Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043989.01.T01 | XP_013445246.1 | 96.795 | 156 | 5 | 0 | 1 | 156 | 1 | 156 | 1.30E-107 | 313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043989.01.T01 | Q941R6 | 35.294 | 153 | 95 | 4 | 3 | 152 | 20 | 171 | 1.99E-23 | 93.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043989.01.T01 | I3SJ62 | 96.795 | 156 | 5 | 0 | 1 | 156 | 1 | 156 | 6.23e-108 | 313 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0880043989.01 | 0.864382 | 1.266142e-64 | 3.967579e-61 |
| MsG0080048652.01 | MsG0880043989.01 | 0.878981 | 1.807849e-69 | 9.633824e-66 |
| MsG0080048694.01 | MsG0880043989.01 | -0.810699 | 1.012106e-50 | 6.143704e-48 |
| MsG0080048695.01 | MsG0880043989.01 | -0.810830 | 9.483013e-51 | 5.776523e-48 |
| MsG0080048889.01 | MsG0880043989.01 | 0.840647 | 7.668541e-58 | 1.099376e-54 |
| MsG0080048948.01 | MsG0880043989.01 | -0.804902 | 1.728280e-49 | 9.019362e-47 |
| MsG0180000551.01 | MsG0880043989.01 | 0.813951 | 1.973743e-51 | 1.306949e-48 |
| MsG0180001108.01 | MsG0880043989.01 | 0.823921 | 1.067411e-53 | 9.317396e-51 |
| MsG0180001925.01 | MsG0880043989.01 | -0.811295 | 7.518595e-51 | 4.636307e-48 |
| MsG0880043948.01 | MsG0880043989.01 | 0.812786 | 3.558027e-51 | 2.282943e-48 |
| MsG0880043959.01 | MsG0880043989.01 | 0.809532 | 1.806227e-50 | 1.063159e-47 |
| MsG0880043961.01 | MsG0880043989.01 | 0.969973 | 6.463550e-131 | 6.180167e-125 |
| MsG0880043983.01 | MsG0880043989.01 | 0.898690 | 4.142475e-77 | 4.951156e-73 |
| MsG0880043989.01 | MsG0880045054.01 | 0.867650 | 1.170199e-65 | 4.116199e-62 |
| MsG0880043989.01 | MsG0880045683.01 | 0.804509 | 2.088107e-49 | 1.078556e-46 |
| MsG0880043989.01 | MsG0880045790.01 | 0.845458 | 4.009837e-59 | 6.686594e-56 |
| MsG0880043989.01 | MsG0880045804.01 | 0.828079 | 1.097301e-54 | 1.079358e-51 |
| MsG0880043989.01 | MsG0880045808.01 | 0.815346 | 9.688556e-52 | 6.663059e-49 |
| MsG0880043989.01 | MsG0880046137.01 | 0.804535 | 2.062034e-49 | 1.065815e-46 |
| MsG0880043989.01 | MsG0880046174.01 | -0.809339 | 1.986635e-50 | 1.163364e-47 |
| MsG0880043989.01 | MsG0880046463.01 | 0.821729 | 3.459102e-53 | 2.837244e-50 |
| MsG0880043989.01 | MsG0880046693.01 | 0.801427 | 9.049313e-49 | 4.320420e-46 |
| MsG0880043989.01 | MsG0880047493.01 | 0.820215 | 7.715892e-53 | 6.067522e-50 |
| MsG0880043989.01 | MsG0880047714.01 | 0.812272 | 4.609288e-51 | 2.917720e-48 |
| MsG0180002808.01 | MsG0880043989.01 | 0.801954 | 7.055258e-49 | 3.413594e-46 |
| MsG0180003849.01 | MsG0880043989.01 | 0.813710 | 2.229756e-51 | 1.466980e-48 |
| MsG0180003955.01 | MsG0880043989.01 | 0.831759 | 1.391255e-55 | 1.524404e-52 |
| MsG0180004510.01 | MsG0880043989.01 | 0.839368 | 1.652034e-57 | 2.276621e-54 |
| MsG0180004559.01 | MsG0880043989.01 | 0.809293 | 2.032802e-50 | 1.188935e-47 |
| MsG0180005272.01 | MsG0880043989.01 | 0.813153 | 2.955914e-51 | 1.915311e-48 |
| MsG0180005757.01 | MsG0880043989.01 | 0.830167 | 3.421163e-55 | 3.576410e-52 |
| MsG0180006026.01 | MsG0880043989.01 | 0.817488 | 3.213303e-52 | 2.343375e-49 |
| MsG0180006182.01 | MsG0880043989.01 | 0.821360 | 4.207650e-53 | 3.415706e-50 |
| MsG0180006191.01 | MsG0880043989.01 | 0.822833 | 1.917077e-53 | 1.622810e-50 |
| MsG0280006423.01 | MsG0880043989.01 | 0.801669 | 8.073652e-49 | 3.878202e-46 |
| MsG0780040553.01 | MsG0880043989.01 | 0.804038 | 2.617356e-49 | 1.335740e-46 |
