AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019435.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019435.01.T01 MTR_4g032240 76.786 224 38 1 1 224 1 210 1.11e-115 335
MsG0480019435.01.T01 MTR_4g032240 74.242 66 17 0 181 246 283 348 8.95e-23 95.5
MsG0480019435.01.T01 MTR_4g032220 93.333 180 12 0 1 180 1 180 1.47e-108 317
MsG0480019435.01.T01 MTR_4g032220 80.597 67 12 1 181 246 281 347 5.56e-25 101
MsG0480019435.01.T01 MTR_4g032300 68.508 181 46 2 2 180 1 172 3.45e-86 259
MsG0480019435.01.T01 MTR_4g032300 58.209 67 27 1 181 246 274 340 5.23e-14 70.9
MsG0480019435.01.T01 MTR_4g032350 70.349 172 45 1 9 180 10 175 6.48e-84 254
MsG0480019435.01.T01 MTR_4g032350 64.407 59 21 0 181 239 276 334 2.60e-14 72.0
MsG0480019435.01.T01 MTR_4g032330 55.556 72 31 1 176 246 12 83 5.12e-16 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019435.01.T01 AT1G33970 62.011 179 58 2 2 180 6 174 2.71e-67 211
MsG0480019435.01.T01 AT1G33970 62.011 179 58 2 2 180 6 174 2.71e-67 211
MsG0480019435.01.T01 AT1G33970 62.011 179 58 2 2 180 6 174 2.71e-67 211
MsG0480019435.01.T01 AT1G33970 62.011 179 58 2 2 180 6 174 2.71e-67 211
MsG0480019435.01.T01 AT1G33970 62.011 179 58 2 2 180 6 174 3.14e-67 209
MsG0480019435.01.T01 AT1G33950 60.256 156 62 0 25 180 12 167 7.39e-67 209
MsG0480019435.01.T01 AT1G33960 62.577 163 57 1 18 180 35 193 1.22e-65 207
MsG0480019435.01.T01 AT1G33960 62.577 163 57 1 18 180 59 217 2.63e-65 207
MsG0480019435.01.T01 AT1G33930 56.977 172 65 1 9 180 24 186 4.56e-64 203
MsG0480019435.01.T01 AT4G09940 56.954 151 65 0 21 171 39 189 7.32e-62 199
MsG0480019435.01.T01 AT4G09940 56.954 151 65 0 21 171 82 232 4.68e-61 198
MsG0480019435.01.T01 AT1G33950 59.615 156 57 2 25 180 12 161 5.73e-61 194
MsG0480019435.01.T01 AT1G33900 56.173 162 70 1 25 185 14 175 5.56e-60 192
MsG0480019435.01.T01 AT4G09950 54.037 161 72 2 17 177 5 163 1.58e-55 181
MsG0480019435.01.T01 AT2G26820 39.184 245 111 2 30 236 6 250 7.37e-55 180
MsG0480019435.01.T01 AT2G26820 39.184 245 111 2 30 236 6 250 1.02e-54 180
MsG0480019435.01.T01 AT2G26820 39.184 245 111 2 30 236 6 250 7.15e-54 180
MsG0480019435.01.T01 AT2G26820 39.184 245 111 2 30 236 6 250 1.19e-53 180
MsG0480019435.01.T01 AT1G33890 56.291 151 66 0 30 180 14 164 8.53e-52 171
MsG0480019435.01.T01 AT1G33890 56.291 151 66 0 30 180 14 164 8.53e-52 171
MsG0480019435.01.T01 AT1G33910 54.140 157 65 2 25 180 8 158 3.53e-51 169
MsG0480019435.01.T01 AT4G09930 47.093 172 89 1 2 173 1 170 9.57e-50 166
MsG0480019435.01.T01 AT1G33830 50.000 148 74 0 32 179 11 158 1.34e-47 157
MsG0480019435.01.T01 AT1G33880 42.384 151 81 2 29 179 23 167 1.46e-40 139
MsG0480019435.01.T01 AT1G33880 42.384 151 81 2 29 179 23 167 1.46e-40 139
