Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006182.01.T01 | XP_013470457.1 | 54.373 | 263 | 33 | 4 | 1 | 188 | 27 | 277 | 1.63E-74 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006182.01.T01 | A7WM73 | 37.175 | 269 | 72 | 8 | 5 | 188 | 26 | 282 | 3.02E-39 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006182.01.T01 | A0A072W2M8 | 54.373 | 263 | 33 | 4 | 1 | 188 | 27 | 277 | 7.80e-75 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048889.01 | MsG0180006182.01 | 0.827177 | 1.806648e-54 | 1.730950e-51 |
| MsG0080049008.01 | MsG0180006182.01 | 0.825453 | 4.648360e-54 | 4.238508e-51 |
| MsG0080049023.01 | MsG0180006182.01 | -0.803478 | 3.420304e-49 | 1.720554e-46 |
| MsG0180000076.01 | MsG0180006182.01 | 0.829465 | 5.069445e-55 | 5.192543e-52 |
| MsG0180000367.01 | MsG0180006182.01 | 0.802329 | 5.906357e-49 | 2.885393e-46 |
| MsG0180000551.01 | MsG0180006182.01 | 0.826085 | 3.290993e-54 | 3.055434e-51 |
| MsG0180001290.01 | MsG0180006182.01 | 0.834697 | 2.580732e-56 | 3.085929e-53 |
| MsG0180001358.01 | MsG0180006182.01 | 0.835695 | 1.444533e-56 | 1.780261e-53 |
| MsG0180002984.01 | MsG0180006182.01 | 0.840595 | 7.908196e-58 | 1.131912e-54 |
| MsG0180003504.01 | MsG0180006182.01 | 0.805324 | 1.410201e-49 | 7.438850e-47 |
| MsG0180003905.01 | MsG0180006182.01 | 0.802202 | 6.273062e-49 | 3.054375e-46 |
| MsG0180004027.01 | MsG0180006182.01 | 0.874940 | 4.559642e-68 | 2.091260e-64 |
| MsG0180004124.01 | MsG0180006182.01 | -0.813519 | 2.457357e-51 | 1.608300e-48 |
| MsG0180004125.01 | MsG0180006182.01 | -0.811829 | 5.756609e-51 | 3.600307e-48 |
| MsG0180004126.01 | MsG0180006182.01 | 0.831311 | 1.793638e-55 | 1.939048e-52 |
| MsG0180004510.01 | MsG0180006182.01 | 0.893433 | 6.311973e-75 | 6.009878e-71 |
| MsG0180004559.01 | MsG0180006182.01 | 0.820448 | 6.821194e-53 | 5.398964e-50 |
| MsG0180004652.01 | MsG0180006182.01 | 0.837742 | 4.344096e-57 | 5.696631e-54 |
| MsG0180004705.01 | MsG0180006182.01 | 0.848218 | 7.052076e-60 | 1.284835e-56 |
| MsG0180004737.01 | MsG0180006182.01 | -0.803987 | 2.681750e-49 | 1.366854e-46 |
| MsG0180005096.01 | MsG0180006182.01 | 0.808590 | 2.874475e-50 | 1.650028e-47 |
| MsG0180005272.01 | MsG0180006182.01 | 0.834102 | 3.638229e-56 | 4.274288e-53 |
| MsG0180005369.01 | MsG0180006182.01 | -0.806147 | 9.471061e-50 | 5.102691e-47 |
| MsG0180005667.01 | MsG0180006182.01 | 0.830978 | 2.165810e-55 | 2.318456e-52 |
| MsG0180005757.01 | MsG0180006182.01 | 0.810587 | 1.070512e-50 | 6.478598e-48 |
| MsG0180006026.01 | MsG0180006182.01 | 0.858802 | 6.416584e-63 | 1.657826e-59 |
| MsG0180006076.01 | MsG0180006182.01 | -0.844000 | 9.909090e-59 | 1.578035e-55 |
| MsG0180006182.01 | MsG0180006191.01 | 0.878228 | 3.327319e-69 | 1.723811e-65 |
| MsG0180006182.01 | MsG0280006426.01 | 0.815049 | 1.127987e-51 | 7.694324e-49 |
| MsG0180006182.01 | MsG0280006884.01 | 0.821613 | 3.678678e-53 | 3.007403e-50 |
| MsG0180006182.01 | MsG0280007281.01 | 0.828647 | 8.003370e-55 | 8.003505e-52 |
| MsG0180006182.01 | MsG0280007419.01 | 0.892657 | 1.297320e-74 | 1.197022e-70 |
| MsG0180006182.01 | MsG0280007667.01 | 0.845409 | 4.134846e-59 | 6.884313e-56 |
| MsG0180006182.01 | MsG0280007786.01 | 0.835213 | 1.913144e-56 | 2.323883e-53 |
| MsG0180006182.01 | MsG0280007983.01 | 0.803496 | 3.391563e-49 | 1.706885e-46 |
| MsG0180006182.01 | MsG0280008235.01 | 0.807958 | 3.918785e-50 | 2.212544e-47 |
| MsG0180006182.01 | MsG0280008407.01 | 0.831702 | 1.437265e-55 | 1.572096e-52 |
| MsG0180006182.01 | MsG0280008692.01 | 0.834267 | 3.309328e-56 | 3.907293e-53 |
| MsG0180006182.01 | MsG0280009241.01 | 0.858309 | 8.999588e-63 | 2.287011e-59 |
| MsG0180006182.01 | MsG0280009521.01 | 0.801834 | 7.468789e-49 | 3.602739e-46 |
| MsG0180006182.01 | MsG0280009526.01 | 0.801697 | 7.966594e-49 | 3.829428e-46 |
| MsG0180006182.01 | MsG0280010240.01 | 0.822700 | 2.058238e-53 | 1.735714e-50 |
| MsG0180006182.01 | MsG0280011269.01 | 0.803833 | 2.886845e-49 | 1.465536e-46 |
| MsG0180006182.01 | MsG0380011846.01 | 0.815414 | 9.358962e-52 | 6.448111e-49 |
| MsG0180006182.01 | MsG0380012818.01 | 0.838234 | 3.245224e-57 | 4.319203e-54 |
| MsG0180006182.01 | MsG0380013041.01 | 0.904855 | 7.930121e-80 | 1.249824e-75 |
| MsG0180006182.01 | MsG0380014735.01 | -0.815274 | 1.005400e-51 | 6.900589e-49 |
| MsG0180006182.01 | MsG0380014807.01 | 0.803435 | 3.491105e-49 | 1.754206e-46 |
| MsG0180006182.01 | MsG0380015371.01 | 0.802115 | 6.537422e-49 | 3.176052e-46 |
| MsG0180006182.01 | MsG0380015434.01 | 0.826986 | 2.006779e-54 | 1.911969e-51 |
