Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021931.01.T01 | RHN61806.1 | 96.196 | 368 | 11 | 1 | 2 | 366 | 2 | 369 | 0 | 727 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021931.01.T01 | B0ZB57 | 57.778 | 360 | 139 | 4 | 19 | 366 | 19 | 377 | 2.77E-147 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021931.01.T01 | A0A396I869 | 96.196 | 368 | 11 | 1 | 2 | 366 | 2 | 369 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004510.01 | MsG0480021931.01 | 0.844068 | 9.506025e-59 | 1.517048e-55 |
| MsG0180005623.01 | MsG0480021931.01 | 0.800793 | 1.219888e-48 | 5.731358e-46 |
| MsG0180006026.01 | MsG0480021931.01 | 0.843831 | 1.100024e-58 | 1.742467e-55 |
| MsG0180006182.01 | MsG0480021931.01 | 0.811906 | 5.538438e-51 | 3.470924e-48 |
| MsG0180006191.01 | MsG0480021931.01 | 0.804227 | 2.390459e-49 | 1.225806e-46 |
| MsG0380013041.01 | MsG0480021931.01 | 0.822851 | 1.898447e-53 | 1.607836e-50 |
| MsG0480021931.01 | MsG0580025822.01 | 0.810371 | 1.191528e-50 | 7.169596e-48 |
| MsG0480021931.01 | MsG0780037232.01 | 0.836725 | 7.907227e-57 | 1.005123e-53 |
| MsG0480021931.01 | MsG0780040021.01 | 0.811682 | 6.195677e-51 | 3.859687e-48 |
| MsG0480021931.01 | MsG0780040139.01 | 0.803791 | 2.945105e-49 | 1.493499e-46 |
| MsG0480021931.01 | MsG0780040564.01 | 0.800122 | 1.671233e-48 | 7.719581e-46 |
| MsG0480021931.01 | MsG0780041363.01 | 0.841330 | 5.074732e-58 | 7.430785e-55 |
| MsG0480021931.01 | MsG0880042930.01 | 0.802333 | 5.896150e-49 | 2.880622e-46 |
| MsG0480021931.01 | MsG0880043961.01 | 0.816434 | 5.540838e-52 | 3.925576e-49 |
| MsG0480021931.01 | MsG0880043983.01 | 0.801342 | 9.419918e-49 | 4.487799e-46 |
| MsG0480021931.01 | MsG0880043989.01 | 0.825171 | 5.422476e-54 | 4.905340e-51 |
| MsG0280009241.01 | MsG0480021931.01 | 0.826128 | 3.215148e-54 | 2.988721e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021931.01.T01 | MTR_4g079160 | 96.338 | 355 | 10 | 1 | 15 | 366 | 1 | 355 | 0.0 | 704 |
| MsG0480021931.01.T01 | MTR_5g074580 | 62.712 | 354 | 124 | 4 | 20 | 366 | 8 | 360 | 7.73e-162 | 457 |
| MsG0480021931.01.T01 | MTR_5g074600 | 61.389 | 360 | 130 | 5 | 15 | 366 | 1 | 359 | 1.29e-158 | 449 |
| MsG0480021931.01.T01 | MTR_5g074680 | 60.556 | 360 | 132 | 6 | 15 | 365 | 1 | 359 | 5.54e-154 | 437 |
| MsG0480021931.01.T01 | MTR_5g074610 | 57.020 | 349 | 115 | 4 | 24 | 366 | 7 | 326 | 2.92e-140 | 401 |
| MsG0480021931.01.T01 | MTR_5g074540 | 57.222 | 360 | 127 | 6 | 15 | 366 | 1 | 341 | 3.51e-139 | 399 |
| MsG0480021931.01.T01 | MTR_7g014570 | 47.399 | 346 | 175 | 5 | 24 | 366 | 11 | 352 | 8.61e-112 | 330 |
| MsG0480021931.01.T01 | MTR_7g014510 | 44.857 | 350 | 183 | 5 | 24 | 366 | 11 | 357 | 3.59e-107 | 318 |
| MsG0480021931.01.T01 | MTR_7g024520 | 44.350 | 354 | 187 | 4 | 15 | 364 | 1 | 348 | 3.10e-106 | 316 |
| MsG0480021931.01.T01 | MTR_4g088200 | 45.170 | 352 | 183 | 4 | 24 | 366 | 11 | 361 | 9.60e-103 | 307 |
| MsG0480021931.01.T01 | MTR_7g024500 | 43.220 | 354 | 191 | 4 | 15 | 364 | 1 | 348 | 1.51e-101 | 304 |
| MsG0480021931.01.T01 | MTR_4g033015 | 46.893 | 354 | 176 | 4 | 24 | 366 | 11 | 363 | 1.41e-99 | 299 |
| MsG0480021931.01.T01 | MTR_4g033200 | 46.610 | 354 | 177 | 4 | 24 | 366 | 11 | 363 | 1.72e-99 | 299 |
| MsG0480021931.01.T01 | MTR_4g088345 | 43.228 | 347 | 192 | 3 | 24 | 366 | 11 | 356 | 2.78e-97 | 293 |
| MsG0480021931.01.T01 | MTR_4g088190 | 45.915 | 355 | 179 | 4 | 24 | 366 | 11 | 364 | 3.21e-97 | 293 |
| MsG0480021931.01.T01 | MTR_4g033150 | 45.892 | 353 | 179 | 4 | 25 | 366 | 12 | 363 | 2.47e-96 | 291 |
| MsG0480021931.01.T01 | MTR_1g076940 | 43.017 | 358 | 186 | 8 | 22 | 366 | 9 | 361 | 5.41e-96 | 290 |
| MsG0480021931.01.T01 | MTR_4g088340 | 43.114 | 334 | 185 | 3 | 37 | 366 | 1 | 333 | 9.77e-93 | 281 |
| MsG0480021931.01.T01 | MTR_4g033170 | 44.540 | 348 | 187 | 3 | 24 | 366 | 11 | 357 | 2.47e-88 | 270 |
