Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022018.01.T01 | KEH30742.1 | 49.281 | 278 | 84 | 8 | 128 | 363 | 623 | 885 | 5.80E-62 | 224 |
| MsG0480022018.01.T01 | KEH30742.1 | 93.878 | 98 | 6 | 0 | 115 | 212 | 336 | 433 | 3.75E-51 | 194 |
| MsG0480022018.01.T01 | KEH30742.1 | 83.582 | 67 | 11 | 0 | 49 | 115 | 165 | 231 | 7.34E-25 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022018.01.T01 | A0A072UM10 | 49.281 | 278 | 84 | 8 | 128 | 363 | 623 | 885 | 2.77e-62 | 224 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000470.01 | MsG0480022018.01 | 0.828930 | 6.835947e-55 | 6.892209e-52 |
| MsG0180004264.01 | MsG0480022018.01 | 0.817462 | 3.256809e-52 | 2.373473e-49 |
| MsG0180006134.01 | MsG0480022018.01 | 0.819333 | 1.226939e-52 | 9.413102e-50 |
| MsG0380014573.01 | MsG0480022018.01 | 0.805354 | 1.389907e-49 | 7.337632e-47 |
| MsG0480019435.01 | MsG0480022018.01 | 0.812263 | 4.630207e-51 | 2.930196e-48 |
| MsG0480022018.01 | MsG0480022068.01 | 0.801533 | 8.607782e-49 | 4.120689e-46 |
| MsG0480022018.01 | MsG0480022107.01 | 0.823972 | 1.038662e-53 | 9.079224e-51 |
| MsG0480022018.01 | MsG0580024305.01 | 0.807738 | 4.365957e-50 | 2.450867e-47 |
| MsG0480022018.01 | MsG0580024306.01 | 0.810948 | 8.940195e-51 | 5.463536e-48 |
| MsG0480022018.01 | MsG0580027833.01 | 0.829500 | 4.972546e-55 | 5.098261e-52 |
| MsG0480022018.01 | MsG0580029554.01 | 0.801647 | 8.158666e-49 | 3.916725e-46 |
| MsG0480022018.01 | MsG0680030995.01 | 0.802888 | 4.530138e-49 | 2.244703e-46 |
| MsG0480022018.01 | MsG0880045111.01 | 0.807602 | 4.665385e-50 | 2.609513e-47 |
| MsG0480022018.01 | MsG0880045736.01 | 0.805896 | 1.070000e-49 | 5.727885e-47 |
| MsG0480022018.01 | MsG0880046020.01 | 0.812429 | 4.258803e-51 | 2.707338e-48 |
| MsG0380017140.01 | MsG0480022018.01 | 0.803072 | 4.149834e-49 | 2.065781e-46 |
| MsG0280006770.01 | MsG0480022018.01 | 0.803047 | 4.200352e-49 | 2.089625e-46 |
| MsG0280009383.01 | MsG0480022018.01 | 0.805217 | 1.485011e-49 | 7.811976e-47 |
| MsG0280010443.01 | MsG0480022018.01 | 0.814262 | 1.685075e-51 | 1.125292e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022018.01.T01 | MTR_4g080777 | 49.281 | 278 | 84 | 8 | 128 | 363 | 623 | 885 | 7.03e-66 | 224 |
| MsG0480022018.01.T01 | MTR_4g080777 | 93.878 | 98 | 6 | 0 | 115 | 212 | 336 | 433 | 4.54e-55 | 194 |
| MsG0480022018.01.T01 | MTR_4g080777 | 83.582 | 67 | 11 | 0 | 49 | 115 | 165 | 231 | 8.89e-29 | 118 |
| MsG0480022018.01.T01 | MTR_4g080777 | 49.281 | 278 | 84 | 8 | 128 | 363 | 902 | 1164 | 1.93e-65 | 225 |
| MsG0480022018.01.T01 | MTR_4g080777 | 93.878 | 98 | 6 | 0 | 115 | 212 | 615 | 712 | 5.95e-55 | 195 |
| MsG0480022018.01.T01 | MTR_4g080777 | 83.582 | 67 | 11 | 0 | 49 | 115 | 444 | 510 | 8.59e-29 | 118 |
| MsG0480022018.01.T01 | MTR_6g038090 | 46.707 | 167 | 62 | 3 | 212 | 351 | 871 | 1037 | 2.40e-37 | 143 |
| MsG0480022018.01.T01 | MTR_6g038090 | 75.510 | 98 | 24 | 0 | 115 | 212 | 512 | 609 | 7.83e-35 | 136 |
| MsG0480022018.01.T01 | MTR_6g038090 | 74.627 | 67 | 17 | 0 | 49 | 115 | 340 | 406 | 6.99e-25 | 107 |
| MsG0480022018.01.T01 | MTR_6g038090 | 86.486 | 37 | 4 | 1 | 1 | 36 | 180 | 216 | 6.30e-11 | 64.7 |
| MsG0480022018.01.T01 | MTR_4g080803 | 90.909 | 66 | 6 | 0 | 305 | 370 | 33 | 98 | 4.78e-36 | 127 |
| MsG0480022018.01.T01 | MTR_4g081280 | 38.426 | 216 | 79 | 5 | 49 | 212 | 378 | 591 | 2.48e-30 | 123 |
| MsG0480022018.01.T01 | MTR_4g080930 | 46.203 | 158 | 52 | 3 | 212 | 369 | 264 | 388 | 5.84e-30 | 119 |
| MsG0480022018.01.T01 | MTR_4g080060 | 68.657 | 67 | 21 | 0 | 49 | 115 | 165 | 231 | 3.58e-22 | 98.6 |
| MsG0480022018.01.T01 | MTR_4g080060 | 40.984 | 122 | 64 | 3 | 92 | 212 | 313 | 427 | 1.86e-18 | 87.4 |
| MsG0480022018.01.T01 | MTR_4g080060 | 68.657 | 67 | 21 | 0 | 49 | 115 | 364 | 430 | 3.94e-22 | 98.6 |
| MsG0480022018.01.T01 | MTR_4g080060 | 46.316 | 95 | 46 | 1 | 118 | 212 | 537 | 626 | 1.74e-18 | 87.8 |
| MsG0480022018.01.T01 | MTR_4g081230 | 67.164 | 67 | 22 | 0 | 49 | 115 | 367 | 433 | 2.32e-21 | 96.3 |
| MsG0480022018.01.T01 | MTR_4g081230 | 40.000 | 135 | 73 | 6 | 118 | 251 | 541 | 668 | 5.28e-14 | 73.9 |
| MsG0480022018.01.T01 | MTR_4g081330 | 51.515 | 99 | 43 | 1 | 114 | 212 | 536 | 629 | 6.18e-21 | 95.1 |
| MsG0480022018.01.T01 | MTR_4g081330 | 58.209 | 67 | 28 | 0 | 49 | 115 | 366 | 432 | 6.18e-19 | 89.4 |
| MsG0480022018.01.T01 | MTR_4g081330 | 37.059 | 170 | 76 | 6 | 217 | 358 | 900 | 1066 | 1.22e-14 | 75.9 |
| MsG0480022018.01.T01 | MTR_2g083650 | 48.113 | 106 | 43 | 2 | 115 | 220 | 567 | 660 | 8.13e-21 | 94.7 |
| MsG0480022018.01.T01 | MTR_2g083650 | 46.269 | 67 | 36 | 0 | 49 | 115 | 396 | 462 | 2.22e-11 | 65.9 |
| MsG0480022018.01.T01 | MTR_4g081270 | 32.927 | 164 | 80 | 3 | 217 | 350 | 943 | 1106 | 1.49e-20 | 94.0 |
| MsG0480022018.01.T01 | MTR_4g081270 | 53.731 | 67 | 31 | 0 | 49 | 115 | 420 | 486 | 1.19e-14 | 76.3 |
| MsG0480022018.01.T01 | MTR_4g081270 | 53.247 | 77 | 36 | 0 | 136 | 212 | 646 | 722 | 2.30e-14 | 75.1 |
| MsG0480022018.01.T01 | MTR_4g080070 | 54.545 | 88 | 32 | 1 | 49 | 136 | 364 | 443 | 2.56e-20 | 93.2 |
| MsG0480022018.01.T01 | MTR_4g080070 | 43.443 | 122 | 60 | 4 | 92 | 212 | 513 | 626 | 9.13e-18 | 85.5 |
| MsG0480022018.01.T01 | MTR_4g080070 | 31.250 | 160 | 86 | 2 | 222 | 357 | 882 | 1041 | 3.92e-17 | 83.6 |