MsG0480019435.01.T01 AT1G33870 50.000 126 63 0 54 179 1 126 4.36e-39 136
MsG0480019435.01.T01 AT4G09950 53.125 96 43 2 82 177 7 100 4.65e-27 105

Find 66 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAGCTTGCAGACATTATT+TGG 0.116982 4:+20356000 MsG0480019435.01.T01:CDS
TCTGCTGGATCTGAGTTTAT+TGG 0.235468 4:+20355871 MsG0480019435.01.T01:CDS
GCAACCGGTAATAGTATTAT+TGG 0.242098 4:+20355122 MsG0480019435.01.T01:CDS
GATACACTTGCCGATTATTT+AGG 0.253738 4:+20356087 MsG0480019435.01.T01:CDS
GATTTGTTTAAACTTTCTTC+TGG 0.272702 4:+20358955 MsG0480019435.01.T01:three_prime_UTR
CTGCTGGATCTGAGTTTATT+GGG 0.278196 4:+20355872 MsG0480019435.01.T01:CDS
TGAAGCTCGGACAGTGGTTT+TGG 0.303565 4:+20355073 MsG0480019435.01.T01:CDS
TTTCCCAATAATACTATTAC+CGG 0.320204 4:-20355126 None:intergenic
GAAGTTATGTTGAAGATGAT+TGG 0.342560 4:+20355003 MsG0480019435.01.T01:CDS
AGTTGAAGGTGTCAACTAAA+AGG 0.357458 4:+20358736 MsG0480019435.01.T01:CDS
TAATAGTATTATTGGGAAAC+AGG 0.362344 4:+20355130 MsG0480019435.01.T01:CDS
CTTGGGGTTATCGTGTTGCT+TGG 0.393413 4:+20354213 None:intergenic
GTAGATTGAGTCAAAGTTGA+AGG 0.399631 4:+20358722 MsG0480019435.01.T01:intron
TCAGTGATTGGAATTTATGA+TGG 0.402832 4:+20354977 MsG0480019435.01.T01:exon
AAGTTATGTTGAAGATGATT+GGG 0.420774 4:+20355004 MsG0480019435.01.T01:CDS
ACATTCACCGCCTAAATAAT+CGG 0.431303 4:-20356097 None:intergenic
CTCCGCAAGCGAGGTGGTAA+TGG 0.433495 4:+20358888 MsG0480019435.01.T01:CDS
CAACCGGTAATAGTATTATT+GGG 0.436442 4:+20355123 MsG0480019435.01.T01:CDS
TTGGTTGGCCGTACAGGCAA+TGG 0.440299 4:+20355092 MsG0480019435.01.T01:CDS
GGATTATTTGAAGTTTCTGC+TGG 0.441692 4:+20355856 MsG0480019435.01.T01:intron
AGGTCGAGGGCTAGCTCGTC+CGG 0.446801 4:+20355158 MsG0480019435.01.T01:CDS
TTGGGGTTATCGTGTTGCTT+GGG 0.449622 4:+20354214 None:intergenic
CTATATGATCGTGGTCTTCA+CGG 0.451497 4:+20356038 MsG0480019435.01.T01:CDS
ATGAACATCATTAGCTGATC+CGG 0.459032 4:-20355039 None:intergenic
GATTGGGAGTTAGCGTCGTC+CGG 0.459743 4:+20355020 MsG0480019435.01.T01:CDS
GTGGTCTTCACGGGAGGGGA+TGG 0.461079 4:+20356048 MsG0480019435.01.T01:CDS
AGCAGAAGACAATGCAAAGT+TGG 0.468961 4:+20358800 MsG0480019435.01.T01:CDS
CAGTGATTGGAATTTATGAT+GGG 0.469087 4:+20354978 MsG0480019435.01.T01:exon
TGCATTGACTTTGCCAAGGA+TGG 0.487528 4:+20355910 MsG0480019435.01.T01:CDS
GGCAATGGGAAAAGTGCAAC+CGG 0.488294 4:+20355107 MsG0480019435.01.T01:CDS
TGGTTGGCCGTACAGGCAAT+GGG 0.494616 4:+20355093 MsG0480019435.01.T01:CDS
TGAATGTCCAGAGTCTTTGA+AGG 0.507892 4:+20356113 MsG0480019435.01.T01:CDS
ATCCACATTGTACATAGTAA+AGG 0.508516 4:-20359042 None:intergenic
GTCAATGTTATTGACACTCC+AGG 0.521632 4:+20355233 MsG0480019435.01.T01:CDS
TATATGATCGTGGTCTTCAC+GGG 0.533417 4:+20356039 MsG0480019435.01.T01:CDS