| MsG0480021931.01.T01 | MTR_4g033085 | 44.253 | 348 | 188 | 3 | 24 | 366 | 11 | 357 | 1.22e-84 | 261 |
| MsG0480021931.01.T01 | MTR_3g083620 | 39.252 | 321 | 184 | 7 | 33 | 347 | 27 | 342 | 1.12e-67 | 218 |
| MsG0480021931.01.T01 | MTR_4g038440 | 36.158 | 354 | 202 | 7 | 27 | 366 | 25 | 368 | 4.27e-67 | 216 |
| MsG0480021931.01.T01 | MTR_0079s0070 | 36.950 | 341 | 191 | 7 | 40 | 366 | 4 | 334 | 2.47e-65 | 211 |
| MsG0480021931.01.T01 | MTR_0017s0100 | 34.659 | 352 | 210 | 7 | 27 | 366 | 25 | 368 | 4.33e-62 | 203 |
| MsG0480021931.01.T01 | MTR_0794s0020 | 40.167 | 239 | 134 | 3 | 25 | 255 | 12 | 249 | 2.15e-56 | 185 |
| MsG0480021931.01.T01 | MTR_1g076930 | 39.419 | 241 | 134 | 6 | 37 | 269 | 1 | 237 | 3.92e-52 | 174 |
| MsG0480021931.01.T01 | MTR_7g118320 | 34.234 | 333 | 188 | 10 | 39 | 351 | 26 | 347 | 1.22e-45 | 160 |
| MsG0480021931.01.T01 | MTR_5g098170 | 32.198 | 323 | 201 | 9 | 44 | 353 | 33 | 350 | 2.21e-45 | 159 |
| MsG0480021931.01.T01 | MTR_7g118300 | 30.623 | 369 | 216 | 9 | 9 | 351 | 6 | 360 | 9.14e-45 | 158 |
| MsG0480021931.01.T01 | MTR_3g092900 | 32.229 | 332 | 211 | 9 | 44 | 365 | 34 | 361 | 1.62e-44 | 157 |
| MsG0480021931.01.T01 | MTR_7g011900 | 31.063 | 367 | 224 | 11 | 1 | 353 | 5 | 356 | 5.58e-42 | 150 |
| MsG0480021931.01.T01 | MTR_4g038440 | 33.597 | 253 | 151 | 4 | 27 | 269 | 25 | 270 | 7.48e-42 | 147 |
| MsG0480021931.01.T01 | MTR_8g024160 | 36.226 | 265 | 156 | 7 | 107 | 365 | 70 | 327 | 8.53e-42 | 149 |
| MsG0480021931.01.T01 | MTR_3g021440 | 31.627 | 332 | 210 | 9 | 41 | 361 | 38 | 363 | 2.38e-41 | 149 |
| MsG0480021931.01.T01 | MTR_1g036490 | 30.473 | 338 | 219 | 5 | 27 | 353 | 23 | 355 | 1.16e-40 | 147 |
| MsG0480021931.01.T01 | MTR_1g036460 | 29.882 | 338 | 221 | 5 | 27 | 353 | 23 | 355 | 1.48e-40 | 147 |
| MsG0480021931.01.T01 | MTR_7g012090 | 29.752 | 363 | 229 | 9 | 15 | 353 | 1 | 361 | 4.37e-40 | 145 |
| MsG0480021931.01.T01 | MTR_1g096310 | 29.261 | 352 | 221 | 11 | 18 | 353 | 19 | 358 | 5.98e-40 | 145 |
| MsG0480021931.01.T01 | MTR_0591s0010 | 32.414 | 290 | 181 | 7 | 60 | 347 | 82 | 358 | 1.16e-39 | 144 |
| MsG0480021931.01.T01 | MTR_8g068870 | 31.193 | 327 | 210 | 6 | 37 | 351 | 25 | 348 | 1.54e-39 | 144 |
| MsG0480021931.01.T01 | MTR_7g012070 | 28.926 | 363 | 232 | 9 | 15 | 353 | 1 | 361 | 4.42e-39 | 143 |
| MsG0480021931.01.T01 | MTR_8g068690 | 32.530 | 332 | 197 | 8 | 39 | 351 | 40 | 363 | 7.97e-39 | 142 |
| MsG0480021931.01.T01 | MTR_7g011990 | 27.596 | 366 | 235 | 9 | 1 | 353 | 5 | 353 | 4.29e-38 | 140 |
| MsG0480021931.01.T01 | MTR_8g068750 | 30.422 | 332 | 202 | 8 | 39 | 351 | 41 | 362 | 4.67e-38 | 140 |
| MsG0480021931.01.T01 | MTR_7g012020 | 29.444 | 360 | 223 | 12 | 8 | 352 | 11 | 354 | 3.72e-37 | 137 |
| MsG0480021931.01.T01 | MTR_3g021430 | 30.484 | 351 | 227 | 10 | 20 | 361 | 8 | 350 | 3.92e-37 | 137 |
| MsG0480021931.01.T01 | MTR_2g072790 | 30.769 | 338 | 221 | 7 | 28 | 354 | 7 | 342 | 6.51e-37 | 137 |
| MsG0480021931.01.T01 | MTR_2g055940 | 36.269 | 193 | 118 | 3 | 161 | 351 | 158 | 347 | 1.73e-36 | 135 |
| MsG0480021931.01.T01 | MTR_7g012040 | 29.338 | 317 | 213 | 7 | 46 | 353 | 40 | 354 | 2.81e-36 | 135 |
| MsG0480021931.01.T01 | MTR_1g036510 | 29.586 | 338 | 222 | 5 | 27 | 353 | 37 | 369 | 1.11e-34 | 131 |
| MsG0480021931.01.T01 | MTR_6g078850 | 28.704 | 324 | 210 | 7 | 44 | 351 | 50 | 368 | 1.25e-34 | 133 |
| MsG0480021931.01.T01 | MTR_3g096050 | 28.902 | 346 | 226 | 10 | 18 | 354 | 12 | 346 | 9.62e-34 | 128 |
| MsG0480021931.01.T01 | MTR_8g068570 | 40.491 | 163 | 95 | 2 | 172 | 333 | 156 | 317 | 1.22e-32 | 124 |
| MsG0480021931.01.T01 | MTR_3g096070 | 28.446 | 341 | 213 | 9 | 17 | 354 | 11 | 323 | 8.89e-32 | 122 |
| MsG0480021931.01.T01 | MTR_8g068730 | 37.931 | 145 | 89 | 1 | 208 | 351 | 186 | 330 | 3.02e-26 | 107 |
| MsG0480021931.01.T01 | MTR_1g050220 | 35.374 | 147 | 85 | 1 | 204 | 350 | 151 | 287 | 6.00e-23 | 97.8 |
