Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041363.01.T01 | XP_003625972.1 | 95.385 | 325 | 10 | 1 | 1 | 325 | 1 | 320 | 0 | 641 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041363.01.T01 | Q9LZQ1 | 55.758 | 330 | 132 | 6 | 1 | 325 | 1 | 321 | 3.92E-122 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041363.01.T01 | G7KST9 | 95.385 | 325 | 10 | 1 | 1 | 325 | 1 | 320 | 0.0 | 641 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048842.01 | MsG0780041363.01 | -0.800463 | 1.424140e-48 | 6.635258e-46 |
| MsG0080048948.01 | MsG0780041363.01 | -0.800274 | 1.556612e-48 | 7.217809e-46 |
| MsG0180000076.01 | MsG0780041363.01 | 0.858266 | 9.270359e-63 | 2.352198e-59 |
| MsG0180000360.01 | MsG0780041363.01 | 0.833092 | 6.504254e-56 | 7.413953e-53 |
| MsG0180001272.01 | MsG0780041363.01 | 0.821375 | 4.176008e-53 | 3.391344e-50 |
| MsG0180002984.01 | MsG0780041363.01 | 0.823839 | 1.116034e-53 | 9.719342e-51 |
| MsG0180004027.01 | MsG0780041363.01 | 0.881619 | 2.064688e-70 | 1.218198e-66 |
| MsG0180004126.01 | MsG0780041363.01 | 0.845754 | 3.333434e-59 | 5.612781e-56 |
| MsG0180004510.01 | MsG0780041363.01 | 0.875894 | 2.149673e-68 | 1.021263e-64 |
| MsG0180004559.01 | MsG0780041363.01 | 0.809073 | 2.265530e-50 | 1.317275e-47 |
| MsG0180005272.01 | MsG0780041363.01 | 0.826915 | 2.087115e-54 | 1.984464e-51 |
| MsG0180005667.01 | MsG0780041363.01 | 0.866958 | 1.947345e-65 | 6.684872e-62 |
| MsG0180006026.01 | MsG0780041363.01 | 0.845698 | 3.451799e-59 | 5.801506e-56 |
| MsG0180006182.01 | MsG0780041363.01 | 0.892366 | 1.696708e-74 | 1.546267e-70 |
| MsG0180006191.01 | MsG0780041363.01 | 0.831006 | 2.131534e-55 | 2.283673e-52 |
| MsG0780040364.01 | MsG0780041363.01 | 0.834320 | 3.208489e-56 | 3.794553e-53 |
| MsG0780040482.01 | MsG0780041363.01 | 0.807039 | 6.140624e-50 | 3.384943e-47 |
| MsG0780040541.01 | MsG0780041363.01 | 0.814735 | 1.324517e-51 | 8.958834e-49 |
| MsG0780040542.01 | MsG0780041363.01 | 0.822244 | 2.626985e-53 | 2.186648e-50 |
| MsG0780040564.01 | MsG0780041363.01 | 0.871963 | 4.576840e-67 | 1.881345e-63 |
| MsG0780041180.01 | MsG0780041363.01 | 0.815523 | 8.851676e-52 | 6.117194e-49 |
| MsG0780041363.01 | MsG0780041548.01 | 0.829351 | 5.405172e-55 | 5.518653e-52 |
| MsG0780041363.01 | MsG0880042541.01 | 0.811065 | 8.436024e-51 | 5.170882e-48 |
| MsG0780041363.01 | MsG0880042846.01 | 0.803892 | 2.806491e-49 | 1.426962e-46 |
| MsG0780041363.01 | MsG0880042927.01 | 0.842926 | 1.918859e-58 | 2.953721e-55 |
| MsG0780041363.01 | MsG0880043297.01 | 0.838796 | 2.323644e-57 | 3.146498e-54 |
| MsG0780041363.01 | MsG0880043961.01 | 0.834957 | 2.218934e-56 | 2.674684e-53 |
| MsG0780041363.01 | MsG0880043983.01 | 0.844119 | 9.207644e-59 | 1.471797e-55 |
| MsG0780041363.01 | MsG0880043989.01 | 0.841422 | 4.799442e-58 | 7.049002e-55 |
| MsG0780041363.01 | MsG0880044803.01 | 0.845483 | 3.947535e-59 | 6.588084e-56 |
| MsG0780041363.01 | MsG0880044984.01 | 0.817548 | 3.114950e-52 | 2.275336e-49 |
| MsG0780041363.01 | MsG0880045852.01 | 0.800618 | 1.324165e-48 | 6.193972e-46 |
| MsG0780041363.01 | MsG0880045963.01 | 0.825546 | 4.419277e-54 | 4.040337e-51 |
| MsG0780041363.01 | MsG0880046165.01 | 0.805656 | 1.201515e-49 | 6.392472e-47 |
| MsG0780041363.01 | MsG0880046337.01 | 0.820396 | 7.011448e-53 | 5.541724e-50 |
| MsG0780041363.01 | MsG0880046983.01 | 0.830087 | 3.576728e-55 | 3.730184e-52 |
| MsG0780041363.01 | MsG0880047226.01 | 0.802397 | 5.719950e-49 | 2.799116e-46 |
| MsG0780041363.01 | MsG0880047466.01 | 0.829518 | 4.923499e-55 | 5.050693e-52 |
| MsG0280011331.01 | MsG0780041363.01 | 0.801331 | 9.468739e-49 | 4.509779e-46 |
| MsG0380013041.01 | MsG0780041363.01 | 0.861570 | 9.353491e-64 | 2.658478e-60 |
| MsG0380014754.01 | MsG0780041363.01 | 0.841758 | 3.912500e-58 | 5.806300e-55 |
| MsG0680031616.01 | MsG0780041363.01 | 0.830787 | 2.412522e-55 | 2.568003e-52 |
| MsG0680031686.01 | MsG0780041363.01 | 0.806467 | 8.110081e-50 | 4.405292e-47 |
| MsG0480018567.01 | MsG0780041363.01 | 0.818172 | 2.251590e-52 | 1.673055e-49 |
| MsG0480018788.01 | MsG0780041363.01 | -0.801982 | 6.964573e-49 | 3.371977e-46 |
| MsG0480018990.01 | MsG0780041363.01 | 0.811261 | 7.647314e-51 | 4.711672e-48 |
| MsG0480019588.01 | MsG0780041363.01 | 0.843126 | 1.697191e-58 | 2.629168e-55 |
| MsG0480019635.01 | MsG0780041363.01 | 0.813397 | 2.612714e-51 | 1.704382e-48 |
| MsG0480020263.01 | MsG0780041363.01 | 0.810674 | 1.024749e-50 | 6.216274e-48 |
| MsG0480021156.01 | MsG0780041363.01 | 0.816145 | 6.430198e-52 | 4.520063e-49 |
| MsG0480021225.01 | MsG0780041363.01 | 0.809877 | 1.522996e-50 | 9.046468e-48 |
| MsG0480021705.01 | MsG0780041363.01 | 0.809888 | 1.514369e-50 | 8.997683e-48 |
| MsG0480021931.01 | MsG0780041363.01 | 0.841330 | 5.074732e-58 | 7.430785e-55 |
| MsG0480021958.01 | MsG0780041363.01 | 0.807287 | 5.440830e-50 | 3.018686e-47 |
| MsG0480022167.01 | MsG0780041363.01 | 0.822527 | 2.258106e-53 | 1.894963e-50 |
| MsG0480022325.01 | MsG0780041363.01 | 0.805738 | 1.154757e-49 | 6.157004e-47 |