| MsG0480022018.01.T01 | MTR_2g083830 | 48.148 | 108 | 51 | 2 | 115 | 221 | 556 | 659 | 2.61e-20 | 93.2 |
| MsG0480022018.01.T01 | MTR_2g083830 | 53.731 | 67 | 31 | 0 | 49 | 115 | 385 | 451 | 1.85e-15 | 78.2 |
| MsG0480022018.01.T01 | MTR_4g080330 | 52.273 | 88 | 34 | 1 | 49 | 136 | 347 | 426 | 6.02e-20 | 92.0 |
| MsG0480022018.01.T01 | MTR_4g080330 | 45.349 | 86 | 47 | 0 | 127 | 212 | 527 | 612 | 2.40e-17 | 84.3 |
| MsG0480022018.01.T01 | MTR_4g080330 | 35.503 | 169 | 73 | 7 | 224 | 360 | 875 | 1039 | 4.69e-15 | 77.4 |
| MsG0480022018.01.T01 | MTR_4g080320 | 53.409 | 88 | 33 | 1 | 49 | 136 | 180 | 259 | 8.99e-20 | 91.7 |
| MsG0480022018.01.T01 | MTR_4g080320 | 41.667 | 108 | 53 | 3 | 110 | 212 | 341 | 443 | 1.71e-14 | 75.5 |
| MsG0480022018.01.T01 | MTR_4g080320 | 53.409 | 88 | 33 | 1 | 49 | 136 | 357 | 436 | 1.13e-19 | 91.3 |
| MsG0480022018.01.T01 | MTR_4g080320 | 41.667 | 108 | 53 | 3 | 110 | 212 | 518 | 620 | 2.10e-14 | 75.5 |
| MsG0480022018.01.T01 | MTR_6g087260 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 1.01e-18 | 88.6 |
| MsG0480022018.01.T01 | MTR_6g087260 | 31.455 | 213 | 104 | 10 | 118 | 314 | 537 | 723 | 2.95e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_6g088250 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 1.04e-18 | 88.6 |
| MsG0480022018.01.T01 | MTR_6g088250 | 46.875 | 96 | 40 | 2 | 118 | 212 | 537 | 622 | 1.15e-15 | 79.3 |
| MsG0480022018.01.T01 | MTR_6g088250 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 1.07e-18 | 88.6 |
| MsG0480022018.01.T01 | MTR_6g088250 | 46.875 | 96 | 40 | 2 | 118 | 212 | 537 | 622 | 1.23e-15 | 79.0 |
| MsG0480022018.01.T01 | MTR_6g088250 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 1.13e-18 | 88.2 |
| MsG0480022018.01.T01 | MTR_6g088250 | 46.875 | 96 | 40 | 2 | 118 | 212 | 537 | 622 | 1.14e-15 | 79.3 |
| MsG0480022018.01.T01 | MTR_6g088245 | 61.765 | 68 | 25 | 1 | 49 | 115 | 363 | 430 | 1.89e-18 | 87.8 |
| MsG0480022018.01.T01 | MTR_6g088245 | 49.275 | 69 | 34 | 1 | 145 | 212 | 557 | 625 | 1.16e-11 | 67.0 |
| MsG0480022018.01.T01 | MTR_5g005550 | 48.000 | 100 | 48 | 1 | 113 | 212 | 511 | 606 | 3.75e-18 | 86.7 |
| MsG0480022018.01.T01 | MTR_6g087850 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 4.25e-18 | 86.7 |
| MsG0480022018.01.T01 | MTR_2g083520 | 45.283 | 106 | 54 | 1 | 107 | 212 | 558 | 659 | 8.04e-18 | 85.9 |
| MsG0480022018.01.T01 | MTR_2g083520 | 53.731 | 67 | 31 | 0 | 49 | 115 | 395 | 461 | 1.89e-14 | 75.5 |
| MsG0480022018.01.T01 | MTR_2g039770 | 58.824 | 68 | 27 | 1 | 49 | 115 | 363 | 430 | 9.46e-18 | 85.5 |
| MsG0480022018.01.T01 | MTR_2g039770 | 39.640 | 111 | 62 | 3 | 107 | 212 | 513 | 623 | 1.51e-13 | 72.8 |
| MsG0480022018.01.T01 | MTR_2g083520 | 45.283 | 106 | 54 | 1 | 107 | 212 | 647 | 748 | 1.00e-17 | 85.5 |
| MsG0480022018.01.T01 | MTR_2g083520 | 53.731 | 67 | 31 | 0 | 49 | 115 | 484 | 550 | 2.11e-14 | 75.5 |
| MsG0480022018.01.T01 | MTR_4g081250 | 49.474 | 95 | 42 | 1 | 118 | 212 | 529 | 617 | 1.29e-17 | 85.1 |
| MsG0480022018.01.T01 | MTR_4g081250 | 61.765 | 68 | 25 | 1 | 49 | 115 | 354 | 421 | 3.20e-17 | 84.0 |
| MsG0480022018.01.T01 | MTR_4g081250 | 28.235 | 170 | 92 | 5 | 213 | 357 | 830 | 994 | 1.69e-11 | 66.2 |
| MsG0480022018.01.T01 | MTR_6g488300 | 58.209 | 67 | 27 | 1 | 49 | 114 | 363 | 429 | 1.71e-17 | 84.7 |
| MsG0480022018.01.T01 | MTR_6g488300 | 32.812 | 192 | 92 | 7 | 143 | 314 | 551 | 725 | 5.12e-15 | 77.4 |
| MsG0480022018.01.T01 | MTR_6g087200 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 1.83e-17 | 84.7 |
| MsG0480022018.01.T01 | MTR_6g087200 | 37.607 | 117 | 65 | 3 | 104 | 212 | 506 | 622 | 3.31e-15 | 77.8 |
| MsG0480022018.01.T01 | MTR_6g087200 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 2.11e-17 | 84.3 |
| MsG0480022018.01.T01 | MTR_6g087200 | 37.607 | 117 | 65 | 3 | 104 | 212 | 506 | 622 | 3.70e-15 | 77.8 |
| MsG0480022018.01.T01 | MTR_0428s0030 | 60.294 | 68 | 26 | 1 | 49 | 115 | 363 | 430 | 2.44e-17 | 84.3 |
| MsG0480022018.01.T01 | MTR_7g069180 | 49.383 | 81 | 41 | 0 | 132 | 212 | 570 | 650 | 2.59e-17 | 84.3 |
| MsG0480022018.01.T01 | MTR_7g069180 | 49.254 | 67 | 34 | 0 | 49 | 115 | 386 | 452 | 2.83e-12 | 68.6 |
| MsG0480022018.01.T01 | MTR_7g069100 | 48.148 | 81 | 42 | 0 | 132 | 212 | 558 | 638 | 2.66e-17 | 84.0 |
| MsG0480022018.01.T01 | MTR_6g084360 | 58.824 | 68 | 27 | 1 | 49 | 115 | 222 | 289 | 2.87e-17 | 84.0 |
| MsG0480022018.01.T01 | MTR_6g087320 | 58.824 | 68 | 27 | 1 | 49 | 115 | 363 | 430 | 3.32e-17 | 84.0 |
| MsG0480022018.01.T01 | MTR_6g087320 | 34.112 | 214 | 113 | 8 | 13 | 212 | 424 | 623 | 3.04e-16 | 80.9 |
| MsG0480022018.01.T01 | MTR_6g088260 | 58.824 | 68 | 27 | 1 | 49 | 115 | 363 | 430 | 4.11e-17 | 83.6 |
| MsG0480022018.01.T01 | MTR_6g088260 | 32.812 | 128 | 67 | 3 | 104 | 212 | 487 | 614 | 3.44e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_6g088260 | 58.824 | 68 | 27 | 1 | 49 | 115 | 363 | 430 | 4.13e-17 | 83.6 |
| MsG0480022018.01.T01 | MTR_6g088260 | 32.812 | 128 | 67 | 3 | 104 | 212 | 487 | 614 | 3.66e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_4g081290 | 47.368 | 95 | 47 | 2 | 119 | 212 | 516 | 608 | 4.20e-17 | 83.6 |
| MsG0480022018.01.T01 | MTR_7g069120 | 34.783 | 161 | 100 | 4 | 110 | 265 | 571 | 731 | 4.48e-17 | 83.6 |