| MsG0480021931.01.T01 | MTR_8g068600 | 34.146 | 164 | 104 | 4 | 107 | 269 | 93 | 253 | 7.20e-21 | 91.7 |
| MsG0480021931.01.T01 | MTR_8g068620 | 41.071 | 112 | 65 | 1 | 161 | 272 | 3 | 113 | 8.26e-21 | 87.0 |
| MsG0480021931.01.T01 | MTR_7g012020 | 28.881 | 277 | 166 | 12 | 8 | 269 | 11 | 271 | 2.16e-19 | 87.8 |
| MsG0480021931.01.T01 | MTR_8g068690 | 29.200 | 250 | 153 | 6 | 39 | 272 | 40 | 281 | 3.54e-18 | 84.3 |
| MsG0480021931.01.T01 | MTR_3g096050 | 28.571 | 259 | 167 | 9 | 18 | 269 | 12 | 259 | 6.69e-17 | 80.1 |
| MsG0480021931.01.T01 | MTR_1g036510 | 27.953 | 254 | 167 | 5 | 27 | 269 | 37 | 285 | 6.36e-16 | 77.8 |
| MsG0480021931.01.T01 | MTR_8g068740 | 43.421 | 76 | 43 | 0 | 208 | 283 | 186 | 261 | 1.89e-15 | 76.3 |
| MsG0480021931.01.T01 | MTR_4g025570 | 49.367 | 79 | 37 | 3 | 271 | 347 | 122 | 199 | 2.33e-13 | 68.9 |
| MsG0480021931.01.T01 | MTR_7g012020 | 28.112 | 249 | 148 | 12 | 8 | 241 | 11 | 243 | 1.66e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021931.01.T01 | AT4G35150 | 35.345 | 348 | 171 | 9 | 28 | 362 | 14 | 320 | 1.03e-61 | 201 |
| MsG0480021931.01.T01 | AT4G35160 | 34.805 | 385 | 219 | 12 | 1 | 362 | 2 | 377 | 2.88e-60 | 199 |
| MsG0480021931.01.T01 | AT5G54160 | 33.233 | 331 | 208 | 8 | 44 | 365 | 34 | 360 | 2.47e-48 | 167 |
| MsG0480021931.01.T01 | AT1G51990 | 32.288 | 319 | 200 | 9 | 58 | 366 | 50 | 362 | 5.36e-42 | 150 |
| MsG0480021931.01.T01 | AT1G51990 | 32.177 | 317 | 199 | 9 | 60 | 366 | 52 | 362 | 2.84e-41 | 149 |
| MsG0480021931.01.T01 | AT3G53140 | 31.627 | 332 | 213 | 8 | 44 | 363 | 27 | 356 | 1.31e-39 | 144 |
| MsG0480021931.01.T01 | AT1G77520 | 26.722 | 363 | 234 | 10 | 13 | 352 | 14 | 367 | 2.84e-35 | 133 |
| MsG0480021931.01.T01 | AT1G21130 | 28.746 | 327 | 206 | 9 | 44 | 351 | 40 | 358 | 1.31e-32 | 125 |
| MsG0480021931.01.T01 | AT1G63140 | 31.844 | 358 | 211 | 13 | 30 | 364 | 32 | 379 | 1.57e-32 | 125 |
| MsG0480021931.01.T01 | AT1G33030 | 30.000 | 320 | 209 | 9 | 44 | 352 | 21 | 336 | 1.79e-32 | 125 |
| MsG0480021931.01.T01 | AT1G63140 | 31.844 | 358 | 211 | 13 | 30 | 364 | 52 | 399 | 1.93e-32 | 125 |
| MsG0480021931.01.T01 | AT1G21100 | 28.354 | 328 | 208 | 9 | 44 | 352 | 40 | 359 | 4.73e-32 | 124 |
| MsG0480021931.01.T01 | AT1G76790 | 28.528 | 326 | 202 | 8 | 44 | 347 | 30 | 346 | 2.09e-31 | 122 |
| MsG0480021931.01.T01 | AT1G21110 | 28.308 | 325 | 206 | 10 | 44 | 349 | 40 | 356 | 1.80e-30 | 120 |
| MsG0480021931.01.T01 | AT5G53810 | 27.778 | 342 | 223 | 7 | 44 | 365 | 40 | 377 | 9.81e-30 | 118 |
| MsG0480021931.01.T01 | AT1G21120 | 28.135 | 327 | 208 | 10 | 44 | 351 | 40 | 358 | 1.25e-29 | 117 |
| MsG0480021931.01.T01 | AT1G21120 | 28.049 | 328 | 209 | 10 | 44 | 352 | 88 | 407 | 3.07e-29 | 117 |
| MsG0480021931.01.T01 | AT5G37170 | 35.000 | 200 | 116 | 7 | 172 | 363 | 38 | 231 | 9.78e-29 | 112 |
| MsG0480021931.01.T01 | AT5G37170 | 35.000 | 200 | 116 | 7 | 172 | 363 | 138 | 331 | 1.53e-28 | 114 |
| MsG0480021931.01.T01 | AT5G37170 | 35.714 | 182 | 107 | 6 | 190 | 363 | 4 | 183 | 8.79e-28 | 108 |
| MsG0480021931.01.T01 | AT1G77530 | 28.814 | 354 | 228 | 9 | 13 | 347 | 14 | 362 | 9.08e-27 | 110 |
| MsG0480021931.01.T01 | AT1G62900 | 35.922 | 206 | 119 | 6 | 166 | 364 | 4 | 203 | 8.20e-26 | 103 |
| MsG0480021931.01.T01 | AT1G63140 | 30.855 | 269 | 155 | 11 | 20 | 269 | 46 | 302 | 2.55e-13 | 70.5 |
| MsG0480021931.01.T01 | AT1G33030 | 27.966 | 236 | 156 | 9 | 44 | 269 | 21 | 252 | 2.97e-13 | 69.7 |
| MsG0480021931.01.T01 | AT1G33030 | 27.119 | 236 | 158 | 8 | 44 | 269 | 21 | 252 | 6.25e-13 | 68.9 |
Find 89 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTCAATTGCACATTTA+AGG | 0.108406 | 4:-66114145 | None:intergenic |
| AAAATAACGGTGTTGCATTT+TGG | 0.128208 | 4:+66114486 | MsG0480021931.01.T01:CDS |
| GAATTTATGCTTTAAGATTT+TGG | 0.158961 | 4:-66115806 | None:intergenic |
| AGCACAATTGTTCTATGATT+TGG | 0.221525 | 4:+66115403 | MsG0480021931.01.T01:CDS |