| MsG0480022407.01 | MsG0780041363.01 | 0.802596 | 5.205485e-49 | 2.560200e-46 |
| MsG0480023064.01 | MsG0780041363.01 | 0.803578 | 3.259958e-49 | 1.644227e-46 |
| MsG0480023195.01 | MsG0780041363.01 | 0.823509 | 1.333478e-53 | 1.150474e-50 |
| MsG0480023322.01 | MsG0780041363.01 | 0.803250 | 3.813365e-49 | 1.907034e-46 |
| MsG0480023324.01 | MsG0780041363.01 | 0.891005 | 5.890626e-74 | 5.073750e-70 |
| MsG0480023450.01 | MsG0780041363.01 | 0.835430 | 1.686180e-56 | 2.061441e-53 |
| MsG0480023484.01 | MsG0780041363.01 | 0.809116 | 2.218551e-50 | 1.291455e-47 |
| MsG0480023620.01 | MsG0780041363.01 | 0.801936 | 7.116736e-49 | 3.441749e-46 |
| MsG0480023698.01 | MsG0780041363.01 | 0.800203 | 1.608828e-48 | 7.446486e-46 |
| MsG0480023944.01 | MsG0780041363.01 | 0.805033 | 1.622623e-49 | 8.495561e-47 |
| MsG0580024109.01 | MsG0780041363.01 | 0.806531 | 7.861426e-50 | 4.277129e-47 |
| MsG0580024144.01 | MsG0780041363.01 | -0.800958 | 1.128727e-48 | 5.325747e-46 |
| MsG0580024478.01 | MsG0780041363.01 | 0.825452 | 4.651481e-54 | 4.241200e-51 |
| MsG0580025093.01 | MsG0780041363.01 | 0.845965 | 2.922302e-59 | 4.953896e-56 |
| MsG0580025153.01 | MsG0780041363.01 | -0.817824 | 2.698107e-52 | 1.985859e-49 |
| MsG0580025352.01 | MsG0780041363.01 | 0.811879 | 5.614788e-51 | 3.516248e-48 |
| MsG0580025385.01 | MsG0780041363.01 | 0.852830 | 3.567495e-61 | 7.552099e-58 |
| MsG0580025464.01 | MsG0780041363.01 | 0.822377 | 2.447945e-53 | 2.045513e-50 |
| MsG0580025822.01 | MsG0780041363.01 | 0.858921 | 5.909364e-63 | 1.533251e-59 |
| MsG0380015871.01 | MsG0780041363.01 | 0.808845 | 2.534652e-50 | 1.464753e-47 |
| MsG0380016110.01 | MsG0780041363.01 | 0.802290 | 6.017163e-49 | 2.936517e-46 |
| MsG0380016112.01 | MsG0780041363.01 | 0.808478 | 3.037137e-50 | 1.738421e-47 |
| MsG0380016196.01 | MsG0780041363.01 | -0.809661 | 1.694883e-50 | 1.001071e-47 |
| MsG0380016363.01 | MsG0780041363.01 | 0.821177 | 4.638545e-53 | 3.746522e-50 |
| MsG0380016449.01 | MsG0780041363.01 | 0.824280 | 8.790750e-54 | 7.750802e-51 |
| MsG0380016524.01 | MsG0780041363.01 | 0.804880 | 1.746738e-49 | 9.110500e-47 |
| MsG0380017091.01 | MsG0780041363.01 | 0.818309 | 2.096811e-52 | 1.563955e-49 |
| MsG0380017231.01 | MsG0780041363.01 | 0.825090 | 5.665938e-54 | 5.113797e-51 |
| MsG0380017240.01 | MsG0780041363.01 | 0.861972 | 7.043487e-64 | 2.029197e-60 |
| MsG0380017858.01 | MsG0780041363.01 | 0.811122 | 8.199328e-51 | 5.033228e-48 |
| MsG0380017997.01 | MsG0780041363.01 | 0.860943 | 1.452082e-63 | 4.038445e-60 |
| MsG0380018007.01 | MsG0780041363.01 | 0.840091 | 1.071401e-57 | 1.510019e-54 |
| MsG0580027938.01 | MsG0780041363.01 | 0.801263 | 9.779475e-49 | 4.649792e-46 |
| MsG0580027974.01 | MsG0780041363.01 | 0.804305 | 2.302669e-49 | 1.183204e-46 |
| MsG0580028228.01 | MsG0780041363.01 | 0.823364 | 1.441673e-53 | 1.238601e-50 |
| MsG0580028330.01 | MsG0780041363.01 | 0.830235 | 3.291800e-55 | 3.448086e-52 |
| MsG0580030179.01 | MsG0780041363.01 | 0.864251 | 1.390551e-64 | 4.337532e-61 |
| MsG0280006884.01 | MsG0780041363.01 | 0.871732 | 5.460175e-67 | 2.226101e-63 |
| MsG0280007419.01 | MsG0780041363.01 | 0.857671 | 1.392072e-62 | 3.463038e-59 |
| MsG0280007706.01 | MsG0780041363.01 | 0.801857 | 7.388747e-49 | 3.566285e-46 |
| MsG0280007844.01 | MsG0780041363.01 | 0.826070 | 3.319016e-54 | 3.080096e-51 |
| MsG0280007983.01 | MsG0780041363.01 | 0.838205 | 3.302706e-57 | 4.392045e-54 |
| MsG0280008407.01 | MsG0780041363.01 | 0.838219 | 3.274249e-57 | 4.356008e-54 |
| MsG0280009241.01 | MsG0780041363.01 | 0.895123 | 1.291646e-75 | 1.322415e-71 |
| MsG0780037232.01 | MsG0780041363.01 | 0.865649 | 5.065499e-65 | 1.660814e-61 |
| MsG0780038393.01 | MsG0780041363.01 | 0.809261 | 2.065066e-50 | 1.206775e-47 |
| MsG0780038810.01 | MsG0780041363.01 | 0.887543 | 1.301706e-72 | 9.719652e-69 |
| MsG0780039491.01 | MsG0780041363.01 | 0.816751 | 4.705812e-52 | 3.363155e-49 |
| MsG0780039916.01 | MsG0780041363.01 | 0.816433 | 5.543569e-52 | 3.927409e-49 |
| MsG0780039917.01 | MsG0780041363.01 | 0.815377 | 9.539782e-52 | 6.566064e-49 |
| MsG0780039918.01 | MsG0780041363.01 | 0.802045 | 6.759672e-49 | 3.278149e-46 |
| MsG0780040021.01 | MsG0780041363.01 | 0.829218 | 5.819676e-55 | 5.918474e-52 |
| MsG0780040118.01 | MsG0780041363.01 | 0.817100 | 3.928266e-52 | 2.834345e-49 |
| MsG0780040139.01 | MsG0780041363.01 | 0.830881 | 2.287205e-55 | 2.441414e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041363.01.T01 | MTR_7g109550 | 95.385 | 325 | 10 | 1 | 1 | 325 | 1 | 320 | 0.0 | 641 |
| MsG0780041363.01.T01 | MTR_7g094750 | 58.242 | 182 | 74 | 1 | 142 | 321 | 91 | 272 | 8.71e-72 | 226 |
| MsG0780041363.01.T01 | MTR_7g094750 | 58.242 | 182 | 74 | 1 | 142 | 321 | 91 | 272 | 1.56e-70 | 226 |
| MsG0780041363.01.T01 | MTR_2g022560 | 54.945 | 182 | 80 | 1 | 142 | 321 | 97 | 278 | 1.19e-67 | 219 |
| MsG0780041363.01.T01 | MTR_4g126950 | 52.660 | 188 | 88 | 1 | 139 | 325 | 106 | 293 | 2.04e-67 | 218 |