| MsG0480022018.01.T01 | MTR_7g069120 | 47.692 | 65 | 34 | 0 | 49 | 113 | 411 | 475 | 9.04e-12 | 67.0 |
| MsG0480022018.01.T01 | MTR_7g069160 | 47.312 | 93 | 45 | 1 | 120 | 212 | 610 | 698 | 7.40e-17 | 82.8 |
| MsG0480022018.01.T01 | MTR_7g069160 | 37.288 | 118 | 63 | 2 | 19 | 125 | 394 | 511 | 6.92e-13 | 70.5 |
| MsG0480022018.01.T01 | MTR_7g069580 | 49.438 | 89 | 41 | 1 | 120 | 208 | 509 | 593 | 7.72e-17 | 82.8 |
| MsG0480022018.01.T01 | MTR_7g069160 | 50.617 | 81 | 40 | 0 | 132 | 212 | 618 | 698 | 7.75e-17 | 82.8 |
| MsG0480022018.01.T01 | MTR_7g069160 | 37.288 | 118 | 63 | 2 | 19 | 125 | 394 | 511 | 6.89e-13 | 70.5 |
| MsG0480022018.01.T01 | MTR_7g069160 | 47.312 | 93 | 45 | 1 | 120 | 212 | 616 | 704 | 7.75e-17 | 82.8 |
| MsG0480022018.01.T01 | MTR_7g069160 | 37.288 | 118 | 63 | 2 | 19 | 125 | 400 | 517 | 7.05e-13 | 70.5 |
| MsG0480022018.01.T01 | MTR_7g069160 | 47.312 | 93 | 45 | 1 | 120 | 212 | 618 | 706 | 7.83e-17 | 82.8 |
| MsG0480022018.01.T01 | MTR_7g069160 | 37.288 | 118 | 63 | 2 | 19 | 125 | 402 | 519 | 7.05e-13 | 70.5 |
| MsG0480022018.01.T01 | MTR_7g069580 | 49.438 | 89 | 41 | 1 | 120 | 208 | 183 | 267 | 1.20e-16 | 82.0 |
| MsG0480022018.01.T01 | MTR_6g088465 | 55.556 | 72 | 31 | 1 | 47 | 117 | 361 | 432 | 5.95e-16 | 80.1 |
| MsG0480022018.01.T01 | MTR_6g088465 | 50.704 | 71 | 30 | 2 | 145 | 212 | 557 | 625 | 2.34e-12 | 68.9 |
| MsG0480022018.01.T01 | MTR_6g027090 | 56.522 | 69 | 29 | 1 | 48 | 115 | 105 | 173 | 2.50e-15 | 77.0 |
| MsG0480022018.01.T01 | MTR_6g027090 | 44.000 | 100 | 43 | 4 | 118 | 213 | 280 | 370 | 2.23e-11 | 65.1 |
| MsG0480022018.01.T01 | MTR_4g021095 | 27.072 | 181 | 111 | 4 | 54 | 213 | 818 | 998 | 5.11e-15 | 77.4 |
| MsG0480022018.01.T01 | MTR_6g081080 | 57.143 | 56 | 24 | 0 | 60 | 115 | 33 | 88 | 1.69e-13 | 72.0 |
| MsG0480022018.01.T01 | MTR_7g078780 | 46.970 | 66 | 35 | 0 | 49 | 114 | 359 | 424 | 1.86e-13 | 72.4 |
| MsG0480022018.01.T01 | MTR_7g078780 | 46.970 | 66 | 35 | 0 | 49 | 114 | 359 | 424 | 1.88e-13 | 72.4 |
| MsG0480022018.01.T01 | MTR_7g078180 | 40.000 | 90 | 47 | 2 | 26 | 114 | 342 | 425 | 3.56e-13 | 71.6 |
| MsG0480022018.01.T01 | MTR_7g078770 | 43.939 | 66 | 37 | 0 | 49 | 114 | 366 | 431 | 1.19e-12 | 70.1 |
| MsG0480022018.01.T01 | MTR_7g091540 | 41.176 | 68 | 40 | 0 | 142 | 209 | 206 | 273 | 4.41e-12 | 67.8 |
| MsG0480022018.01.T01 | MTR_6g015475 | 35.714 | 98 | 57 | 2 | 115 | 212 | 560 | 651 | 1.17e-11 | 66.6 |
| MsG0480022018.01.T01 | MTR_4g081225 | 36.508 | 126 | 69 | 6 | 224 | 346 | 239 | 356 | 2.62e-11 | 64.7 |
| MsG0480022018.01.T01 | MTR_3g080470 | 42.424 | 66 | 38 | 0 | 49 | 114 | 355 | 420 | 2.80e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_3g080470 | 42.424 | 66 | 38 | 0 | 49 | 114 | 355 | 420 | 2.87e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_3g012470 | 40.000 | 85 | 43 | 1 | 49 | 133 | 351 | 427 | 3.11e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_3g080470 | 42.424 | 66 | 38 | 0 | 49 | 114 | 355 | 420 | 3.15e-11 | 65.5 |
| MsG0480022018.01.T01 | MTR_3g012470 | 40.000 | 85 | 43 | 1 | 49 | 133 | 351 | 427 | 3.43e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022018.01.T01 | AT5G40060 | 35.870 | 92 | 49 | 1 | 130 | 211 | 345 | 436 | 4.13e-12 | 68.2 |
| MsG0480022018.01.T01 | AT5G40060 | 35.870 | 92 | 49 | 1 | 130 | 211 | 345 | 436 | 5.28e-12 | 67.8 |
Find 81 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTATCATTGGATATTTA+AGG | 0.178468 | 4:-67080482 | MsG0480022018.01.T01:CDS |
| TCCACAGCATGAGCAATTTA+AGG | 0.189656 | 4:+67082144 | None:intergenic |
| CATTATGATCCAACTAATTT+AGG | 0.227029 | 4:-67080759 | MsG0480022018.01.T01:CDS |
| GAATCCAAGGAAAGAATTTA+TGG | 0.259262 | 4:-67082685 | MsG0480022018.01.T01:CDS |
| CCAGAACTCAAATTCCAATA+TGG | 0.273701 | 4:-67080885 | MsG0480022018.01.T01:CDS |
| CCATATTGGAATTTGAGTTC+TGG | 0.288196 | 4:+67080885 | None:intergenic |
| CCCAACACTTTAATTGCTAA+TGG | 0.290201 | 4:+67082768 | None:intergenic |
| TCAAGATGTATGGGAATAAC+TGG | 0.291789 | 4:+67080678 | None:intergenic |
| GCAGCCCCTTGGTTTGCATT+TGG | 0.309762 | 4:-67080518 | MsG0480022018.01.T01:CDS |
| ATTTGTGGAATGGGTGGAAT+AGG | 0.313714 | 4:-67083278 | MsG0480022018.01.T01:CDS |
| CATATTGGAATTTGAGTTCT+GGG | 0.314566 | 4:+67080886 | None:intergenic |
| GATAATGATGTTCGAGTTGT+AGG | 0.332565 | 4:-67083302 | MsG0480022018.01.T01:CDS |
| CTGTGGAATTTGAATTTCTC+AGG | 0.333076 | 4:-67082128 | MsG0480022018.01.T01:CDS |
| CCATTAGCAATTAAAGTGTT+GGG | 0.347495 | 4:-67082768 | MsG0480022018.01.T01:CDS |
| TTTGTTTGTTTAAACCATAT+TGG | 0.352963 | 4:+67080871 | None:intergenic |
| GTAGCAACATCAGGCAACTA+TGG | 0.368218 | 4:-67081992 | MsG0480022018.01.T01:CDS |
| ACATCCATAAATTCTTTCCT+TGG | 0.372310 | 4:+67082681 | None:intergenic |
| CATCCTTCACCTAAATTAGT+TGG | 0.372567 | 4:+67080750 | None:intergenic |
| GTCATTTGGGGTATCTCTGT+TGG | 0.376265 | 4:-67082085 | MsG0480022018.01.T01:CDS |
| GAAGGATGGTCACCTCATAT+TGG | 0.379545 | 4:-67080735 | MsG0480022018.01.T01:CDS |
| ACATCCCCTTCATGCATAAC+AGG | 0.393247 | 4:+67080816 | None:intergenic |
| TTGGATATTTAAGGAGGATC+TGG | 0.411696 | 4:-67080473 | MsG0480022018.01.T01:CDS |
| AAGGATGGTCACCTCATATT+GGG | 0.411777 | 4:-67080734 | MsG0480022018.01.T01:CDS |
| GCCCCTTGGTTTGCATTTGG+AGG | 0.416561 | 4:-67080515 | MsG0480022018.01.T01:CDS |
| TGGGTAACGCCGTAAAACTA+TGG | 0.417626 | 4:+67082232 | None:intergenic |