| CATGGTGTCAACTTTCTAAT+TGG | 0.222939 | 4:+66114429 | MsG0480021931.01.T01:CDS |
| TGAACAAATTATTGTGATTA+GGG | 0.236770 | 4:-66114526 | None:intergenic |
| CAATTCAATTGCACATTTAA+GGG | 0.288826 | 4:-66114144 | None:intergenic |
| AATACAATGCACTCAATGTT+TGG | 0.294021 | 4:-66114689 | None:intergenic |
| TTGAACAAATTATTGTGATT+AGG | 0.297769 | 4:-66114527 | None:intergenic |
| CAAACTTACAGAGTACAAAA+AGG | 0.311906 | 4:-66115661 | None:intergenic |
| CAATTACTAGTACTGGTACT+AGG | 0.343088 | 4:-66115555 | None:intergenic |
| GATCTTCCACATGTTGTTGA+TGG | 0.360459 | 4:+66114713 | MsG0480021931.01.T01:CDS |
| TTGAAGTGCTTCACACTATA+AGG | 0.361244 | 4:+66115575 | MsG0480021931.01.T01:three_prime_UTR |
| TGCAACATGATCTTCACTTT+GGG | 0.361816 | 4:-66114060 | None:intergenic |
| CCAGTGTATTCTCTGATTGT+TGG | 0.375578 | 4:+66115599 | MsG0480021931.01.T01:three_prime_UTR |
| CATGTTGTTGATGGCTTACA+AGG | 0.376283 | 4:+66114722 | MsG0480021931.01.T01:CDS |
| TGCATCTAGATTATTGCTTA+AGG | 0.382421 | 4:+66114346 | MsG0480021931.01.T01:CDS |
| CACCATGGTTTACTCAGAAC+TGG | 0.397423 | 4:-66114413 | None:intergenic |
| TAAAGGGGTGTTTGAAGGAT+TGG | 0.402290 | 4:+66114604 | MsG0480021931.01.T01:CDS |
| CCAGATGTTATACACAACTA+TGG | 0.417598 | 4:+66114173 | MsG0480021931.01.T01:CDS |
| TGAAAATGTGGTTGAATACT+TGG | 0.417805 | 4:-66114103 | None:intergenic |
| TTGCAACATGATCTTCACTT+TGG | 0.418082 | 4:-66114061 | None:intergenic |
| GTTTGAAGGATTGGAATCAT+TGG | 0.419856 | 4:+66114613 | MsG0480021931.01.T01:CDS |
| ATACAATGCACTCAATGTTT+GGG | 0.429620 | 4:-66114688 | None:intergenic |
| AGTGAAAACTTAAAATATGT+TGG | 0.443663 | 4:+66114746 | MsG0480021931.01.T01:CDS |
| GTTCTATGATTTGGAGATGA+TGG | 0.453028 | 4:+66115412 | MsG0480021931.01.T01:CDS |
| TATGGCTTGTGAAACAAGAT+TGG | 0.456549 | 4:+66114556 | MsG0480021931.01.T01:CDS |
| CTACCTTGAGTAAAATTGAA+TGG | 0.457108 | 4:-66114799 | None:intergenic |
| GTGTAACCCGTGCCGATGCA+CGG | 0.458308 | 4:+66115746 | MsG0480021931.01.T01:three_prime_UTR |
| CCATAGTTGTGTATAACATC+TGG | 0.459982 | 4:-66114173 | None:intergenic |
| AACATAGATGTCATACTAAA+GGG | 0.460641 | 4:-66114374 | None:intergenic |
| GTTGATGTTGGTGGAGGCAT+AGG | 0.464053 | 4:+66114635 | MsG0480021931.01.T01:CDS |
| CCAATCCACCCTTCTAAAAC+CGG | 0.467765 | 4:+66114233 | MsG0480021931.01.T01:CDS |
| GAGATGATGGTGTTGGTCAA+TGG | 0.468447 | 4:+66115425 | MsG0480021931.01.T01:CDS |
| CAACATAGATGTCATACTAA+AGG | 0.471280 | 4:-66114375 | None:intergenic |
| AATTATTGTGATTAGGGTCA+TGG | 0.475174 | 4:-66114520 | None:intergenic |
| AAGAGAGAAATGAGAAAGAA+TGG | 0.475412 | 4:+66115450 | MsG0480021931.01.T01:CDS |
| TACCTTGAGTAAAATTGAAT+GGG | 0.480602 | 4:-66114798 | None:intergenic |
| TTGTGATGGGAAAGTGTAAA+GGG | 0.481829 | 4:+66114588 | MsG0480021931.01.T01:CDS |
| TAATTTGTTCAATGAAGCTA+TGG | 0.484158 | 4:+66114538 | MsG0480021931.01.T01:CDS |
| AAGTGTAAAGGGGTGTTTGA+AGG | 0.495522 | 4:+66114599 | MsG0480021931.01.T01:CDS |
| AATTACTAGTACTGGTACTA+GGG | 0.499071 | 4:-66115554 | None:intergenic |
| AGCACTTCAATTACTAGTAC+TGG | 0.500351 | 4:-66115562 | None:intergenic |
| GTCAACCCGTGCATCGGCAC+GGG | 0.504902 | 4:-66115752 | None:intergenic |
| TTGGAATCATTGGTTGATGT+TGG | 0.505871 | 4:+66114623 | MsG0480021931.01.T01:CDS |
| TCTATGTTGCATGTCATACT+TGG | 0.507881 | 4:+66114389 | MsG0480021931.01.T01:CDS |
| CTGAACCGGTGTGACAGTTA+CGG | 0.509380 | 4:+66115774 | MsG0480021931.01.T01:three_prime_UTR |
| TACAAGATAACTCATGGTCT+TGG | 0.510347 | 4:+66115506 | MsG0480021931.01.T01:CDS |
| AGGCATAGGGACTATTACTA+AGG | 0.514166 | 4:+66114649 | MsG0480021931.01.T01:CDS |
| AGGAAGCAATAAGGAGCAAA+GGG | 0.515933 | 4:+66115321 | MsG0480021931.01.T01:CDS |
| TTGATGTTGGTGGAGGCATA+GGG | 0.518405 | 4:+66114636 | MsG0480021931.01.T01:CDS |
| TCTTCACTTTGGGATCCCAT+TGG | 0.518428 | 4:-66114050 | None:intergenic |
| GAATCATTGGTTGATGTTGG+TGG | 0.520300 | 4:+66114626 | MsG0480021931.01.T01:CDS |