| MsG0780040878.01 | MsG0880043989.01 | 0.812057 | 5.133192e-51 | 3.230209e-48 |
| MsG0780041079.01 | MsG0880043989.01 | 0.802143 | 6.451711e-49 | 3.136693e-46 |
| MsG0780041180.01 | MsG0880043989.01 | 0.842795 | 2.078772e-58 | 3.186981e-55 |
| MsG0780041363.01 | MsG0880043989.01 | 0.841422 | 4.799442e-58 | 7.049002e-55 |
| MsG0780041531.01 | MsG0880043989.01 | -0.813532 | 2.440009e-51 | 1.597590e-48 |
| MsG0880042122.01 | MsG0880043989.01 | 0.829335 | 5.452241e-55 | 5.564212e-52 |
| MsG0880042433.01 | MsG0880043989.01 | 0.801547 | 8.553704e-49 | 4.096070e-46 |
| MsG0880042644.01 | MsG0880043989.01 | 0.801061 | 1.075442e-48 | 5.087576e-46 |
| MsG0880042846.01 | MsG0880043989.01 | 0.800701 | 1.273563e-48 | 5.969633e-46 |
| MsG0880042930.01 | MsG0880043989.01 | 0.802750 | 4.837919e-49 | 2.388836e-46 |
| MsG0880043261.01 | MsG0880043989.01 | 0.889092 | 3.301087e-73 | 2.625988e-69 |
| MsG0880043551.01 | MsG0880043989.01 | 0.860668 | 1.758800e-63 | 4.846148e-60 |
| MsG0280010950.01 | MsG0880043989.01 | 0.811859 | 5.669653e-51 | 3.548779e-48 |
| MsG0280011267.01 | MsG0880043989.01 | 0.814507 | 1.487584e-51 | 1.000076e-48 |
| MsG0380013118.01 | MsG0880043989.01 | 0.807381 | 5.197908e-50 | 2.890884e-47 |
| MsG0380013415.01 | MsG0880043989.01 | 0.801446 | 8.970736e-49 | 4.284970e-46 |
| MsG0380014410.01 | MsG0880043989.01 | 0.804925 | 1.709469e-49 | 8.926207e-47 |
| MsG0380014734.01 | MsG0880043989.01 | 0.812309 | 4.524711e-51 | 2.866926e-48 |
| MsG0380014735.01 | MsG0880043989.01 | -0.811399 | 7.138358e-51 | 4.414312e-48 |
| MsG0680031178.01 | MsG0880043989.01 | 0.879480 | 1.203677e-69 | 6.536304e-66 |
| MsG0680031841.01 | MsG0880043989.01 | 0.824643 | 7.223344e-54 | 6.436732e-51 |
| MsG0680034733.01 | MsG0880043989.01 | 0.800518 | 1.388389e-48 | 6.477781e-46 |
| MsG0480019588.01 | MsG0880043989.01 | 0.800786 | 1.224128e-48 | 5.750167e-46 |
| MsG0480020345.01 | MsG0880043989.01 | 0.810448 | 1.146901e-50 | 6.915085e-48 |
| MsG0480020722.01 | MsG0880043989.01 | 0.824082 | 9.788292e-54 | 8.582427e-51 |
| MsG0480020814.01 | MsG0880043989.01 | 0.800292 | 1.543375e-48 | 7.160022e-46 |
| MsG0480020957.01 | MsG0880043989.01 | 0.806563 | 7.740543e-50 | 4.214821e-47 |
| MsG0480021931.01 | MsG0880043989.01 | 0.825171 | 5.422476e-54 | 4.905340e-51 |
| MsG0480022167.01 | MsG0880043989.01 | 0.844903 | 5.665391e-59 | 9.281143e-56 |
| MsG0480022407.01 | MsG0880043989.01 | 0.806844 | 6.752021e-50 | 3.703329e-47 |
| MsG0480022428.01 | MsG0880043989.01 | 0.823769 | 1.158711e-53 | 1.007203e-50 |
| MsG0480023195.01 | MsG0880043989.01 | 0.900968 | 4.305924e-78 | 5.692669e-74 |
| MsG0480023322.01 | MsG0880043989.01 | 0.840535 | 8.203088e-58 | 1.171952e-54 |
| MsG0480023324.01 | MsG0880043989.01 | 0.819894 | 9.136030e-53 | 7.120766e-50 |
| MsG0580024260.01 | MsG0880043989.01 | 0.809348 | 1.978004e-50 | 1.158619e-47 |
| MsG0580025117.01 | MsG0880043989.01 | 0.844408 | 7.703801e-59 | 1.242478e-55 |
| MsG0580025153.01 | MsG0880043989.01 | -0.800447 | 1.435437e-48 | 6.685177e-46 |
| MsG0580025822.01 | MsG0880043989.01 | 0.848058 | 7.807624e-60 | 1.415152e-56 |
| MsG0380016112.01 | MsG0880043989.01 | 0.809702 | 1.660431e-50 | 9.817676e-48 |
| MsG0380016476.01 | MsG0880043989.01 | 0.838219 | 3.275482e-57 | 4.357546e-54 |
| MsG0380016524.01 | MsG0880043989.01 | 0.850301 | 1.855764e-60 | 3.618756e-57 |