| MsG0780041363.01.T01 | MTR_5g033800 | 38.983 | 295 | 152 | 5 | 38 | 324 | 53 | 327 | 6.78e-67 | 215 |
| MsG0780041363.01.T01 | MTR_8g069790 | 46.256 | 227 | 114 | 2 | 106 | 324 | 134 | 360 | 1.20e-66 | 218 |
| MsG0780041363.01.T01 | MTR_5g033800 | 39.384 | 292 | 149 | 5 | 41 | 324 | 56 | 327 | 3.56e-65 | 213 |
| MsG0780041363.01.T01 | MTR_7g093450 | 40.809 | 272 | 141 | 5 | 66 | 324 | 167 | 431 | 7.15e-65 | 215 |
| MsG0780041363.01.T01 | MTR_0136s0010 | 43.621 | 243 | 127 | 3 | 86 | 324 | 117 | 353 | 2.86e-64 | 212 |
| MsG0780041363.01.T01 | MTR_5g059400 | 48.649 | 185 | 92 | 2 | 142 | 324 | 175 | 358 | 1.37e-63 | 210 |
| MsG0780041363.01.T01 | MTR_1g116130 | 48.649 | 185 | 92 | 2 | 142 | 324 | 175 | 358 | 1.37e-63 | 210 |
| MsG0780041363.01.T01 | MTR_4g121560 | 46.561 | 189 | 98 | 2 | 139 | 324 | 111 | 299 | 2.04e-58 | 195 |
| MsG0780041363.01.T01 | MTR_3g090120 | 47.027 | 185 | 92 | 3 | 142 | 320 | 129 | 313 | 9.99e-57 | 191 |
| MsG0780041363.01.T01 | MTR_8g093530 | 45.856 | 181 | 96 | 1 | 138 | 316 | 86 | 266 | 4.39e-56 | 188 |
| MsG0780041363.01.T01 | MTR_1g058380 | 44.792 | 192 | 101 | 3 | 139 | 325 | 52 | 243 | 5.04e-56 | 187 |
| MsG0780041363.01.T01 | MTR_5g071350 | 42.077 | 183 | 95 | 4 | 142 | 324 | 58 | 229 | 9.56e-46 | 160 |
| MsG0780041363.01.T01 | MTR_3g464570 | 39.891 | 183 | 99 | 4 | 142 | 324 | 43 | 214 | 1.24e-44 | 157 |
| MsG0780041363.01.T01 | MTR_1g112210 | 37.430 | 179 | 101 | 3 | 140 | 318 | 57 | 224 | 4.98e-44 | 155 |
| MsG0780041363.01.T01 | MTR_4g016940 | 38.889 | 180 | 100 | 3 | 140 | 316 | 84 | 256 | 4.00e-43 | 154 |
| MsG0780041363.01.T01 | MTR_7g070060 | 43.017 | 179 | 94 | 4 | 141 | 316 | 63 | 236 | 4.26e-43 | 151 |
| MsG0780041363.01.T01 | MTR_1g050448 | 38.889 | 180 | 97 | 4 | 140 | 318 | 51 | 218 | 5.00e-43 | 152 |
| MsG0780041363.01.T01 | MTR_3g049330 | 42.021 | 188 | 95 | 5 | 142 | 328 | 31 | 205 | 1.22e-42 | 151 |
| MsG0780041363.01.T01 | MTR_4g079700 | 36.916 | 214 | 111 | 6 | 108 | 318 | 19 | 211 | 1.29e-42 | 151 |
| MsG0780041363.01.T01 | MTR_2g091175 | 41.530 | 183 | 95 | 4 | 136 | 318 | 44 | 214 | 1.49e-42 | 151 |
| MsG0780041363.01.T01 | MTR_2g073500 | 39.153 | 189 | 91 | 6 | 140 | 318 | 27 | 201 | 1.52e-42 | 150 |
| MsG0780041363.01.T01 | MTR_4g014440 | 41.758 | 182 | 96 | 4 | 139 | 316 | 59 | 234 | 2.37e-42 | 151 |
| MsG0780041363.01.T01 | MTR_7g070060 | 43.017 | 179 | 94 | 4 | 141 | 316 | 63 | 236 | 9.36e-42 | 150 |
| MsG0780041363.01.T01 | MTR_5g034810 | 40.223 | 179 | 93 | 4 | 140 | 318 | 33 | 197 | 3.09e-41 | 147 |
| MsG0780041363.01.T01 | MTR_3g021060 | 41.573 | 178 | 90 | 6 | 140 | 316 | 44 | 208 | 4.29e-41 | 147 |
| MsG0780041363.01.T01 | MTR_2g073510 | 43.575 | 179 | 86 | 6 | 140 | 316 | 31 | 196 | 4.45e-41 | 147 |
| MsG0780041363.01.T01 | MTR_1g111010 | 42.623 | 183 | 90 | 8 | 139 | 318 | 29 | 199 | 9.96e-41 | 145 |
| MsG0780041363.01.T01 | MTR_1g112210 | 37.430 | 179 | 88 | 4 | 140 | 318 | 57 | 211 | 1.23e-40 | 146 |
| MsG0780041363.01.T01 | MTR_3g070900 | 41.176 | 187 | 96 | 5 | 140 | 321 | 104 | 281 | 1.54e-40 | 147 |
| MsG0780041363.01.T01 | MTR_2g015720 | 38.503 | 187 | 102 | 4 | 138 | 324 | 38 | 211 | 9.48e-40 | 143 |
| MsG0780041363.01.T01 | MTR_3g021090 | 37.853 | 177 | 98 | 3 | 140 | 316 | 29 | 193 | 9.69e-40 | 144 |
| MsG0780041363.01.T01 | MTR_3g035830 | 37.288 | 177 | 99 | 3 | 140 | 316 | 29 | 193 | 2.48e-39 | 142 |
| MsG0780041363.01.T01 | MTR_8g463790 | 36.702 | 188 | 103 | 5 | 137 | 318 | 66 | 243 | 2.81e-39 | 143 |
| MsG0780041363.01.T01 | MTR_5g083260 | 38.378 | 185 | 104 | 3 | 135 | 316 | 76 | 253 | 4.38e-39 | 143 |
| MsG0780041363.01.T01 | MTR_4g014430 | 39.785 | 186 | 102 | 3 | 140 | 322 | 106 | 284 | 6.26e-39 | 143 |
| MsG0780041363.01.T01 | MTR_7g068920 | 37.363 | 182 | 100 | 4 | 140 | 316 | 78 | 250 | 9.02e-39 | 142 |
| MsG0780041363.01.T01 | MTR_3g071650 | 40.782 | 179 | 94 | 4 | 142 | 316 | 89 | 259 | 4.13e-38 | 140 |
| MsG0780041363.01.T01 | MTR_4g087730 | 35.450 | 189 | 110 | 3 | 136 | 324 | 39 | 215 | 1.68e-37 | 137 |
| MsG0780041363.01.T01 | MTR_2g022580 | 50.400 | 125 | 60 | 1 | 202 | 324 | 2 | 126 | 2.40e-37 | 130 |
| MsG0780041363.01.T01 | MTR_5g082880 | 42.162 | 185 | 90 | 6 | 140 | 316 | 163 | 338 | 2.49e-37 | 140 |
| MsG0780041363.01.T01 | MTR_4g088030 | 39.548 | 177 | 95 | 5 | 142 | 318 | 33 | 197 | 3.40e-36 | 134 |
| MsG0780041363.01.T01 | MTR_6g061710 | 32.143 | 252 | 149 | 6 | 6 | 238 | 14 | 262 | 1.88e-32 | 126 |
| MsG0780041363.01.T01 | MTR_1g076690 | 51.685 | 89 | 43 | 0 | 142 | 230 | 223 | 311 | 2.02e-29 | 118 |
| MsG0780041363.01.T01 | MTR_5g035150 | 36.464 | 181 | 100 | 5 | 140 | 315 | 83 | 253 | 8.41e-28 | 112 |
| MsG0780041363.01.T01 | MTR_5g035080 | 33.143 | 175 | 106 | 3 | 142 | 315 | 75 | 239 | 5.92e-27 | 110 |
| MsG0780041363.01.T01 | MTR_2g016060 | 35.829 | 187 | 112 | 5 | 135 | 315 | 47 | 231 | 6.35e-27 | 109 |
| MsG0780041363.01.T01 | MTR_5g035090 | 34.091 | 176 | 108 | 4 | 141 | 315 | 82 | 250 | 1.21e-26 | 109 |
| MsG0780041363.01.T01 | MTR_6g016880 | 35.870 | 184 | 101 | 5 | 139 | 315 | 75 | 248 | 4.18e-26 | 108 |