| GATGCACGGGTTGACTGAAC+CGG | 0.525870 | 4:+66115760 | MsG0480021931.01.T01:three_prime_UTR |
| AGTCAACCCGTGCATCGGCA+CGG | 0.525999 | 4:-66115753 | None:intergenic |
| GTTGAGGAATCAAAACCAAT+GGG | 0.529523 | 4:+66114035 | MsG0480021931.01.T01:CDS |
| AAGGGAATAAAACACACAAT+CGG | 0.535218 | 4:-66115642 | None:intergenic |
| AGTAAAATTGAATGGGTAGG+AGG | 0.536012 | 4:-66114791 | None:intergenic |
| TGAAGGGTGTATTACATGAC+TGG | 0.541126 | 4:+66115261 | MsG0480021931.01.T01:intron |
| AGTTGAGGAATCAAAACCAA+TGG | 0.547437 | 4:+66114034 | MsG0480021931.01.T01:CDS |
| TGTAACCCGTGCCGATGCAC+GGG | 0.557705 | 4:+66115747 | MsG0480021931.01.T01:three_prime_UTR |
| GATAATCATAGACGCAGTGA+TGG | 0.557902 | 4:+66115349 | MsG0480021931.01.T01:CDS |
| AGTAACTACAAGATAACTCA+TGG | 0.563555 | 4:+66115500 | MsG0480021931.01.T01:CDS |
| GAAAACTTAAAATATGTTGG+AGG | 0.568473 | 4:+66114749 | MsG0480021931.01.T01:CDS |
| ATAATCATAGACGCAGTGAT+GGG | 0.569255 | 4:+66115350 | MsG0480021931.01.T01:CDS |
| AGTTTATGAAACTGAAAATG+TGG | 0.571931 | 4:-66114115 | None:intergenic |
| CGCAGTGATGGGGAATGAGA+AGG | 0.578489 | 4:+66115361 | MsG0480021931.01.T01:CDS |
| ATTGGCTTCTAGTGTTGTGA+TGG | 0.581687 | 4:+66114574 | MsG0480021931.01.T01:CDS |
| AAGGAAGCAATAAGGAGCAA+AGG | 0.587760 | 4:+66115320 | MsG0480021931.01.T01:CDS |
| TATCGTCTCTATTTGTTGTG+AGG | 0.588566 | 4:-66114012 | None:intergenic |
| GGTTCAGTCAACCCGTGCAT+CGG | 0.589626 | 4:-66115758 | None:intergenic |
| TCATTGGTTGATGTTGGTGG+AGG | 0.592377 | 4:+66114629 | MsG0480021931.01.T01:CDS |
| TTGAGTAAAATTGAATGGGT+AGG | 0.594723 | 4:-66114794 | None:intergenic |
| TTTCCGTGTGAAAAGGTGAA+GGG | 0.595347 | 4:-66114466 | None:intergenic |
| GAAAATGTGGTTGAATACTT+GGG | 0.602349 | 4:-66114102 | None:intergenic |
| GTTGTGATGGGAAAGTGTAA+AGG | 0.606315 | 4:+66114587 | MsG0480021931.01.T01:CDS |
| TGATTTGGAGATGATGGTGT+TGG | 0.610739 | 4:+66115418 | MsG0480021931.01.T01:CDS |
| TGTAAGCCATCAACAACATG+TGG | 0.632178 | 4:-66114719 | None:intergenic |
| TAGATGTCATACTAAAGGGA+TGG | 0.642155 | 4:-66114370 | None:intergenic |
| CAATTAGAAAGTTGACACCA+TGG | 0.642868 | 4:-66114428 | None:intergenic |
| CATCAAGCGATATATGTCAC+CGG | 0.647643 | 4:-66114252 | None:intergenic |
| TTGGCTTCTAGTGTTGTGAT+GGG | 0.650343 | 4:+66114575 | MsG0480021931.01.T01:CDS |
| TAATCATAGACGCAGTGATG+GGG | 0.654303 | 4:+66115351 | MsG0480021931.01.T01:CDS |
| ACAAATAGAGACGATAGTTG+AGG | 0.654503 | 4:+66114019 | MsG0480021931.01.T01:CDS |
| GTCCAGTTCTGAGTAAACCA+TGG | 0.675739 | 4:+66114411 | MsG0480021931.01.T01:CDS |
| TGTGATGGGAAAGTGTAAAG+GGG | 0.694075 | 4:+66114589 | MsG0480021931.01.T01:CDS |
| ATTACATGACTGGAACGATG+AGG | 0.712908 | 4:+66115271 | MsG0480021931.01.T01:CDS |
| CCAACAATCAGAGAATACAC+TGG | 0.713575 | 4:-66115599 | None:intergenic |
| TTAGTCCGTAACTGTCACAC+CGG | 0.732730 | 4:-66115779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACTTAATCTTATATTTA+GGG | + | Chr4:66115165-66115184 | MsG0480021931.01.T01:intron | 10.0% |
| !! | TATAACTTAATCTTATATTT+AGG | + | Chr4:66115164-66115183 | MsG0480021931.01.T01:intron | 10.0% |
| !!! | TTAATTTATTTTTTAGTCTT+TGG | + | Chr4:66114871-66114890 | MsG0480021931.01.T01:intron | 10.0% |
| !!! | TTATTAAATTTGTTGAAAAT+TGG | - | Chr4:66115088-66115107 | None:intergenic | 10.0% |
| !!! | TTTTCTTTCTTTATTTTTAT+GGG | + | Chr4:66114978-66114997 | MsG0480021931.01.T01:intron | 10.0% |
| !!! | TTTTTCTTTCTTTATTTTTA+TGG | + | Chr4:66114977-66114996 | MsG0480021931.01.T01:intron | 10.0% |
| !!! | TGTTATTTTTTATTTTTGAG+AGG | + | Chr4:66115684-66115703 | MsG0480021931.01.T01:three_prime_UTR | 15.0% |
| !! | AGTGAAAACTTAAAATATGT+TGG | + | Chr4:66114746-66114765 | MsG0480021931.01.T01:CDS | 20.0% |
| !! | ATATGATATGATATACATGA+AGG | + | Chr4:66115244-66115263 | MsG0480021931.01.T01:intron | 20.0% |
| !! | TATGATATGATATACATGAA+GGG | + | Chr4:66115245-66115264 | MsG0480021931.01.T01:intron | 20.0% |
| !! | TGAACAAATTATTGTGATTA+GGG | - | Chr4:66114529-66114548 | None:intergenic | 20.0% |