| MsG0380016649.01 | MsG0880043989.01 | 0.809261 | 2.064603e-50 | 1.206516e-47 |
| MsG0380017102.01 | MsG0880043989.01 | 0.849158 | 3.869756e-60 | 7.271488e-57 |
| MsG0380017231.01 | MsG0880043989.01 | 0.878045 | 3.857331e-69 | 1.983856e-65 |
| MsG0380017730.01 | MsG0880043989.01 | 0.806946 | 6.424846e-50 | 3.533039e-47 |
| MsG0380017858.01 | MsG0880043989.01 | 0.812945 | 3.283939e-51 | 2.115973e-48 |
| MsG0380017992.01 | MsG0880043989.01 | 0.805448 | 1.328175e-49 | 7.028660e-47 |
| MsG0380018007.01 | MsG0880043989.01 | 0.808734 | 2.677926e-50 | 1.542941e-47 |
| MsG0580027036.01 | MsG0880043989.01 | 0.838037 | 3.647452e-57 | 4.826348e-54 |
| MsG0580027641.01 | MsG0880043989.01 | 0.808626 | 2.824058e-50 | 1.622579e-47 |
| MsG0580028023.01 | MsG0880043989.01 | 0.853432 | 2.399793e-61 | 5.184557e-58 |
| MsG0580028565.01 | MsG0880043989.01 | 0.818496 | 1.901630e-52 | 1.425739e-49 |
| MsG0580028924.01 | MsG0880043989.01 | 0.825442 | 4.677552e-54 | 4.263696e-51 |
| MsG0580029792.01 | MsG0880043989.01 | -0.829883 | 4.011703e-55 | 4.159929e-52 |
| MsG0680030315.01 | MsG0880043989.01 | 0.819713 | 1.005087e-52 | 7.794141e-50 |
| MsG0280006485.01 | MsG0880043989.01 | 0.849487 | 3.133428e-60 | 5.949340e-57 |
| MsG0280006884.01 | MsG0880043989.01 | 0.828261 | 9.920235e-55 | 9.809055e-52 |
| MsG0280007686.01 | MsG0880043989.01 | 0.838750 | 2.388825e-57 | 3.230024e-54 |
| MsG0280007786.01 | MsG0880043989.01 | 0.811239 | 7.732759e-51 | 4.761542e-48 |
| MsG0280007844.01 | MsG0880043989.01 | 0.810849 | 9.392158e-51 | 5.724200e-48 |
| MsG0280008328.01 | MsG0880043989.01 | 0.809322 | 2.003437e-50 | 1.172679e-47 |
| MsG0280008407.01 | MsG0880043989.01 | 0.807730 | 4.383176e-50 | 2.460003e-47 |
| MsG0280008495.01 | MsG0880043989.01 | 0.809267 | 2.058890e-50 | 1.203349e-47 |
| MsG0280008553.01 | MsG0880043989.01 | 0.852133 | 5.637836e-61 | 1.166663e-57 |
| MsG0280008820.01 | MsG0880043989.01 | -0.846696 | 1.846656e-59 | 3.205407e-56 |
| MsG0280009241.01 | MsG0880043989.01 | 0.859736 | 3.366022e-63 | 8.981071e-60 |
| MsG0280009416.01 | MsG0880043989.01 | 0.821023 | 5.032800e-53 | 4.047916e-50 |
| MsG0280010296.01 | MsG0880043989.01 | 0.852689 | 3.915159e-61 | 8.247573e-58 |
| MsG0280010303.01 | MsG0880043989.01 | 0.810701 | 1.011280e-50 | 6.138916e-48 |
| MsG0280010463.01 | MsG0880043989.01 | 0.804883 | 1.743978e-49 | 9.096901e-47 |
| MsG0780037094.01 | MsG0880043989.01 | 0.816583 | 5.131671e-52 | 3.650622e-49 |
| MsG0780037232.01 | MsG0880043989.01 | 0.817198 | 3.733570e-52 | 2.701149e-49 |
| MsG0780037751.01 | MsG0880043989.01 | 0.835394 | 1.721603e-56 | 2.102581e-53 |
| MsG0780038305.01 | MsG0880043989.01 | 0.823573 | 1.287873e-53 | 1.113133e-50 |
| MsG0780038810.01 | MsG0880043989.01 | 0.834159 | 3.520478e-56 | 4.142616e-53 |
| MsG0780038983.01 | MsG0880043989.01 | 0.802876 | 4.555670e-49 | 2.256647e-46 |
| MsG0780038985.01 | MsG0880043989.01 | 0.805852 | 1.092704e-49 | 5.843180e-47 |
| MsG0780039190.01 | MsG0880043989.01 | 0.802499 | 5.451189e-49 | 2.674344e-46 |
| MsG0780039916.01 | MsG0880043989.01 | 0.831120 | 1.998504e-55 | 2.148271e-52 |
| MsG0780039917.01 | MsG0880043989.01 | 0.812622 | 3.864253e-51 | 2.468932e-48 |
| MsG0780039918.01 | MsG0880043989.01 | 0.812799 | 3.535318e-51 | 2.269049e-48 |
| MsG0780040021.01 | MsG0880043989.01 | 0.800456 | 1.429005e-48 | 6.656801e-46 |