GGGGATGGACTAGAAGATGA+TGG 0.534525 4:+20356063 MsG0480019435.01.T01:CDS
GAAGGTGTCAACTAAAAGGC+TGG 0.535970 4:+20358740 MsG0480019435.01.T01:CDS
TGGTGTTATCTGTCAGATCA+CGG 0.542518 4:+20355950 MsG0480019435.01.T01:CDS
GTGATTGGAATTTATGATGG+GGG 0.545427 4:+20354980 MsG0480019435.01.T01:exon
GATCGTGGTCTTCACGGGAG+GGG 0.549312 4:+20356044 MsG0480019435.01.T01:CDS
GATGGCATGGATACCATCCT+TGG 0.552483 4:-20355923 None:intergenic
AACCATTACCACCTCGCTTG+CGG 0.557199 4:-20358890 None:intergenic
ATATTTCAGCTAATGAAGCT+CGG 0.568952 4:+20355060 MsG0480019435.01.T01:CDS
AGCAGCATGCATTTCACAAG+AGG 0.571620 4:-20355189 None:intergenic
TGATTGGAATTTATGATGGG+GGG 0.573203 4:+20354981 MsG0480019435.01.T01:exon
AGCTAATGAAGCTCGGACAG+TGG 0.575504 4:+20355067 MsG0480019435.01.T01:CDS
GACAGATAACACCACAAGGA+TGG 0.579932 4:-20355941 None:intergenic
ACAATGAAATACGAAAACTA+AGG 0.582337 4:+20358838 MsG0480019435.01.T01:CDS
CATGAAGAACTCCGCAAGCG+AGG 0.587165 4:+20358879 MsG0480019435.01.T01:CDS
TGATCGTGGTCTTCACGGGA+GGG 0.592418 4:+20356043 MsG0480019435.01.T01:CDS
ATAACACCACAAGGATGGCA+TGG 0.596816 4:-20355936 None:intergenic
AGCACTACTAGATCATAGAA+TGG 0.601886 4:-20358916 None:intergenic
ATGATCGTGGTCTTCACGGG+AGG 0.612755 4:+20356042 MsG0480019435.01.T01:CDS
ACACTTGCCGATTATTTAGG+CGG 0.621336 4:+20356090 MsG0480019435.01.T01:CDS
CAAGTGCATTGACTTTGCCA+AGG 0.621929 4:+20355906 MsG0480019435.01.T01:CDS
AAAACTAAGGAAGAATCTTG+AGG 0.621998 4:+20358851 MsG0480019435.01.T01:CDS
CATGCTGCTGAGTTGAGTGA+TGG 0.628624 4:+20355203 MsG0480019435.01.T01:CDS
AGTGATTGGAATTTATGATG+GGG 0.631678 4:+20354979 MsG0480019435.01.T01:exon
TTCACAAGAGGAAGTGACAC+CGG 0.638052 4:-20355177 None:intergenic
TGGTATCCATGCCATCCTTG+TGG 0.652793 4:+20355930 MsG0480019435.01.T01:CDS
GATTGTTGACTATATGATCG+TGG 0.655429 4:+20356029 MsG0480019435.01.T01:CDS
GACCTTTACTATGTACAATG+TGG 0.656121 4:+20359040 MsG0480019435.01.T01:three_prime_UTR
TGTCAGATCACGGTTTAGCG+AGG 0.662423 4:+20355960 MsG0480019435.01.T01:CDS
GAAGAACTCCGCAAGCGAGG+TGG 0.663684 4:+20358882 MsG0480019435.01.T01:CDS
ATCTGACAGATAACACCACA+AGG 0.690950 4:-20355945 None:intergenic
ACTAAGGAAGAATCTTGAGG+AGG 0.695240 4:+20358854 MsG0480019435.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTTAATATTTTT+TGG + Chr4:20357186-20357205 MsG0480019435.01.T01:intron 0.0%
!! ATAGAATAAAAACATAAATA+TGG - Chr4:20356180-20356199 None:intergenic 10.0%
!! TAACAAAATTAATTTACTTT+GGG + Chr4:20358007-20358026 MsG0480019435.01.T01:intron 10.0%
!! TAGAATAAAAACATAAATAT+GGG - Chr4:20356179-20356198 None:intergenic 10.0%
!! TTATTATTACTCTTAATAAA+AGG + Chr4:20356264-20356283 MsG0480019435.01.T01:intron 10.0%
!! TTTAATAAGGAAAATAATTA+TGG + Chr4:20357692-20357711 MsG0480019435.01.T01:intron 10.0%