| !! | TTGAACAAATTATTGTGATT+AGG | - | Chr4:66114530-66114549 | None:intergenic | 20.0% |
| !!! | AAATTGTTCTTTTGTTTTTG+TGG | - | Chr4:66114853-66114872 | None:intergenic | 20.0% |
| ! | AAACTTACAGAGTACAAAAA+GGG | - | Chr4:66115663-66115682 | None:intergenic | 25.0% |
| ! | AACATAGATGTCATACTAAA+GGG | - | Chr4:66114377-66114396 | None:intergenic | 25.0% |
| ! | ACAATTCAATTGCACATTTA+AGG | - | Chr4:66114148-66114167 | None:intergenic | 25.0% |
| ! | AGTTTATGAAACTGAAAATG+TGG | - | Chr4:66114118-66114137 | None:intergenic | 25.0% |
| ! | CAATTCAATTGCACATTTAA+GGG | - | Chr4:66114147-66114166 | None:intergenic | 25.0% |
| ! | GAAAACTTAAAATATGTTGG+AGG | + | Chr4:66114749-66114768 | MsG0480021931.01.T01:CDS | 25.0% |
| ! | GAAAATACTCAAAAAATGCA+AGG | + | Chr4:66115301-66115320 | MsG0480021931.01.T01:CDS | 25.0% |
| ! | TACCTTGAGTAAAATTGAAT+GGG | - | Chr4:66114801-66114820 | None:intergenic | 25.0% |
| ! | TAGTATGCTAATTATGTTGT+TGG | + | Chr4:66114819-66114838 | MsG0480021931.01.T01:intron | 25.0% |
| ! | TATATTTAGGGACTTCTAAA+TGG | + | Chr4:66115177-66115196 | MsG0480021931.01.T01:intron | 25.0% |
| !!! | TAATTTGTTCAATGAAGCTA+TGG | + | Chr4:66114538-66114557 | MsG0480021931.01.T01:CDS | 25.0% |
| AAAAATGCAAGGAAGCAATA+AGG | + | Chr4:66115312-66115331 | MsG0480021931.01.T01:CDS | 30.0% | |
| AAGAGAGAAATGAGAAAGAA+TGG | + | Chr4:66115450-66115469 | MsG0480021931.01.T01:CDS | 30.0% | |
| AAGGGAATAAAACACACAAT+CGG | - | Chr4:66115645-66115664 | None:intergenic | 30.0% | |
| AATACAATGCACTCAATGTT+TGG | - | Chr4:66114692-66114711 | None:intergenic | 30.0% | |
| AATTATTGTGATTAGGGTCA+TGG | - | Chr4:66114523-66114542 | None:intergenic | 30.0% | |
| AGCACAATTGTTCTATGATT+TGG | + | Chr4:66115403-66115422 | MsG0480021931.01.T01:CDS | 30.0% | |
| AGTAACTACAAGATAACTCA+TGG | + | Chr4:66115500-66115519 | MsG0480021931.01.T01:CDS | 30.0% | |
| ATACAATGCACTCAATGTTT+GGG | - | Chr4:66114691-66114710 | None:intergenic | 30.0% | |
| CAAACTTACAGAGTACAAAA+AGG | - | Chr4:66115664-66115683 | None:intergenic | 30.0% | |
| CAACATAGATGTCATACTAA+AGG | - | Chr4:66114378-66114397 | None:intergenic | 30.0% | |
| CTACCTTGAGTAAAATTGAA+TGG | - | Chr4:66114802-66114821 | None:intergenic | 30.0% | |
| GAAAATGTGGTTGAATACTT+GGG | - | Chr4:66114105-66114124 | None:intergenic | 30.0% | |
| TGAAAATGTGGTTGAATACT+TGG | - | Chr4:66114106-66114125 | None:intergenic | 30.0% | |
| TGCATCTAGATTATTGCTTA+AGG | + | Chr4:66114346-66114365 | MsG0480021931.01.T01:CDS | 30.0% | |
| TTGAGTAAAATTGAATGGGT+AGG | - | Chr4:66114797-66114816 | None:intergenic | 30.0% | |
| ! | CAAAGAGAGTCTTATGTTTA+GGG | - | Chr4:66114954-66114973 | None:intergenic | 30.0% |
| ! | GGGACAAACTTTCAAATTTT+TGG | + | Chr4:66114998-66115017 | MsG0480021931.01.T01:intron | 30.0% |
| ! | TACCCATTCAATTTTACTCA+AGG | + | Chr4:66114796-66114815 | MsG0480021931.01.T01:CDS | 30.0% |
| ! | TCAAAGAGAGTCTTATGTTT+AGG | - | Chr4:66114955-66114974 | None:intergenic | 30.0% |
| !! | AATTACTAGTACTGGTACTA+GGG | - | Chr4:66115557-66115576 | None:intergenic | 30.0% |
| !!! | AAAATAACGGTGTTGCATTT+TGG | + | Chr4:66114486-66114505 | MsG0480021931.01.T01:CDS | 30.0% |
| !!! | AAAGAAATGAGTTTTGAGAG+TGG | - | Chr4:66114209-66114228 | None:intergenic | 30.0% |
| !!! | AAATAACGGTGTTGCATTTT+GGG | + | Chr4:66114487-66114506 | MsG0480021931.01.T01:CDS | 30.0% |
| !!! | AAGAAATGAGTTTTGAGAGT+GGG | - | Chr4:66114208-66114227 | None:intergenic | 30.0% |
| ACAAATAGAGACGATAGTTG+AGG | + | Chr4:66114019-66114038 | MsG0480021931.01.T01:CDS | 35.0% | |
| AGCACTTCAATTACTAGTAC+TGG | - | Chr4:66115565-66115584 | None:intergenic | 35.0% | |
| AGTAAAATTGAATGGGTAGG+AGG | - | Chr4:66114794-66114813 | None:intergenic | 35.0% | |
| AGTTGAGGAATCAAAACCAA+TGG | + | Chr4:66114034-66114053 | MsG0480021931.01.T01:CDS | 35.0% | |
| ATAATCATAGACGCAGTGAT+GGG | + | Chr4:66115350-66115369 | MsG0480021931.01.T01:CDS | 35.0% | |