| MsG0780040022.01 | MsG0880043989.01 | 0.804308 | 2.298995e-49 | 1.181417e-46 |
| MsG0780040118.01 | MsG0880043989.01 | 0.812666 | 3.779957e-51 | 2.417823e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043989.01.T01 | MTR_8g045695 | 96.795 | 156 | 5 | 0 | 1 | 156 | 1 | 156 | 1.58e-111 | 313 |
| MsG0880043989.01.T01 | MTR_8g045735 | 88.961 | 154 | 17 | 0 | 1 | 154 | 1 | 154 | 4.93e-102 | 289 |
| MsG0880043989.01.T01 | MTR_8g045665 | 87.821 | 156 | 19 | 0 | 1 | 156 | 1 | 156 | 2.05e-100 | 285 |
| MsG0880043989.01.T01 | MTR_8g045640 | 83.974 | 156 | 25 | 0 | 1 | 156 | 1 | 156 | 2.23e-96 | 275 |
| MsG0880043989.01.T01 | MTR_8g045560 | 83.333 | 156 | 26 | 0 | 1 | 156 | 1 | 156 | 4.65e-95 | 271 |
| MsG0880043989.01.T01 | MTR_8g045520 | 78.344 | 157 | 33 | 1 | 1 | 156 | 1 | 157 | 6.07e-89 | 256 |
| MsG0880043989.01.T01 | MTR_8g045490 | 74.522 | 157 | 38 | 2 | 1 | 156 | 1 | 156 | 4.98e-85 | 246 |
| MsG0880043989.01.T01 | MTR_8g045400 | 72.611 | 157 | 41 | 2 | 1 | 156 | 1 | 156 | 1.37e-82 | 240 |
| MsG0880043989.01.T01 | MTR_8g045570 | 71.711 | 152 | 42 | 1 | 1 | 151 | 1 | 152 | 6.32e-81 | 236 |
| MsG0880043989.01.T01 | MTR_8g045555 | 70.395 | 152 | 44 | 1 | 1 | 151 | 1 | 152 | 3.10e-79 | 231 |
| MsG0880043989.01.T01 | MTR_8g045300 | 67.308 | 156 | 50 | 1 | 1 | 155 | 1 | 156 | 3.69e-78 | 229 |
| MsG0880043989.01.T01 | MTR_1g030810 | 43.137 | 153 | 83 | 3 | 1 | 150 | 1 | 152 | 1.27e-39 | 131 |
| MsG0880043989.01.T01 | MTR_1g030820 | 38.562 | 153 | 90 | 3 | 1 | 150 | 1 | 152 | 1.16e-37 | 126 |
| MsG0880043989.01.T01 | MTR_1g030840 | 38.462 | 156 | 87 | 5 | 1 | 148 | 1 | 155 | 5.64e-29 | 104 |
| MsG0880043989.01.T01 | MTR_8g012550 | 34.000 | 150 | 95 | 4 | 6 | 153 | 8 | 155 | 1.08e-26 | 98.6 |
| MsG0880043989.01.T01 | MTR_1g031640 | 38.514 | 148 | 81 | 6 | 7 | 151 | 7 | 147 | 1.22e-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043989.01.T01 | AT5G28010 | 35.948 | 153 | 94 | 4 | 3 | 152 | 15 | 166 | 1.38e-25 | 96.3 |
| MsG0880043989.01.T01 | AT5G28010 | 35.948 | 153 | 94 | 4 | 3 | 152 | 15 | 166 | 1.38e-25 | 96.3 |
| MsG0880043989.01.T01 | AT1G70840 | 35.294 | 153 | 95 | 4 | 3 | 152 | 20 | 171 | 2.03e-24 | 93.2 |
| MsG0880043989.01.T01 | AT1G70890 | 35.948 | 153 | 94 | 4 | 3 | 152 | 7 | 158 | 6.00e-24 | 91.7 |
| MsG0880043989.01.T01 | AT1G70830 | 35.948 | 153 | 94 | 4 | 3 | 152 | 22 | 173 | 1.75e-23 | 90.9 |
| MsG0880043989.01.T01 | AT1G70830 | 35.714 | 154 | 95 | 4 | 3 | 153 | 22 | 174 | 2.43e-23 | 91.3 |
| MsG0880043989.01.T01 | AT1G70830 | 35.714 | 154 | 95 | 4 | 3 | 153 | 22 | 174 | 1.13e-22 | 90.5 |
| MsG0880043989.01.T01 | AT5G28000 | 33.333 | 153 | 98 | 4 | 3 | 152 | 13 | 164 | 1.22e-22 | 88.6 |
| MsG0880043989.01.T01 | AT1G70830 | 35.948 | 153 | 94 | 4 | 3 | 152 | 137 | 288 | 1.98e-22 | 90.9 |
| MsG0880043989.01.T01 | AT1G70830 | 32.990 | 97 | 63 | 2 | 59 | 153 | 31 | 127 | 3.76e-11 | 60.1 |
| MsG0880043989.01.T01 | AT1G70830 | 35.714 | 154 | 95 | 4 | 3 | 153 | 22 | 174 | 2.40e-22 | 91.3 |
| MsG0880043989.01.T01 | AT1G70830 | 35.948 | 153 | 94 | 4 | 3 | 152 | 184 | 335 | 5.93e-22 | 90.1 |
| MsG0880043989.01.T01 | AT1G70850 | 34.667 | 150 | 94 | 4 | 3 | 149 | 9 | 157 | 1.97e-21 | 87.0 |
| MsG0880043989.01.T01 | AT1G70850 | 36.364 | 143 | 87 | 4 | 13 | 152 | 175 | 316 | 3.64e-21 | 87.8 |
| MsG0880043989.01.T01 | AT1G70850 | 34.667 | 150 | 94 | 4 | 3 | 149 | 9 | 157 | 5.05e-21 | 87.4 |
