Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043983.01.T01 | XP_003628202.1 | 93.631 | 157 | 10 | 0 | 1 | 157 | 1 | 157 | 1.88E-104 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043983.01.T01 | Q9SSK5 | 36.184 | 152 | 94 | 3 | 3 | 152 | 7 | 157 | 1.08E-25 | 98.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043983.01.T01 | B7FHH7 | 93.631 | 157 | 10 | 0 | 1 | 157 | 1 | 157 | 8.99e-105 | 305 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0880043983.01 | 0.899430 | 1.997427e-77 | 2.469369e-73 |
| MsG0080048652.01 | MsG0880043983.01 | 0.907955 | 2.892882e-81 | 5.252131e-77 |
| MsG0080048694.01 | MsG0880043983.01 | -0.864937 | 8.486005e-65 | 2.711630e-61 |
| MsG0080048695.01 | MsG0880043983.01 | -0.864424 | 1.228450e-64 | 3.855368e-61 |
| MsG0080048948.01 | MsG0880043983.01 | -0.832566 | 8.785865e-56 | 9.857934e-53 |
| MsG0080049076.01 | MsG0880043983.01 | -0.810558 | 1.086039e-50 | 6.567333e-48 |
| MsG0180000076.01 | MsG0880043983.01 | 0.817678 | 2.912029e-52 | 2.134665e-49 |
| MsG0180001108.01 | MsG0880043983.01 | 0.805914 | 1.060570e-49 | 5.680104e-47 |
| MsG0180001925.01 | MsG0880043983.01 | -0.839987 | 1.140035e-57 | 1.601544e-54 |
| MsG0180002099.01 | MsG0880043983.01 | -0.811677 | 6.210670e-51 | 3.868502e-48 |
| MsG0180002439.01 | MsG0880043983.01 | -0.827983 | 1.157555e-54 | 1.135470e-51 |
| MsG0880043948.01 | MsG0880043983.01 | 0.893417 | 6.410052e-75 | 6.099334e-71 |
| MsG0880043951.01 | MsG0880043983.01 | 0.803358 | 3.621256e-49 | 1.815942e-46 |
| MsG0880043959.01 | MsG0880043983.01 | 0.806664 | 7.370148e-50 | 4.023265e-47 |
| MsG0880043961.01 | MsG0880043983.01 | 0.887060 | 1.987666e-72 | 1.455859e-68 |
| MsG0880043983.01 | MsG0880043989.01 | 0.898690 | 4.142475e-77 | 4.951156e-73 |
| MsG0880043983.01 | MsG0880044688.01 | 0.820316 | 7.316662e-53 | 5.769644e-50 |
| MsG0880043983.01 | MsG0880045054.01 | 0.817994 | 2.470545e-52 | 1.826823e-49 |
| MsG0880043983.01 | MsG0880045385.01 | -0.801918 | 7.177852e-49 | 3.469783e-46 |
| MsG0880043983.01 | MsG0880045804.01 | 0.805112 | 1.561934e-49 | 8.194605e-47 |
| MsG0880043983.01 | MsG0880045960.01 | 0.800737 | 1.252644e-48 | 5.877009e-46 |
| MsG0880043983.01 | MsG0880046137.01 | 0.801737 | 7.817634e-49 | 3.761588e-46 |
| MsG0880043983.01 | MsG0880046174.01 | -0.818255 | 2.156176e-52 | 1.605762e-49 |
| MsG0880043983.01 | MsG0880046693.01 | 0.823838 | 1.116731e-53 | 9.725132e-51 |
| MsG0880043983.01 | MsG0880047714.01 | 0.804200 | 2.421501e-49 | 1.240893e-46 |
| MsG0180002808.01 | MsG0880043983.01 | 0.821547 | 3.809977e-53 | 3.109150e-50 |
| MsG0180003483.01 | MsG0880043983.01 | 0.800413 | 1.458460e-48 | 6.786839e-46 |
| MsG0180003859.01 | MsG0880043983.01 | 0.810811 | 9.572059e-51 | 5.827689e-48 |
| MsG0180004124.01 | MsG0880043983.01 | -0.852594 | 4.166906e-61 | 8.750054e-58 |
| MsG0180004125.01 | MsG0880043983.01 | -0.848979 | 4.338169e-60 | 8.102929e-57 |
| MsG0180004510.01 | MsG0880043983.01 | 0.821867 | 3.213670e-53 | 2.646439e-50 |
| MsG0180004559.01 | MsG0880043983.01 | 0.869543 | 2.861596e-66 | 1.078084e-62 |
| MsG0180004586.01 | MsG0880043983.01 | -0.816018 | 6.863099e-52 | 4.807695e-49 |
| MsG0180005002.01 | MsG0880043983.01 | 0.803844 | 2.870827e-49 | 1.457869e-46 |
| MsG0180005272.01 | MsG0880043983.01 | 0.817506 | 3.183489e-52 | 2.322751e-49 |
| MsG0180005369.01 | MsG0880043983.01 | -0.832520 | 9.020084e-56 | 1.010637e-52 |
| MsG0180005757.01 | MsG0880043983.01 | 0.800021 | 1.751862e-48 | 8.071228e-46 |