| MsG0180006182.01 | MsG0380015518.01 | 0.808409 | 3.142237e-50 | 1.795291e-47 |
| MsG0180006182.01 | MsG0380015828.01 | -0.804148 | 2.481972e-49 | 1.270244e-46 |
| MsG0180006182.01 | MsG0380015871.01 | 0.846299 | 2.370487e-59 | 4.061491e-56 |
| MsG0180006182.01 | MsG0380016051.01 | 0.808101 | 3.654081e-50 | 2.070871e-47 |
| MsG0180006182.01 | MsG0380016065.01 | -0.802233 | 6.183636e-49 | 3.013246e-46 |
| MsG0180006182.01 | MsG0380016110.01 | 0.842737 | 2.153781e-58 | 3.295891e-55 |
| MsG0180006182.01 | MsG0380016112.01 | 0.838824 | 2.286294e-57 | 3.098470e-54 |
| MsG0180006182.01 | MsG0380016143.01 | 0.825810 | 3.827025e-54 | 3.525583e-51 |
| MsG0180006182.01 | MsG0380016449.01 | 0.816873 | 4.419026e-52 | 3.168898e-49 |
| MsG0180006182.01 | MsG0380016485.01 | 0.838115 | 3.482926e-57 | 4.619049e-54 |
| MsG0180006182.01 | MsG0380016567.01 | 0.814538 | 1.464417e-51 | 9.852744e-49 |
| MsG0180006182.01 | MsG0380016865.01 | 0.827854 | 1.243234e-54 | 1.214872e-51 |
| MsG0180006182.01 | MsG0380017030.01 | 0.823641 | 1.241591e-53 | 1.075259e-50 |
| MsG0180006182.01 | MsG0380017091.01 | 0.802252 | 6.127640e-49 | 2.987481e-46 |
| MsG0180006182.01 | MsG0380017231.01 | 0.805333 | 1.403943e-49 | 7.407611e-47 |
| MsG0180006182.01 | MsG0380017240.01 | 0.841040 | 6.045553e-58 | 8.773310e-55 |
| MsG0180006182.01 | MsG0380017588.01 | 0.816108 | 6.554638e-52 | 4.602821e-49 |
| MsG0180006182.01 | MsG0380017730.01 | 0.800139 | 1.657614e-48 | 7.660141e-46 |
| MsG0180006182.01 | MsG0380017898.01 | 0.848058 | 7.805140e-60 | 1.414716e-56 |
| MsG0180006182.01 | MsG0380017967.01 | 0.803763 | 2.984400e-49 | 1.512338e-46 |
| MsG0180006182.01 | MsG0380017989.01 | 0.832476 | 9.248088e-56 | 1.034855e-52 |
| MsG0180006182.01 | MsG0380017992.01 | 0.826731 | 2.310177e-54 | 2.184636e-51 |
| MsG0180006182.01 | MsG0380017997.01 | 0.862607 | 4.496891e-64 | 1.324646e-60 |
| MsG0180006182.01 | MsG0380018004.01 | 0.815205 | 1.041375e-51 | 7.133651e-49 |
| MsG0180006182.01 | MsG0380018007.01 | 0.821704 | 3.504609e-53 | 2.872705e-50 |
| MsG0180006182.01 | MsG0480018767.01 | 0.837300 | 5.639017e-57 | 7.293334e-54 |
| MsG0180006182.01 | MsG0480019247.01 | -0.809734 | 1.634589e-50 | 9.673207e-48 |
| MsG0180006182.01 | MsG0480019588.01 | 0.810759 | 9.823685e-51 | 5.972839e-48 |
| MsG0180006182.01 | MsG0480019935.01 | 0.839174 | 1.855444e-57 | 2.541479e-54 |
| MsG0180006182.01 | MsG0480020537.01 | 0.801123 | 1.044653e-48 | 4.949509e-46 |
| MsG0180006182.01 | MsG0480021433.01 | 0.820091 | 8.236770e-53 | 6.455736e-50 |
| MsG0180006182.01 | MsG0480021931.01 | 0.811906 | 5.538438e-51 | 3.470924e-48 |
| MsG0180006182.01 | MsG0480021977.01 | 0.814550 | 1.455025e-51 | 9.793061e-49 |
| MsG0180006182.01 | MsG0480022242.01 | -0.810413 | 1.166928e-50 | 7.029249e-48 |
| MsG0180006182.01 | MsG0480022407.01 | 0.829084 | 6.273573e-55 | 6.354099e-52 |
| MsG0180006182.01 | MsG0480022428.01 | 0.820040 | 8.462475e-53 | 6.622917e-50 |
| MsG0180006182.01 | MsG0480023064.01 | 0.829204 | 5.867118e-55 | 5.964482e-52 |
| MsG0180006182.01 | MsG0480023195.01 | 0.811328 | 7.396718e-51 | 4.565061e-48 |
| MsG0180006182.01 | MsG0480023244.01 | -0.825296 | 5.065928e-54 | 4.598903e-51 |
| MsG0180006182.01 | MsG0480023322.01 | 0.851750 | 7.240198e-61 | 1.480131e-57 |
| MsG0180006182.01 | MsG0480023324.01 | 0.872226 | 3.743483e-67 | 1.554132e-63 |
| MsG0180006182.01 | MsG0480023484.01 | 0.823848 | 1.110265e-53 | 9.671748e-51 |
| MsG0180006182.01 | MsG0480023546.01 | 0.811366 | 7.256004e-51 | 4.482925e-48 |
| MsG0180006182.01 | MsG0480023706.01 | 0.821640 | 3.626172e-53 | 2.966808e-50 |
| MsG0180006182.01 | MsG0480023944.01 | 0.852118 | 5.694281e-61 | 1.177788e-57 |
| MsG0180006182.01 | MsG0580024119.01 | 0.804776 | 1.836365e-49 | 9.551602e-47 |
| MsG0180006182.01 | MsG0580024388.01 | 0.800148 | 1.651175e-48 | 7.631778e-46 |
| MsG0180006182.01 | MsG0580024707.01 | 0.800640 | 1.311120e-48 | 6.136269e-46 |
| MsG0180006182.01 | MsG0580024954.01 | 0.816872 | 4.420097e-52 | 3.169599e-49 |
| MsG0180006182.01 | MsG0580025056.01 | 0.809334 | 1.992389e-50 | 1.166557e-47 |
| MsG0180006182.01 | MsG0580025093.01 | 0.825380 | 4.837751e-54 | 4.402160e-51 |
| MsG0180006182.01 | MsG0580025153.01 | -0.864192 | 1.451592e-64 | 4.518242e-61 |
| MsG0180006182.01 | MsG0580025385.01 | 0.850919 | 1.243273e-60 | 2.474127e-57 |
| MsG0180006182.01 | MsG0580025464.01 | 0.894017 | 3.659779e-75 | 3.573455e-71 |
| MsG0180006182.01 | MsG0580025486.01 | -0.801930 | 7.137823e-49 | 3.451427e-46 |