!!! GATTAGTTTTTTTTTTTTTT+GGG + Chr4:20359095-20359114 MsG0480019435.01.T01:three_prime_UTR 10.0%
!!! GTTTTAGATTTTATAAAAAA+TGG + Chr4:20358373-20358392 MsG0480019435.01.T01:intron 10.0%
!!! TACTTTTCTTTTTTAAATTA+CGG - Chr4:20356599-20356618 None:intergenic 10.0%
!!! TGATTAGTTTTTTTTTTTTT+TGG + Chr4:20359094-20359113 MsG0480019435.01.T01:three_prime_UTR 10.0%
!! AATATTAGGAATTAAGTAAT+GGG + Chr4:20357394-20357413 MsG0480019435.01.T01:intron 15.0%
!! CTAACAAAATTAATTTACTT+TGG + Chr4:20358006-20358025 MsG0480019435.01.T01:intron 15.0%
!! TTAAATATCTCAATTATTAC+CGG + Chr4:20355313-20355332 MsG0480019435.01.T01:intron 15.0%
!!! AAAACATCGTTAATTTTTTA+GGG + Chr4:20355417-20355436 MsG0480019435.01.T01:intron 15.0%
!!! ATTCAATTTTCACATTAATT+AGG - Chr4:20357984-20358003 None:intergenic 15.0%
!!! TAAAACATCGTTAATTTTTT+AGG + Chr4:20355416-20355435 MsG0480019435.01.T01:intron 15.0%
!!! TAATTTTGTTGATCTTTAAT+TGG + Chr4:20356677-20356696 MsG0480019435.01.T01:intron 15.0%
!!! TTATTTTCCTTATTAAAAGT+TGG - Chr4:20357689-20357708 None:intergenic 15.0%
!! AATAAGGAAAATAATTATGG+AGG + Chr4:20357695-20357714 MsG0480019435.01.T01:intron 20.0%
!! ATAAATTGTCAAATCTAGTT+TGG + Chr4:20357886-20357905 MsG0480019435.01.T01:intron 20.0%
!! ATAAGGAAAATAATTATGGA+GGG + Chr4:20357696-20357715 MsG0480019435.01.T01:intron 20.0%
!! CAATATTAGGAATTAAGTAA+TGG + Chr4:20357393-20357412 MsG0480019435.01.T01:intron 20.0%
!! GTTCAAATATAATCTATTCT+TGG - Chr4:20358234-20358253 None:intergenic 20.0%
!! TATATTACTTCAAAAACACT+TGG - Chr4:20356546-20356565 None:intergenic 20.0%
!! TATGCTAATATATGTGAAAA+AGG - Chr4:20358499-20358518 None:intergenic 20.0%
!! TGAAATTTCCTTATAGTTTA+GGG + Chr4:20354903-20354922 MsG0480019435.01.T01:intron 20.0%
!! TTGAAAAATATAGACACAAA+AGG - Chr4:20357109-20357128 None:intergenic 20.0%
!! TTGAAATTTCCTTATAGTTT+AGG + Chr4:20354902-20354921 MsG0480019435.01.T01:intron 20.0%
!! TTGTTGTAAAGTTATAGTTA+TGG - Chr4:20354621-20354640 None:intergenic 20.0%
!!! AATTTTCACATTAATTAGGA+TGG - Chr4:20357980-20357999 None:intergenic 20.0%
!!! ATATTCTTTTTCCATTTCAT+GGG + Chr4:20357422-20357441 MsG0480019435.01.T01:intron 20.0%
!!! ATTAACGATGTTTTATTTCT+AGG - Chr4:20355411-20355430 None:intergenic 20.0%
!!! TAGATTTTATAAAAAATGGG+AGG + Chr4:20358377-20358396 MsG0480019435.01.T01:intron 20.0%
!!! TATAAAAGTTTGTTGTTGTA+AGG - Chr4:20354555-20354574 None:intergenic 20.0%
!!! TATATTCTTTTTCCATTTCA+TGG + Chr4:20357421-20357440 MsG0480019435.01.T01:intron 20.0%
!!! TGGTTAAGTTTGTTATTTTT+TGG + Chr4:20354838-20354857 MsG0480019435.01.T01:intron 20.0%
!!! TTAACGATGTTTTATTTCTA+GGG - Chr4:20355410-20355429 None:intergenic 20.0%
!!! TTTGGTATTTTAAAAAGTTG+TGG + Chr4:20357493-20357512 MsG0480019435.01.T01:intron 20.0%