| TGGTCACCTCATATTGGGTT+CGG | 0.418862 | 4:-67080729 | MsG0480022018.01.T01:CDS |
| TCATTTGGGGTATCTCTGTT+GGG | 0.423431 | 4:-67082084 | MsG0480022018.01.T01:CDS |
| AGAAAATATTGAAGAAATAC+AGG | 0.423438 | 4:-67082210 | MsG0480022018.01.T01:CDS |
| ATTGAATTGTTAGCTGTAGT+TGG | 0.426582 | 4:-67080541 | MsG0480022018.01.T01:CDS |
| CATGCAGTCCGATCTTCCTA+TGG | 0.430543 | 4:-67080928 | MsG0480022018.01.T01:CDS |
| GCTGTAGTTGGGCAGCCCCT+TGG | 0.435876 | 4:-67080529 | MsG0480022018.01.T01:CDS |
| TCCATTAGCAATTAAAGTGT+TGG | 0.441966 | 4:-67082769 | MsG0480022018.01.T01:CDS |
| GTTCGAGTTGTAGGGATTTG+TGG | 0.442675 | 4:-67083293 | MsG0480022018.01.T01:CDS |
| ATCAGTTCAACAAGATTATC+CGG | 0.452103 | 4:+67082023 | None:intergenic |
| TTTGTGGAATGGGTGGAATA+GGG | 0.456745 | 4:-67083277 | MsG0480022018.01.T01:CDS |
| GCCGTAAAACTATGGCTTCA+AGG | 0.458153 | 4:+67082240 | None:intergenic |
| TGTGGGTAGTTCAATAATCA+TGG | 0.463424 | 4:-67080847 | MsG0480022018.01.T01:CDS |
| TCCTACCTCGTAGCAACATC+AGG | 0.468057 | 4:-67082001 | MsG0480022018.01.T01:CDS |
| TTATCCGGCTGAAAACTTGA+TGG | 0.482776 | 4:+67082038 | None:intergenic |
| AGTTGTAGGGATTTGTGGAA+TGG | 0.486328 | 4:-67083288 | MsG0480022018.01.T01:CDS |
| TTGAATTGTTAGCTGTAGTT+GGG | 0.488621 | 4:-67080540 | MsG0480022018.01.T01:CDS |
| CCATCACCTGTTATGCATGA+AGG | 0.488994 | 4:-67080822 | MsG0480022018.01.T01:CDS |
| ATGCATGAAGGGGATGTGAT+AGG | 0.492631 | 4:-67080810 | MsG0480022018.01.T01:CDS |
| AATTGCTAATGGAAGGCCAT+TGG | 0.500423 | 4:+67082779 | None:intergenic |
| GTTGTAGGGATTTGTGGAAT+GGG | 0.503659 | 4:-67083287 | MsG0480022018.01.T01:CDS |
| TGAAAACCGAACCCAATATG+AGG | 0.508016 | 4:+67080723 | None:intergenic |
| GATCCAACTAATTTAGGTGA+AGG | 0.524963 | 4:-67080753 | MsG0480022018.01.T01:CDS |
| AAGGGATTGCATGATATTAG+TGG | 0.527532 | 4:-67080565 | MsG0480022018.01.T01:CDS |
| TGGTTTAAACAAACAAAATG+TGG | 0.527729 | 4:-67080865 | MsG0480022018.01.T01:CDS |
| CAAATGATGCACAGTAGAAG+TGG | 0.529828 | 4:-67080436 | MsG0480022018.01.T01:CDS |
| ATAATGATGTTCGAGTTGTA+GGG | 0.540457 | 4:-67083301 | MsG0480022018.01.T01:CDS |
| CATCACCTGTTATGCATGAA+GGG | 0.544420 | 4:-67080821 | MsG0480022018.01.T01:CDS |
| CCTTCATGCATAACAGGTGA+TGG | 0.545161 | 4:+67080822 | None:intergenic |
| ACACTTTAATTGCTAATGGA+AGG | 0.548884 | 4:+67082772 | None:intergenic |
| ACAGGAGATGACAACATTGA+GGG | 0.558488 | 4:-67082192 | MsG0480022018.01.T01:CDS |
| GACCTCCAAATGCAAACCAA+GGG | 0.558894 | 4:+67080513 | None:intergenic |
| CATTAGCAATTAAAGTGTTG+GGG | 0.560753 | 4:-67082767 | MsG0480022018.01.T01:CDS |
| CAAGATTAAGAGAGAATCCA+AGG | 0.563933 | 4:-67082698 | MsG0480022018.01.T01:CDS |
| AAAAGTGATGATATCATGAA+CGG | 0.563951 | 4:-67082837 | MsG0480022018.01.T01:CDS |
| TGACCTCCAAATGCAAACCA+AGG | 0.566225 | 4:+67080512 | None:intergenic |
| ACAATATCAATCTGACCCAT+AGG | 0.566413 | 4:+67080912 | None:intergenic |
| CAACATCAGGCAACTATGGG+AGG | 0.569106 | 4:-67081988 | MsG0480022018.01.T01:CDS |
| AATCTGACCCATAGGAAGAT+CGG | 0.571177 | 4:+67080920 | None:intergenic |
| CTTGATGGCAAACAAGTGAA+AGG | 0.580679 | 4:+67082053 | None:intergenic |
| TAGCAACATCAGGCAACTAT+GGG | 0.584440 | 4:-67081991 | MsG0480022018.01.T01:CDS |
| CAACTAATTTAGGTGAAGGA+TGG | 0.586768 | 4:-67080749 | MsG0480022018.01.T01:CDS |
| GCCTTAAATTGCTCATGCTG+TGG | 0.587602 | 4:-67082145 | MsG0480022018.01.T01:CDS |
| GGTTTAAACAAACAAAATGT+GGG | 0.588753 | 4:-67080864 | MsG0480022018.01.T01:CDS |
| GTAGGGATTTGTGGAATGGG+TGG | 0.591904 | 4:-67083284 | MsG0480022018.01.T01:CDS |
| ATGCAGTCCGATCTTCCTAT+GGG | 0.592893 | 4:-67080927 | MsG0480022018.01.T01:CDS |
| CTCTGAATGGAGAAGTGCAT+TGG | 0.593373 | 4:-67082721 | MsG0480022018.01.T01:CDS |
| TACAGGAGATGACAACATTG+AGG | 0.602216 | 4:-67082193 | MsG0480022018.01.T01:CDS |
| GCAACTATGGGAGGGTACAA+AGG | 0.610415 | 4:-67081979 | MsG0480022018.01.T01:intron |
| ATCACCTGTTATGCATGAAG+GGG | 0.624554 | 4:-67080820 | MsG0480022018.01.T01:CDS |
| AACATCAGGCAACTATGGGA+GGG | 0.631061 | 4:-67081987 | MsG0480022018.01.T01:CDS |
| TTATCATTGGATATTTAAGG+AGG | 0.636446 | 4:-67080479 | MsG0480022018.01.T01:CDS |
| GATGTACTAACATATGCCAA+TGG | 0.637119 | 4:-67082795 | MsG0480022018.01.T01:CDS |
| ATGGTCGAGATGTCTCTGAA+TGG | 0.638750 | 4:-67082734 | MsG0480022018.01.T01:CDS |
| GCCTGATGTTGCTACGAGGT+AGG | 0.640724 | 4:+67082000 | None:intergenic |
| ACCTCCAAATGCAAACCAAG+GGG | 0.679849 | 4:+67080514 | None:intergenic |
| AGTTGCCTGATGTTGCTACG+AGG | 0.742338 | 4:+67081996 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAGAAAAATAGAATATT+CGG | - | Chr4:67082216-67082235 | MsG0480022018.01.T01:CDS | 15.0% |
| !!! | ATTATCATAATTTCTAGAAA+TGG | - | Chr4:67080781-67080800 | MsG0480022018.01.T01:CDS | 15.0% |
| !!! | TTATCATAATTTCTAGAAAT+GGG | - | Chr4:67080782-67080801 | MsG0480022018.01.T01:CDS | 15.0% |
| !! | AGAAAATATTGAAGAAATAC+AGG | - | Chr4:67081524-67081543 | MsG0480022018.01.T01:intron | 20.0% |
| !! | AGATATAGACAAAAAGAAAA+AGG | + | Chr4:67082734-67082753 | None:intergenic | 20.0% |
| !! | GTTAATCGATTATAGAAAAA+TGG | + | Chr4:67081417-67081436 | None:intergenic | 20.0% |
| !! | TATATGAATTGTATTACGAA+GGG | - | Chr4:67083151-67083170 | MsG0480022018.01.T01:intron | 20.0% |
| !! | TCATCAGAAAAAAAAAACAA+AGG | + | Chr4:67081802-67081821 | None:intergenic | 20.0% |
| !! | TTAATTTAAAAAGCCTTCTT+AGG | + | Chr4:67082085-67082104 | None:intergenic | 20.0% |