| MsG0180006026.01 | MsG0880043983.01 | 0.805431 | 1.339505e-49 | 7.085386e-47 |
| MsG0180006182.01 | MsG0880043983.01 | 0.810811 | 9.575135e-51 | 5.829476e-48 |
| MsG0180006191.01 | MsG0880043983.01 | 0.809806 | 1.576883e-50 | 9.349438e-48 |
| MsG0280006403.01 | MsG0880043983.01 | 0.812566 | 3.975608e-51 | 2.536296e-48 |
| MsG0280006420.01 | MsG0880043983.01 | 0.807885 | 4.062818e-50 | 2.289323e-47 |
| MsG0780040482.01 | MsG0880043983.01 | 0.804616 | 1.982808e-49 | 1.027031e-46 |
| MsG0780040878.01 | MsG0880043983.01 | 0.850375 | 1.768248e-60 | 3.456555e-57 |
| MsG0780041079.01 | MsG0880043983.01 | 0.804890 | 1.738784e-49 | 9.071345e-47 |
| MsG0780041100.01 | MsG0880043983.01 | 0.818356 | 2.045462e-52 | 1.527759e-49 |
| MsG0780041118.01 | MsG0880043983.01 | 0.825719 | 4.020724e-54 | 3.694387e-51 |
| MsG0780041180.01 | MsG0880043983.01 | 0.813728 | 2.209492e-51 | 1.454332e-48 |
| MsG0780041363.01 | MsG0880043983.01 | 0.844119 | 9.207644e-59 | 1.471797e-55 |
| MsG0780041531.01 | MsG0880043983.01 | -0.802476 | 5.509528e-49 | 2.701433e-46 |
| MsG0880042122.01 | MsG0880043983.01 | 0.826924 | 2.076963e-54 | 1.975348e-51 |
| MsG0880042291.01 | MsG0880043983.01 | -0.814501 | 1.491958e-51 | 1.002861e-48 |
| MsG0880042541.01 | MsG0880043983.01 | 0.819738 | 9.921796e-53 | 7.699332e-50 |
| MsG0880042644.01 | MsG0880043983.01 | 0.810112 | 1.355067e-50 | 8.098969e-48 |
| MsG0880042778.01 | MsG0880043983.01 | 0.815570 | 8.640875e-52 | 5.979106e-49 |
| MsG0880042846.01 | MsG0880043983.01 | 0.801293 | 9.642647e-49 | 4.588197e-46 |
| MsG0880043261.01 | MsG0880043983.01 | 0.868840 | 4.840462e-66 | 1.776873e-62 |
| MsG0880043297.01 | MsG0880043983.01 | 0.806376 | 8.476088e-50 | 4.593316e-47 |
| MsG0880043551.01 | MsG0880043983.01 | 0.876055 | 1.891670e-68 | 9.040105e-65 |
| MsG0280010944.01 | MsG0880043983.01 | 0.801115 | 1.048528e-48 | 4.966877e-46 |
| MsG0280010950.01 | MsG0880043983.01 | 0.816893 | 4.371668e-52 | 3.136538e-49 |
| MsG0280011399.01 | MsG0880043983.01 | 0.822540 | 2.243370e-53 | 1.883263e-50 |
| MsG0380013041.01 | MsG0880043983.01 | 0.804892 | 1.736883e-49 | 9.061984e-47 |
| MsG0380013415.01 | MsG0880043983.01 | 0.819562 | 1.088042e-52 | 8.401941e-50 |
| MsG0380013890.01 | MsG0880043983.01 | -0.801175 | 1.019026e-48 | 4.834426e-46 |
| MsG0380013892.01 | MsG0880043983.01 | -0.871545 | 6.299339e-67 | 2.550923e-63 |
| MsG0380013928.01 | MsG0880043983.01 | -0.846690 | 1.853352e-59 | 3.216390e-56 |
| MsG0380013943.01 | MsG0880043983.01 | -0.809493 | 1.841082e-50 | 1.082535e-47 |
| MsG0380013945.01 | MsG0880043983.01 | -0.802802 | 4.718890e-49 | 2.333178e-46 |
| MsG0380013953.01 | MsG0880043983.01 | -0.807323 | 5.345415e-50 | 2.968534e-47 |
| MsG0380013971.01 | MsG0880043983.01 | -0.803286 | 3.748475e-49 | 1.876289e-46 |
| MsG0380013985.01 | MsG0880043983.01 | -0.804446 | 2.151806e-49 | 1.109690e-46 |
| MsG0380013986.01 | MsG0880043983.01 | -0.871585 | 6.111164e-67 | 2.478604e-63 |
| MsG0380013997.01 | MsG0880043983.01 | -0.865735 | 4.761002e-65 | 1.565608e-61 |
| MsG0380014006.01 | MsG0880043983.01 | -0.805297 | 1.428840e-49 | 7.531993e-47 |
| MsG0380014016.01 | MsG0880043983.01 | -0.866689 | 2.373649e-65 | 8.072274e-62 |
| MsG0380014029.01 | MsG0880043983.01 | -0.855307 | 6.886779e-62 | 1.583200e-58 |
| MsG0380014129.01 | MsG0880043983.01 | -0.808657 | 2.780763e-50 | 1.599029e-47 |
| MsG0380014410.01 | MsG0880043983.01 | 0.818768 | 1.649477e-52 | 1.246032e-49 |
| MsG0380014735.01 | MsG0880043983.01 | -0.803862 | 2.847056e-49 | 1.446424e-46 |