| CAATTAGAAAGTTGACACCA+TGG | - | Chr4:66114431-66114450 | None:intergenic | 35.0% | |
| CCAGATGTTATACACAACTA+TGG | + | Chr4:66114173-66114192 | MsG0480021931.01.T01:CDS | 35.0% | |
| CCATAGTTGTGTATAACATC+TGG | - | Chr4:66114176-66114195 | None:intergenic | 35.0% | |
| GTTGAGGAATCAAAACCAAT+GGG | + | Chr4:66114035-66114054 | MsG0480021931.01.T01:CDS | 35.0% | |
| GTTTGAAGGATTGGAATCAT+TGG | + | Chr4:66114613-66114632 | MsG0480021931.01.T01:CDS | 35.0% | |
| TACAAGATAACTCATGGTCT+TGG | + | Chr4:66115506-66115525 | MsG0480021931.01.T01:CDS | 35.0% | |
| TAGATGTCATACTAAAGGGA+TGG | - | Chr4:66114373-66114392 | None:intergenic | 35.0% | |
| TCTATGTTGCATGTCATACT+TGG | + | Chr4:66114389-66114408 | MsG0480021931.01.T01:CDS | 35.0% | |
| TGCAACATGATCTTCACTTT+GGG | - | Chr4:66114063-66114082 | None:intergenic | 35.0% | |
| TTGCAACATGATCTTCACTT+TGG | - | Chr4:66114064-66114083 | None:intergenic | 35.0% | |
| ! | CATGGTGTCAACTTTCTAAT+TGG | + | Chr4:66114429-66114448 | MsG0480021931.01.T01:CDS | 35.0% |
| ! | CCTTTTCACACGGAAAATAA+CGG | + | Chr4:66114473-66114492 | MsG0480021931.01.T01:CDS | 35.0% |
| ! | GTTCTATGATTTGGAGATGA+TGG | + | Chr4:66115412-66115431 | MsG0480021931.01.T01:CDS | 35.0% |
| ! | TATGGCTTGTGAAACAAGAT+TGG | + | Chr4:66114556-66114575 | MsG0480021931.01.T01:CDS | 35.0% |
| ! | TTGAAGTGCTTCACACTATA+AGG | + | Chr4:66115575-66115594 | MsG0480021931.01.T01:three_prime_UTR | 35.0% |
| ! | TTGGAATCATTGGTTGATGT+TGG | + | Chr4:66114623-66114642 | MsG0480021931.01.T01:CDS | 35.0% |
| ! | TTGTGATGGGAAAGTGTAAA+GGG | + | Chr4:66114588-66114607 | MsG0480021931.01.T01:CDS | 35.0% |
| !! | ATGCGAGTTTTAACACATTC+TGG | + | Chr4:66114272-66114291 | MsG0480021931.01.T01:CDS | 35.0% |
| !! | CAATTACTAGTACTGGTACT+AGG | - | Chr4:66115558-66115577 | None:intergenic | 35.0% |
| !! | TATCGTCTCTATTTGTTGTG+AGG | - | Chr4:66114015-66114034 | None:intergenic | 35.0% |
| !!! | ATATGTCACCGGTTTTAGAA+GGG | - | Chr4:66114244-66114263 | None:intergenic | 35.0% |
| !!! | TATATGTCACCGGTTTTAGA+AGG | - | Chr4:66114245-66114264 | None:intergenic | 35.0% |
| !!! | TGGTTTTAAGTCTCTCATTG+AGG | + | Chr4:66115526-66115545 | MsG0480021931.01.T01:CDS | 35.0% |
| AAGGAAGCAATAAGGAGCAA+AGG | + | Chr4:66115320-66115339 | MsG0480021931.01.T01:CDS | 40.0% | |
| ACCAGCAGAGAAAAACAACT+TGG | - | Chr4:66115477-66115496 | None:intergenic | 40.0% | |
| AGGAAGCAATAAGGAGCAAA+GGG | + | Chr4:66115321-66115340 | MsG0480021931.01.T01:CDS | 40.0% | |
| AGGCATAGGGACTATTACTA+AGG | + | Chr4:66114649-66114668 | MsG0480021931.01.T01:CDS | 40.0% | |
| ATTACATGACTGGAACGATG+AGG | + | Chr4:66115271-66115290 | MsG0480021931.01.T01:CDS | 40.0% | |
| CATCAAGCGATATATGTCAC+CGG | - | Chr4:66114255-66114274 | None:intergenic | 40.0% | |
| CCAACAATCAGAGAATACAC+TGG | - | Chr4:66115602-66115621 | None:intergenic | 40.0% | |
| CCAGTGTATTCTCTGATTGT+TGG | + | Chr4:66115599-66115618 | MsG0480021931.01.T01:three_prime_UTR | 40.0% | |
| GATAATCATAGACGCAGTGA+TGG | + | Chr4:66115349-66115368 | MsG0480021931.01.T01:CDS | 40.0% | |
| GATCTTCCACATGTTGTTGA+TGG | + | Chr4:66114713-66114732 | MsG0480021931.01.T01:CDS | 40.0% | |
| TAATCATAGACGCAGTGATG+GGG | + | Chr4:66115351-66115370 | MsG0480021931.01.T01:CDS | 40.0% | |
| TGTAAGCCATCAACAACATG+TGG | - | Chr4:66114722-66114741 | None:intergenic | 40.0% | |
| TTGGCTTCTAGTGTTGTGAT+GGG | + | Chr4:66114575-66114594 | MsG0480021931.01.T01:CDS | 40.0% | |
| TTTCCGTGTGAAAAGGTGAA+GGG | - | Chr4:66114469-66114488 | None:intergenic | 40.0% | |
| ! | ATTGGCTTCTAGTGTTGTGA+TGG | + | Chr4:66114574-66114593 | MsG0480021931.01.T01:CDS | 40.0% |
| ! | GAATCATTGGTTGATGTTGG+TGG | + | Chr4:66114626-66114645 | MsG0480021931.01.T01:CDS | 40.0% |
| ! | GTTGTGATGGGAAAGTGTAA+AGG | + | Chr4:66114587-66114606 | MsG0480021931.01.T01:CDS | 40.0% |
| ! | TGAAGGGTGTATTACATGAC+TGG | + | Chr4:66115261-66115280 | MsG0480021931.01.T01:intron | 40.0% |