| MsG0880043989.01.T01 | AT1G70850 | 36.364 | 143 | 87 | 4 | 13 | 152 | 175 | 316 | 3.64e-21 | 87.8 |
| MsG0880043989.01.T01 | AT1G70850 | 34.667 | 150 | 94 | 4 | 3 | 149 | 9 | 157 | 5.05e-21 | 87.4 |
| MsG0880043989.01.T01 | AT4G23670 | 33.333 | 153 | 98 | 4 | 1 | 151 | 1 | 151 | 6.29e-21 | 83.6 |
| MsG0880043989.01.T01 | AT1G14930 | 29.936 | 157 | 106 | 4 | 1 | 155 | 1 | 155 | 8.25e-20 | 80.9 |
| MsG0880043989.01.T01 | AT2G01520 | 30.065 | 153 | 103 | 4 | 1 | 151 | 1 | 151 | 2.99e-19 | 79.3 |
| MsG0880043989.01.T01 | AT1G70870 | 41.667 | 96 | 54 | 2 | 56 | 150 | 44 | 138 | 1.71e-18 | 77.0 |
| MsG0880043989.01.T01 | AT1G70880 | 30.065 | 153 | 103 | 4 | 3 | 152 | 8 | 159 | 1.61e-17 | 75.1 |
| MsG0880043989.01.T01 | AT1G14940 | 29.299 | 157 | 107 | 4 | 1 | 155 | 1 | 155 | 2.11e-17 | 74.7 |
| MsG0880043989.01.T01 | AT2G01530 | 30.065 | 153 | 103 | 4 | 1 | 151 | 1 | 151 | 3.86e-17 | 73.9 |
| MsG0880043989.01.T01 | AT4G14060 | 29.412 | 153 | 104 | 4 | 1 | 151 | 1 | 151 | 6.43e-17 | 73.2 |
| MsG0880043989.01.T01 | AT4G23680 | 29.605 | 152 | 103 | 4 | 1 | 150 | 1 | 150 | 1.11e-16 | 72.8 |
| MsG0880043989.01.T01 | AT1G24020 | 31.613 | 155 | 97 | 4 | 1 | 150 | 1 | 151 | 1.47e-16 | 72.4 |
| MsG0880043989.01.T01 | AT1G24020 | 31.613 | 155 | 97 | 4 | 1 | 150 | 1 | 151 | 1.47e-16 | 72.4 |
| MsG0880043989.01.T01 | AT1G23130 | 28.188 | 149 | 104 | 3 | 3 | 149 | 10 | 157 | 3.16e-16 | 71.6 |
| MsG0880043989.01.T01 | AT1G23120 | 29.333 | 150 | 98 | 5 | 3 | 149 | 1 | 145 | 4.90e-16 | 70.9 |
| MsG0880043989.01.T01 | AT1G14950 | 28.025 | 157 | 109 | 4 | 1 | 155 | 1 | 155 | 5.48e-16 | 70.9 |
| MsG0880043989.01.T01 | AT1G35260 | 29.932 | 147 | 92 | 5 | 9 | 149 | 8 | 149 | 1.25e-15 | 70.1 |
| MsG0880043989.01.T01 | AT1G23120 | 28.369 | 141 | 95 | 4 | 10 | 149 | 60 | 195 | 1.41e-15 | 70.9 |
| MsG0880043989.01.T01 | AT1G30990 | 28.477 | 151 | 103 | 5 | 1 | 149 | 1 | 148 | 5.33e-14 | 65.9 |
| MsG0880043989.01.T01 | AT1G14960 | 27.097 | 155 | 109 | 4 | 1 | 153 | 1 | 153 | 2.51e-13 | 63.9 |
| MsG0880043989.01.T01 | AT3G26460 | 27.451 | 153 | 108 | 3 | 1 | 151 | 1 | 152 | 7.59e-13 | 62.8 |
| MsG0880043989.01.T01 | AT1G35310 | 26.619 | 139 | 98 | 4 | 13 | 149 | 12 | 148 | 9.66e-12 | 59.7 |
| MsG0880043989.01.T01 | AT3G26450 | 25.325 | 154 | 110 | 5 | 1 | 151 | 1 | 152 | 1.39e-11 | 59.3 |
Find 27 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCACATACAAGCTATT+TGG | 0.273919 | 8:-33893434 | MsG0880043989.01.T01:CDS |
| TGGAGATATTGAAAACTATA+AGG | 0.391039 | 8:-33893411 | MsG0880043989.01.T01:CDS |
| ATGGAAATTCTGCTGTTAGA+TGG | 0.411619 | 8:-33893352 | MsG0880043989.01.T01:CDS |
| GGTAAACTTATTACTGAACT+TGG | 0.415223 | 8:-33894984 | MsG0880043989.01.T01:CDS |
| AAACACTGGACTTATGTCAT+AGG | 0.470664 | 8:-33894831 | MsG0880043989.01.T01:intron |
| AGGTAGTCCATCCATCCATT+TGG | 0.478602 | 8:+33893290 | None:intergenic |
| AGCTTCATGAGGGTGAAGAT+TGG | 0.493681 | 8:-33894872 | MsG0880043989.01.T01:CDS |
| TCATCTTGTCAAAGGGGAAA+AGG | 0.504175 | 8:-33893240 | MsG0880043989.01.T01:CDS |
| AGATTGGCATCATACTGATT+CGG | 0.504369 | 8:-33894856 | MsG0880043989.01.T01:CDS |
| AAGAGCACTAGAGATATTGA+TGG | 0.505384 | 8:-33893263 | MsG0880043989.01.T01:CDS |
| TTGATGGTCATCTTGTCAAA+GGG | 0.506740 | 8:-33893247 | MsG0880043989.01.T01:CDS |
| ATCTTCACCCTCATGAAGCT+TGG | 0.519812 | 8:+33894875 | None:intergenic |