| MsG0780041363.01.T01 | MTR_7g033230 | 34.225 | 187 | 103 | 5 | 136 | 316 | 258 | 430 | 4.52e-26 | 108 |
| MsG0780041363.01.T01 | MTR_7g033230 | 34.225 | 187 | 103 | 5 | 136 | 316 | 328 | 500 | 6.05e-26 | 108 |
| MsG0780041363.01.T01 | MTR_8g104970 | 28.832 | 274 | 159 | 7 | 53 | 317 | 41 | 287 | 8.44e-26 | 107 |
| MsG0780041363.01.T01 | MTR_8g027900 | 44.545 | 110 | 60 | 1 | 135 | 244 | 204 | 312 | 1.47e-25 | 107 |
| MsG0780041363.01.T01 | MTR_7g019140 | 45.055 | 91 | 50 | 0 | 140 | 230 | 77 | 167 | 7.41e-25 | 99.0 |
| MsG0780041363.01.T01 | MTR_3g109840 | 34.078 | 179 | 100 | 5 | 142 | 316 | 73 | 237 | 1.22e-24 | 103 |
| MsG0780041363.01.T01 | MTR_7g019120 | 31.148 | 183 | 115 | 3 | 139 | 317 | 76 | 251 | 9.07e-24 | 101 |
| MsG0780041363.01.T01 | MTR_5g035120 | 43.750 | 96 | 54 | 0 | 140 | 235 | 73 | 168 | 1.93e-22 | 92.8 |
| MsG0780041363.01.T01 | MTR_8g099300 | 32.402 | 179 | 110 | 4 | 141 | 315 | 73 | 244 | 2.96e-22 | 97.1 |
| MsG0780041363.01.T01 | MTR_6g007777 | 35.135 | 148 | 82 | 4 | 140 | 286 | 114 | 248 | 4.61e-22 | 96.7 |
| MsG0780041363.01.T01 | MTR_6g016875 | 33.514 | 185 | 115 | 5 | 136 | 316 | 58 | 238 | 4.97e-22 | 96.3 |
| MsG0780041363.01.T01 | MTR_6g016240 | 32.461 | 191 | 104 | 7 | 142 | 316 | 71 | 252 | 8.16e-22 | 95.9 |
| MsG0780041363.01.T01 | MTR_5g035070 | 34.078 | 179 | 109 | 4 | 142 | 318 | 87 | 258 | 4.44e-21 | 94.0 |
| MsG0780041363.01.T01 | MTR_3g464570 | 38.655 | 119 | 62 | 4 | 206 | 324 | 3 | 110 | 5.90e-21 | 91.3 |
| MsG0780041363.01.T01 | MTR_8g093870 | 27.805 | 205 | 128 | 4 | 140 | 330 | 131 | 329 | 8.89e-21 | 93.2 |
| MsG0780041363.01.T01 | MTR_4g092830 | 31.053 | 190 | 111 | 5 | 142 | 320 | 48 | 228 | 2.16e-20 | 91.7 |
| MsG0780041363.01.T01 | MTR_4g125060 | 28.788 | 198 | 121 | 4 | 140 | 323 | 130 | 321 | 3.11e-19 | 88.6 |
| MsG0780041363.01.T01 | MTR_4g125060 | 28.788 | 198 | 121 | 4 | 140 | 323 | 198 | 389 | 4.17e-19 | 88.6 |
| MsG0780041363.01.T01 | MTR_4g125060 | 27.805 | 205 | 128 | 4 | 140 | 330 | 169 | 367 | 6.13e-19 | 87.8 |
| MsG0780041363.01.T01 | MTR_7g070060 | 40.800 | 125 | 67 | 3 | 194 | 316 | 15 | 134 | 7.95e-19 | 85.9 |
| MsG0780041363.01.T01 | MTR_5g069320 | 32.558 | 129 | 59 | 4 | 197 | 324 | 156 | 257 | 2.69e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041363.01.T01 | AT3G62390 | 55.758 | 330 | 132 | 6 | 1 | 325 | 1 | 321 | 2.21e-124 | 363 |
| MsG0780041363.01.T01 | AT3G62390 | 55.758 | 330 | 132 | 6 | 1 | 325 | 1 | 321 | 4.00e-123 | 362 |
| MsG0780041363.01.T01 | AT5G19160 | 57.297 | 185 | 77 | 1 | 142 | 324 | 99 | 283 | 6.57e-71 | 224 |
| MsG0780041363.01.T01 | AT5G20590 | 39.938 | 323 | 180 | 7 | 11 | 324 | 8 | 325 | 5.62e-70 | 223 |
| MsG0780041363.01.T01 | AT5G19160 | 57.297 | 185 | 77 | 1 | 142 | 324 | 99 | 283 | 2.11e-69 | 224 |
| MsG0780041363.01.T01 | AT5G20590 | 39.938 | 323 | 180 | 7 | 11 | 324 | 8 | 325 | 8.01e-69 | 223 |
| MsG0780041363.01.T01 | AT3G06080 | 55.495 | 182 | 79 | 1 | 142 | 321 | 103 | 284 | 7.57e-68 | 216 |
| MsG0780041363.01.T01 | AT1G60790 | 42.662 | 293 | 147 | 7 | 49 | 324 | 87 | 375 | 6.11e-67 | 219 |
| MsG0780041363.01.T01 | AT3G06080 | 55.495 | 182 | 79 | 1 | 142 | 321 | 103 | 284 | 7.76e-67 | 217 |
| MsG0780041363.01.T01 | AT5G06700 | 51.596 | 188 | 88 | 2 | 139 | 324 | 252 | 438 | 7.72e-66 | 218 |
| MsG0780041363.01.T01 | AT3G12060 | 47.107 | 242 | 119 | 5 | 91 | 324 | 139 | 379 | 1.47e-65 | 216 |
| MsG0780041363.01.T01 | AT5G49340 | 47.120 | 191 | 98 | 3 | 137 | 324 | 95 | 285 | 6.57e-58 | 194 |
| MsG0780041363.01.T01 | AT1G48880 | 46.154 | 182 | 96 | 1 | 141 | 320 | 114 | 295 | 8.90e-56 | 188 |
| MsG0780041363.01.T01 | AT5G06230 | 45.312 | 192 | 97 | 2 | 138 | 321 | 58 | 249 | 9.52e-53 | 176 |
| MsG0780041363.01.T01 | AT5G06230 | 45.312 | 192 | 97 | 2 | 138 | 321 | 17 | 208 | 6.65e-52 | 176 |
| MsG0780041363.01.T01 | AT5G06230 | 45.312 | 192 | 97 | 2 | 138 | 321 | 58 | 249 | 1.55e-51 | 176 |
| MsG0780041363.01.T01 | AT3G11570 | 48.795 | 166 | 83 | 1 | 158 | 321 | 98 | 263 | 1.36e-48 | 168 |
| MsG0780041363.01.T01 | AT3G54260 | 42.373 | 177 | 91 | 3 | 142 | 318 | 51 | 216 | 1.67e-46 | 162 |
| MsG0780041363.01.T01 | AT2G38320 | 42.541 | 181 | 94 | 4 | 140 | 316 | 57 | 231 | 1.08e-45 | 160 |
| MsG0780041363.01.T01 | AT5G58600 | 39.894 | 188 | 101 | 5 | 142 | 328 | 66 | 242 | 1.98e-45 | 156 |
| MsG0780041363.01.T01 | AT2G40150 | 45.856 | 181 | 84 | 5 | 141 | 316 | 70 | 241 | 3.06e-45 | 159 |
| MsG0780041363.01.T01 | AT1G29050 | 41.530 | 183 | 96 | 2 | 142 | 324 | 61 | 232 | 1.40e-44 | 157 |
| MsG0780041363.01.T01 | AT5G58600 | 39.894 | 188 | 101 | 5 | 142 | 328 | 66 | 242 | 1.68e-44 | 157 |
| MsG0780041363.01.T01 | AT2G34070 | 38.942 | 208 | 113 | 3 | 111 | 318 | 37 | 230 | 2.03e-44 | 156 |
| MsG0780041363.01.T01 | AT3G55990 | 43.500 | 200 | 95 | 6 | 126 | 316 | 120 | 310 | 3.19e-44 | 158 |
| MsG0780041363.01.T01 | AT2G40160 | 41.398 | 186 | 94 | 5 | 142 | 321 | 77 | 253 | 3.97e-44 | 154 |
| MsG0780041363.01.T01 | AT2G30010 | 41.935 | 186 | 94 | 4 | 142 | 324 | 56 | 230 | 1.49e-43 | 154 |