! AAGTTATGTTGAAGATGATT+GGG + Chr4:20355004-20355023 MsG0480019435.01.T01:CDS 25.0%
! ACAATGAAATACGAAAACTA+AGG + Chr4:20358838-20358857 MsG0480019435.01.T01:CDS 25.0%
! AGTTAAACAGAATCGATATA+GGG - Chr4:20354472-20354491 None:intergenic 25.0%
! ATCTCCTTTGTATATGTAAA+GGG - Chr4:20355593-20355612 None:intergenic 25.0%
! ATGCTGAGAATAAAAATCAT+CGG - Chr4:20355673-20355692 None:intergenic 25.0%
! ATGTCAACGCAATAAAAATA+AGG - Chr4:20359009-20359028 None:intergenic 25.0%
! ATGTCTATTACAAATTCACA+AGG - Chr4:20357463-20357482 None:intergenic 25.0%
! CAAAATCAAACATTGTAAGA+GGG - Chr4:20358423-20358442 None:intergenic 25.0%
! CAATTTCTACAAAGTAGAAT+GGG + Chr4:20358286-20358305 MsG0480019435.01.T01:intron 25.0%
! TAACTCATATTACAAACTCA+TGG - Chr4:20358137-20358156 None:intergenic 25.0%
! TAATAGTATTATTGGGAAAC+AGG + Chr4:20355130-20355149 MsG0480019435.01.T01:CDS 25.0%
! TAGTTAAACAGAATCGATAT+AGG - Chr4:20354473-20354492 None:intergenic 25.0%
! TAGTTATTTGCAGTTTCTAT+AGG + Chr4:20357756-20357775 MsG0480019435.01.T01:intron 25.0%
! TATGTGTTCGATCAATTATA+TGG + Chr4:20358695-20358714 MsG0480019435.01.T01:intron 25.0%
! TTAGGATTTCAAAAAGCTTA+CGG + Chr4:20357546-20357565 MsG0480019435.01.T01:intron 25.0%
! TTTCATGTTTCTTACAAGAT+TGG + Chr4:20355616-20355635 MsG0480019435.01.T01:intron 25.0%
! TTTCCCAATAATACTATTAC+CGG - Chr4:20355129-20355148 None:intergenic 25.0%
!! ATAATCCTGTAAAACTTTTC+AGG - Chr4:20355843-20355862 None:intergenic 25.0%
!! CAATCTTGTTTCTTAAATCT+TGG + Chr4:20356904-20356923 MsG0480019435.01.T01:intron 25.0%
!! GATTTGTTTAAACTTTCTTC+TGG + Chr4:20358955-20358974 MsG0480019435.01.T01:three_prime_UTR 25.0%
!! GCTTGAATATCTAGAATTAT+AGG + Chr4:20356398-20356417 MsG0480019435.01.T01:intron 25.0%
!! TTTAACCTGAAAAGTTTTAC+AGG + Chr4:20355835-20355854 MsG0480019435.01.T01:intron 25.0%
!!! AAGTATTGAAATGTGCATTA+GGG + Chr4:20358067-20358086 MsG0480019435.01.T01:intron 25.0%
!!! AGTCTTCTTACACATTTTTT+TGG + Chr4:20356349-20356368 MsG0480019435.01.T01:intron 25.0%
!!! GCTTTTGATTCAACATATTT+TGG + Chr4:20354818-20354837 MsG0480019435.01.T01:intron 25.0%
!!! TGTTTCCATTTTTGTTTGTA+CGG + Chr4:20357662-20357681 MsG0480019435.01.T01:intron 25.0%
!!! TTGAATTTGTTTTCAGTGAT+TGG + Chr4:20354965-20354984 MsG0480019435.01.T01:intron 25.0%
!!! TTTTTCTTTAAGGGTGTTTT+TGG - Chr4:20356653-20356672 None:intergenic 25.0%
AAAACTAAGGAAGAATCTTG+AGG + Chr4:20358851-20358870 MsG0480019435.01.T01:CDS 30.0%
AAGACCCTTTACATATACAA+AGG + Chr4:20355586-20355605 MsG0480019435.01.T01:intron 30.0%
AGTGATTGGAATTTATGATG+GGG + Chr4:20354979-20354998 MsG0480019435.01.T01:exon 30.0%
ATAAAAACCTTCAAAGACTC+TGG - Chr4:20356123-20356142 None:intergenic 30.0%
ATATTTCAGCTAATGAAGCT+CGG + Chr4:20355060-20355079 MsG0480019435.01.T01:CDS 30.0%