| MsG0380014754.01 | MsG0880043983.01 | 0.824789 | 6.672794e-54 | 5.971080e-51 |
| MsG0680030961.01 | MsG0880043983.01 | 0.829614 | 4.665229e-55 | 4.799403e-52 |
| MsG0680031178.01 | MsG0880043983.01 | 0.844439 | 7.557201e-59 | 1.220011e-55 |
| MsG0680031841.01 | MsG0880043983.01 | 0.837326 | 5.552672e-57 | 7.187769e-54 |
| MsG0480018788.01 | MsG0880043983.01 | -0.803741 | 3.016398e-49 | 1.527669e-46 |
| MsG0480019028.01 | MsG0880043983.01 | -0.874968 | 4.458316e-68 | 2.046914e-64 |
| MsG0480019588.01 | MsG0880043983.01 | 0.823086 | 1.673392e-53 | 1.426698e-50 |
| MsG0480019635.01 | MsG0880043983.01 | 0.824541 | 7.634896e-54 | 6.782928e-51 |
| MsG0480019666.01 | MsG0880043983.01 | 0.804493 | 2.103452e-49 | 1.086066e-46 |
| MsG0480020051.01 | MsG0880043983.01 | -0.814989 | 1.163176e-51 | 7.921776e-49 |
| MsG0480020052.01 | MsG0880043983.01 | -0.832013 | 1.204548e-55 | 1.329620e-52 |
| MsG0480020263.01 | MsG0880043983.01 | 0.811057 | 8.470606e-51 | 5.191064e-48 |
| MsG0480020722.01 | MsG0880043983.01 | 0.808831 | 2.552695e-50 | 1.474614e-47 |
| MsG0480021931.01 | MsG0880043983.01 | 0.801342 | 9.419918e-49 | 4.487799e-46 |
| MsG0480021972.01 | MsG0880043983.01 | 0.812159 | 4.878310e-51 | 3.078517e-48 |
| MsG0480022167.01 | MsG0880043983.01 | 0.829508 | 4.950730e-55 | 5.077134e-52 |
| MsG0480023195.01 | MsG0880043983.01 | 0.915226 | 7.573781e-85 | 1.959009e-80 |
| MsG0480023322.01 | MsG0880043983.01 | 0.849387 | 3.340824e-60 | 6.322931e-57 |
| MsG0480023324.01 | MsG0880043983.01 | 0.872509 | 3.010239e-67 | 1.263166e-63 |
| MsG0480023532.01 | MsG0880043983.01 | 0.808072 | 3.705593e-50 | 2.098440e-47 |
| MsG0480023541.01 | MsG0880043983.01 | 0.807818 | 4.198124e-50 | 2.361481e-47 |
| MsG0580024119.01 | MsG0880043983.01 | 0.804505 | 2.091374e-49 | 1.080140e-46 |
| MsG0580024442.01 | MsG0880043983.01 | -0.808359 | 3.218858e-50 | 1.836773e-47 |
| MsG0580024478.01 | MsG0880043983.01 | 0.811490 | 6.821726e-51 | 4.228602e-48 |
| MsG0580024707.01 | MsG0880043983.01 | 0.806227 | 9.112986e-50 | 4.919961e-47 |
| MsG0580025023.01 | MsG0880043983.01 | 0.804362 | 2.240428e-49 | 1.152927e-46 |
| MsG0580025105.01 | MsG0880043983.01 | -0.800689 | 1.280810e-48 | 6.001834e-46 |
| MsG0580025117.01 | MsG0880043983.01 | 0.821327 | 4.282484e-53 | 3.473377e-50 |
| MsG0580025385.01 | MsG0880043983.01 | 0.822095 | 2.845940e-53 | 2.358705e-50 |
| MsG0580025443.01 | MsG0880043983.01 | 0.823800 | 1.139699e-53 | 9.914812e-51 |
| MsG0580025444.01 | MsG0880043983.01 | 0.825480 | 4.582605e-54 | 4.181725e-51 |
| MsG0580025486.01 | MsG0880043983.01 | -0.815021 | 1.144568e-51 | 7.801700e-49 |
| MsG0580025620.01 | MsG0880043983.01 | 0.827637 | 1.401370e-54 | 1.360634e-51 |
| MsG0580025822.01 | MsG0880043983.01 | 0.872523 | 2.979053e-67 | 1.250721e-63 |
| MsG0380015691.01 | MsG0880043983.01 | 0.808677 | 2.754168e-50 | 1.584552e-47 |
| MsG0380016008.01 | MsG0880043983.01 | 0.804373 | 2.228764e-49 | 1.147250e-46 |
| MsG0380016112.01 | MsG0880043983.01 | 0.801094 | 1.058752e-48 | 5.012949e-46 |
| MsG0380016476.01 | MsG0880043983.01 | 0.803988 | 2.679541e-49 | 1.365788e-46 |
| MsG0380016524.01 | MsG0880043983.01 | 0.838735 | 2.409700e-57 | 3.256924e-54 |
| MsG0380016935.01 | MsG0880043983.01 | -0.818422 | 1.976055e-52 | 1.478628e-49 |
| MsG0380017102.01 | MsG0880043983.01 | 0.805106 | 1.566868e-49 | 8.219137e-47 |
| MsG0380017231.01 | MsG0880043983.01 | 0.896974 | 2.201709e-76 | 2.436764e-72 |
| MsG0380017405.01 | MsG0880043983.01 | -0.800463 | 1.424583e-48 | 6.637162e-46 |