| MsG0780041363.01.T01 | AT2G30010 | 41.935 | 186 | 94 | 4 | 142 | 324 | 99 | 273 | 2.20e-43 | 155 |
| MsG0780041363.01.T01 | AT2G30900 | 40.761 | 184 | 97 | 5 | 140 | 322 | 41 | 213 | 3.67e-43 | 150 |
| MsG0780041363.01.T01 | AT2G40160 | 41.398 | 186 | 94 | 5 | 142 | 321 | 77 | 253 | 4.24e-43 | 154 |
| MsG0780041363.01.T01 | AT2G40160 | 41.398 | 186 | 94 | 5 | 142 | 321 | 77 | 253 | 6.89e-43 | 154 |
| MsG0780041363.01.T01 | AT2G31110 | 34.081 | 223 | 126 | 5 | 96 | 318 | 8 | 209 | 3.42e-42 | 147 |
| MsG0780041363.01.T01 | AT2G42570 | 39.548 | 177 | 95 | 3 | 142 | 318 | 47 | 211 | 7.50e-42 | 149 |
| MsG0780041363.01.T01 | AT2G30900 | 40.761 | 184 | 97 | 5 | 140 | 322 | 41 | 213 | 1.12e-41 | 149 |
| MsG0780041363.01.T01 | AT1G73140 | 36.111 | 216 | 116 | 6 | 116 | 319 | 35 | 240 | 2.44e-41 | 149 |
| MsG0780041363.01.T01 | AT2G31110 | 34.081 | 223 | 126 | 5 | 96 | 318 | 8 | 209 | 5.78e-41 | 147 |
| MsG0780041363.01.T01 | AT1G78710 | 37.306 | 193 | 107 | 5 | 127 | 318 | 16 | 195 | 8.76e-40 | 142 |
| MsG0780041363.01.T01 | AT5G01360 | 36.464 | 181 | 103 | 4 | 140 | 316 | 34 | 206 | 3.85e-39 | 142 |
| MsG0780041363.01.T01 | AT5G01620 | 39.691 | 194 | 104 | 4 | 134 | 322 | 102 | 287 | 4.07e-39 | 144 |
| MsG0780041363.01.T01 | AT5G01620 | 39.691 | 194 | 104 | 4 | 134 | 322 | 102 | 287 | 4.07e-39 | 144 |
| MsG0780041363.01.T01 | AT5G01620 | 39.691 | 194 | 104 | 4 | 134 | 322 | 110 | 295 | 5.55e-39 | 143 |
| MsG0780041363.01.T01 | AT1G78710 | 37.306 | 193 | 107 | 5 | 127 | 318 | 23 | 202 | 6.58e-39 | 141 |
| MsG0780041363.01.T01 | AT5G01360 | 36.464 | 181 | 103 | 4 | 140 | 316 | 90 | 262 | 7.96e-39 | 142 |
| MsG0780041363.01.T01 | AT3G11030 | 38.919 | 185 | 103 | 3 | 135 | 316 | 99 | 276 | 7.14e-38 | 140 |
| MsG0780041363.01.T01 | AT2G40320 | 36.735 | 196 | 111 | 4 | 124 | 316 | 66 | 251 | 3.29e-37 | 138 |
| MsG0780041363.01.T01 | AT3G14850 | 36.082 | 194 | 112 | 4 | 137 | 330 | 29 | 210 | 5.69e-37 | 136 |
| MsG0780041363.01.T01 | AT2G38320 | 40.909 | 154 | 82 | 3 | 166 | 316 | 1 | 148 | 1.09e-34 | 129 |
| MsG0780041363.01.T01 | AT5G51640 | 35.859 | 198 | 110 | 6 | 125 | 317 | 121 | 306 | 4.79e-32 | 125 |
| MsG0780041363.01.T01 | AT4G25360 | 49.485 | 97 | 49 | 0 | 134 | 230 | 167 | 263 | 4.51e-31 | 123 |
| MsG0780041363.01.T01 | AT4G25360 | 49.485 | 97 | 49 | 0 | 134 | 230 | 167 | 263 | 4.51e-31 | 123 |
| MsG0780041363.01.T01 | AT1G70230 | 39.227 | 181 | 96 | 6 | 142 | 318 | 79 | 249 | 1.02e-30 | 120 |
| MsG0780041363.01.T01 | AT3G28150 | 37.705 | 183 | 103 | 4 | 137 | 315 | 65 | 240 | 5.81e-29 | 115 |
| MsG0780041363.01.T01 | AT5G15890 | 31.250 | 256 | 158 | 8 | 65 | 317 | 115 | 355 | 1.24e-28 | 116 |
| MsG0780041363.01.T01 | AT1G01430 | 33.981 | 206 | 118 | 6 | 116 | 316 | 76 | 268 | 5.02e-28 | 113 |
| MsG0780041363.01.T01 | AT4G11090 | 34.444 | 180 | 106 | 4 | 98 | 276 | 39 | 207 | 1.22e-25 | 106 |
| MsG0780041363.01.T01 | AT4G23790 | 43.089 | 123 | 64 | 3 | 120 | 241 | 61 | 178 | 4.51e-25 | 105 |
| MsG0780041363.01.T01 | AT2G14530 | 30.909 | 220 | 125 | 10 | 114 | 316 | 32 | 241 | 1.25e-23 | 100 |
| MsG0780041363.01.T01 | AT4G01080 | 32.955 | 176 | 107 | 4 | 141 | 315 | 90 | 255 | 1.91e-23 | 100 |
| MsG0780041363.01.T01 | AT3G02440 | 35.526 | 152 | 95 | 3 | 87 | 238 | 74 | 222 | 1.26e-22 | 98.6 |
| MsG0780041363.01.T01 | AT3G02440 | 35.526 | 152 | 95 | 3 | 87 | 238 | 82 | 230 | 1.43e-22 | 98.6 |
| MsG0780041363.01.T01 | AT5G20680 | 27.957 | 279 | 166 | 9 | 57 | 320 | 140 | 398 | 3.72e-22 | 97.4 |
| MsG0780041363.01.T01 | AT5G20680 | 27.957 | 279 | 166 | 9 | 57 | 320 | 140 | 398 | 3.72e-22 | 97.4 |
| MsG0780041363.01.T01 | AT5G20680 | 27.957 | 279 | 166 | 9 | 57 | 320 | 140 | 398 | 3.72e-22 | 97.4 |
| MsG0780041363.01.T01 | AT5G20680 | 27.957 | 279 | 166 | 9 | 57 | 320 | 140 | 398 | 3.72e-22 | 97.4 |
| MsG0780041363.01.T01 | AT5G20680 | 27.957 | 279 | 166 | 9 | 57 | 320 | 122 | 380 | 3.96e-22 | 97.4 |
| MsG0780041363.01.T01 | AT2G37720 | 31.959 | 194 | 120 | 5 | 139 | 322 | 140 | 331 | 4.83e-22 | 97.1 |
| MsG0780041363.01.T01 | AT5G20680 | 27.957 | 279 | 166 | 9 | 57 | 320 | 46 | 304 | 6.65e-22 | 96.3 |
| MsG0780041363.01.T01 | AT5G64470 | 34.031 | 191 | 105 | 9 | 142 | 320 | 55 | 236 | 5.47e-21 | 92.0 |
| MsG0780041363.01.T01 | AT5G64470 | 34.031 | 191 | 105 | 9 | 142 | 320 | 55 | 236 | 6.88e-21 | 92.0 |
| MsG0780041363.01.T01 | AT5G64470 | 34.031 | 191 | 105 | 9 | 142 | 320 | 55 | 236 | 1.10e-20 | 92.4 |
| MsG0780041363.01.T01 | AT5G64470 | 34.031 | 191 | 105 | 9 | 142 | 320 | 55 | 236 | 1.33e-20 | 92.0 |
| MsG0780041363.01.T01 | AT5G64020 | 28.125 | 192 | 126 | 4 | 142 | 323 | 57 | 246 | 8.80e-20 | 89.7 |
| MsG0780041363.01.T01 | AT5G15900 | 28.889 | 180 | 115 | 4 | 142 | 315 | 67 | 239 | 1.26e-19 | 89.4 |
| MsG0780041363.01.T01 | AT5G15900 | 28.889 | 180 | 115 | 4 | 142 | 315 | 86 | 258 | 1.30e-19 | 89.7 |
| MsG0780041363.01.T01 | AT2G34070 | 35.714 | 112 | 61 | 2 | 212 | 323 | 1 | 101 | 3.00e-15 | 74.7 |
| MsG0780041363.01.T01 | AT3G14850 | 31.933 | 119 | 69 | 4 | 212 | 330 | 1 | 107 | 7.76e-11 | 62.0 |