| !! | TTATATGAATTGTATTACGA+AGG | - | Chr4:67083150-67083169 | MsG0480022018.01.T01:intron | 20.0% |
| !! | TTTGTTTGTTTAAACCATAT+TGG | + | Chr4:67082866-67082885 | None:intergenic | 20.0% |
| !!! | GTATTTCTTCAATATTTTCT+GGG | + | Chr4:67081524-67081543 | None:intergenic | 20.0% |
| !!! | TGTATTTCTTCAATATTTTC+TGG | + | Chr4:67081525-67081544 | None:intergenic | 20.0% |
| !!! | TTTGGAGTTTTCAAAAAATT+TGG | + | Chr4:67081999-67082018 | None:intergenic | 20.0% |
| ! | AAAAGTGATGATATCATGAA+CGG | - | Chr4:67080897-67080916 | MsG0480022018.01.T01:CDS | 25.0% |
| ! | AAATTCAAAAATCGAAAGGA+TGG | + | Chr4:67082310-67082329 | None:intergenic | 25.0% |
| ! | ATAGACAAAAAGAAAAAGGA+TGG | + | Chr4:67082730-67082749 | None:intergenic | 25.0% |
| ! | ATATGTGTCAAATTATGTAG+AGG | + | Chr4:67081942-67081961 | None:intergenic | 25.0% |
| ! | ATTGCTTAGAAATCCTAATT+TGG | - | Chr4:67082451-67082470 | MsG0480022018.01.T01:intron | 25.0% |
| ! | CATTATGATCCAACTAATTT+AGG | - | Chr4:67082975-67082994 | MsG0480022018.01.T01:intron | 25.0% |
| ! | GATGATGTAAGTAGAATTTA+TGG | - | Chr4:67080545-67080564 | MsG0480022018.01.T01:CDS | 25.0% |
| ! | GGTTTAAACAAACAAAATGT+GGG | - | Chr4:67082870-67082889 | MsG0480022018.01.T01:intron | 25.0% |
| ! | TAACTAACTGTAGTTAAAGA+AGG | + | Chr4:67081855-67081874 | None:intergenic | 25.0% |
| ! | TAATACATTACCAATTTGTC+TGG | - | Chr4:67082772-67082791 | MsG0480022018.01.T01:CDS | 25.0% |
| ! | TAGTGAAAAAAGTTAGCAAA+AGG | + | Chr4:67083112-67083131 | None:intergenic | 25.0% |
| ! | TCAAAAATTGTGGTTATCAT+TGG | - | Chr4:67083242-67083261 | MsG0480022018.01.T01:CDS | 25.0% |
| ! | TCGAAAATTCAAAAATCGAA+AGG | + | Chr4:67082314-67082333 | None:intergenic | 25.0% |
| ! | TGGTTATCATTGGATATTTA+AGG | - | Chr4:67083252-67083271 | MsG0480022018.01.T01:CDS | 25.0% |
| ! | TGGTTTAAACAAACAAAATG+TGG | - | Chr4:67082869-67082888 | MsG0480022018.01.T01:intron | 25.0% |
| ! | TTATCATTGGATATTTAAGG+AGG | - | Chr4:67083255-67083274 | MsG0480022018.01.T01:CDS | 25.0% |
| ! | TTGCTTAGAAATCCTAATTT+GGG | - | Chr4:67082452-67082471 | MsG0480022018.01.T01:intron | 25.0% |
| ! | TTTCCTACAAAACAATTGAA+GGG | + | Chr4:67080871-67080890 | None:intergenic | 25.0% |
| !! | AATGTCATTTGCAATAATGT+AGG | - | Chr4:67081461-67081480 | MsG0480022018.01.T01:intron | 25.0% |
| !! | CATGTTCTTTTATGAAAAAG+AGG | - | Chr4:67081135-67081154 | MsG0480022018.01.T01:intron | 25.0% |
| !! | CCAAAAAATGTTTTTCTTAC+TGG | + | Chr4:67082599-67082618 | None:intergenic | 25.0% |
| !!! | AATTAGTTTTGATGGATTAG+AGG | - | Chr4:67081082-67081101 | MsG0480022018.01.T01:intron | 25.0% |
| !!! | ACTTTTCTTTCTAGTCATTT+GGG | - | Chr4:67081636-67081655 | MsG0480022018.01.T01:intron | 25.0% |
| !!! | AGATCTTTTTCAAGATGTAT+GGG | + | Chr4:67083068-67083087 | None:intergenic | 25.0% |
| !!! | CCAGTAAGAAAAACATTTTT+TGG | - | Chr4:67082596-67082615 | MsG0480022018.01.T01:intron | 25.0% |
| !!! | TTTGCTAACTTTTTTCACTA+AGG | - | Chr4:67083112-67083131 | MsG0480022018.01.T01:intron | 25.0% |
| AAAAAGAAAAAGGATGGAGT+AGG | + | Chr4:67082724-67082743 | None:intergenic | 30.0% | |
| ACAATGTTATCTCAGAAACA+TGG | - | Chr4:67081360-67081379 | MsG0480022018.01.T01:intron | 30.0% | |
| ACACTTTAATTGCTAATGGA+AGG | + | Chr4:67080965-67080984 | None:intergenic | 30.0% | |
| ACATCCATAAATTCTTTCCT+TGG | + | Chr4:67081056-67081075 | None:intergenic | 30.0% | |
| AGAACTCTTAAACCAATTTC+AGG | + | Chr4:67081201-67081220 | None:intergenic | 30.0% | |
| AGTTGAACAACTGGATAAAA+TGG | - | Chr4:67080720-67080739 | MsG0480022018.01.T01:CDS | 30.0% | |
| ATCAGTTCAACAAGATTATC+CGG | + | Chr4:67081714-67081733 | None:intergenic | 30.0% | |
| ATTGAATTGTTAGCTGTAGT+TGG | - | Chr4:67083193-67083212 | MsG0480022018.01.T01:intron | 30.0% | |
| CAAACTTAGACAATTGAACT+TGG | - | Chr4:67082520-67082539 | MsG0480022018.01.T01:intron | 30.0% | |
| CAAGTTCAATTGTCTAAGTT+TGG | + | Chr4:67082522-67082541 | None:intergenic | 30.0% | |
| CATACATCTTGAAAAAGATC+TGG | - | Chr4:67083067-67083086 | MsG0480022018.01.T01:intron | 30.0% | |
| CTTTCCTACAAAACAATTGA+AGG | + | Chr4:67080872-67080891 | None:intergenic | 30.0% | |
| GAATCCAAGGAAAGAATTTA+TGG | - | Chr4:67081049-67081068 | MsG0480022018.01.T01:intron | 30.0% | |
| TCAGATATGCAATCTTTCTA+TGG | - | Chr4:67080632-67080651 | MsG0480022018.01.T01:intron | 30.0% | |
| TCCATTAGCAATTAAAGTGT+TGG | - | Chr4:67080965-67080984 | MsG0480022018.01.T01:intron | 30.0% | |
| TGCTTAGAAATCCTAATTTG+GGG | - | Chr4:67082453-67082472 | MsG0480022018.01.T01:intron | 30.0% | |
| TTACCAATTTGTCTGGTATA+AGG | - | Chr4:67082779-67082798 | MsG0480022018.01.T01:CDS | 30.0% | |
| TTGAATTGTTAGCTGTAGTT+GGG | - | Chr4:67083194-67083213 | MsG0480022018.01.T01:intron | 30.0% | |
| ! | AGTATTCCTCACAACATTTT+TGG | - | Chr4:67082131-67082150 | MsG0480022018.01.T01:CDS | 30.0% |
| ! | CATATTGGAATTTGAGTTCT+GGG | + | Chr4:67082851-67082870 | None:intergenic | 30.0% |
| ! | CCATTAGCAATTAAAGTGTT+GGG | - | Chr4:67080966-67080985 | MsG0480022018.01.T01:intron | 30.0% |
| ! | CTGATGCTTCTTAAGTATTT+TGG | + | Chr4:67082194-67082213 | None:intergenic | 30.0% |
| !! | ATAATGATGTTCGAGTTGTA+GGG | - | Chr4:67080433-67080452 | MsG0480022018.01.T01:CDS | 30.0% |
| !! | CACTTTTCTTTCTAGTCATT+TGG | - | Chr4:67081635-67081654 | MsG0480022018.01.T01:intron | 30.0% |