| MsG0380017730.01 | MsG0880043983.01 | 0.822698 | 2.060948e-53 | 1.737869e-50 |
| MsG0380017992.01 | MsG0880043983.01 | 0.820700 | 5.971778e-53 | 4.759474e-50 |
| MsG0380017997.01 | MsG0880043983.01 | 0.801411 | 9.119762e-49 | 4.352242e-46 |
| MsG0380018007.01 | MsG0880043983.01 | 0.830719 | 2.506453e-55 | 2.662780e-52 |
| MsG0580026162.01 | MsG0880043983.01 | 0.810397 | 1.176674e-50 | 7.084719e-48 |
| MsG0580027641.01 | MsG0880043983.01 | 0.863697 | 2.068483e-64 | 6.328359e-61 |
| MsG0580028023.01 | MsG0880043983.01 | 0.819132 | 1.363534e-52 | 1.040373e-49 |
| MsG0580028330.01 | MsG0880043983.01 | 0.824183 | 9.264850e-54 | 8.147007e-51 |
| MsG0580028565.01 | MsG0880043983.01 | 0.839003 | 2.054787e-57 | 2.799967e-54 |
| MsG0580029023.01 | MsG0880043983.01 | 0.800101 | 1.687396e-48 | 7.790075e-46 |
| MsG0580029623.01 | MsG0880043983.01 | 0.829154 | 6.032464e-55 | 6.122847e-52 |
| MsG0580029792.01 | MsG0880043983.01 | -0.808696 | 2.727508e-50 | 1.570003e-47 |
| MsG0580030179.01 | MsG0880043983.01 | 0.843219 | 1.603325e-58 | 2.491079e-55 |
| MsG0680030315.01 | MsG0880043983.01 | 0.812879 | 3.394958e-51 | 2.183757e-48 |
| MsG0680030545.01 | MsG0880043983.01 | 0.832375 | 9.797867e-56 | 1.093073e-52 |
| MsG0280006884.01 | MsG0880043983.01 | 0.831704 | 1.435481e-55 | 1.570258e-52 |
| MsG0280007427.01 | MsG0880043983.01 | 0.804945 | 1.693362e-49 | 8.846534e-47 |
| MsG0280007653.01 | MsG0880043983.01 | -0.814244 | 1.700413e-51 | 1.135000e-48 |
| MsG0280007786.01 | MsG0880043983.01 | 0.842243 | 2.913367e-58 | 4.390017e-55 |
| MsG0280007844.01 | MsG0880043983.01 | 0.840083 | 1.076322e-57 | 1.516608e-54 |
| MsG0280008407.01 | MsG0880043983.01 | 0.867964 | 9.277557e-66 | 3.299299e-62 |
| MsG0280008495.01 | MsG0880043983.01 | 0.833539 | 5.033449e-56 | 5.814258e-53 |
| MsG0280008553.01 | MsG0880043983.01 | 0.849527 | 3.053403e-60 | 5.804660e-57 |
| MsG0280008820.01 | MsG0880043983.01 | -0.812771 | 3.584379e-51 | 2.298988e-48 |
| MsG0280009241.01 | MsG0880043983.01 | 0.865553 | 5.433815e-65 | 1.775229e-61 |
| MsG0280009742.01 | MsG0880043983.01 | -0.809272 | 2.054320e-50 | 1.200824e-47 |
| MsG0280009864.01 | MsG0880043983.01 | -0.804010 | 2.652262e-49 | 1.352582e-46 |
| MsG0280010142.01 | MsG0880043983.01 | -0.854001 | 1.645365e-61 | 3.622423e-58 |
| MsG0280010240.01 | MsG0880043983.01 | 0.805909 | 1.062871e-49 | 5.691765e-47 |
| MsG0280010296.01 | MsG0880043983.01 | 0.802190 | 6.310026e-49 | 3.071402e-46 |
| MsG0280010303.01 | MsG0880043983.01 | 0.855334 | 6.762605e-62 | 1.556079e-58 |
| MsG0680035870.01 | MsG0880043983.01 | -0.808404 | 3.148972e-50 | 1.798971e-47 |
| MsG0780037232.01 | MsG0880043983.01 | 0.813038 | 3.133611e-51 | 2.024229e-48 |
| MsG0780038393.01 | MsG0880043983.01 | 0.813361 | 2.661352e-51 | 1.734410e-48 |
| MsG0780038810.01 | MsG0880043983.01 | 0.876972 | 9.122220e-69 | 4.510044e-65 |
| MsG0780038823.01 | MsG0880043983.01 | 0.806862 | 6.694158e-50 | 3.673240e-47 |
| MsG0780039916.01 | MsG0880043983.01 | 0.850866 | 1.287403e-60 | 2.557357e-57 |
| MsG0780039917.01 | MsG0880043983.01 | 0.804010 | 2.652075e-49 | 1.352490e-46 |
| MsG0780039918.01 | MsG0880043983.01 | 0.811775 | 5.914023e-51 | 3.693521e-48 |
| MsG0780040021.01 | MsG0880043983.01 | 0.825518 | 4.488174e-54 | 4.100134e-51 |
| MsG0780040118.01 | MsG0880043983.01 | 0.823796 | 1.141971e-53 | 9.933684e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043983.01.T01 | MTR_8g045520 | 93.631 | 157 | 10 | 0 | 1 | 157 | 1 | 157 | 2.28e-108 | 305 |