| MsG0180006182.01 | MsG0580025620.01 | 0.840355 | 9.142920e-58 | 1.298926e-54 |
| MsG0180006182.01 | MsG0580025633.01 | 0.803169 | 3.963473e-49 | 1.978051e-46 |
| MsG0180006182.01 | MsG0580025746.01 | 0.828626 | 8.099559e-55 | 8.094659e-52 |
| MsG0180006182.01 | MsG0580025822.01 | 0.810187 | 1.305574e-50 | 7.817684e-48 |
| MsG0180006182.01 | MsG0580026027.01 | 0.813889 | 2.036925e-51 | 1.346582e-48 |
| MsG0180006182.01 | MsG0580028302.01 | 0.837954 | 3.831709e-57 | 5.057353e-54 |
| MsG0180006182.01 | MsG0580028330.01 | 0.840775 | 7.095493e-58 | 1.021352e-54 |
| MsG0180006182.01 | MsG0580028364.01 | 0.809579 | 1.765163e-50 | 1.040309e-47 |
| MsG0180006182.01 | MsG0580028565.01 | 0.842346 | 2.735733e-58 | 4.136155e-55 |
| MsG0180006182.01 | MsG0580028927.01 | 0.805753 | 1.146166e-49 | 6.113597e-47 |
| MsG0180006182.01 | MsG0580029696.01 | 0.843101 | 1.723605e-58 | 2.667898e-55 |
| MsG0180006182.01 | MsG0580029751.01 | -0.813564 | 2.400874e-51 | 1.573261e-48 |
| MsG0180006182.01 | MsG0580030179.01 | 0.893538 | 5.725630e-75 | 5.477065e-71 |
| MsG0180006182.01 | MsG0680030296.01 | 0.841028 | 6.091820e-58 | 8.836863e-55 |
| MsG0180006182.01 | MsG0680030628.01 | 0.827122 | 1.862711e-54 | 1.781665e-51 |
| MsG0180006182.01 | MsG0680031616.01 | 0.839415 | 1.606760e-57 | 2.217399e-54 |
| MsG0180006182.01 | MsG0680031686.01 | 0.848315 | 6.627855e-60 | 1.211480e-56 |
| MsG0180006182.01 | MsG0680034415.01 | 0.864696 | 1.009785e-64 | 3.199430e-61 |
| MsG0180006182.01 | MsG0680035584.01 | -0.823874 | 1.095233e-53 | 9.547550e-51 |
| MsG0180006182.01 | MsG0680035781.01 | 0.818438 | 1.959697e-52 | 1.467072e-49 |
| MsG0180006182.01 | MsG0780036480.01 | 0.827215 | 1.769303e-54 | 1.697051e-51 |
| MsG0180006182.01 | MsG0780036793.01 | 0.801007 | 1.103376e-48 | 5.212668e-46 |
| MsG0180006182.01 | MsG0780036890.01 | 0.811723 | 6.071377e-51 | 3.786604e-48 |
| MsG0180006182.01 | MsG0780037232.01 | 0.822051 | 2.912362e-53 | 2.410756e-50 |
| MsG0180006182.01 | MsG0780038305.01 | 0.818889 | 1.548264e-52 | 1.173548e-49 |
| MsG0180006182.01 | MsG0780038307.01 | 0.812901 | 3.357059e-51 | 2.160695e-48 |
| MsG0180006182.01 | MsG0780038393.01 | 0.859054 | 5.390845e-63 | 1.404860e-59 |
| MsG0180006182.01 | MsG0780038810.01 | 0.874921 | 4.628162e-68 | 2.121398e-64 |
| MsG0180006182.01 | MsG0780039303.01 | 0.802429 | 5.633114e-49 | 2.758886e-46 |
| MsG0180006182.01 | MsG0780039642.01 | 0.832619 | 8.525375e-56 | 9.580537e-53 |
| MsG0180006182.01 | MsG0780039916.01 | 0.859059 | 5.373757e-63 | 1.400633e-59 |
| MsG0180006182.01 | MsG0780039917.01 | 0.822938 | 1.812042e-53 | 1.538415e-50 |
| MsG0180006182.01 | MsG0780040021.01 | 0.834026 | 3.801027e-56 | 4.455346e-53 |
| MsG0180006182.01 | MsG0780040118.01 | 0.871539 | 6.330111e-67 | 2.562743e-63 |
| MsG0180006182.01 | MsG0780040119.01 | 0.813665 | 2.281600e-51 | 1.499215e-48 |
| MsG0180006182.01 | MsG0780040139.01 | 0.844297 | 8.250069e-59 | 1.326004e-55 |
| MsG0180006182.01 | MsG0780040266.01 | 0.806188 | 9.284471e-50 | 5.007612e-47 |
| MsG0180006182.01 | MsG0780040276.01 | 0.830130 | 3.493064e-55 | 3.647536e-52 |
| MsG0180006182.01 | MsG0780040364.01 | 0.855035 | 8.264788e-62 | 1.882616e-58 |
| MsG0180006182.01 | MsG0780040460.01 | 0.812934 | 3.302671e-51 | 2.127400e-48 |
| MsG0180006182.01 | MsG0780040560.01 | 0.816140 | 6.448027e-52 | 4.531935e-49 |
| MsG0180006182.01 | MsG0780040564.01 | 0.874088 | 8.872748e-68 | 3.941516e-64 |
| MsG0180006182.01 | MsG0780040978.01 | 0.839077 | 1.965799e-57 | 2.684755e-54 |
| MsG0180006182.01 | MsG0780040990.01 | 0.857568 | 1.494114e-62 | 3.703794e-59 |
| MsG0180006182.01 | MsG0780041180.01 | 0.878969 | 1.825796e-69 | 9.724888e-66 |
| MsG0180006182.01 | MsG0780041206.01 | 0.804151 | 2.478871e-49 | 1.268748e-46 |
| MsG0180006182.01 | MsG0780041303.01 | 0.824433 | 8.093673e-54 | 7.167546e-51 |
| MsG0180006182.01 | MsG0780041363.01 | 0.892366 | 1.696708e-74 | 1.546267e-70 |
| MsG0180006182.01 | MsG0780041437.01 | 0.825507 | 4.513281e-54 | 4.121846e-51 |
| MsG0180006182.01 | MsG0780041439.01 | 0.800236 | 1.584015e-48 | 7.337963e-46 |
| MsG0180006182.01 | MsG0780041548.01 | 0.817164 | 3.800120e-52 | 2.746765e-49 |
| MsG0180006182.01 | MsG0780041591.01 | 0.815203 | 1.042648e-51 | 7.141953e-49 |
| MsG0180006182.01 | MsG0880042122.01 | 0.847529 | 1.091404e-59 | 1.945794e-56 |
| MsG0180006182.01 | MsG0880042541.01 | 0.804361 | 2.241471e-49 | 1.153428e-46 |
| MsG0180006182.01 | MsG0880042635.01 | 0.846212 | 2.502848e-59 | 4.276019e-56 |
| MsG0180006182.01 | MsG0880042927.01 | 0.809223 | 2.103712e-50 | 1.228137e-47 |