| !! | CATTAGCAATTAAAGTGTTG+GGG | - | Chr4:67080967-67080986 | MsG0480022018.01.T01:intron | 30.0% |
| !! | CTTTTCTTTCTAGTCATTTG+GGG | - | Chr4:67081637-67081656 | MsG0480022018.01.T01:intron | 30.0% |
| !! | GTTATAGAATGGCTTTTTCT+TGG | - | Chr4:67082677-67082696 | MsG0480022018.01.T01:intron | 30.0% |
| !!! | CAGATCTTTTTCAAGATGTA+TGG | + | Chr4:67083069-67083088 | None:intergenic | 30.0% |
| !!! | GTACTTCGAATTAGTTTTGA+TGG | - | Chr4:67081074-67081093 | MsG0480022018.01.T01:intron | 30.0% |
| !!! | TTTTGATGGATTAGAGGATA+CGG | - | Chr4:67081088-67081107 | MsG0480022018.01.T01:intron | 30.0% |
| !!! | TTTTTTGGTAGATATGTAGC+TGG | - | Chr4:67082611-67082630 | MsG0480022018.01.T01:intron | 30.0% |
| AAAATCGAAAGGATGGCTTT+AGG | + | Chr4:67082303-67082322 | None:intergenic | 35.0% | |
| AAATCCCTAATGCTATTGGA+TGG | - | Chr4:67082424-67082443 | MsG0480022018.01.T01:intron | 35.0% | |
| AAATTGTTTCCCCCCAAATT+AGG | + | Chr4:67082467-67082486 | None:intergenic | 35.0% | |
| AAGGGATTGCATGATATTAG+TGG | - | Chr4:67083169-67083188 | MsG0480022018.01.T01:intron | 35.0% | |
| ACAATATCAATCTGACCCAT+AGG | + | Chr4:67082825-67082844 | None:intergenic | 35.0% | |
| AGATCTAGCAACTCAAGATT+TGG | + | Chr4:67082017-67082036 | None:intergenic | 35.0% | |
| AGTAGAATTTATGGAGACGA+TGG | - | Chr4:67080554-67080573 | MsG0480022018.01.T01:CDS | 35.0% | |
| AGTATACAAAGTTCAACTCC+TGG | - | Chr4:67080833-67080852 | MsG0480022018.01.T01:CDS | 35.0% | |
| ATCATTCATTACCTGTGAGA+AGG | - | Chr4:67081230-67081249 | MsG0480022018.01.T01:intron | 35.0% | |
| ATGTGAGATAAAATCCCTTG+TGG | - | Chr4:67080678-67080697 | MsG0480022018.01.T01:CDS | 35.0% | |
| CAACTAATTTAGGTGAAGGA+TGG | - | Chr4:67082985-67083004 | MsG0480022018.01.T01:intron | 35.0% | |
| CAAGATTAAGAGAGAATCCA+AGG | - | Chr4:67081036-67081055 | MsG0480022018.01.T01:intron | 35.0% | |
| CATCCTTCACCTAAATTAGT+TGG | + | Chr4:67082987-67083006 | None:intergenic | 35.0% | |
| CATTTGGAGGTCAAAAATTG+TGG | - | Chr4:67083232-67083251 | MsG0480022018.01.T01:CDS | 35.0% | |
| CCAGAACTCAAATTCCAATA+TGG | - | Chr4:67082849-67082868 | MsG0480022018.01.T01:CDS | 35.0% | |
| CCCAACACTTTAATTGCTAA+TGG | + | Chr4:67080969-67080988 | None:intergenic | 35.0% | |
| CGTTCCATCTCAATTAAACT+GGG | + | Chr4:67082655-67082674 | None:intergenic | 35.0% | |
| CTCAAACATCTAAATCTCTC+AGG | - | Chr4:67082164-67082183 | MsG0480022018.01.T01:CDS | 35.0% | |
| CTGTGGAATTTGAATTTCTC+AGG | - | Chr4:67081606-67081625 | MsG0480022018.01.T01:intron | 35.0% | |
| CTTAGAAATCCTAATTTGGG+GGG | - | Chr4:67082455-67082474 | MsG0480022018.01.T01:intron | 35.0% | |
| CTTCAAATCCCTAATGCTAT+TGG | - | Chr4:67082420-67082439 | MsG0480022018.01.T01:intron | 35.0% | |
| GATCCAACTAATTTAGGTGA+AGG | - | Chr4:67082981-67083000 | MsG0480022018.01.T01:intron | 35.0% | |
| GATGTACTAACATATGCCAA+TGG | - | Chr4:67080939-67080958 | MsG0480022018.01.T01:intron | 35.0% | |
| GCTTAGAAATCCTAATTTGG+GGG | - | Chr4:67082454-67082473 | MsG0480022018.01.T01:intron | 35.0% | |
| GTAACCATCCAATAGCATTA+GGG | + | Chr4:67082431-67082450 | None:intergenic | 35.0% | |
| GTTCCATCTCAATTAAACTG+GGG | + | Chr4:67082654-67082673 | None:intergenic | 35.0% | |
| TACATTACCTTCTAGCATCA+AGG | - | Chr4:67082490-67082509 | MsG0480022018.01.T01:intron | 35.0% | |
| TCAAGATGTATGGGAATAAC+TGG | + | Chr4:67083059-67083078 | None:intergenic | 35.0% | |
| TCATTCATTACCTGTGAGAA+GGG | - | Chr4:67081231-67081250 | MsG0480022018.01.T01:intron | 35.0% | |
| TGAACAACTGGATAAAATGG+TGG | - | Chr4:67080723-67080742 | MsG0480022018.01.T01:CDS | 35.0% | |
| TGTAACCATCCAATAGCATT+AGG | + | Chr4:67082432-67082451 | None:intergenic | 35.0% | |
| TGTGGGTAGTTCAATAATCA+TGG | - | Chr4:67082887-67082906 | MsG0480022018.01.T01:intron | 35.0% | |
| TTCGGAGATGCTTGATAAAA+AGG | - | Chr4:67082234-67082253 | MsG0480022018.01.T01:CDS | 35.0% | |
| TTGGATATTTAAGGAGGATC+TGG | - | Chr4:67083261-67083280 | MsG0480022018.01.T01:CDS | 35.0% | |
| ! | CCATATTGGAATTTGAGTTC+TGG | + | Chr4:67082852-67082871 | None:intergenic | 35.0% |
| ! | GAAGAGAGTTTAGATTTTCG+TGG | - | Chr4:67081168-67081187 | MsG0480022018.01.T01:intron | 35.0% |
| ! | GAGAAGGGGAGAATTTTTAT+GGG | - | Chr4:67081246-67081265 | MsG0480022018.01.T01:intron | 35.0% |
| ! | GGTTTTCAAAGTAAACAGTG+TGG | - | Chr4:67083026-67083045 | MsG0480022018.01.T01:intron | 35.0% |
| ! | TATGGGTTGTTCAAAGAACT+AGG | - | Chr4:67081263-67081282 | MsG0480022018.01.T01:intron | 35.0% |
| ! | TGAGAAGGGGAGAATTTTTA+TGG | - | Chr4:67081245-67081264 | MsG0480022018.01.T01:intron | 35.0% |
| !! | ACCTTGAAGCCATAGTTTTA+CGG | - | Chr4:67081493-67081512 | MsG0480022018.01.T01:intron | 35.0% |
| !! | ATGCCCTTCAATTGTTTTGT+AGG | - | Chr4:67080865-67080884 | MsG0480022018.01.T01:CDS | 35.0% |
| !! | GATAATGATGTTCGAGTTGT+AGG | - | Chr4:67080432-67080451 | MsG0480022018.01.T01:CDS | 35.0% |
| !! | GCATCTAATTGATTCGAACT+AGG | - | Chr4:67080654-67080673 | MsG0480022018.01.T01:intron | 35.0% |
| !!! | AGTTGCTTTTGTACTCCAAT+TGG | + | Chr4:67080581-67080600 | None:intergenic | 35.0% |
| !!! | GTTGCTTTTGTACTCCAATT+GGG | + | Chr4:67080580-67080599 | None:intergenic | 35.0% |
| AAAAATTCTCCCCTTCTCAC+AGG | + | Chr4:67081244-67081263 | None:intergenic | 40.0% | |
| AAGCCTTCTTAGGATACCAA+TGG | + | Chr4:67082075-67082094 | None:intergenic | 40.0% | |
| AAGGATGGTCACCTCATATT+GGG | - | Chr4:67083000-67083019 | MsG0480022018.01.T01:intron | 40.0% | |