| MsG0880043983.01.T01 | MTR_8g045490 | 80.255 | 157 | 30 | 1 | 1 | 157 | 1 | 156 | 3.73e-91 | 262 |
| MsG0880043983.01.T01 | MTR_8g045695 | 79.618 | 157 | 31 | 1 | 1 | 157 | 1 | 156 | 9.37e-90 | 258 |
| MsG0880043983.01.T01 | MTR_8g045400 | 78.981 | 157 | 32 | 1 | 1 | 157 | 1 | 156 | 1.18e-89 | 258 |
| MsG0880043983.01.T01 | MTR_8g045555 | 76.159 | 151 | 36 | 0 | 1 | 151 | 1 | 151 | 2.68e-86 | 249 |
| MsG0880043983.01.T01 | MTR_8g045300 | 75.000 | 156 | 39 | 0 | 1 | 156 | 1 | 156 | 9.91e-86 | 248 |
| MsG0880043983.01.T01 | MTR_8g045665 | 76.433 | 157 | 36 | 1 | 1 | 157 | 1 | 156 | 4.55e-85 | 246 |
| MsG0880043983.01.T01 | MTR_8g045570 | 75.497 | 151 | 37 | 0 | 1 | 151 | 1 | 151 | 1.05e-84 | 245 |
| MsG0880043983.01.T01 | MTR_8g045735 | 74.839 | 155 | 38 | 1 | 1 | 155 | 1 | 154 | 6.83e-84 | 243 |
| MsG0880043983.01.T01 | MTR_8g045640 | 75.159 | 157 | 38 | 1 | 1 | 157 | 1 | 156 | 7.21e-84 | 243 |
| MsG0880043983.01.T01 | MTR_8g045560 | 72.611 | 157 | 42 | 1 | 1 | 157 | 1 | 156 | 1.37e-80 | 235 |
| MsG0880043983.01.T01 | MTR_1g030810 | 42.208 | 154 | 86 | 2 | 1 | 152 | 1 | 153 | 4.25e-39 | 130 |
| MsG0880043983.01.T01 | MTR_1g030820 | 38.312 | 154 | 92 | 2 | 1 | 152 | 1 | 153 | 1.15e-37 | 126 |
| MsG0880043983.01.T01 | MTR_1g030840 | 36.538 | 156 | 91 | 4 | 1 | 149 | 1 | 155 | 4.85e-28 | 102 |
| MsG0880043983.01.T01 | MTR_8g012550 | 32.667 | 150 | 98 | 3 | 6 | 154 | 8 | 155 | 1.68e-26 | 98.2 |
| MsG0880043983.01.T01 | MTR_1g031640 | 35.374 | 147 | 86 | 5 | 7 | 151 | 7 | 146 | 3.19e-24 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043983.01.T01 | AT5G28010 | 34.211 | 152 | 97 | 3 | 3 | 152 | 15 | 165 | 4.77e-27 | 99.8 |
| MsG0880043983.01.T01 | AT5G28010 | 34.211 | 152 | 97 | 3 | 3 | 152 | 15 | 165 | 4.77e-27 | 99.8 |
| MsG0880043983.01.T01 | AT1G70890 | 36.184 | 152 | 94 | 3 | 3 | 152 | 7 | 157 | 1.10e-26 | 98.6 |
| MsG0880043983.01.T01 | AT1G23120 | 33.333 | 144 | 91 | 3 | 10 | 153 | 10 | 148 | 9.40e-25 | 93.6 |
| MsG0880043983.01.T01 | AT1G70840 | 32.895 | 152 | 99 | 3 | 3 | 152 | 20 | 170 | 2.07e-24 | 93.2 |
| MsG0880043983.01.T01 | AT1G23120 | 33.333 | 144 | 91 | 3 | 10 | 153 | 60 | 198 | 4.02e-24 | 93.2 |
| MsG0880043983.01.T01 | AT1G70830 | 33.553 | 152 | 98 | 3 | 3 | 152 | 22 | 172 | 7.81e-24 | 91.7 |
| MsG0880043983.01.T01 | AT1G70830 | 33.553 | 152 | 98 | 3 | 3 | 152 | 22 | 172 | 1.55e-23 | 91.7 |
| MsG0880043983.01.T01 | AT1G70870 | 37.748 | 151 | 81 | 4 | 1 | 151 | 1 | 138 | 2.02e-23 | 89.7 |
| MsG0880043983.01.T01 | AT5G28000 | 31.579 | 152 | 101 | 3 | 3 | 152 | 13 | 163 | 4.48e-23 | 89.7 |
| MsG0880043983.01.T01 | AT1G70830 | 33.553 | 152 | 98 | 3 | 3 | 152 | 22 | 172 | 5.74e-23 | 91.3 |
| MsG0880043983.01.T01 | AT1G70830 | 33.553 | 152 | 98 | 3 | 3 | 152 | 137 | 287 | 1.28e-22 | 91.3 |
| MsG0880043983.01.T01 | AT1G70830 | 28.421 | 95 | 67 | 1 | 59 | 152 | 31 | 125 | 3.39e-11 | 60.1 |
| MsG0880043983.01.T01 | AT1G70830 | 33.553 | 152 | 98 | 3 | 3 | 152 | 22 | 172 | 1.59e-22 | 91.7 |
| MsG0880043983.01.T01 | AT1G70830 | 33.553 | 152 | 98 | 3 | 3 | 152 | 184 | 334 | 3.90e-22 | 90.9 |
| MsG0880043983.01.T01 | AT1G70850 | 33.113 | 151 | 98 | 3 | 3 | 151 | 9 | 158 | 1.91e-22 | 89.7 |
| MsG0880043983.01.T01 | AT1G70850 | 33.113 | 151 | 98 | 3 | 3 | 151 | 9 | 158 | 5.35e-22 | 90.1 |
| MsG0880043983.01.T01 | AT1G70850 | 33.803 | 142 | 91 | 3 | 13 | 152 | 175 | 315 | 6.92e-22 | 89.7 |
| MsG0880043983.01.T01 | AT1G70850 | 33.113 | 151 | 98 | 3 | 3 | 151 | 9 | 158 | 5.35e-22 | 90.1 |