| MsG0180006182.01 | MsG0880042930.01 | 0.801377 | 9.266239e-49 | 4.418414e-46 |
| MsG0180006182.01 | MsG0880043550.01 | 0.813541 | 2.429078e-51 | 1.590795e-48 |
| MsG0180006182.01 | MsG0880043684.01 | 0.801158 | 1.027404e-48 | 4.872129e-46 |
| MsG0180006182.01 | MsG0880043961.01 | 0.818736 | 1.677980e-52 | 1.266381e-49 |
| MsG0180006182.01 | MsG0880043983.01 | 0.810811 | 9.575135e-51 | 5.829476e-48 |
| MsG0180006182.01 | MsG0880043989.01 | 0.821360 | 4.207650e-53 | 3.415706e-50 |
| MsG0180006182.01 | MsG0880044688.01 | 0.813088 | 3.055239e-51 | 1.976183e-48 |
| MsG0180006182.01 | MsG0880044803.01 | 0.804426 | 2.172401e-49 | 1.119706e-46 |
| MsG0180006182.01 | MsG0880044984.01 | 0.819493 | 1.128404e-52 | 8.697036e-50 |
| MsG0180006182.01 | MsG0880045439.01 | 0.842381 | 2.677309e-58 | 4.052430e-55 |
| MsG0180006182.01 | MsG0880045503.01 | 0.845540 | 3.811441e-59 | 6.372579e-56 |
| MsG0180006182.01 | MsG0880045584.01 | 0.841527 | 4.501667e-58 | 6.632964e-55 |
| MsG0180006182.01 | MsG0880045703.01 | -0.807968 | 3.899437e-50 | 2.202162e-47 |
| MsG0180006182.01 | MsG0880045852.01 | 0.870782 | 1.124888e-66 | 4.430417e-63 |
| MsG0180006182.01 | MsG0880045949.01 | 0.811417 | 7.074202e-51 | 4.376597e-48 |
| MsG0180006182.01 | MsG0880045963.01 | 0.880002 | 7.854943e-70 | 4.353573e-66 |
| MsG0180006182.01 | MsG0880045989.01 | 0.850221 | 1.953085e-60 | 3.798910e-57 |
| MsG0180006182.01 | MsG0880046010.01 | -0.809508 | 1.827998e-50 | 1.075255e-47 |
| MsG0180006182.01 | MsG0880046137.01 | 0.857669 | 1.394773e-62 | 3.469415e-59 |
| MsG0180006182.01 | MsG0880046337.01 | 0.847734 | 9.588749e-60 | 1.720563e-56 |
| MsG0180006182.01 | MsG0880046906.01 | 0.808988 | 2.363239e-50 | 1.370887e-47 |
| MsG0180006182.01 | MsG0880046945.01 | 0.847851 | 8.900409e-60 | 1.602931e-56 |
| MsG0180006182.01 | MsG0880047057.01 | 0.817401 | 3.361368e-52 | 2.445481e-49 |
| MsG0180006182.01 | MsG0880047331.01 | 0.806669 | 7.352534e-50 | 4.014156e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006182.01.T01 | MTR_1g115475 | 54.373 | 263 | 33 | 4 | 1 | 188 | 27 | 277 | 1.98e-78 | 243 |
| MsG0180006182.01.T01 | MTR_7g023060 | 50.355 | 141 | 39 | 7 | 1 | 110 | 32 | 172 | 3.78e-28 | 110 |
| MsG0180006182.01.T01 | MTR_7g023060 | 53.846 | 78 | 24 | 1 | 111 | 188 | 234 | 299 | 1.08e-20 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006182.01.T01 | AT3G55260 | 37.175 | 269 | 72 | 8 | 5 | 188 | 26 | 282 | 3.08e-40 | 143 |
| MsG0180006182.01.T01 | AT1G65590 | 48.718 | 78 | 28 | 2 | 111 | 188 | 214 | 279 | 1.83e-15 | 73.9 |
Find 33 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAACCTTTCCACAAATT+TGG | 0.129985 | 1:-101073852 | None:intergenic |
| AGATATCTCACCTCTCATTT+TGG | 0.191313 | 1:-101074027 | None:intergenic |
| GTTTCAAAAGCTACAGGTTC+TGG | 0.237495 | 1:+101071844 | MsG0180006182.01.T01:CDS |
| ATCATTCTCTTCCATTCATT+TGG | 0.258348 | 1:+101071482 | MsG0180006182.01.T01:CDS |
| TGGTGCGTTGCGGGGATTAG+AGG | 0.346302 | 1:+101072314 | MsG0180006182.01.T01:CDS |
| TATTGCTGTGGTTTATCAAC+AGG | 0.358013 | 1:+101074129 | MsG0180006182.01.T01:CDS |
| CATGAAAAGACAACAGTGTT+AGG | 0.390986 | 1:-101073974 | None:intergenic |
| TGATGAAGAAGCACCATTGC+CGG | 0.418225 | 1:-101071569 | None:intergenic |
| TTTCAAAAGCTACAGGTTCT+GGG | 0.419195 | 1:+101071845 | MsG0180006182.01.T01:CDS |
| TACCTACATATCCAAATTTG+TGG | 0.429782 | 1:+101073841 | MsG0180006182.01.T01:CDS |
| TTCAAGAACAGTTACAGCTT+TGG | 0.429993 | 1:+101071631 | MsG0180006182.01.T01:CDS |
| CTCCCTGCAAAATTCACATT+CGG | 0.447589 | 1:+101071508 | MsG0180006182.01.T01:CDS |
| TCTTCATCAATTGTTCGAGC+TGG | 0.447666 | 1:+101071583 | MsG0180006182.01.T01:CDS |
| TTCCACAAATTTGGATATGT+AGG | 0.465834 | 1:-101073843 | None:intergenic |
| TTGTTTGTTTCAAAAGCTAC+AGG | 0.470106 | 1:+101071838 | MsG0180006182.01.T01:CDS |
| GCAGGGAGAGGCCAAATGAA+TGG | 0.471748 | 1:-101071493 | None:intergenic |
| TACCATGATTCTGCATGACC+AGG | 0.490655 | 1:-101074180 | None:intergenic |
| TCCCTGGTCATGCAGAATCA+TGG | 0.492382 | 1:+101074178 | MsG0180006182.01.T01:CDS |
| AATGAAAGTTTCTATTGCTG+TGG | 0.548773 | 1:+101074117 | MsG0180006182.01.T01:intron |
| ACATATCCAAATTTGTGGAA+AGG | 0.549309 | 1:+101073846 | MsG0180006182.01.T01:CDS |
| TTTGTGTTGCAGCTTCAACT+TGG | 0.549499 | 1:+101071796 | MsG0180006182.01.T01:intron |
| ATCAACAGGCATAAATGTCA+TGG | 0.577453 | 1:+101074143 | MsG0180006182.01.T01:CDS |
| CATAAATGTCATGGCAGAAG+TGG | 0.582721 | 1:+101074152 | MsG0180006182.01.T01:CDS |
| GAGTGAAAGTGATGGATCAA+TGG | 0.586733 | 1:-101071545 | None:intergenic |
