800089 MsG0880047251.01.T01:intron 35.0%
!!! CTAGTGGTATTTGGTTTTGT+AGG + Chr8:83802037-83802056 MsG0880047251.01.T01:intron 35.0%
AAGAAAACACTAACCTCCTC+TGG - Chr8:83801374-83801393 None:intergenic 40.0%
ACCCTCAACCTATCCTTAAA+GGG + Chr8:83802308-83802327 MsG0880047251.01.T01:three_prime_UTR 40.0%
AGAATCTGATCCCATACTTG+CGG + Chr8:83800943-83800962 MsG0880047251.01.T01:CDS 40.0%
ATCCACTAATTCCGCAAGTA+TGG - Chr8:83800957-83800976 None:intergenic 40.0%
ATCTGCTGGAATATTGAGAG+AGG + Chr8:83800466-83800485 MsG0880047251.01.T01:CDS 40.0%
ATGAAGAAGCTCTTGAAGGA+TGG + Chr8:83801017-83801036 MsG0880047251.01.T01:three_prime_UTR 40.0%
CAAAAGTTTGCATATGGCAG+TGG + Chr8:83801226-83801245 MsG0880047251.01.T01:three_prime_UTR 40.0%
CACAATGAAGAAGCTCTTGA+AGG + Chr8:83801013-83801032 MsG0880047251.01.T01:three_prime_UTR 40.0%
CATGAAGTTCGAAGTCAGAT+AGG + Chr8:83800515-83800534 MsG0880047251.01.T01:CDS 40.0%
CATGGCAATGGATAAAGCTT+TGG - Chr8:83799416-83799435 None:intergenic 40.0%
CGAGATGGTTCGTAATTTAG+AGG + Chr8:83802061-83802080 MsG0880047251.01.T01:three_prime_UTR 40.0%
CTGAAATTCATCAGAGCTGA+GGG - Chr8:83801797-83801816 None:intergenic 40.0%
CTTCATATGGCAGATGATAG+TGG + Chr8:83802121-83802140 MsG0880047251.01.T01:three_prime_UTR 40.0%
GATGCAGAAGTTATATCTGC+TGG + Chr8:83800452-83800471 MsG0880047251.01.T01:CDS 40.0%
GATTATATTGCCAGGCCAAA+AGG + Chr8:83801194-83801213 MsG0880047251.01.T01:three_prime_UTR 40.0%
GCAGTGGATGTAAGTGAAAT+TGG + Chr8:83801242-83801261 MsG0880047251.01.T01:three_prime_UTR 40.0%
GCCTTCCACGAATATCTTAT+AGG + Chr8:83802259-83802278 MsG0880047251.01.T01:three_prime_UTR 40.0%
GTATACCACAATATTCCCTC+CGG - Chr8:83799821-83799840 None:intergenic 40.0%
GTTGACCTTACATGTGTGTT+TGG + Chr8:83800058-83800077 MsG0880047251.01.T01:intron 40.0%
TCCACTAATTCCGCAAGTAT+GGG - Chr8:83800956-83800975 None:intergenic 40.0%
TCTAAGGAGTTAGGTCTAGA+TGG - Chr8:83801479-83801498 None:intergenic 40.0%
TGATTTGACTGAGAGGATGA+AGG + Chr8:83799288-83799307 MsG0880047251.01.T01:CDS 40.0%
TGGATGTAAGTGAAATTGGG+AGG + Chr8:83801246-83801265 MsG0880047251.01.T01:three_prime_UTR 40.0%
TGTGGAAAGAAATCCCTTCT+CGG + Chr8:83801165-83801184 MsG0880047251.01.T01:three_prime_UTR 40.0%
TTCCTCTTTACAAACGGTTC+TGG - Chr8:83802353-83802372 None:intergenic 40.0%
! GAAATGGATAGGTTAGCTGT+TGG + Chr8:83801305-83801324 MsG0880047251.01.T01:three_prime_UTR 40.0%
! GACTATTTTCACCCCCTTTA+AGG - Chr8:83802324-83802343 None:intergenic 40.0%
! GAGATGGAAGATAAGCATTG+AGG + Chr8:83801684-83801703 MsG0880047251.01.T01:three_prime_UTR 40.0%