| MsG0880043983.01.T01 | AT1G70850 | 33.803 | 142 | 91 | 3 | 13 | 152 | 175 | 315 | 6.92e-22 | 89.7 |
| MsG0880043983.01.T01 | AT1G24020 | 33.117 | 154 | 99 | 3 | 1 | 152 | 1 | 152 | 1.86e-19 | 80.1 |
| MsG0880043983.01.T01 | AT1G24020 | 33.117 | 154 | 99 | 3 | 1 | 152 | 1 | 152 | 1.86e-19 | 80.1 |
| MsG0880043983.01.T01 | AT1G23130 | 27.152 | 151 | 108 | 2 | 3 | 152 | 10 | 159 | 6.14e-19 | 79.0 |
| MsG0880043983.01.T01 | AT1G70880 | 28.289 | 152 | 106 | 3 | 3 | 152 | 8 | 158 | 1.00e-18 | 78.2 |
| MsG0880043983.01.T01 | AT4G23670 | 34.194 | 155 | 93 | 4 | 1 | 151 | 1 | 150 | 1.15e-18 | 77.8 |
| MsG0880043983.01.T01 | AT1G14930 | 30.263 | 152 | 103 | 3 | 1 | 151 | 1 | 150 | 1.47e-17 | 75.1 |
| MsG0880043983.01.T01 | AT1G35260 | 28.082 | 146 | 101 | 3 | 9 | 152 | 8 | 151 | 4.00e-16 | 71.2 |
| MsG0880043983.01.T01 | AT2G01520 | 28.947 | 152 | 105 | 3 | 1 | 151 | 1 | 150 | 6.05e-16 | 70.9 |
| MsG0880043983.01.T01 | AT4G23680 | 29.677 | 155 | 100 | 4 | 1 | 151 | 1 | 150 | 1.99e-15 | 69.3 |
| MsG0880043983.01.T01 | AT1G35310 | 26.056 | 142 | 102 | 3 | 13 | 153 | 12 | 151 | 2.23e-14 | 66.6 |
| MsG0880043983.01.T01 | AT4G14060 | 29.677 | 155 | 100 | 4 | 1 | 151 | 1 | 150 | 2.45e-14 | 66.6 |
| MsG0880043983.01.T01 | AT1G14940 | 28.477 | 151 | 105 | 3 | 1 | 150 | 1 | 149 | 2.08e-13 | 64.3 |
| MsG0880043983.01.T01 | AT2G01530 | 27.632 | 152 | 107 | 3 | 1 | 151 | 1 | 150 | 2.99e-13 | 63.9 |
| MsG0880043983.01.T01 | AT1G30990 | 29.801 | 151 | 102 | 4 | 1 | 150 | 1 | 148 | 4.90e-13 | 63.2 |
| MsG0880043983.01.T01 | AT1G14950 | 28.125 | 160 | 106 | 4 | 1 | 156 | 1 | 155 | 4.94e-13 | 63.2 |
| MsG0880043983.01.T01 | AT3G26460 | 30.380 | 158 | 96 | 6 | 1 | 151 | 1 | 151 | 4.79e-11 | 58.2 |
Find 35 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGGTACTTACAAGCTCTT+TGG | 0.306715 | 8:-33754707 | MsG0880043983.01.T01:CDS |
| ATGGCACTGCTGCTGCTAAA+TGG | 0.310932 | 8:-33754622 | MsG0880043983.01.T01:CDS |
| AAGGTACTTACAAGCTCTTT+GGG | 0.349654 | 8:-33754706 | MsG0880043983.01.T01:CDS |
| CACCCTTATCAATTACTTCA+AGG | 0.382574 | 8:+33754645 | None:intergenic |
| AGATATTGATGAGCACTATA+AGG | 0.414096 | 8:-33754681 | MsG0880043983.01.T01:CDS |
| GGTAAACTTATTACTGAACT+TGG | 0.415223 | 8:-33755471 | MsG0880043983.01.T01:CDS |
| CATCCTTGAAGTAATTGATA+AGG | 0.438738 | 8:-33754648 | MsG0880043983.01.T01:CDS |
| ATCTTCACCCTCATGCAGCT+TGG | 0.445602 | 8:+33755362 | None:intergenic |
| AAGTAGTCCATCCAGCCATT+TGG | 0.456227 | 8:+33754560 | None:intergenic |
| AAACACTGGACTTATGTCAT+AGG | 0.470664 | 8:-33755318 | MsG0880043983.01.T01:intron |
| ATCCTTGAAGTAATTGATAA+GGG | 0.486541 | 8:-33754647 | MsG0880043983.01.T01:CDS |
| TGAAATAACAACAGATGGTA+AGG | 0.489687 | 8:-33754777 | MsG0880043983.01.T01:intron |
| AGCTGCATGAGGGTGAAGAT+TGG | 0.493681 | 8:-33755359 | MsG0880043983.01.T01:CDS |
| TATGACTTATAGAGCAACCT+TGG | 0.515175 | 8:+33754493 | None:intergenic |
| TGATGCTCATCTTGTCAAGC+AGG | 0.523708 | 8:-33754516 | MsG0880043983.01.T01:CDS |
| ATATTGACCCTCCAAATGGC+TGG | 0.527845 | 8:-33754571 | MsG0880043983.01.T01:CDS |
| GAGGATATTGACCCTCCAAA+TGG | 0.539495 | 8:-33754575 | MsG0880043983.01.T01:CDS |
| GTAAACTTATTACTGAACTT+GGG | 0.542207 | 8:-33755470 | MsG0880043983.01.T01:CDS |
| AGATTGGCATCACACTGATT+CGG | 0.545548 | 8:-33755343 | MsG0880043983.01.T01:CDS |
| ATTGATGAACAAAACAAGAA+AGG | 0.549109 | 8:-33754725 | MsG0880043983.01.T01:CDS |
| GAAGTAATTGATAAGGGTGA+TGG | 0.549119 | 8:-33754641 | MsG0880043983.01.T01:CDS |