| GTTGCAGCTTCAACTTGGAG+TGG | 0.587513 | 1:+101071801 | MsG0180006182.01.T01:intron |
| TTCTGGGAAAGTGACAATTG+AGG | 0.591843 | 1:+101071861 | MsG0180006182.01.T01:CDS |
| TCACTTTCACTCACCGGCAA+TGG | 0.591903 | 1:+101071556 | MsG0180006182.01.T01:CDS |
| GGATATGTAGGTACTTCAAG+TGG | 0.605652 | 1:-101073831 | None:intergenic |
| ACCATGATTCTGCATGACCA+GGG | 0.617592 | 1:-101074179 | None:intergenic |
| GATCCATCACTTTCACTCAC+CGG | 0.619209 | 1:+101071550 | MsG0180006182.01.T01:CDS |
| ATGGCAGAAGTGGATGTCCC+TGG | 0.625492 | 1:+101074162 | MsG0180006182.01.T01:CDS |
| TTGCCGGTGAGTGAAAGTGA+TGG | 0.677033 | 1:-101071553 | None:intergenic |
| ATGAATGGAAGAGAATGATG+TGG | 0.730480 | 1:-101071478 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAATAAGTATTTTTTTT+GGG | + | Chr1:101073017-101073036 | MsG0180006182.01.T01:intron | 10.0% |
| !!! | TTCAAAATAAGTATTTTTTT+TGG | + | Chr1:101073016-101073035 | MsG0180006182.01.T01:intron | 10.0% |
| !! | AAAATGGAAACAAAAATAAT+TGG | + | Chr1:101072172-101072191 | MsG0180006182.01.T01:intron | 15.0% |
| !! | ATTTCATAAATAATCGAAAT+GGG | + | Chr1:101072949-101072968 | MsG0180006182.01.T01:intron | 15.0% |
| !! | GATGAAATTATAATCTTAAT+CGG | - | Chr1:101073113-101073132 | None:intergenic | 15.0% |
| !! | TATTTCATAAATAATCGAAA+TGG | + | Chr1:101072948-101072967 | MsG0180006182.01.T01:intron | 15.0% |
| !!! | CCATAATTATTTAGAATATA+GGG | - | Chr1:101072380-101072399 | None:intergenic | 15.0% |
| !!! | TCCATAATTATTTAGAATAT+AGG | - | Chr1:101072381-101072400 | None:intergenic | 15.0% |
| !!! | TTATTTTGAAGAGTAAAAAT+TGG | - | Chr1:101073006-101073025 | None:intergenic | 15.0% |
| !! | AAAAGAAATTACAACAACAA+AGG | - | Chr1:101071989-101072008 | None:intergenic | 20.0% |
| !! | AAAGAAATTACAACAACAAA+GGG | - | Chr1:101071988-101072007 | None:intergenic | 20.0% |
| !! | AAATAATTATGGACTTTGAA+GGG | + | Chr1:101072388-101072407 | MsG0180006182.01.T01:intron | 20.0% |
| !! | AACATAAAAGAAAACATCAT+CGG | - | Chr1:101071938-101071957 | None:intergenic | 20.0% |
| !! | AATAATCAAAAGAACACAAT+TGG | - | Chr1:101073380-101073399 | None:intergenic | 20.0% |
| !! | AATGACTGAAACAAATAATA+TGG | + | Chr1:101072239-101072258 | MsG0180006182.01.T01:intron | 20.0% |
| !! | CCCTATATTCTAAATAATTA+TGG | + | Chr1:101072377-101072396 | MsG0180006182.01.T01:intron | 20.0% |
| !! | TAAAACAGTACAAATATACA+AGG | + | Chr1:101073404-101073423 | MsG0180006182.01.T01:intron | 20.0% |
| !! | TAAATAATTATGGACTTTGA+AGG | + | Chr1:101072387-101072406 | MsG0180006182.01.T01:intron | 20.0% |
| !! | TATTGTGTTTCATTTCTTAT+TGG | + | Chr1:101072146-101072165 | MsG0180006182.01.T01:intron | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | + | Chr1:101072842-101072861 | MsG0180006182.01.T01:intron | 20.0% |
| !! | TGATATTTATCTTACAAGTT+TGG | - | Chr1:101073652-101073671 | None:intergenic | 20.0% |
| !! | TTTCATAAATAATCGAAATG+GGG | + | Chr1:101072950-101072969 | MsG0180006182.01.T01:intron | 20.0% |
| !!! | TTTGTGATTTTTTTTAATGC+AGG | + | Chr1:101072278-101072297 | MsG0180006182.01.T01:intron | 20.0% |
| ! | AATGACTTAAAGCAATTTAG+AGG | - | Chr1:101073179-101073198 | None:intergenic | 25.0% |
| ! | CAAGTCAATTTCAAGAAATT+TGG | - | Chr1:101072116-101072135 | None:intergenic | 25.0% |
| ! | GTTTAGATACTACATATTTC+TGG | + | Chr1:101072972-101072991 | MsG0180006182.01.T01:intron | 25.0% |
| ! | TAAGTCAAATATAACTCGAA+AGG | - | Chr1:101073314-101073333 | None:intergenic | 25.0% |
| ! | TATGAAATAGAAGCTTCAAA+AGG | - | Chr1:101074060-101074079 | None:intergenic | 25.0% |
| !! | AGTTCAGTTTTCATTTTCAT+GGG | - | Chr1:101073247-101073266 | None:intergenic | 25.0% |
| !! | GCCAATATATTTTGTAAAAG+AGG | + | Chr1:101073485-101073504 | MsG0180006182.01.T01:intron | 25.0% |
| !! | GCCTCTTTTACAAAATATAT+TGG | - | Chr1:101073489-101073508 | None:intergenic | 25.0% |
| !! | TGATACGCAAATATTTTACA+TGG | + | Chr1:101073766-101073785 | MsG0180006182.01.T01:intron | 25.0% |
| !! | TTTCTTTTTACTTCTCTCTT+TGG | + | Chr1:101073676-101073695 | MsG0180006182.01.T01:intron | 25.0% |
| !!! | AAAGTTTTCATTTTGAGATC+AGG | + | Chr1:101071767-101071786 | MsG0180006182.01.T01:intron | 25.0% |
| !!! | TTATAGCAAACTTGTTGTAT+GGG | + | Chr1:101072463-101072482 | MsG0180006182.01.T01:intron | 25.0% |
| !!! | TTTATAGCAAACTTGTTGTA+TGG | + | Chr1:101072462-101072481 | MsG0180006182.01.T01:intron | 25.0% |
| !!! | TTTATTTTGCAGATACATCT+AGG | + | Chr1:101073574-101073593 | MsG0180006182.01.T01:intron | 25.0% |
| AAAAGAGGCAACTCTATATT+TGG | + | Chr1:101073500-101073519 | MsG0180006182.01.T01:intron | 30.0% | |