! TCTGAAATTCATCAGAGCTG+AGG - Chr8:83801798-83801817 None:intergenic 40.0%
! TGCATCTAGAGTAGACATTC+TGG + Chr8:83800586-83800605 MsG0880047251.01.T01:CDS 40.0%
! TGGAATATTGAGAGAGGTGT+TGG + Chr8:83800472-83800491 MsG0880047251.01.T01:CDS 40.0%
!! AAGCATTGAGGAACTTACAG+AGG + Chr8:83801696-83801715 MsG0880047251.01.T01:three_prime_UTR 40.0%
!! AGAGCTTTGAAGAACAGGAA+TGG - Chr8:83799362-83799381 None:intergenic 40.0%
!! CTTTGAAGCTTGACATGATG+AGG + Chr8:83800684-83800703 MsG0880047251.01.T01:CDS 40.0%
!! GTGTTTGGTGAAACTTTTGG+AGG + Chr8:83800073-83800092 MsG0880047251.01.T01:intron 40.0%
!! TGACATTTTGAGAGCAAGGA+AGG + Chr8:83799871-83799890 MsG0880047251.01.T01:intron 40.0%
!! TTTTCACCCCCTTTAAGGAT+AGG - Chr8:83802319-83802338 None:intergenic 40.0%
!!! TTTGGTTTTGTAGGTCGAGA+TGG + Chr8:83802046-83802065 MsG0880047251.01.T01:intron 40.0%
AAGAAGACCAGAGGAACTTG+TGG - Chr8:83799320-83799339 None:intergenic 45.0%
AGAAGCTCTTGAAGGATGGT+CGG + Chr8:83801021-83801040 MsG0880047251.01.T01:three_prime_UTR 45.0%
AGCCAGAACCGTTTGTAAAG+AGG + Chr8:83802348-83802367 MsG0880047251.01.T01:three_prime_UTR 45.0%
AGGTTCTGCTACTGCTCATT+TGG + Chr8:83800535-83800554 MsG0880047251.01.T01:CDS 45.0%
ATGATCTGCTGCTGATACCT+TGG - Chr8:83800725-83800744 None:intergenic 45.0%
ATGTCATGTGCATCTTCTCC+TGG - Chr8:83801742-83801761 None:intergenic 45.0%
CCCTCAACCTATCCTTAAAG+GGG + Chr8:83802309-83802328 MsG0880047251.01.T01:three_prime_UTR 45.0%
CCTCAACCTATCCTTAAAGG+GGG + Chr8:83802310-83802329 MsG0880047251.01.T01:three_prime_UTR 45.0%
GACCCTCAACCTATCCTTAA+AGG + Chr8:83802307-83802326 MsG0880047251.01.T01:three_prime_UTR 45.0%
GCGTTTAAAGACCATCATGC+TGG + Chr8:83801554-83801573 MsG0880047251.01.T01:three_prime_UTR 45.0%
GGAACTTACAGAGGTGATAG+AGG + Chr8:83801705-83801724 MsG0880047251.01.T01:three_prime_UTR 45.0%
GGAAGAAGAGTGAGAGTAAG+CGG - Chr8:83799156-83799175 None:intergenic 45.0%
GGAGATAATGCATTGGAAGC+TGG + Chr8:83801101-83801120 MsG0880047251.01.T01:three_prime_UTR 45.0%
GGATACATGGTTGAGAAGTC+AGG + Chr8:83800865-83800884 MsG0880047251.01.T01:CDS 45.0%
GTGTTATCCACAAGTTCCTC+TGG + Chr8:83799310-83799329 MsG0880047251.01.T01:CDS 45.0%
TATCACCATCTTTCCTCCAC+CGG - Chr8:83799248-83799267 None:intergenic 45.0%
TCCCATACTTGCGGAATTAG+TGG + Chr8:83800952-83800971 MsG0880047251.01.T01:CDS 45.0%
TTTCGCCTTCTCGACAAGAA+CGG + Chr8:83801662-83801681 MsG0880047251.01.T01:three_prime_UTR 45.0%
! ATGGATAGGTTAGCTGTTGG+TGG + Chr8:83801308-83801327 MsG0880047251.01.T01:three_prime_UTR 45.0%
! CCCCTTTAAGGATAGGTTGA+GGG - Chr8:83802312-83802331 None:intergenic 45.0%