Find 55 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTATAGTTTCAGGTTTC+TGG | 0.139405 | 7:+90069736 | MsG0780041363.01.T01:CDS |
| TTCCCATTGGTTCCTATTAA+TGG | 0.150183 | 7:-90069627 | None:intergenic |
| TCCTTTCATCTTTCACTATC+TGG | 0.168937 | 7:+90068423 | MsG0780041363.01.T01:CDS |
| CCTTGGAAGGTCACAATCTT+TGG | 0.179023 | 7:-90068909 | None:intergenic |
| AGAAGCCAAAAGAATGTTTC+AGG | 0.248012 | 7:+90068578 | MsG0780041363.01.T01:CDS |
| ATGGAGAGGAGCTGATATTT+TGG | 0.261754 | 7:+90069975 | MsG0780041363.01.T01:CDS |
| TCAAAACCTTCATCTATAAA+AGG | 0.284074 | 7:-90068833 | None:intergenic |
| AGAGAGGGAACTATAGTTTC+AGG | 0.285584 | 7:+90069729 | MsG0780041363.01.T01:CDS |
| CAAGAATCTCTAGCATAAAT+AGG | 0.310027 | 7:-90068809 | None:intergenic |
| TTGTGGGTGATTCCATTAAT+AGG | 0.313259 | 7:+90069615 | MsG0780041363.01.T01:CDS |
| TGGAGTTTATAAGAGGAAAA+AGG | 0.315433 | 7:+90069585 | MsG0780041363.01.T01:CDS |
| TGGATCCTGAAACATTCTTT+TGG | 0.320732 | 7:-90068583 | None:intergenic |
| ACTATAGTTCCCTCTCTCTT+TGG | 0.323759 | 7:-90069723 | None:intergenic |
| GTCAATGAATGAACAGTTAA+AGG | 0.328689 | 7:-90068500 | None:intergenic |
| GTGATTTAACAAAAGGGTAT+TGG | 0.335445 | 7:+90068768 | MsG0780041363.01.T01:CDS |
| TGATTTAACAAAAGGGTATT+GGG | 0.360468 | 7:+90068769 | MsG0780041363.01.T01:CDS |
| CTTGGAAGGTCACAATCTTT+GGG | 0.364337 | 7:-90068908 | None:intergenic |
| AAAGAGTGTGATTTAACAAA+AGG | 0.376080 | 7:+90068761 | MsG0780041363.01.T01:CDS |
| CGTGCCTCATACACTCTCTT+TGG | 0.387282 | 7:-90069686 | None:intergenic |
| CGAATTGATGCAATTGATCA+TGG | 0.412507 | 7:+90069943 | MsG0780041363.01.T01:CDS |
| AGATTTACAGAGACAGTGTT+TGG | 0.414712 | 7:-90068473 | None:intergenic |
| GAGAAGTGCTAACCCAGCTT+TGG | 0.426335 | 7:-90070034 | None:intergenic |
| TGAAGGTGTAGTGGTTGATT+TGG | 0.426959 | 7:-90068450 | None:intergenic |
| AAAATGTTGGAGTTTATAAG+AGG | 0.432567 | 7:+90069578 | MsG0780041363.01.T01:CDS |
| TTGTGAGGGGAATGGAAGAT+TGG | 0.439163 | 7:+90068856 | MsG0780041363.01.T01:CDS |
| ATTGCATCAATTCGCAAAGT+TGG | 0.457150 | 7:-90069934 | None:intergenic |
| GAAAGATGAAAGGAAGAAGA+TGG | 0.459359 | 7:-90068414 | None:intergenic |
| AGGAAAATTACCAAAGAGAG+AGG | 0.476594 | 7:+90069713 | MsG0780041363.01.T01:CDS |
| TTGATCATGGTTCGTCAAGA+TGG | 0.487731 | 7:+90069956 | MsG0780041363.01.T01:CDS |
| AGACGGTTATCTATTAAAGA+TGG | 0.489310 | 7:-90068551 | None:intergenic |
| TCACATCACAAAACCAAAGC+TGG | 0.490317 | 7:+90070021 | MsG0780041363.01.T01:CDS |
| AAGAGTGTGATTTAACAAAA+GGG | 0.500174 | 7:+90068762 | MsG0780041363.01.T01:CDS |
| ATTCCATTAATAGGAACCAA+TGG | 0.514445 | 7:+90069624 | MsG0780041363.01.T01:CDS |
| TGCACAACATTGATTCCCAT+TGG | 0.516029 | 7:-90069640 | None:intergenic |
| CCAAAGATTGTGACCTTCCA+AGG | 0.518341 | 7:+90068909 | MsG0780041363.01.T01:CDS |
| TGGATAGAAACTTTACTAAG+TGG | 0.522870 | 7:+90068876 | MsG0780041363.01.T01:CDS |
| CATGAAAGCAAAGCAAGAGT+AGG | 0.524542 | 7:+90069898 | MsG0780041363.01.T01:CDS |
| AGATCCAAAGAGAGTGTATG+AGG | 0.528363 | 7:+90069682 | MsG0780041363.01.T01:CDS |
| TTCCATTAATAGGAACCAAT+GGG | 0.535430 | 7:+90069625 | MsG0780041363.01.T01:CDS |
| GCTATAGAAAACAACCATGT+TGG | 0.538015 | 7:+90068614 | MsG0780041363.01.T01:CDS |
| ATGAAAGCAAAGCAAGAGTA+GGG | 0.551438 | 7:+90069899 | MsG0780041363.01.T01:CDS |
| GAAACTTTACTAAGTGGAGA+TGG | 0.558108 | 7:+90068882 | MsG0780041363.01.T01:CDS |
| ACAGAGACAGTGTTTGGTGA+AGG | 0.563414 | 7:-90068467 | None:intergenic |
| GTGAAGAGTAAAAGTCTAGT+GGG | 0.564116 | 7:-90068374 | None:intergenic |
| AGTGTTTGGTGAAGGTGTAG+TGG | 0.573224 | 7:-90068459 | None:intergenic |
| TGTGAAGAGTAAAAGTCTAG+TGG | 0.574760 | 7:-90068375 | None:intergenic |
| GCCAGATAGTGAAAGATGAA+AGG | 0.582837 | 7:-90068424 | None:intergenic |
| CACATCACAAAACCAAAGCT+GGG | 0.583781 | 7:+90070022 | MsG0780041363.01.T01:CDS |
| TTGAGAGAGACTACCTTGGA+AGG | 0.601243 | 7:-90068922 | None:intergenic |
| GAGTGTATGAGGCACGTGGA+AGG | 0.601700 | 7:+90069693 | MsG0780041363.01.T01:CDS |
| CAGTTGAAGTAGCACCAACA+TGG | 0.608096 | 7:-90068628 | None:intergenic |
| CATGGTTCGTCAAGATGGAG+AGG | 0.632218 | 7:+90069961 | MsG0780041363.01.T01:CDS |
| GGAAAATTACCAAAGAGAGA+GGG | 0.638676 | 7:+90069714 | MsG0780041363.01.T01:CDS |
| AATGCATGGTAATAGAACAA+AGG | 0.639849 | 7:+90068664 | MsG0780041363.01.T01:CDS |
| AAGAGAGTGTATGAGGCACG+TGG | 0.685399 | 7:+90069689 | MsG0780041363.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAATTCAATATTTTTTTT+TGG | + | Chr7:90068941-90068960 | MsG0780041363.01.T01:intron | 10.0% |
| !!! | AGAACAAATATCAAATATTT+TGG | - | Chr7:90069817-90069836 | None:intergenic | 15.0% |
| !!! | GAACAAATATCAAATATTTT+GGG | - | Chr7:90069816-90069835 | None:intergenic | 15.0% |
| !!! | TAAAGTTTTGATTTTTAAGA+AGG | + | Chr7:90068718-90068737 | MsG0780041363.01.T01:CDS | 15.0% |
| !! | AATGTATAATTGTATATGAC+TGG | + | Chr7:90069789-90069808 | MsG0780041363.01.T01:intron | 20.0% |
| !! | TAATTATTCAGAACTTTACT+TGG | + | Chr7:90069759-90069778 | MsG0780041363.01.T01:intron | 20.0% |