| ATCACATACAAGCTATTTGG+TGG | 0.530005 | 8:-33893431 | MsG0880043989.01.T01:CDS |
| GTAAACTTATTACTGAACTT+GGG | 0.542207 | 8:-33894983 | MsG0880043989.01.T01:CDS |
| ATTGATGGTCATCTTGTCAA+AGG | 0.543582 | 8:-33893248 | MsG0880043989.01.T01:CDS |
| GAGGATGTTGATACTCCAAA+TGG | 0.546873 | 8:-33893305 | MsG0880043989.01.T01:CDS |
| TATCTCTAGTGCTCTTGCTA+AGG | 0.569595 | 8:+33893270 | None:intergenic |
| GAAGTGCTTAACAAGGCTGA+TGG | 0.573383 | 8:-33893371 | MsG0880043989.01.T01:CDS |
| TGATACTCCAAATGGATGGA+TGG | 0.602025 | 8:-33893297 | MsG0880043989.01.T01:CDS |
| ATACTGATTCGGTTAAACAC+TGG | 0.606046 | 8:-33894845 | MsG0880043989.01.T01:CDS |
| TCATCATACCAAGCTTCATG+AGG | 0.610699 | 8:-33894883 | MsG0880043989.01.T01:CDS |
| ATGTTGATACTCCAAATGGA+TGG | 0.627228 | 8:-33893301 | MsG0880043989.01.T01:CDS |
| CATCATACCAAGCTTCATGA+GGG | 0.642119 | 8:-33894882 | MsG0880043989.01.T01:CDS |
| CATCTTAGAAGTGCTTAACA+AGG | 0.644958 | 8:-33893378 | MsG0880043989.01.T01:CDS |
| TGATGGTCATCTTGTCAAAG+GGG | 0.652198 | 8:-33893246 | MsG0880043989.01.T01:CDS |
| TGACATAACAACAGATGGCG+AGG | 0.663434 | 8:-33893504 | MsG0880043989.01.T01:intron |
| TGATTATGAGAAGAACAATG+AGG | 0.694185 | 8:-33893324 | MsG0880043989.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAAAAAAATGTGAAA+GGG | - | Chr8:33894340-33894359 | MsG0880043989.01.T01:intron | 10.0% |
| !!! | CTATTATTACATTATTTTTT+TGG | + | Chr8:33894197-33894216 | None:intergenic | 10.0% |
| !! | ACTCTTAATCAAAAAAATAT+TGG | + | Chr8:33893787-33893806 | None:intergenic | 15.0% |
| !! | CAATTATAAATTAAGTCAAT+AGG | + | Chr8:33893621-33893640 | None:intergenic | 15.0% |
| !! | GAATAATATATATTATGAGT+GGG | + | Chr8:33893833-33893852 | None:intergenic | 15.0% |
| !! | TATAGTAATAAAAAGAAGAT+TGG | - | Chr8:33893507-33893526 | MsG0880043989.01.T01:intron | 15.0% |
| !! | TGAATAATATATATTATGAG+TGG | + | Chr8:33893834-33893853 | None:intergenic | 15.0% |
| !!! | CATTTTTAAAAAAATGTGAA+AGG | - | Chr8:33894339-33894358 | MsG0880043989.01.T01:intron | 15.0% |
| !!! | GGATTTATATTTTGTTTTTT+AGG | - | Chr8:33894250-33894269 | MsG0880043989.01.T01:intron | 15.0% |
| !!! | GTTTTCTATTACAAATTTTT+TGG | - | Chr8:33893476-33893495 | MsG0880043989.01.T01:CDS | 15.0% |
| !!! | TTACATTATTTTTTTGGAAT+CGG | + | Chr8:33894191-33894210 | None:intergenic | 15.0% |
| !! | CTAGAGATAATTAAAAAGTA+GGG | - | Chr8:33893988-33894007 | MsG0880043989.01.T01:intron | 20.0% |
| !! | TCTAGAGATAATTAAAAAGT+AGG | - | Chr8:33893987-33894006 | MsG0880043989.01.T01:intron | 20.0% |
| !! | TCTTCGTTATATAATTCATT+TGG | + | Chr8:33893547-33893566 | None:intergenic | 20.0% |
| !! | TTTATTTAAAGATCTAAGGA+TGG | + | Chr8:33894373-33894392 | None:intergenic | 20.0% |
| !!! | ATTGCCTTTTTTTTTTTTTG+TGG | + | Chr8:33894549-33894568 | None:intergenic | 20.0% |
| !!! | CAATAAAATACGTTTTTCAA+AGG | + | Chr8:33894681-33894700 | None:intergenic | 20.0% |
| !!! | TATGTATTTGATTTATGCTT+AGG | - | Chr8:33894040-33894059 | MsG0880043989.01.T01:intron | 20.0% |
| !!! | TTTTGTTTTTTAGGATACAA+AGG | - | Chr8:33894259-33894278 | MsG0880043989.01.T01:intron | 20.0% |
| ! | AAAAAATTATACTCGTACCA+AGG | + | Chr8:33893933-33893952 | None:intergenic | 25.0% |
| ! | AAAATCACATACAAGCTATT+TGG | - | Chr8:33894791-33894810 | MsG0880043989.01.T01:intron | 25.0% |
| ! | ACCACCACAAAAAAAAAAAA+AGG | - | Chr8:33894542-33894561 | MsG0880043989.01.T01:intron | 25.0% |