| AATCTGACCCATAGGAAGAT+CGG | + | Chr4:67082817-67082836 | None:intergenic | 40.0% | |
| AATTGCTAATGGAAGGCCAT+TGG | + | Chr4:67080958-67080977 | None:intergenic | 40.0% | |
| ACAGGAGATGACAACATTGA+GGG | - | Chr4:67081542-67081561 | MsG0480022018.01.T01:intron | 40.0% | |
| ACTGGCAAGACAGTATTTGA+TGG | + | Chr4:67082581-67082600 | None:intergenic | 40.0% | |
| AGAAATGGGCATATCTTGAG+AGG | - | Chr4:67080796-67080815 | MsG0480022018.01.T01:CDS | 40.0% | |
| AGTTGTAGGGATTTGTGGAA+TGG | - | Chr4:67080446-67080465 | MsG0480022018.01.T01:CDS | 40.0% | |
| ATCACCTGTTATGCATGAAG+GGG | - | Chr4:67082914-67082933 | MsG0480022018.01.T01:intron | 40.0% | |
| ATTTGTGGAATGGGTGGAAT+AGG | - | Chr4:67080456-67080475 | MsG0480022018.01.T01:CDS | 40.0% | |
| CAAATGATGCACAGTAGAAG+TGG | - | Chr4:67083298-67083317 | MsG0480022018.01.T01:CDS | 40.0% | |
| CATCACCTGTTATGCATGAA+GGG | - | Chr4:67082913-67082932 | MsG0480022018.01.T01:intron | 40.0% | |
| CATCCATTGGTATCCTAAGA+AGG | - | Chr4:67082069-67082088 | MsG0480022018.01.T01:CDS | 40.0% | |
| CATTCATTACCTGTGAGAAG+GGG | - | Chr4:67081232-67081251 | MsG0480022018.01.T01:intron | 40.0% | |
| CCACTTATCAAGAACCACAA+GGG | + | Chr4:67080695-67080714 | None:intergenic | 40.0% | |
| CCTTGTGGTTCTTGATAAGT+GGG | - | Chr4:67080693-67080712 | MsG0480022018.01.T01:CDS | 40.0% | |
| CGAAAACGTGAAGATTCAGT+TGG | - | Chr4:67082331-67082350 | MsG0480022018.01.T01:intron | 40.0% | |
| CGTGGATTTCATCCTGAAAT+TGG | - | Chr4:67081186-67081205 | MsG0480022018.01.T01:intron | 40.0% | |
| CTCAGACCAAAAATGTTGTG+AGG | + | Chr4:67082140-67082159 | None:intergenic | 40.0% | |
| CTGGCAAGACAGTATTTGAT+GGG | + | Chr4:67082580-67082599 | None:intergenic | 40.0% | |
| CTTCTTAGGATACCAATGGA+TGG | + | Chr4:67082071-67082090 | None:intergenic | 40.0% | |
| GAAAGTTCCTTGATGCTAGA+AGG | + | Chr4:67082500-67082519 | None:intergenic | 40.0% | |
| GACATAAAACGAGAATGGCT+AGG | - | Chr4:67080745-67080764 | MsG0480022018.01.T01:CDS | 40.0% | |
| GATGGAACGCTGTTATAGAA+TGG | - | Chr4:67082666-67082685 | MsG0480022018.01.T01:intron | 40.0% | |
| GATTGCAGAAACTTATGTCC+AGG | + | Chr4:67082398-67082417 | None:intergenic | 40.0% | |
| GCACCTTATACCAGACAAAT+TGG | + | Chr4:67082785-67082804 | None:intergenic | 40.0% | |
| GCGTTCCATCTCAATTAAAC+TGG | + | Chr4:67082656-67082675 | None:intergenic | 40.0% | |
| GTTCAGATTGATCCATCCAT+TGG | - | Chr4:67082056-67082075 | MsG0480022018.01.T01:CDS | 40.0% | |
| GTTGTAGGGATTTGTGGAAT+GGG | - | Chr4:67080447-67080466 | MsG0480022018.01.T01:CDS | 40.0% | |
| TACAGGAGATGACAACATTG+AGG | - | Chr4:67081541-67081560 | MsG0480022018.01.T01:intron | 40.0% | |
| TAGCAACATCAGGCAACTAT+GGG | - | Chr4:67081743-67081762 | MsG0480022018.01.T01:intron | 40.0% | |
| TCCACAGCATGAGCAATTTA+AGG | + | Chr4:67081593-67081612 | None:intergenic | 40.0% | |
| TGAAAACCGAACCCAATATG+AGG | + | Chr4:67083014-67083033 | None:intergenic | 40.0% | |
| TTATCCGGCTGAAAACTTGA+TGG | + | Chr4:67081699-67081718 | None:intergenic | 40.0% | |
| TTGGATGATACAACTCCTTG+AGG | - | Chr4:67082696-67082715 | MsG0480022018.01.T01:CDS | 40.0% | |
| TTTGTGGAATGGGTGGAATA+GGG | - | Chr4:67080457-67080476 | MsG0480022018.01.T01:CDS | 40.0% | |
| ! | CTTGAGTTGCTAGATCTTGA+AGG | - | Chr4:67082020-67082039 | MsG0480022018.01.T01:CDS | 40.0% |
| ! | CTTGATGGCAAACAAGTGAA+AGG | + | Chr4:67081684-67081703 | None:intergenic | 40.0% |
| ! | GTGTTGGGGACATTTTTGTA+TGG | - | Chr4:67080981-67081000 | MsG0480022018.01.T01:intron | 40.0% |
| ! | TCATTTGGGGTATCTCTGTT+GGG | - | Chr4:67081650-67081669 | MsG0480022018.01.T01:intron | 40.0% |
| ! | TGGATTAGAGGATACGGAAA+AGG | - | Chr4:67081094-67081113 | MsG0480022018.01.T01:intron | 40.0% |
| ! | TGGTGGACATAAAACGAGAA+TGG | - | Chr4:67080740-67080759 | MsG0480022018.01.T01:CDS | 40.0% |
| ! | TTCCACTTTCTTGGCTCTTT+GGG | + | Chr4:67081314-67081333 | None:intergenic | 40.0% |
| ! | TTTGCCATCAAGTTTTCAGC+CGG | - | Chr4:67081692-67081711 | MsG0480022018.01.T01:intron | 40.0% |
| AACATCAGGCAACTATGGGA+GGG | - | Chr4:67081747-67081766 | MsG0480022018.01.T01:intron | 45.0% | |
| AAGAAAGTGGAACAGGCTGT+GGG | - | Chr4:67081322-67081341 | MsG0480022018.01.T01:intron | 45.0% | |
| AAGAGCCAAGAAAGTGGAAC+AGG | - | Chr4:67081315-67081334 | MsG0480022018.01.T01:intron | 45.0% | |
| ACAGTATTTGATGGGAGCTC+AGG | + | Chr4:67082572-67082591 | None:intergenic | 45.0% | |
| ACATCCCCTTCATGCATAAC+AGG | + | Chr4:67082921-67082940 | None:intergenic | 45.0% | |
| ACCTCCAAATGCAAACCAAG+GGG | + | Chr4:67083223-67083242 | None:intergenic | 45.0% | |
| AGATCTGGTGACAGTTGAGT+TGG | - | Chr4:67083082-67083101 | MsG0480022018.01.T01:intron | 45.0% | |
| ATGCAGTCCGATCTTCCTAT+GGG | - | Chr4:67082807-67082826 | MsG0480022018.01.T01:CDS | 45.0% | |
| ATGCATGAAGGGGATGTGAT+AGG | - | Chr4:67082924-67082943 | MsG0480022018.01.T01:intron | 45.0% | |
| ATGGTCGAGATGTCTCTGAA+TGG | - | Chr4:67081000-67081019 | MsG0480022018.01.T01:intron | 45.0% | |
| CCATCACCTGTTATGCATGA+AGG | - | Chr4:67082912-67082931 | MsG0480022018.01.T01:intron | 45.0% | |
| CCCACTTATCAAGAACCACA+AGG | + | Chr4:67080696-67080715 | None:intergenic | 45.0% | |
| CCCTTGTGGTTCTTGATAAG+TGG | - | Chr4:67080692-67080711 | MsG0480022018.01.T01:CDS | 45.0% | |
| CCTTCATGCATAACAGGTGA+TGG | + | Chr4:67082915-67082934 | None:intergenic | 45.0% | |