| AAAGCAATTTAGAGGTAATG+AGG | - | Chr1:101073171-101073190 | None:intergenic | 30.0% | |
| AATGAAAGTTTCTATTGCTG+TGG | + | Chr1:101074117-101074136 | MsG0180006182.01.T01:intron | 30.0% | |
| ACATATCCAAATTTGTGGAA+AGG | + | Chr1:101073846-101073865 | MsG0180006182.01.T01:CDS | 30.0% | |
| ATCATTCTCTTCCATTCATT+TGG | + | Chr1:101071482-101071501 | MsG0180006182.01.T01:CDS | 30.0% | |
| ATCTGCTTAATTACATCAAC+TGG | - | Chr1:101073609-101073628 | None:intergenic | 30.0% | |
| ATTAAGCGTAATAGAGATGA+AGG | + | Chr1:101072523-101072542 | MsG0180006182.01.T01:intron | 30.0% | |
| CATATGAAGACAGAGAAAAA+CGG | + | Chr1:101072775-101072794 | MsG0180006182.01.T01:intron | 30.0% | |
| CATTTCTTATTGGTGGAAAA+TGG | + | Chr1:101072156-101072175 | MsG0180006182.01.T01:intron | 30.0% | |
| CTGGGAAATCATCATAAAAA+GGG | - | Chr1:101073349-101073368 | None:intergenic | 30.0% | |
| GAAAGGTTCATATACAAAGT+GGG | + | Chr1:101073863-101073882 | MsG0180006182.01.T01:intron | 30.0% | |
| GGGTACAATCTTCATATATA+AGG | + | Chr1:101073037-101073056 | MsG0180006182.01.T01:intron | 30.0% | |
| TACCTACATATCCAAATTTG+TGG | + | Chr1:101073841-101073860 | MsG0180006182.01.T01:CDS | 30.0% | |
| TATATGTGATCAGATTCACA+AGG | + | Chr1:101072582-101072601 | MsG0180006182.01.T01:intron | 30.0% | |
| TATGAACCTTTCCACAAATT+TGG | - | Chr1:101073855-101073874 | None:intergenic | 30.0% | |
| TCTGGGAAATCATCATAAAA+AGG | - | Chr1:101073350-101073369 | None:intergenic | 30.0% | |
| TGGGAAATCATCATAAAAAG+GGG | - | Chr1:101073348-101073367 | None:intergenic | 30.0% | |
| TGTGTTTCATTTCTTATTGG+TGG | + | Chr1:101072149-101072168 | MsG0180006182.01.T01:intron | 30.0% | |
| TGTTCATTCCAAAAATGAAG+AGG | + | Chr1:101071703-101071722 | MsG0180006182.01.T01:intron | 30.0% | |
| TTCCACAAATTTGGATATGT+AGG | - | Chr1:101073846-101073865 | None:intergenic | 30.0% | |
| TTGTTTGTTTCAAAAGCTAC+AGG | + | Chr1:101071838-101071857 | MsG0180006182.01.T01:CDS | 30.0% | |
| ! | CAGTTCAGTTTTCATTTTCA+TGG | - | Chr1:101073248-101073267 | None:intergenic | 30.0% |
| ! | CATGGTAGAATGTTTTACAT+TGG | + | Chr1:101073784-101073803 | MsG0180006182.01.T01:intron | 30.0% |
| ! | GTGTGAATTTCAAGTGTTTA+TGG | + | Chr1:101071961-101071980 | MsG0180006182.01.T01:intron | 30.0% |
| ! | TAAAGCTTTTCCAAAATGAG+AGG | + | Chr1:101074017-101074036 | MsG0180006182.01.T01:CDS | 30.0% |
| ! | TGATTGATGTGTTCTGTTTT+TGG | + | Chr1:101072085-101072104 | MsG0180006182.01.T01:intron | 30.0% |
| !! | AAGTTTTATCCCACTAAATG+GGG | - | Chr1:101072891-101072910 | None:intergenic | 30.0% |
| !! | CAAGTTTTATCCCACTAAAT+GGG | - | Chr1:101072892-101072911 | None:intergenic | 30.0% |
| !! | GATTGATGTGTTCTGTTTTT+GGG | + | Chr1:101072086-101072105 | MsG0180006182.01.T01:intron | 30.0% |
| !! | TTATCTTACAAGTTTGGTGT+AGG | - | Chr1:101073646-101073665 | None:intergenic | 30.0% |
| !!! | GCTGGTTTTGATAGATATAA+AGG | + | Chr1:101071601-101071620 | MsG0180006182.01.T01:CDS | 30.0% |
| AAGGTTTGCATTTCTCCATA+TGG | + | Chr1:101073056-101073075 | MsG0180006182.01.T01:intron | 35.0% | |
| AATCATCATAAAAAGGGGGA+TGG | - | Chr1:101073343-101073362 | None:intergenic | 35.0% | |
| AGGCTATTGACACATATCTT+TGG | + | Chr1:101073547-101073566 | MsG0180006182.01.T01:intron | 35.0% | |
| ATCAACAGGCATAAATGTCA+TGG | + | Chr1:101074143-101074162 | MsG0180006182.01.T01:CDS | 35.0% | |
| ATGAATGGAAGAGAATGATG+TGG | - | Chr1:101071481-101071500 | None:intergenic | 35.0% | |
| CATGAAAAGACAACAGTGTT+AGG | - | Chr1:101073977-101073996 | None:intergenic | 35.0% | |
| CATTCCAAAAATGAAGAGGT+GGG | + | Chr1:101071707-101071726 | MsG0180006182.01.T01:intron | 35.0% | |
| CCATTTAGTGGGATAAAACT+TGG | + | Chr1:101072890-101072909 | MsG0180006182.01.T01:intron | 35.0% | |
| CGCTTAATTTATTCTCGTGT+TGG | - | Chr1:101072511-101072530 | None:intergenic | 35.0% | |
| GGAAAGGTTCATATACAAAG+TGG | + | Chr1:101073862-101073881 | MsG0180006182.01.T01:intron | 35.0% | |
| GGGAAATCATCATAAAAAGG+GGG | - | Chr1:101073347-101073366 | None:intergenic | 35.0% | |
| GGTATACATGAAAATAGCTG+TGG | - | Chr1:101073092-101073111 | None:intergenic | 35.0% | |
| TATTGCTGTGGTTTATCAAC+AGG | + | Chr1:101074129-101074148 | MsG0180006182.01.T01:CDS | 35.0% | |
| TCATTCCAAAAATGAAGAGG+TGG | + | Chr1:101071706-101071725 | MsG0180006182.01.T01:intron | 35.0% | |
| TGTTCATATGCAGTGATCTA+AGG | + | Chr1:101073527-101073546 | MsG0180006182.01.T01:intron | 35.0% | |
| TTCAAGAACAGTTACAGCTT+TGG | + | Chr1:101071631-101071650 | MsG0180006182.01.T01:CDS | 35.0% | |
| TTTCAAAAGCTACAGGTTCT+GGG | + | Chr1:101071845-101071864 | MsG0180006182.01.T01:CDS | 35.0% | |