| !!! | CAAAAGACATACAATTATTT+TGG | + | Chr7:90069283-90069302 | MsG0780041363.01.T01:intron | 20.0% |
| !!! | GCAAAGTTAATTTTATTCTT+TGG | + | Chr7:90069522-90069541 | MsG0780041363.01.T01:intron | 20.0% |
| ! | AAAATGTTGGAGTTTATAAG+AGG | + | Chr7:90069578-90069597 | MsG0780041363.01.T01:CDS | 25.0% |
| ! | AATAATTTCATGGACCAAAT+TGG | - | Chr7:90069261-90069280 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTAATCCAAACA+AGG | - | Chr7:90069019-90069038 | None:intergenic | 25.0% |
| ! | ATGTATTGTGTTAGTCAATT+TGG | + | Chr7:90069354-90069373 | MsG0780041363.01.T01:intron | 25.0% |
| ! | CAAAATCATTGTTTACTCTT+AGG | + | Chr7:90069471-90069490 | MsG0780041363.01.T01:intron | 25.0% |
| ! | CAAATAAGTCAATCCAAATA+AGG | + | Chr7:90069221-90069240 | MsG0780041363.01.T01:intron | 25.0% |
| ! | TCAAAACCTTCATCTATAAA+AGG | - | Chr7:90068836-90068855 | None:intergenic | 25.0% |
| !! | AAAGAGTGTGATTTAACAAA+AGG | + | Chr7:90068761-90068780 | MsG0780041363.01.T01:CDS | 25.0% |
| !! | AAGAGTGTGATTTAACAAAA+GGG | + | Chr7:90068762-90068781 | MsG0780041363.01.T01:CDS | 25.0% |
| !! | GTCTTTTGTCAATAATTTCA+TGG | - | Chr7:90069271-90069290 | None:intergenic | 25.0% |
| !! | GTTAATTTTACTTCAATGCA+TGG | + | Chr7:90068650-90068669 | MsG0780041363.01.T01:CDS | 25.0% |
| !! | TTTTTGTAGAGTGAAGTTTT+GGG | - | Chr7:90068528-90068547 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGATTGTT+TGG | - | Chr7:90069186-90069205 | None:intergenic | 25.0% |
| !!! | GGATATTATTTTTCTGTCAT+AGG | + | Chr7:90069543-90069562 | MsG0780041363.01.T01:intron | 25.0% |
| !!! | TAAGTTTTGTGAGATTGTTT+GGG | - | Chr7:90069185-90069204 | None:intergenic | 25.0% |
| !!! | TGATTTAACAAAAGGGTATT+GGG | + | Chr7:90068769-90068788 | MsG0780041363.01.T01:CDS | 25.0% |
| !!! | TGTTTTAAGTTGTTTTCGTA+AGG | + | Chr7:90069156-90069175 | MsG0780041363.01.T01:intron | 25.0% |
| !!! | TTTGATTTTTAAGAAGGTTG+AGG | + | Chr7:90068724-90068743 | MsG0780041363.01.T01:CDS | 25.0% |
| !!! | TTTTTTGTAGAGTGAAGTTT+TGG | - | Chr7:90068529-90068548 | None:intergenic | 25.0% |
| AATGCATGGTAATAGAACAA+AGG | + | Chr7:90068664-90068683 | MsG0780041363.01.T01:CDS | 30.0% | |
| AGACGGTTATCTATTAAAGA+TGG | - | Chr7:90068554-90068573 | None:intergenic | 30.0% | |
| ATTCCATTAATAGGAACCAA+TGG | + | Chr7:90069624-90069643 | MsG0780041363.01.T01:CDS | 30.0% | |
| ATTGTTGACAAGACATACTT+AGG | + | Chr7:90069385-90069404 | MsG0780041363.01.T01:intron | 30.0% | |
| CAAATAAGGATGTATTTCGT+TGG | + | Chr7:90069235-90069254 | MsG0780041363.01.T01:intron | 30.0% | |
| CAACGAAATACATCCTTATT+TGG | - | Chr7:90069237-90069256 | None:intergenic | 30.0% | |
| CAAGAATCTCTAGCATAAAT+AGG | - | Chr7:90068812-90068831 | None:intergenic | 30.0% | |
| GTCAATGAATGAACAGTTAA+AGG | - | Chr7:90068503-90068522 | None:intergenic | 30.0% | |
| GTTCAATGCAACAAAAATGT+TGG | + | Chr7:90069565-90069584 | MsG0780041363.01.T01:CDS | 30.0% | |
| TGGAGTTTATAAGAGGAAAA+AGG | + | Chr7:90069585-90069604 | MsG0780041363.01.T01:CDS | 30.0% | |
| TGGATAGAAACTTTACTAAG+TGG | + | Chr7:90068876-90068895 | MsG0780041363.01.T01:CDS | 30.0% | |
| TTCCATTAATAGGAACCAAT+GGG | + | Chr7:90069625-90069644 | MsG0780041363.01.T01:CDS | 30.0% | |
| TTGTTGACAAGACATACTTA+GGG | + | Chr7:90069386-90069405 | MsG0780041363.01.T01:intron | 30.0% | |
| ! | GTGATTTAACAAAAGGGTAT+TGG | + | Chr7:90068768-90068787 | MsG0780041363.01.T01:CDS | 30.0% |
| ! | GTTTTCTATAGCTTCAGATT+TGG | - | Chr7:90068606-90068625 | None:intergenic | 30.0% |
| ! | TCTTGTCCTTTTATAGATGA+AGG | + | Chr7:90068827-90068846 | MsG0780041363.01.T01:CDS | 30.0% |
| ACATCCAAGAACTATAGTGA+CGG | + | Chr7:90069428-90069447 | MsG0780041363.01.T01:intron | 35.0% | |
| AGAAGCCAAAAGAATGTTTC+AGG | + | Chr7:90068578-90068597 | MsG0780041363.01.T01:CDS | 35.0% | |
| AGATTTACAGAGACAGTGTT+TGG | - | Chr7:90068476-90068495 | None:intergenic | 35.0% | |
| AGGAAAATTACCAAAGAGAG+AGG | + | Chr7:90069713-90069732 | MsG0780041363.01.T01:CDS | 35.0% | |
| ATGAAAGCAAAGCAAGAGTA+GGG | + | Chr7:90069899-90069918 | MsG0780041363.01.T01:CDS | 35.0% | |
| ATGTATTTCGTTGGCCAATT+TGG | + | Chr7:90069244-90069263 | MsG0780041363.01.T01:intron | 35.0% | |
| ATTGCATCAATTCGCAAAGT+TGG | - | Chr7:90069937-90069956 | None:intergenic | 35.0% | |
| CGAATTGATGCAATTGATCA+TGG | + | Chr7:90069943-90069962 | MsG0780041363.01.T01:CDS | 35.0% | |
| GAAACTTTACTAAGTGGAGA+TGG | + | Chr7:90068882-90068901 | MsG0780041363.01.T01:CDS | 35.0% | |
| GAAAGATGAAAGGAAGAAGA+TGG | - | Chr7:90068417-90068436 | None:intergenic | 35.0% | |
| GCTATAGAAAACAACCATGT+TGG | + | Chr7:90068614-90068633 | MsG0780041363.01.T01:CDS | 35.0% | |
| GGAAAATTACCAAAGAGAGA+GGG | + | Chr7:90069714-90069733 | MsG0780041363.01.T01:CDS | 35.0% | |
| GTGAAGAGTAAAAGTCTAGT+GGG | - | Chr7:90068377-90068396 | None:intergenic | 35.0% | |
| TCCTTTCATCTTTCACTATC+TGG | + | Chr7:90068423-90068442 | MsG0780041363.01.T01:CDS | 35.0% | |
| TGTGAAGAGTAAAAGTCTAG+TGG | - | Chr7:90068378-90068397 | None:intergenic | 35.0% | |
| TGTTCTTTCTGCAACTTTGT+AGG | + | Chr7:90069831-90069850 | MsG0780041363.01.T01:intron | 35.0% | |