! CTTCTTGACTCGAACAGTGA+TGG + Chr8:83801769-83801788 MsG0880047251.01.T01:three_prime_UTR 45.0%
! CTTGACATGATGAGGCATCT+TGG + Chr8:83800692-83800711 MsG0880047251.01.T01:CDS 45.0%
! TAGGTTAGCTGTTGGTGGAA+TGG + Chr8:83801313-83801332 MsG0880047251.01.T01:three_prime_UTR 45.0%
! TGGTCTTACTAATCCAGAGG+AGG + Chr8:83801358-83801377 MsG0880047251.01.T01:three_prime_UTR 45.0%
!! AGAGGAGAGCTTTGAAGAAC+AGG - Chr8:83799367-83799386 None:intergenic 45.0%
!! TTGAGAGAGGTGTTGGAAGT+AGG + Chr8:83800479-83800498 MsG0880047251.01.T01:CDS 45.0%
ACAGAGGTGATAGAGGAGCT+TGG + Chr8:83801712-83801731 MsG0880047251.01.T01:three_prime_UTR 50.0%
ACTTCTACAGCACACGCTCT+TGG - Chr8:83799223-83799242 None:intergenic 50.0%
AGCTCTCCTCTTACTCCTGA+TGG + Chr8:83799376-83799395 MsG0880047251.01.T01:CDS 50.0%
ATCACCATCTTTCCTCCACC+GGG - Chr8:83799247-83799266 None:intergenic 50.0%
ATTCCCACAGCATGAGCAAG+AGG - Chr8:83800776-83800795 None:intergenic 50.0%
ATTGCCAGGCCAAAAGGGAA+TGG + Chr8:83801200-83801219 MsG0880047251.01.T01:three_prime_UTR 50.0%
CATCTCCGTTCTTGTCGAGA+AGG - Chr8:83801670-83801689 None:intergenic 50.0%
CATGCTTCTCGCTGATCTTC+AGG + Chr8:83799432-83799451 MsG0880047251.01.T01:CDS 50.0%
CTGAAGATCAGCGAGAAGCA+TGG - Chr8:83799434-83799453 None:intergenic 50.0%
CTTCTCGACAAGAACGGAGA+TGG + Chr8:83801668-83801687 MsG0880047251.01.T01:three_prime_UTR 50.0%
GAAAGAGGAGAACGACCATC+AGG - Chr8:83799394-83799413 None:intergenic 50.0%
GAACGACCATCAGGAGTAAG+AGG - Chr8:83799385-83799404 None:intergenic 50.0%
TAAGCGGTGATGAGTGGTAG+TGG - Chr8:83799140-83799159 None:intergenic 50.0%
TCTGCTGCTGATACCTTGGA+AGG - Chr8:83800721-83800740 None:intergenic 50.0%
TGAGACCGGAGGGAATATTG+TGG + Chr8:83799813-83799832 MsG0880047251.01.T01:intron 50.0%
TGAGAGTAAGCGGTGATGAG+TGG - Chr8:83799146-83799165 None:intergenic 50.0%
TGGTTGAGAAGTCAGGAGAC+AGG + Chr8:83800872-83800891 MsG0880047251.01.T01:CDS 50.0%
TTGAGAAGTCAGGAGACAGG+TGG + Chr8:83800875-83800894 MsG0880047251.01.T01:CDS 50.0%
! ATCAGCGAGAAGCATGGCAA+TGG - Chr8:83799428-83799447 None:intergenic 50.0%
! CCCCCTTTAAGGATAGGTTG+AGG - Chr8:83802313-83802332 None:intergenic 50.0%
! GTATCCATTCCCTTTTGGCC+TGG - Chr8:83801207-83801226 None:intergenic 50.0%
! GTGGTGTTGAACCCTAAGTC+TGG + Chr8:83801080-83801099 MsG0880047251.01.T01:three_prime_UTR 50.0%
!! GGCTGGTCTTACTAATCCAG+AGG + Chr8:83801355-83801374 MsG0880047251.01.T01:three_prime_UTR 50.0%
AGCACACGCTCTTGGAGTAC+TGG - Chr8:83799215-83799234 None:intergenic 55.0%
AGTTCCCGGTGGAGGAAAGA+TGG + Chr8:83799240-83799259 MsG0880047251.01.T01:CDS 55.0%