| ! | AGATATCTCACCTCTCATTT+TGG | - | Chr1:101074030-101074049 | None:intergenic | 35.0% |
| ! | ATGCAGGCAAATACTGTTTT+TGG | + | Chr1:101072294-101072313 | MsG0180006182.01.T01:intron | 35.0% |
| ! | GAATGTTTTACATTGGCACA+TGG | + | Chr1:101073791-101073810 | MsG0180006182.01.T01:intron | 35.0% |
| ! | TAATTATGGACTTTGAAGGG+AGG | + | Chr1:101072391-101072410 | MsG0180006182.01.T01:intron | 35.0% |
| ! | TACAAATATACAAGGCACCA+TGG | + | Chr1:101073412-101073431 | MsG0180006182.01.T01:intron | 35.0% |
| ! | TGTGGATTTTGTCAACCATA+TGG | - | Chr1:101073074-101073093 | None:intergenic | 35.0% |
| !! | ATAGCAAAGTGTGCTAGTTT+TGG | - | Chr1:101073733-101073752 | None:intergenic | 35.0% |
| !! | CCAAGTTTTATCCCACTAAA+TGG | - | Chr1:101072893-101072912 | None:intergenic | 35.0% |
| !! | GAGTTGGCTTTATCAATCTA+AGG | + | Chr1:101073948-101073967 | MsG0180006182.01.T01:intron | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+CGG | + | Chr1:101072663-101072682 | MsG0180006182.01.T01:intron | 35.0% |
| !!! | AGCTTTGGTTTTCTTAGAAC+AGG | + | Chr1:101071646-101071665 | MsG0180006182.01.T01:CDS | 35.0% |
| AAGATGTTGCATTGGATGTG+TGG | + | Chr1:101072550-101072569 | MsG0180006182.01.T01:intron | 40.0% | |
| AAGGTGACAAGATGTTGCAT+TGG | + | Chr1:101072542-101072561 | MsG0180006182.01.T01:intron | 40.0% | |
| AGTAACGAGAGTAGACTAGA+TGG | + | Chr1:101072730-101072749 | MsG0180006182.01.T01:intron | 40.0% | |
| AGTCCACGAAATGGAAATCT+CGG | - | Chr1:101073453-101073472 | None:intergenic | 40.0% | |
| ATGGAAATCTCGGTTGATCT+CGG | - | Chr1:101073443-101073462 | None:intergenic | 40.0% | |
| CATAAATGTCATGGCAGAAG+TGG | + | Chr1:101074152-101074171 | MsG0180006182.01.T01:CDS | 40.0% | |
| CCATTTCGTGGACTTATGTT+GGG | + | Chr1:101073459-101073478 | MsG0180006182.01.T01:intron | 40.0% | |
| CTCCCTGCAAAATTCACATT+CGG | + | Chr1:101071508-101071527 | MsG0180006182.01.T01:CDS | 40.0% | |
| GCCAACTCAAAGATGTAACA+CGG | - | Chr1:101073936-101073955 | None:intergenic | 40.0% | |
| GGAAAGTGACAATTGAGGTT+TGG | + | Chr1:101071866-101071885 | MsG0180006182.01.T01:intron | 40.0% | |
| GGATATGTAGGTACTTCAAG+TGG | - | Chr1:101073834-101073853 | None:intergenic | 40.0% | |
| GTTTCAAAAGCTACAGGTTC+TGG | + | Chr1:101071844-101071863 | MsG0180006182.01.T01:CDS | 40.0% | |
| TCCATTTCGTGGACTTATGT+TGG | + | Chr1:101073458-101073477 | MsG0180006182.01.T01:intron | 40.0% | |
| TCTTCATCAATTGTTCGAGC+TGG | + | Chr1:101071583-101071602 | MsG0180006182.01.T01:CDS | 40.0% | |
| TGACATTTGATGCATGTAGC+CGG | + | Chr1:101072865-101072884 | MsG0180006182.01.T01:intron | 40.0% | |
| TGTTGTATGGGACAAAGTGT+TGG | + | Chr1:101072475-101072494 | MsG0180006182.01.T01:intron | 40.0% | |
| TTTGTGTTGCAGCTTCAACT+TGG | + | Chr1:101071796-101071815 | MsG0180006182.01.T01:intron | 40.0% | |
| ! | AATGTGAATTTTGCAGGGAG+AGG | - | Chr1:101071508-101071527 | None:intergenic | 40.0% |
| ! | GTAACCCACCTCTTCATTTT+TGG | - | Chr1:101071714-101071733 | None:intergenic | 40.0% |
| ! | GTGACAATTGAGGTTTGGTT+TGG | + | Chr1:101071871-101071890 | MsG0180006182.01.T01:intron | 40.0% |
| ! | GTTGTATGGGACAAAGTGTT+GGG | + | Chr1:101072476-101072495 | MsG0180006182.01.T01:intron | 40.0% |
| ! | TGCCGAATGTGAATTTTGCA+GGG | - | Chr1:101071513-101071532 | None:intergenic | 40.0% |
| ! | TTCTGGGAAAGTGACAATTG+AGG | + | Chr1:101071861-101071880 | MsG0180006182.01.T01:CDS | 40.0% |
| ! | TTGCCGAATGTGAATTTTGC+AGG | - | Chr1:101071514-101071533 | None:intergenic | 40.0% |
| !! | GAGTGAAAGTGATGGATCAA+TGG | - | Chr1:101071548-101071567 | None:intergenic | 40.0% |
| !!! | ATACTGTTTTTGGTGCGTTG+CGG | + | Chr1:101072304-101072323 | MsG0180006182.01.T01:CDS | 40.0% |
| AAATCTCGGTTGATCTCGGA+TGG | - | Chr1:101073439-101073458 | None:intergenic | 45.0% | |
| AACACAATTGGCTGAACGTC+TGG | - | Chr1:101073368-101073387 | None:intergenic | 45.0% | |
| AACGAGAGTAGACTAGATGG+AGG | + | Chr1:101072733-101072752 | MsG0180006182.01.T01:intron | 45.0% | |
| ACACAATTGGCTGAACGTCT+GGG | - | Chr1:101073367-101073386 | None:intergenic | 45.0% | |
| ACCATGATTCTGCATGACCA+GGG | - | Chr1:101074182-101074201 | None:intergenic | 45.0% | |
| ACCTAGCGTAGAAAAGATGG+TGG | + | Chr1:101072655-101072674 | MsG0180006182.01.T01:intron | 45.0% | |
| ACGAGAGTAGACTAGATGGA+GGG | + | Chr1:101072734-101072753 | MsG0180006182.01.T01:intron | 45.0% | |
| CAACCGAGATTTCCATTTCG+TGG | + | Chr1:101073447-101073466 | MsG0180006182.01.T01:intron | 45.0% | |
| CATCATAAAAAGGGGGATGG+AGG | - | Chr1:101073340-101073359 | None:intergenic | 45.0% | |
| CCCAACATAAGTCCACGAAA+TGG | - | Chr1:101073462-101073481 | None:intergenic | 45.0% | |