| TTGCAATTGTAGTCATGCTT+AGG | + | Chr7:90068993-90069012 | MsG0780041363.01.T01:intron | 35.0% | |
| TTGTGGGTGATTCCATTAAT+AGG | + | Chr7:90069615-90069634 | MsG0780041363.01.T01:CDS | 35.0% | |
| ! | TGGATCCTGAAACATTCTTT+TGG | - | Chr7:90068586-90068605 | None:intergenic | 35.0% |
| !! | GAACTATAGTTTCAGGTTTC+TGG | + | Chr7:90069736-90069755 | MsG0780041363.01.T01:CDS | 35.0% |
| !! | TTCCCATTGGTTCCTATTAA+TGG | - | Chr7:90069630-90069649 | None:intergenic | 35.0% |
| !!! | AGATGAAGGTTTTGATTGTG+AGG | + | Chr7:90068841-90068860 | MsG0780041363.01.T01:CDS | 35.0% |
| !!! | AGGAAAAAGGCTAGTTTTTG+TGG | + | Chr7:90069598-90069617 | MsG0780041363.01.T01:CDS | 35.0% |
| !!! | ATGAAGGTTTTGATTGTGAG+GGG | + | Chr7:90068843-90068862 | MsG0780041363.01.T01:CDS | 35.0% |
| !!! | GATGAAGGTTTTGATTGTGA+GGG | + | Chr7:90068842-90068861 | MsG0780041363.01.T01:CDS | 35.0% |
| !!! | GGAAAAAGGCTAGTTTTTGT+GGG | + | Chr7:90069599-90069618 | MsG0780041363.01.T01:CDS | 35.0% |
| !!! | TCTTTTGGCTTCTAGAAAGA+CGG | - | Chr7:90068571-90068590 | None:intergenic | 35.0% |
| ACTATAGTTCCCTCTCTCTT+TGG | - | Chr7:90069726-90069745 | None:intergenic | 40.0% | |
| AGAGAGGGAACTATAGTTTC+AGG | + | Chr7:90069729-90069748 | MsG0780041363.01.T01:CDS | 40.0% | |
| CACATCACAAAACCAAAGCT+GGG | + | Chr7:90070022-90070041 | MsG0780041363.01.T01:CDS | 40.0% | |
| CATGAAAGCAAAGCAAGAGT+AGG | + | Chr7:90069898-90069917 | MsG0780041363.01.T01:CDS | 40.0% | |
| CTTGGAAGGTCACAATCTTT+GGG | - | Chr7:90068911-90068930 | None:intergenic | 40.0% | |
| GAATTTGAGAGAGACTACCT+TGG | - | Chr7:90068929-90068948 | None:intergenic | 40.0% | |
| GCCAGATAGTGAAAGATGAA+AGG | - | Chr7:90068427-90068446 | None:intergenic | 40.0% | |
| GGAGTTGCAAAAGTGAAGTT+AGG | + | Chr7:90069492-90069511 | MsG0780041363.01.T01:intron | 40.0% | |
| GTTACCGTCACTATAGTTCT+TGG | - | Chr7:90069435-90069454 | None:intergenic | 40.0% | |
| TCACATCACAAAACCAAAGC+TGG | + | Chr7:90070021-90070040 | MsG0780041363.01.T01:CDS | 40.0% | |
| TTGATCATGGTTCGTCAAGA+TGG | + | Chr7:90069956-90069975 | MsG0780041363.01.T01:CDS | 40.0% | |
| ! | AGATCCAAAGAGAGTGTATG+AGG | + | Chr7:90069682-90069701 | MsG0780041363.01.T01:CDS | 40.0% |
| ! | ATGGAGAGGAGCTGATATTT+TGG | + | Chr7:90069975-90069994 | MsG0780041363.01.T01:CDS | 40.0% |
| ! | TGAAGGTGTAGTGGTTGATT+TGG | - | Chr7:90068453-90068472 | None:intergenic | 40.0% |
| ! | TGGTTTTCAACACAGCACAT+TGG | + | Chr7:90069995-90070014 | MsG0780041363.01.T01:CDS | 40.0% |
| ! | TTTTCAACACAGCACATTGG+TGG | + | Chr7:90069998-90070017 | MsG0780041363.01.T01:CDS | 40.0% |
| !! | TGCACAACATTGATTCCCAT+TGG | - | Chr7:90069643-90069662 | None:intergenic | 40.0% |
| !!! | TTGTAGAGTGAAGTTTTGGG+TGG | - | Chr7:90068525-90068544 | None:intergenic | 40.0% |
| CAGTTGAAGTAGCACCAACA+TGG | - | Chr7:90068631-90068650 | None:intergenic | 45.0% | |
| CCAAAGATTGTGACCTTCCA+AGG | + | Chr7:90068909-90068928 | MsG0780041363.01.T01:CDS | 45.0% | |
| CCTTGGAAGGTCACAATCTT+TGG | - | Chr7:90068912-90068931 | None:intergenic | 45.0% | |
| TTGAGAGAGACTACCTTGGA+AGG | - | Chr7:90068925-90068944 | None:intergenic | 45.0% | |
| TTGTGAGGGGAATGGAAGAT+TGG | + | Chr7:90068856-90068875 | MsG0780041363.01.T01:CDS | 45.0% | |
| ! | ACAGAGACAGTGTTTGGTGA+AGG | - | Chr7:90068470-90068489 | None:intergenic | 45.0% |
| ! | AGTGTTTGGTGAAGGTGTAG+TGG | - | Chr7:90068462-90068481 | None:intergenic | 45.0% |
| !! | AGTCATGCTTAGGCCTTGTT+TGG | + | Chr7:90069003-90069022 | MsG0780041363.01.T01:intron | 45.0% |
| !!! | GGTTTTGATTGTGAGGGGAA+TGG | + | Chr7:90068848-90068867 | MsG0780041363.01.T01:CDS | 45.0% |
| CATGGTTCGTCAAGATGGAG+AGG | + | Chr7:90069961-90069980 | MsG0780041363.01.T01:CDS | 50.0% | |
| CGTGCCTCATACACTCTCTT+TGG | - | Chr7:90069689-90069708 | None:intergenic | 50.0% | |
| ! | AAGAGAGTGTATGAGGCACG+TGG | + | Chr7:90069689-90069708 | MsG0780041363.01.T01:CDS | 50.0% |
| !! | GAGAAGTGCTAACCCAGCTT+TGG | - | Chr7:90070037-90070056 | None:intergenic | 50.0% |
| GAGTGTATGAGGCACGTGGA+AGG | + | Chr7:90069693-90069712 | MsG0780041363.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 90068344 | 90070068 | 90068344 | ID=MsG0780041363.01;Name=MsG0780041363.01 |
| Chr7 | mRNA | 90068344 | 90070068 | 90068344 | ID=MsG0780041363.01.T01;Parent=MsG0780041363.01;Name=MsG0780041363.01.T01;_AED=0.36;_eAED=0.38;_QI=0|0|0|1|1|1|3|0|331 |
| Chr7 | exon | 90068344 | 90068930 | 90068344 | ID=MsG0780041363.01.T01:exon:20764;Parent=MsG0780041363.01.T01 |
| Chr7 | exon | 90069565 | 90069757 | 90069565 | ID=MsG0780041363.01.T01:exon:20765;Parent=MsG0780041363.01.T01 |
| Chr7 | exon | 90069853 | 90070068 | 90069853 | ID=MsG0780041363.01.T01:exon:20766;Parent=MsG0780041363.01.T01 |
| Chr7 | CDS | 90068344 | 90068930 | 90068344 | ID=MsG0780041363.01.T01:cds;Parent=MsG0780041363.01.T01 |
| Chr7 | CDS | 90069565 | 90069757 | 90069565 | ID=MsG0780041363.01.T01:cds;Parent=MsG0780041363.01.T01 |
| Chr7 | CDS | 90069853 | 90070068 | 90069853 | ID=MsG0780041363.01.T01:cds;Parent=MsG0780041363.01.T01 |
| Gene Sequence |
| Protein sequence |