| TAGTCCATCCAGCCATTTGG+AGG | 0.551025 | 8:+33754563 | None:intergenic |
| ACACTGATTCGGTCAAACAC+TGG | 0.556043 | 8:-33755332 | MsG0880043983.01.T01:CDS |
| TGACCCTCCAAATGGCTGGA+TGG | 0.557517 | 8:-33754567 | MsG0880043983.01.T01:CDS |
| GGATCAAAACACCCGCTGAA+AGG | 0.578575 | 8:-33755449 | MsG0880043983.01.T01:CDS |
| TCATCTTGTCAAGCAGGCCA+AGG | 0.591246 | 8:-33754510 | MsG0880043983.01.T01:CDS |
| TCATGAAACCAAGCTGCATG+AGG | 0.602712 | 8:-33755370 | MsG0880043983.01.T01:CDS |
| AGGTACTTACAAGCTCTTTG+GGG | 0.621914 | 8:-33754705 | MsG0880043983.01.T01:CDS |
| CATGAAACCAAGCTGCATGA+GGG | 0.630684 | 8:-33755369 | MsG0880043983.01.T01:CDS |
| AGTTTGAAGAACCTTTCAGC+GGG | 0.631322 | 8:+33755438 | None:intergenic |
| GGTACTTACAAGCTCTTTGG+GGG | 0.640678 | 8:-33754704 | MsG0880043983.01.T01:CDS |
| GGTACACACATGTCATGAGA+AGG | 0.648648 | 8:-33754756 | MsG0880043983.01.T01:CDS |
| AGTCCATCCAGCCATTTGGA+GGG | 0.649199 | 8:+33754564 | None:intergenic |
| TAGTTTGAAGAACCTTTCAG+CGG | 0.662028 | 8:+33755437 | None:intergenic |
| TGAATATGAGAAGATCAATG+AGG | 0.699788 | 8:-33754594 | MsG0880043983.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATATTTGTCTAATA+TGG | - | Chr8:33755019-33755038 | MsG0880043983.01.T01:intron | 10.0% |
| !! | AATCTTACTAAAAAATGTTA+AGG | + | Chr8:33755142-33755161 | None:intergenic | 15.0% |
| !! | TAGACAAATATTATTATTGA+TGG | + | Chr8:33755016-33755035 | None:intergenic | 15.0% |
| !!! | TATTTTATTGAAAATAGCAA+CGG | + | Chr8:33754835-33754854 | None:intergenic | 15.0% |
| !! | AATTAAAGAGATGTACAAAA+AGG | - | Chr8:33755111-33755130 | MsG0880043983.01.T01:intron | 20.0% |
| !! | ACAAATATTATTATTGATGG+TGG | + | Chr8:33755013-33755032 | None:intergenic | 20.0% |
| !!! | GATCTCTAAAAAATGTTTAA+GGG | - | Chr8:33755041-33755060 | MsG0880043983.01.T01:intron | 20.0% |
| !!! | TAAACTGCTGTTATTTTTTT+TGG | - | Chr8:33755169-33755188 | MsG0880043983.01.T01:intron | 20.0% |
| ! | AGCAAAAAATTGTACAATAC+TGG | + | Chr8:33754977-33754996 | None:intergenic | 25.0% |
| ! | ATCCTTGAAGTAATTGATAA+GGG | - | Chr8:33755335-33755354 | MsG0880043983.01.T01:CDS | 25.0% |
| ! | ATTGATGAACAAAACAAGAA+AGG | - | Chr8:33755257-33755276 | MsG0880043983.01.T01:intron | 25.0% |
| ! | GATCCTTATTAAAAATGGAA+AGG | + | Chr8:33754955-33754974 | None:intergenic | 25.0% |
| ! | GTAAACTTATTACTGAACTT+GGG | - | Chr8:33754512-33754531 | MsG0880043983.01.T01:CDS | 25.0% |
| ! | TACTGGATCCTTATTAAAAA+TGG | + | Chr8:33754960-33754979 | None:intergenic | 25.0% |
| ! | TGTTGTACTACAAATGATAA+CGG | + | Chr8:33755071-33755090 | None:intergenic | 25.0% |
| !! | GGATCTCTAAAAAATGTTTA+AGG | - | Chr8:33755040-33755059 | MsG0880043983.01.T01:intron | 25.0% |
| !!! | GATCCTTTCCATTTTTAATA+AGG | - | Chr8:33754949-33754968 | MsG0880043983.01.T01:intron | 25.0% |
| AGATATTGATGAGCACTATA+AGG | - | Chr8:33755301-33755320 | MsG0880043983.01.T01:intron | 30.0% | |
| CATCCTTGAAGTAATTGATA+AGG | - | Chr8:33755334-33755353 | MsG0880043983.01.T01:CDS | 30.0% | |
| GGTAAACTTATTACTGAACT+TGG | - | Chr8:33754511-33754530 | MsG0880043983.01.T01:CDS | 30.0% | |
| TGAAATAACAACAGATGGTA+AGG | - | Chr8:33755205-33755224 | MsG0880043983.01.T01:intron | 30.0% | |
| TGAATATGAGAAGATCAATG+AGG | - | Chr8:33755388-33755407 | MsG0880043983.01.T01:CDS | 30.0% | |
| !! | ACCATCTGTTGTTATTTCAT+GGG | + | Chr8:33755204-33755223 | None:intergenic | 30.0% |
| !! | TACCATCTGTTGTTATTTCA+TGG | + | Chr8:33755205-33755224 | None:intergenic | 30.0% |
| AAACACTGGACTTATGTCAT+AGG | - | Chr8:33754664-33754683 | MsG0880043983.01.T01:CDS | 35.0% | |