GCGTGTGCTGTAGAAGTTCC+CGG + Chr8:83799226-83799245 MsG0880047251.01.T01:CDS 55.0%
GCTCCTCTTGCTCATGCTGT+GGG + Chr8:83800770-83800789 MsG0880047251.01.T01:CDS 55.0%
GGCATCTTGGTCACCTTCCA+AGG + Chr8:83800705-83800724 MsG0880047251.01.T01:CDS 55.0%
TGATGTGCTTGGACTGCGAG+TGG + Chr8:83801061-83801080 MsG0880047251.01.T01:three_prime_UTR 55.0%
TGCTCCTCTTGCTCATGCTG+TGG + Chr8:83800769-83800788 MsG0880047251.01.T01:CDS 55.0%
TGGGAGGACTAGACCCTTGA+TGG + Chr8:83801262-83801281 MsG0880047251.01.T01:three_prime_UTR 55.0%
TGTGCTGTAGAAGTTCCCGG+TGG + Chr8:83799229-83799248 MsG0880047251.01.T01:CDS 55.0%
TTCAGCTGCAGCCAGCATGA+TGG - Chr8:83801568-83801587 None:intergenic 55.0%
! AGAAGAGAATGGTGGCGCGT+GGG - Chr8:83799109-83799128 None:intergenic 55.0%
! TGGAGAGAGAGCGTGCTACA+GGG + Chr8:83801121-83801140 MsG0880047251.01.T01:three_prime_UTR 55.0%
!! ATAGAGGAGCTTGGTGCACC+AGG + Chr8:83801721-83801740 MsG0880047251.01.T01:three_prime_UTR 55.0%
!! CTCTTGGAGTACTGGACCAC+CGG - Chr8:83799207-83799226 None:intergenic 55.0%
GCTGTAGAAGTTCCCGGTGG+AGG + Chr8:83799232-83799251 MsG0880047251.01.T01:CDS 60.0%
! AGTACTGGACCACCGGAGAC+CGG - Chr8:83799200-83799219 None:intergenic 60.0%
! ATGGTGGCGCGTGGGGTAAT+CGG - Chr8:83799101-83799120 None:intergenic 60.0%
! CATGCTGGCTGCAGCTGAAC+TGG + Chr8:83801569-83801588 MsG0880047251.01.T01:three_prime_UTR 60.0%
! CTGGAGAGAGAGCGTGCTAC+AGG + Chr8:83801120-83801139 MsG0880047251.01.T01:three_prime_UTR 60.0%
! GAAGAGAATGGTGGCGCGTG+GGG - Chr8:83799108-83799127 None:intergenic 60.0%
! GAGAAGAGAATGGTGGCGCG+TGG - Chr8:83799110-83799129 None:intergenic 60.0%
GCGTGGGGTAATCGGAAGCG+TGG - Chr8:83799093-83799112 None:intergenic 65.0%
ACCACCGGAGACCGGTGACG+CGG - Chr8:83799192-83799211 None:intergenic 70.0%
ACTCGACCCACCCGCGTCAC+CGG + Chr8:83799178-83799197 MsG0880047251.01.T01:CDS 70.0%
GTGACGCGGGTGGGTCGAGT+GGG - Chr8:83799178-83799197 None:intergenic 70.0%
TGACGCGGGTGGGTCGAGTG+GGG - Chr8:83799177-83799196 None:intergenic 70.0%
CCACCCGCGTCACCGGTCTC+CGG + Chr8:83799185-83799204 MsG0880047251.01.T01:CDS 75.0%
CCACCGGAGACCGGTGACGC+GGG - Chr8:83799191-83799210 None:intergenic 75.0%
CGGAGACCGGTGACGCGGGT+GGG - Chr8:83799187-83799206 None:intergenic 75.0%
GGTGACGCGGGTGGGTCGAG+TGG - Chr8:83799179-83799198 None:intergenic 75.0%
! CCCGCGTCACCGGTCTCCGG+TGG + Chr8:83799188-83799207 MsG0880047251.01.T01:CDS 80.0%
! CCGGAGACCGGTGACGCGGG+TGG - Chr8:83799188-83799207 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 83798986 83802486 83798986 ID=MsG0880047251.01;Name=MsG0880047251.01