| CTGCCCCAGTTTAATTGAGA+TGG | - | Chr4:67082648-67082667 | MsG0480022018.01.T01:intron | 45.0% | |
| GAAGGATGGTCACCTCATAT+TGG | - | Chr4:67082999-67083018 | MsG0480022018.01.T01:intron | 45.0% | |
| GACCTCCAAATGCAAACCAA+GGG | + | Chr4:67083224-67083243 | None:intergenic | 45.0% | |
| GCCGTAAAACTATGGCTTCA+AGG | + | Chr4:67081497-67081516 | None:intergenic | 45.0% | |
| GCCTTAAATTGCTCATGCTG+TGG | - | Chr4:67081589-67081608 | MsG0480022018.01.T01:intron | 45.0% | |
| GTAGCAACATCAGGCAACTA+TGG | - | Chr4:67081742-67081761 | MsG0480022018.01.T01:intron | 45.0% | |
| GTCTGTCATGTTGCAATACC+TGG | - | Chr4:67082377-67082396 | MsG0480022018.01.T01:intron | 45.0% | |
| GTGGGATGAAGTTGAACAAC+TGG | - | Chr4:67080711-67080730 | MsG0480022018.01.T01:CDS | 45.0% | |
| TGACCTCCAAATGCAAACCA+AGG | + | Chr4:67083225-67083244 | None:intergenic | 45.0% | |
| TGGGCATATCTTGAGAGGTA+TGG | - | Chr4:67080801-67080820 | MsG0480022018.01.T01:CDS | 45.0% | |
| TGGGTAACGCCGTAAAACTA+TGG | + | Chr4:67081505-67081524 | None:intergenic | 45.0% | |
| TGGTCACCTCATATTGGGTT+CGG | - | Chr4:67083005-67083024 | MsG0480022018.01.T01:intron | 45.0% | |
| ! | CTCTGAATGGAGAAGTGCAT+TGG | - | Chr4:67081013-67081032 | MsG0480022018.01.T01:intron | 45.0% |
| ! | CTTGAGAGGTATGGAGTAGA+TGG | - | Chr4:67080810-67080829 | MsG0480022018.01.T01:CDS | 45.0% |
| ! | GCACGATGTTGACTGGTATT+GGG | + | Chr4:67082269-67082288 | None:intergenic | 45.0% |
| ! | GTCATTTGGGGTATCTCTGT+TGG | - | Chr4:67081649-67081668 | MsG0480022018.01.T01:intron | 45.0% |
| ! | GTTCCACTTTCTTGGCTCTT+TGG | + | Chr4:67081315-67081334 | None:intergenic | 45.0% |
| ! | TGCACGATGTTGACTGGTAT+TGG | + | Chr4:67082270-67082289 | None:intergenic | 45.0% |
| !! | GTTCGAGTTGTAGGGATTTG+TGG | - | Chr4:67080441-67080460 | MsG0480022018.01.T01:CDS | 45.0% |
| AAACGAGAATGGCTAGGCAC+AGG | - | Chr4:67080751-67080770 | MsG0480022018.01.T01:CDS | 50.0% | |
| AACGAGAATGGCTAGGCACA+GGG | - | Chr4:67080752-67080771 | MsG0480022018.01.T01:CDS | 50.0% | |
| AGTTGCCTGATGTTGCTACG+AGG | + | Chr4:67081741-67081760 | None:intergenic | 50.0% | |
| CAACATCAGGCAACTATGGG+AGG | - | Chr4:67081746-67081765 | MsG0480022018.01.T01:intron | 50.0% | |
| CAAGAAAGTGGAACAGGCTG+TGG | - | Chr4:67081321-67081340 | MsG0480022018.01.T01:intron | 50.0% | |
| CACAGCCTGTTCCACTTTCT+TGG | + | Chr4:67081323-67081342 | None:intergenic | 50.0% | |
| CACCCAAAGAGCCAAGAAAG+TGG | - | Chr4:67081309-67081328 | MsG0480022018.01.T01:intron | 50.0% | |
| CATGACAGACGAGACAACGA+AGG | + | Chr4:67082367-67082386 | None:intergenic | 50.0% | |
| CATGCAGTCCGATCTTCCTA+TGG | - | Chr4:67082806-67082825 | MsG0480022018.01.T01:CDS | 50.0% | |
| GTAGGGATTTGTGGAATGGG+TGG | - | Chr4:67080450-67080469 | MsG0480022018.01.T01:CDS | 50.0% | |
| TATGGAGACGATGGCCCAAT+TGG | - | Chr4:67080563-67080582 | MsG0480022018.01.T01:CDS | 50.0% | |
| TCCTACCTCGTAGCAACATC+AGG | - | Chr4:67081733-67081752 | MsG0480022018.01.T01:intron | 50.0% | |
| TGTGGATGCACGATGTTGAC+TGG | + | Chr4:67082276-67082295 | None:intergenic | 50.0% | |
| ! | GCAACTATGGGAGGGTACAA+AGG | - | Chr4:67081755-67081774 | MsG0480022018.01.T01:intron | 50.0% |
| !! | AGGATGGCTTTAGGACTCTG+TGG | + | Chr4:67082294-67082313 | None:intergenic | 50.0% |
| !! | GAAGGGCATCATTACGATCC+AGG | + | Chr4:67080854-67080873 | None:intergenic | 50.0% |
| AGGATGGAGTAGGCACCTCA+AGG | + | Chr4:67082714-67082733 | None:intergenic | 55.0% | |
| GAACAGGCTGTGGGACTACA+AGG | - | Chr4:67081331-67081350 | MsG0480022018.01.T01:intron | 55.0% | |
| GCCTGATGTTGCTACGAGGT+AGG | + | Chr4:67081737-67081756 | None:intergenic | 55.0% | |
| !! | GCAGCCCCTTGGTTTGCATT+TGG | - | Chr4:67083216-67083235 | MsG0480022018.01.T01:CDS | 55.0% |
| !! | GCCCCTTGGTTTGCATTTGG+AGG | - | Chr4:67083219-67083238 | MsG0480022018.01.T01:CDS | 55.0% |
| GCTGTAGTTGGGCAGCCCCT+TGG | - | Chr4:67083205-67083224 | MsG0480022018.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 67080396 | 67083360 | 67080396 | ID=MsG0480022018.01;Name=MsG0480022018.01 |
| Chr4 | mRNA | 67080396 | 67083360 | 67080396 | ID=MsG0480022018.01.T01;Parent=MsG0480022018.01;Name=MsG0480022018.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|370 |
| Chr4 | exon | 67083206 | 67083360 | 67083206 | ID=MsG0480022018.01.T01:exon:18337;Parent=MsG0480022018.01.T01 |
| Chr4 | exon | 67082683 | 67082869 | 67082683 | ID=MsG0480022018.01.T01:exon:18336;Parent=MsG0480022018.01.T01 |
| Chr4 | exon | 67081980 | 67082273 | 67081980 | ID=MsG0480022018.01.T01:exon:18335;Parent=MsG0480022018.01.T01 |
| Chr4 | exon | 67080668 | 67080955 | 67080668 | ID=MsG0480022018.01.T01:exon:18334;Parent=MsG0480022018.01.T01 |
| Chr4 | exon | 67080396 | 67080584 | 67080396 | ID=MsG0480022018.01.T01:exon:18333;Parent=MsG0480022018.01.T01 |
| Chr4 | CDS | 67083206 | 67083360 | 67083206 | ID=MsG0480022018.01.T01:cds;Parent=MsG0480022018.01.T01 |
| Chr4 | CDS | 67082683 | 67082869 | 67082683 | ID=MsG0480022018.01.T01:cds;Parent=MsG0480022018.01.T01 |
| Chr4 | CDS | 67081980 | 67082273 | 67081980 | ID=MsG0480022018.01.T01:cds;Parent=MsG0480022018.01.T01 |
| Chr4 | CDS | 67080668 | 67080955 | 67080668 | ID=MsG0480022018.01.T01:cds;Parent=MsG0480022018.01.T01 |
| Chr4 | CDS | 67080396 | 67080584 | 67080396 | ID=MsG0480022018.01.T01:cds;Parent=MsG0480022018.01.T01 |
| Gene Sequence |
| Protein sequence |