| ! | GTAAACTTATTACTGAACTT+GGG | - | Chr8:33893242-33893261 | MsG0880043989.01.T01:CDS | 25.0% |
| ! | TGGAGATATTGAAAACTATA+AGG | - | Chr8:33894814-33894833 | MsG0880043989.01.T01:intron | 25.0% |
| !! | TCATTTTACAACAGTAATGT+GGG | - | Chr8:33894229-33894248 | MsG0880043989.01.T01:intron | 25.0% |
| !!! | ATCTTTAAACAGTGTTTTAG+AGG | - | Chr8:33894438-33894457 | MsG0880043989.01.T01:intron | 25.0% |
| !!! | GTGCTTTATTTAAAGATCTA+AGG | + | Chr8:33894377-33894396 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTGTGGTGGT+CGG | + | Chr8:33894542-33894561 | None:intergenic | 25.0% |
| AAAGCAACAAATGACCTTAA+AGG | - | Chr8:33893875-33893894 | MsG0880043989.01.T01:intron | 30.0% | |
| AAAGTAGGGTTTGCATAATA+TGG | - | Chr8:33894002-33894021 | MsG0880043989.01.T01:intron | 30.0% | |
| AAGTAGGGTTTGCATAATAT+GGG | - | Chr8:33894003-33894022 | MsG0880043989.01.T01:intron | 30.0% | |
| AGCCATGAAATTACAAATCA+TGG | + | Chr8:33894116-33894135 | None:intergenic | 30.0% | |
| AGTAGCATTTCTTTCCTTTA+AGG | + | Chr8:33893892-33893911 | None:intergenic | 30.0% | |
| GGTAAACTTATTACTGAACT+TGG | - | Chr8:33893241-33893260 | MsG0880043989.01.T01:CDS | 30.0% | |
| TAATTTCATGGCTCTTTCTT+GGG | - | Chr8:33894123-33894142 | MsG0880043989.01.T01:intron | 30.0% | |
| TGATTATGAGAAGAACAATG+AGG | - | Chr8:33894901-33894920 | MsG0880043989.01.T01:CDS | 30.0% | |
| TTATCTCTAGACAAAAACTC+TGG | + | Chr8:33893978-33893997 | None:intergenic | 30.0% | |
| ! | TGCCATGATTTGTAATTTCA+TGG | - | Chr8:33894111-33894130 | MsG0880043989.01.T01:intron | 30.0% |
| !! | GTCATTTTACAACAGTAATG+TGG | - | Chr8:33894228-33894247 | MsG0880043989.01.T01:intron | 30.0% |
| !!! | GCCTTTTTTTTTTTTTGTGG+TGG | + | Chr8:33894546-33894565 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTGTGGTGGTC+GGG | + | Chr8:33894541-33894560 | None:intergenic | 30.0% |
| AAACACTGGACTTATGTCAT+AGG | - | Chr8:33893394-33893413 | MsG0880043989.01.T01:CDS | 35.0% | |
| AAATGCTACTCAACCATCTT+TGG | - | Chr8:33893902-33893921 | MsG0880043989.01.T01:intron | 35.0% | |
| ATCACATACAAGCTATTTGG+TGG | - | Chr8:33894794-33894813 | MsG0880043989.01.T01:intron | 35.0% | |
| ATGGAAATTCTGCTGTTAGA+TGG | - | Chr8:33894873-33894892 | MsG0880043989.01.T01:CDS | 35.0% | |
| ATGTTGATACTCCAAATGGA+TGG | - | Chr8:33894924-33894943 | MsG0880043989.01.T01:CDS | 35.0% | |
| GTAATTTCATGGCTCTTTCT+TGG | - | Chr8:33894122-33894141 | MsG0880043989.01.T01:intron | 35.0% | |
| TGATTTATGCTTAGGAGTTC+AGG | - | Chr8:33894048-33894067 | MsG0880043989.01.T01:intron | 35.0% | |
| ! | AGATTGGCATCATACTGATT+CGG | - | Chr8:33893369-33893388 | MsG0880043989.01.T01:CDS | 35.0% |
| ! | AGTTTGTAGAACTTTTCAGC+TGG | + | Chr8:33893277-33893296 | None:intergenic | 35.0% |
| ! | ATTGATGGTCATCTTGTCAA+AGG | - | Chr8:33894977-33894996 | MsG0880043989.01.T01:CDS | 35.0% |
| ! | TTGATGGTCATCTTGTCAAA+GGG | - | Chr8:33894978-33894997 | MsG0880043989.01.T01:CDS | 35.0% |
| !! | AAGAGCACTAGAGATATTGA+TGG | - | Chr8:33894962-33894981 | MsG0880043989.01.T01:CDS | 35.0% |
| !! | ATACTGATTCGGTTAAACAC+TGG | - | Chr8:33893380-33893399 | MsG0880043989.01.T01:CDS | 35.0% |
| !! | CATCTTAGAAGTGCTTAACA+AGG | - | Chr8:33894847-33894866 | MsG0880043989.01.T01:CDS | 35.0% |
| AACCATCTTTGGATTCACCT+TGG | - | Chr8:33893913-33893932 | MsG0880043989.01.T01:intron | 40.0% | |
| CATCATACCAAGCTTCATGA+GGG | - | Chr8:33893343-33893362 | MsG0880043989.01.T01:CDS | 40.0% | |