| ! | TGATTTGGAGATGATGGTGT+TGG | + | Chr4:66115418-66115437 | MsG0480021931.01.T01:CDS | 40.0% |
| ! | TGTGATGGGAAAGTGTAAAG+GGG | + | Chr4:66114589-66114608 | MsG0480021931.01.T01:CDS | 40.0% |
| ! | TTTTCCGTGTGAAAAGGTGA+AGG | - | Chr4:66114470-66114489 | None:intergenic | 40.0% |
| !! | AAGTGTAAAGGGGTGTTTGA+AGG | + | Chr4:66114599-66114618 | MsG0480021931.01.T01:CDS | 40.0% |
| !! | CATGTTGTTGATGGCTTACA+AGG | + | Chr4:66114722-66114741 | MsG0480021931.01.T01:CDS | 40.0% |
| !! | CCGTTATTTTCCGTGTGAAA+AGG | - | Chr4:66114476-66114495 | None:intergenic | 40.0% |
| !! | TAAAGGGGTGTTTGAAGGAT+TGG | + | Chr4:66114604-66114623 | MsG0480021931.01.T01:CDS | 40.0% |
| !!! | ATGAGTTTTGAGAGTGGGAT+TGG | - | Chr4:66114203-66114222 | None:intergenic | 40.0% |
| !!! | GTTGCATTTTGGGATTATGC+TGG | + | Chr4:66114497-66114516 | MsG0480021931.01.T01:CDS | 40.0% |
| !!! | TCCAAGTTGTTTTTCTCTGC+TGG | + | Chr4:66115473-66115492 | MsG0480021931.01.T01:CDS | 40.0% |
| CACCATGGTTTACTCAGAAC+TGG | - | Chr4:66114416-66114435 | None:intergenic | 45.0% | |
| TTAGTCCGTAACTGTCACAC+CGG | - | Chr4:66115782-66115801 | None:intergenic | 45.0% | |
| ! | TCATTGGTTGATGTTGGTGG+AGG | + | Chr4:66114629-66114648 | MsG0480021931.01.T01:CDS | 45.0% |
| ! | TGACCCTTCACCTTTTCACA+CGG | + | Chr4:66114463-66114482 | MsG0480021931.01.T01:CDS | 45.0% |
| ! | TTGATGTTGGTGGAGGCATA+GGG | + | Chr4:66114636-66114655 | MsG0480021931.01.T01:CDS | 45.0% |
| !! | CCAATCCACCCTTCTAAAAC+CGG | + | Chr4:66114233-66114252 | MsG0480021931.01.T01:CDS | 45.0% |
| !! | GAGATGATGGTGTTGGTCAA+TGG | + | Chr4:66115425-66115444 | MsG0480021931.01.T01:CDS | 45.0% |
| !! | GTCCAGTTCTGAGTAAACCA+TGG | + | Chr4:66114411-66114430 | MsG0480021931.01.T01:CDS | 45.0% |
| !! | TCTTCACTTTGGGATCCCAT+TGG | - | Chr4:66114053-66114072 | None:intergenic | 45.0% |
| !!! | GTTTTGAGAGTGGGATTGGT+TGG | - | Chr4:66114199-66114218 | None:intergenic | 45.0% |
| CTGAACCGGTGTGACAGTTA+CGG | + | Chr4:66115774-66115793 | MsG0480021931.01.T01:three_prime_UTR | 50.0% | |
| ! | GTTGATGTTGGTGGAGGCAT+AGG | + | Chr4:66114635-66114654 | MsG0480021931.01.T01:CDS | 50.0% |
| !!! | CCGGTTTTAGAAGGGTGGAT+TGG | - | Chr4:66114236-66114255 | None:intergenic | 50.0% |
| !!! | TGTCACCGGTTTTAGAAGGG+TGG | - | Chr4:66114241-66114260 | None:intergenic | 50.0% |
| GGTTCAGTCAACCCGTGCAT+CGG | - | Chr4:66115761-66115780 | None:intergenic | 55.0% | |
| ! | CGCAGTGATGGGGAATGAGA+AGG | + | Chr4:66115361-66115380 | MsG0480021931.01.T01:CDS | 55.0% |
| ! | GATGCACGGGTTGACTGAAC+CGG | + | Chr4:66115760-66115779 | MsG0480021931.01.T01:three_prime_UTR | 55.0% |
| ! | AGTCAACCCGTGCATCGGCA+CGG | - | Chr4:66115756-66115775 | None:intergenic | 60.0% |
| ! | GTGTAACCCGTGCCGATGCA+CGG | + | Chr4:66115746-66115765 | MsG0480021931.01.T01:three_prime_UTR | 60.0% |
| ! | TGTAACCCGTGCCGATGCAC+GGG | + | Chr4:66115747-66115766 | MsG0480021931.01.T01:three_prime_UTR | 60.0% |
| ! | GTCAACCCGTGCATCGGCAC+GGG | - | Chr4:66115755-66115774 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 66114011 | 66115819 | 66114011 | ID=MsG0480021931.01;Name=MsG0480021931.01 |
| Chr4 | mRNA | 66114011 | 66115819 | 66114011 | ID=MsG0480021931.01.T01;Parent=MsG0480021931.01;Name=MsG0480021931.01.T01;_AED=0.45;_eAED=0.45;_QI=0|1|0.5|1|1|1|2|260|366 |
| Chr4 | exon | 66114011 | 66114817 | 66114011 | ID=MsG0480021931.01.T01:exon:7280;Parent=MsG0480021931.01.T01 |
| Chr4 | exon | 66115266 | 66115819 | 66115266 | ID=MsG0480021931.01.T01:exon:7281;Parent=MsG0480021931.01.T01 |
| Chr4 | CDS | 66114011 | 66114817 | 66114011 | ID=MsG0480021931.01.T01:cds;Parent=MsG0480021931.01.T01 |
| Chr4 | CDS | 66115266 | 66115559 | 66115266 | ID=MsG0480021931.01.T01:cds;Parent=MsG0480021931.01.T01 |
| Chr4 | three_prime_UTR | 66115560 | 66115819 | 66115560 | ID=MsG0480021931.01.T01:three_prime_utr;Parent=MsG0480021931.01.T01 |
| Gene Sequence |
| Protein sequence |