| GAGGGTAGTCAAATCACTAG+AGG | + | Chr1:101072752-101072771 | MsG0180006182.01.T01:intron | 45.0% | |
| GATCCATCACTTTCACTCAC+CGG | + | Chr1:101071550-101071569 | MsG0180006182.01.T01:CDS | 45.0% | |
| GCCGTGTTACATCTTTGAGT+TGG | + | Chr1:101073932-101073951 | MsG0180006182.01.T01:intron | 45.0% | |
| GTGGGAACGTTACACAATAG+AGG | + | Chr1:101073881-101073900 | MsG0180006182.01.T01:intron | 45.0% | |
| TACCATGATTCTGCATGACC+AGG | - | Chr1:101074183-101074202 | None:intergenic | 45.0% | |
| TTTATCCCACTAAATGGGGC+CGG | - | Chr1:101072887-101072906 | None:intergenic | 45.0% | |
| ! | TCCACCATCTTTTCTACGCT+AGG | - | Chr1:101072659-101072678 | None:intergenic | 45.0% |
| ! | TTATGGACTTTGAAGGGAGG+AGG | + | Chr1:101072394-101072413 | MsG0180006182.01.T01:intron | 45.0% |
| !! | TGATGAAGAAGCACCATTGC+CGG | - | Chr1:101071572-101071591 | None:intergenic | 45.0% |
| !!! | TACTGTTTTTGGTGCGTTGC+GGG | + | Chr1:101072305-101072324 | MsG0180006182.01.T01:CDS | 45.0% |
| !!! | TTTTTTAATCTTTATTTTTT+TGG | + | Chr1:101072216-101072235 | MsG0180006182.01.T01:intron | 5.0% |
| GAGAGAGAGAGAGAGAGTAG+CGG | + | Chr1:101072628-101072647 | MsG0180006182.01.T01:intron | 50.0% | |
| GGCACCTAGCGTAGAAAAGA+TGG | + | Chr1:101072652-101072671 | MsG0180006182.01.T01:intron | 50.0% | |
| GTTGCAGCTTCAACTTGGAG+TGG | + | Chr1:101071801-101071820 | MsG0180006182.01.T01:intron | 50.0% | |
| TCACTTTCACTCACCGGCAA+TGG | + | Chr1:101071556-101071575 | MsG0180006182.01.T01:CDS | 50.0% | |
| TCCCTGGTCATGCAGAATCA+TGG | + | Chr1:101074178-101074197 | MsG0180006182.01.T01:CDS | 50.0% | |
| TGGTGGAAACTCGGCTTAGT+TGG | + | Chr1:101072672-101072691 | MsG0180006182.01.T01:intron | 50.0% | |
| TTGCCGGTGAGTGAAAGTGA+TGG | - | Chr1:101071556-101071575 | None:intergenic | 50.0% | |
| !! | GTATGGGACAAAGTGTTGGG+CGG | + | Chr1:101072479-101072498 | MsG0180006182.01.T01:intron | 50.0% |
| !! | TATGGGACAAAGTGTTGGGC+GGG | + | Chr1:101072480-101072499 | MsG0180006182.01.T01:intron | 50.0% |
| !!! | ACTGTTTTTGGTGCGTTGCG+GGG | + | Chr1:101072306-101072325 | MsG0180006182.01.T01:CDS | 50.0% |
| AGAGAGAGAGAGAGTAGCGG+TGG | + | Chr1:101072631-101072650 | MsG0180006182.01.T01:intron | 55.0% | |
| ATGGCAGAAGTGGATGTCCC+TGG | + | Chr1:101074162-101074181 | MsG0180006182.01.T01:CDS | 55.0% | |
| ATGTAGCCGGCCCCATTTAG+TGG | + | Chr1:101072878-101072897 | MsG0180006182.01.T01:intron | 55.0% | |
| GCAGGGAGAGGCCAAATGAA+TGG | - | Chr1:101071496-101071515 | None:intergenic | 55.0% | |
| GGTTGATCTCGGATGGACCA+TGG | - | Chr1:101073432-101073451 | None:intergenic | 55.0% | |
| TGTAGCCGGCCCCATTTAGT+GGG | + | Chr1:101072879-101072898 | MsG0180006182.01.T01:intron | 55.0% | |
| ! | GACTTTGAAGGGAGGAGGAG+TGG | + | Chr1:101072399-101072418 | MsG0180006182.01.T01:intron | 55.0% |
| TGGTGCGTTGCGGGGATTAG+AGG | + | Chr1:101072314-101072333 | MsG0180006182.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 101071466 | 101074203 | 101071466 | ID=MsG0180006182.01;Name=MsG0180006182.01 |
| Chr1 | mRNA | 101071466 | 101074203 | 101071466 | ID=MsG0180006182.01.T01;Parent=MsG0180006182.01;Name=MsG0180006182.01.T01;_AED=0.45;_eAED=0.51;_QI=0|0.2|0.33|1|0.4|0.33|6|0|188 |
| Chr1 | exon | 101071466 | 101071684 | 101071466 | ID=MsG0180006182.01.T01:exon:12787;Parent=MsG0180006182.01.T01 |
| Chr1 | exon | 101071808 | 101071882 | 101071808 | ID=MsG0180006182.01.T01:exon:12788;Parent=MsG0180006182.01.T01 |
| Chr1 | exon | 101072300 | 101072335 | 101072300 | ID=MsG0180006182.01.T01:exon:12789;Parent=MsG0180006182.01.T01 |
| Chr1 | exon | 101073792 | 101073880 | 101073792 | ID=MsG0180006182.01.T01:exon:12790;Parent=MsG0180006182.01.T01 |
| Chr1 | exon | 101073970 | 101074038 | 101073970 | ID=MsG0180006182.01.T01:exon:12791;Parent=MsG0180006182.01.T01 |
| Chr1 | exon | 101074125 | 101074203 | 101074125 | ID=MsG0180006182.01.T01:exon:12792;Parent=MsG0180006182.01.T01 |
| Chr1 | CDS | 101071466 | 101071684 | 101071466 | ID=MsG0180006182.01.T01:cds;Parent=MsG0180006182.01.T01 |
| Chr1 | CDS | 101071808 | 101071882 | 101071808 | ID=MsG0180006182.01.T01:cds;Parent=MsG0180006182.01.T01 |
| Chr1 | CDS | 101072300 | 101072335 | 101072300 | ID=MsG0180006182.01.T01:cds;Parent=MsG0180006182.01.T01 |
| Chr1 | CDS | 101073792 | 101073880 | 101073792 | ID=MsG0180006182.01.T01:cds;Parent=MsG0180006182.01.T01 |
| Chr1 | CDS | 101073970 | 101074038 | 101073970 | ID=MsG0180006182.01.T01:cds;Parent=MsG0180006182.01.T01 |
| Chr1 | CDS | 101074125 | 101074203 | 101074125 | ID=MsG0180006182.01.T01:cds;Parent=MsG0180006182.01.T01 |
| Gene Sequence |
| Protein sequence |