| GAGGATGTTGATACTCCAAA+TGG | - | Chr8:33894920-33894939 | MsG0880043989.01.T01:CDS | 40.0% | |
| GATGTCGAAATCATTGCACT+AGG | - | Chr8:33893722-33893741 | MsG0880043989.01.T01:intron | 40.0% | |
| TACCAAGGTGAATCCAAAGA+TGG | + | Chr8:33893918-33893937 | None:intergenic | 40.0% | |
| TATCTCTAGTGCTCTTGCTA+AGG | + | Chr8:33894958-33894977 | None:intergenic | 40.0% | |
| TCATCATACCAAGCTTCATG+AGG | - | Chr8:33893342-33893361 | MsG0880043989.01.T01:CDS | 40.0% | |
| TCATCTTGTCAAAGGGGAAA+AGG | - | Chr8:33894985-33895004 | MsG0880043989.01.T01:CDS | 40.0% | |
| TGATACTCCAAATGGATGGA+TGG | - | Chr8:33894928-33894947 | MsG0880043989.01.T01:CDS | 40.0% | |
| TGATGGTCATCTTGTCAAAG+GGG | - | Chr8:33894979-33894998 | MsG0880043989.01.T01:CDS | 40.0% | |
| AGCTTCATGAGGGTGAAGAT+TGG | - | Chr8:33893353-33893372 | MsG0880043989.01.T01:CDS | 45.0% | |
| AGGTAGTCCATCCATCCATT+TGG | + | Chr8:33894938-33894957 | None:intergenic | 45.0% | |
| ATCTTCACCCTCATGAAGCT+TGG | + | Chr8:33893353-33893372 | None:intergenic | 45.0% | |
| CTTGGGTGCAATGTATGCTT+GGG | - | Chr8:33894140-33894159 | MsG0880043989.01.T01:intron | 45.0% | |
| GCCATCTGTTGTTATGTCAG+AGG | + | Chr8:33894720-33894739 | None:intergenic | 45.0% | |
| GCCTCTGACATAACAACAGA+TGG | - | Chr8:33894716-33894735 | MsG0880043989.01.T01:intron | 45.0% | |
| TCTTGGGTGCAATGTATGCT+TGG | - | Chr8:33894139-33894158 | MsG0880043989.01.T01:intron | 45.0% | |
| TGACATAACAACAGATGGCG+AGG | - | Chr8:33894721-33894740 | MsG0880043989.01.T01:intron | 45.0% | |
| ! | GAAGTGCTTAACAAGGCTGA+TGG | - | Chr8:33894854-33894873 | MsG0880043989.01.T01:CDS | 45.0% |
| ! | TGTGCTTAGCTCAGTTGGTA+TGG | - | Chr8:33894480-33894499 | MsG0880043989.01.T01:intron | 45.0% |
| !! | AATATATAAGATTATAATAA+AGG | + | Chr8:33894618-33894637 | None:intergenic | 5.0% |
| !!! | GTATTATATATTTTTTTAAT+GGG | - | Chr8:33894580-33894599 | MsG0880043989.01.T01:intron | 5.0% |
| !!! | TAATTTATAATTGTTTTAAT+TGG | - | Chr8:33893628-33893647 | MsG0880043989.01.T01:intron | 5.0% |
| !!! | TATTATATATTTTTTTAATG+GGG | - | Chr8:33894581-33894600 | MsG0880043989.01.T01:intron | 5.0% |
| !!! | TGTATTATATATTTTTTTAA+TGG | - | Chr8:33894579-33894598 | MsG0880043989.01.T01:intron | 5.0% |
| !!! | TTATATATTATAATATTTTC+TGG | - | Chr8:33894629-33894648 | MsG0880043989.01.T01:intron | 5.0% |
| TGGTGGTCGGGATTTGAACT+CGG | + | Chr8:33894529-33894548 | None:intergenic | 50.0% | |
| CCAACTGAGCTAAGCACACG+AGG | + | Chr8:33894478-33894497 | None:intergenic | 55.0% | |
| CCTCGTGTGCTTAGCTCAGT+TGG | - | Chr8:33894475-33894494 | MsG0880043989.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 33893229 | 33895018 | 33893229 | ID=MsG0880043989.01;Name=MsG0880043989.01 |
| Chr8 | mRNA | 33893229 | 33895018 | 33893229 | ID=MsG0880043989.01.T01;Parent=MsG0880043989.01;Name=MsG0880043989.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|1|1|2|0|156 |
| Chr8 | exon | 33894832 | 33895018 | 33894832 | ID=MsG0880043989.01.T01:exon:10309;Parent=MsG0880043989.01.T01 |
| Chr8 | exon | 33893229 | 33893512 | 33893229 | ID=MsG0880043989.01.T01:exon:10308;Parent=MsG0880043989.01.T01 |
| Chr8 | CDS | 33894832 | 33895018 | 33894832 | ID=MsG0880043989.01.T01:cds;Parent=MsG0880043989.01.T01 |
| Chr8 | CDS | 33893229 | 33893512 | 33893229 | ID=MsG0880043989.01.T01:cds;Parent=MsG0880043989.01.T01 |
| Gene Sequence |
| Protein sequence |