| CAAAATCATCTTGTTGGACT+TGG | - | Chr8:33754719-33754738 | MsG0880043983.01.T01:CDS | 35.0% | |
| CACCCTTATCAATTACTTCA+AGG | + | Chr8:33755340-33755359 | None:intergenic | 35.0% | |
| GAAGTAATTGATAAGGGTGA+TGG | - | Chr8:33755341-33755360 | MsG0880043983.01.T01:CDS | 35.0% | |
| TAGTTTGAAGAACCTTTCAG+CGG | + | Chr8:33754548-33754567 | None:intergenic | 35.0% | |
| TGCCAACAAAATCATCTTGT+TGG | - | Chr8:33754713-33754732 | MsG0880043983.01.T01:CDS | 35.0% | |
| ! | AAGGTACTTACAAGCTCTTT+GGG | - | Chr8:33755276-33755295 | MsG0880043983.01.T01:intron | 35.0% |
| ! | GTCCAACAAGATGATTTTGT+TGG | + | Chr8:33754718-33754737 | None:intergenic | 35.0% |
| !! | AAAGGTACTTACAAGCTCTT+TGG | - | Chr8:33755275-33755294 | MsG0880043983.01.T01:intron | 35.0% |
| AGGTACTTACAAGCTCTTTG+GGG | - | Chr8:33755277-33755296 | MsG0880043983.01.T01:intron | 40.0% | |
| AGTTTGAAGAACCTTTCAGC+GGG | + | Chr8:33754547-33754566 | None:intergenic | 40.0% | |
| GCCCATGAAATAACAACAGA+TGG | - | Chr8:33755200-33755219 | MsG0880043983.01.T01:intron | 40.0% | |
| ! | AGATTGGCATCACACTGATT+CGG | - | Chr8:33754639-33754658 | MsG0880043983.01.T01:CDS | 40.0% |
| AAGTAGTCCATCCAGCCATT+TGG | + | Chr8:33755425-33755444 | None:intergenic | 45.0% | |
| ATATTGACCCTCCAAATGGC+TGG | - | Chr8:33755411-33755430 | MsG0880043983.01.T01:CDS | 45.0% | |
| CATGAAACCAAGCTGCATGA+GGG | - | Chr8:33754613-33754632 | MsG0880043983.01.T01:CDS | 45.0% | |
| GAGGATATTGACCCTCCAAA+TGG | - | Chr8:33755407-33755426 | MsG0880043983.01.T01:CDS | 45.0% | |
| GGTACACACATGTCATGAGA+AGG | - | Chr8:33755226-33755245 | MsG0880043983.01.T01:intron | 45.0% | |
| GGTACTTACAAGCTCTTTGG+GGG | - | Chr8:33755278-33755297 | MsG0880043983.01.T01:intron | 45.0% | |
| TCATGAAACCAAGCTGCATG+AGG | - | Chr8:33754612-33754631 | MsG0880043983.01.T01:CDS | 45.0% | |
| TGATGCTCATCTTGTCAAGC+AGG | - | Chr8:33755466-33755485 | MsG0880043983.01.T01:CDS | 45.0% | |
| !! | ACACTGATTCGGTCAAACAC+TGG | - | Chr8:33754650-33754669 | MsG0880043983.01.T01:CDS | 45.0% |
| AGCTGCATGAGGGTGAAGAT+TGG | - | Chr8:33754623-33754642 | MsG0880043983.01.T01:CDS | 50.0% | |
| AGTCCATCCAGCCATTTGGA+GGG | + | Chr8:33755421-33755440 | None:intergenic | 50.0% | |
| ATCTTCACCCTCATGCAGCT+TGG | + | Chr8:33754623-33754642 | None:intergenic | 50.0% | |
| ATGGCACTGCTGCTGCTAAA+TGG | - | Chr8:33755360-33755379 | MsG0880043983.01.T01:CDS | 50.0% | |
| GGATCAAAACACCCGCTGAA+AGG | - | Chr8:33754533-33754552 | MsG0880043983.01.T01:CDS | 50.0% | |
| TAGTCCATCCAGCCATTTGG+AGG | + | Chr8:33755422-33755441 | None:intergenic | 50.0% | |
| TCATCTTGTCAAGCAGGCCA+AGG | - | Chr8:33755472-33755491 | MsG0880043983.01.T01:CDS | 50.0% | |
| TGACCCTCCAAATGGCTGGA+TGG | - | Chr8:33755415-33755434 | MsG0880043983.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 33754499 | 33755505 | 33754499 | ID=MsG0880043983.01;Name=MsG0880043983.01 |
| Chr8 | mRNA | 33754499 | 33755505 | 33754499 | ID=MsG0880043983.01.T01;Parent=MsG0880043983.01;Name=MsG0880043983.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|1|1|2|0|157 |
| Chr8 | exon | 33755319 | 33755505 | 33755319 | ID=MsG0880043983.01.T01:exon:10246;Parent=MsG0880043983.01.T01 |
| Chr8 | exon | 33754499 | 33754785 | 33754499 | ID=MsG0880043983.01.T01:exon:10245;Parent=MsG0880043983.01.T01 |
| Chr8 | CDS | 33755319 | 33755505 | 33755319 | ID=MsG0880043983.01.T01:cds;Parent=MsG0880043983.01.T01 |
| Chr8 | CDS | 33754499 | 33754785 | 33754499 | ID=MsG0880043983.01.T01:cds;Parent=MsG0880043983.01.T01 |
| Gene Sequence |
| Protein sequence |