Chr8 mRNA 83798986 83802486 83798986 ID=MsG0880047251.01.T01;Parent=MsG0880047251.01;Name=MsG0880047251.01.T01;_AED=0.25;_eAED=0.25;_QI=87|1|1|1|0.66|0.25|4|1102|306
Chr8 exon 83798986 83799453 83798986 ID=MsG0880047251.01.T01:exon:35663;Parent=MsG0880047251.01.T01
Chr8 exon 83800449 83801379 83800449 ID=MsG0880047251.01.T01:exon:35664;Parent=MsG0880047251.01.T01
Chr8 exon 83801549 83801831 83801549 ID=MsG0880047251.01.T01:exon:35665;Parent=MsG0880047251.01.T01
Chr8 exon 83802059 83802486 83802059 ID=MsG0880047251.01.T01:exon:35666;Parent=MsG0880047251.01.T01
Chr8 five_prime_UTR 83798986 83799072 83798986 ID=MsG0880047251.01.T01:five_prime_utr;Parent=MsG0880047251.01.T01
Chr8 CDS 83799073 83799453 83799073 ID=MsG0880047251.01.T01:cds;Parent=MsG0880047251.01.T01
Chr8 CDS 83800449 83800988 83800449 ID=MsG0880047251.01.T01:cds;Parent=MsG0880047251.01.T01
Chr8 three_prime_UTR 83800989 83801379 83800989 ID=MsG0880047251.01.T01:three_prime_utr;Parent=MsG0880047251.01.T01
Chr8 three_prime_UTR 83801549 83801831 83801549 ID=MsG0880047251.01.T01:three_prime_utr;Parent=MsG0880047251.01.T01
Chr8 three_prime_UTR 83802059 83802486 83802059 ID=MsG0880047251.01.T01:three_prime_utr;Parent=MsG0880047251.01.T01
Gene Sequence

>MsG0880047251.01.T01

ATGGAACTCTTACACTTCCACGCTTCCGATTACCCCACGCGCCACCATTCTCTTCTCAAACAAACCACTACCACTCATCACCGCTTACTCTCACTCTTCTTCCCCACTCGACCCACCCGCGTCACCGGTCTCCGGTGGTCCAGTACTCCAAGAGCGTGTGCTGTAGAAGTTCCCGGTGGAGGAAAGATGGTGATAGAACTTGTCGGTGCTTTCAATGATTTGACTGAGAGGATGAAGGTGTTATCCACAAGTTCCTCTGGTCTTCTTTTCAAATCATTGAAACTCTCCATTCCTGTTCTTCAAAGCTCTCCTCTTACTCCTGATGGTCGTTCTCCTCTTTCCAAAGCTTTATCCATTGCCATGCTTCTCGCTGATCTTCAGATGGATGCAGAAGTTATATCTGCTGGAATATTGAGAGAGGTGTTGGAAGTAGGTGAGTTAAATCTACATGAAGTTCGAAGTCAGATAGGTTCTGCTACTGCTCATTTGGTGCACGAGAGTTTGCGTGTTAAGAACTTTGCATCTAGAGTAGACATTCTGGATGAAGAGAATGCTGCTGCTTTGAGAAAGTTCTGTCTCACTTACTATGACATTAGAGCTTTGATTTTGGACTTGGCTTTGAAGCTTGACATGATGAGGCATCTTGGTCACCTTCCAAGGTATCAGCAGCAGATCATTTCTCTGCAAGTTATGAAAATATATGCTCCTCTTGCTCATGCTGTGGGAATTAACTACATATCACTTGAATTGGAAGATCTCTCGTTTCAGTATTTGTTTCCTTATTCATATCTTTATGTGGATACATGGTTGAGAAGTCAGGAGACAGGTGGTATATCTCTTATCGATGTATACAAAGATGAATTGCTTCAGTCACTAGAATCTGATCCCATACTTGCGGAATTAGTGGATGATCTCAGTTAA

Protein sequence

>MsG0880047251.01.T01

MELLHFHASDYPTRHHSLLKQTTTTHHRLLSLFFPTRPTRVTGLRWSSTPRACAVEVPGGGKMVIELVGAFNDLTERMKVLSTSSSGLLFKSLKLSIPVLQSSPLTPDGRSPLSKALSIAMLLADLQMDAEVISAGILREVLEVGELNLHEVRSQIGSATAHLVHESLRVKNFASRVDILDEENAAALRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAPLAHAVGINYISLELEDLSFQYLFPYSYLYVDTWLRSQETGGISLIDVYKDELLQSLESDPILAELVDDLS*