ATCCACATTGTACATAGTAA+AGG - Chr4:20359045-20359064 None:intergenic 30.0%
ATCGAACACATAAATACTAG+GGG - Chr4:20358687-20358706 None:intergenic 30.0%
ATGTCTCATAATCTACGTAA+CGG + Chr4:20354420-20354439 MsG0480019435.01.T01:intron 30.0%
ATTAGTTGAGTTTAAACCGA+GGG + Chr4:20355528-20355547 MsG0480019435.01.T01:intron 30.0%
CAACCGGTAATAGTATTATT+GGG + Chr4:20355123-20355142 MsG0480019435.01.T01:CDS 30.0%
CAAGTAGATCTTGATCAAAT+GGG + Chr4:20357856-20357875 MsG0480019435.01.T01:intron 30.0%
CAGTGATTGGAATTTATGAT+GGG + Chr4:20354978-20354997 MsG0480019435.01.T01:exon 30.0%
CATAACTCAAACAAAACCAT+AGG - Chr4:20355753-20355772 None:intergenic 30.0%
CATCTCCTTTGTATATGTAA+AGG - Chr4:20355594-20355613 None:intergenic 30.0%
CATCTTGATCATAAAGATCA+AGG + Chr4:20357914-20357933 MsG0480019435.01.T01:intron 30.0%
CCAAAATCAAACATTGTAAG+AGG - Chr4:20358424-20358443 None:intergenic 30.0%
CTTAAAGCTCGTTCAATATT+AGG + Chr4:20357380-20357399 MsG0480019435.01.T01:intron 30.0%
GAAGTGTAAAAGATTGTGTA+AGG - Chr4:20354353-20354372 None:intergenic 30.0%
GAAGTTATGTTGAAGATGAT+TGG + Chr4:20355003-20355022 MsG0480019435.01.T01:CDS 30.0%
GATCGAACACATAAATACTA+GGG - Chr4:20358688-20358707 None:intergenic 30.0%
GCAAATAACTCATGTGTATA+GGG - Chr4:20356852-20356871 None:intergenic 30.0%
GCAATTTCTACAAAGTAGAA+TGG + Chr4:20358285-20358304 MsG0480019435.01.T01:intron 30.0%
GCTAAAACATATTACTGAGA+CGG + Chr4:20357081-20357100 MsG0480019435.01.T01:intron 30.0%
GTATATGTAAAGGGTCTTTA+AGG - Chr4:20355584-20355603 None:intergenic 30.0%
TATATACATGCATTTCTGCA+TGG + Chr4:20357225-20357244 MsG0480019435.01.T01:intron 30.0%
TATGAGTTATGAAAACTGCA+AGG + Chr4:20358148-20358167 MsG0480019435.01.T01:intron 30.0%
TATTACAAACTCATGGAATC+AGG - Chr4:20358130-20358149 None:intergenic 30.0%
TCAGTGATTGGAATTTATGA+TGG + Chr4:20354977-20354996 MsG0480019435.01.T01:exon 30.0%
TCTGTCATGTGAATATTTAG+AGG - Chr4:20358628-20358647 None:intergenic 30.0%
TGAAAAAGGAAACTGTTTGT+TGG - Chr4:20358485-20358504 None:intergenic 30.0%
TGAGTTATTTGCAGAACTAA+AGG + Chr4:20356860-20356879 MsG0480019435.01.T01:intron 30.0%
TGATCGAACACATAAATACT+AGG - Chr4:20358689-20358708 None:intergenic 30.0%
TGCAAATAACTCATGTGTAT+AGG - Chr4:20356853-20356872 None:intergenic 30.0%
TGTTAGTTACAGTGAAAAAG+AGG - Chr4:20354531-20354550 None:intergenic 30.0%
TTTATTTGTGACCTGCTTTA+GGG + Chr4:20354500-20354519 MsG0480019435.01.T01:intron 30.0%
! CCTTTTGATCATTGTAATAC+CGG + Chr4:20354644-20354663 MsG0480019435.01.T01:intron 30.0%
! TATTCTCAGCATGAAGTTTT+TGG + Chr4:20355681-20355700 MsG0480019435.01.T01:intron 30.0%
! TGCATATATTGATTGCAGAA+AGG + Chr4:20356950-20356969 MsG0480019435.01.T01:intron 30.0%
! TTATTGGGAAACAGGTTTTT+AGG + Chr4:20355138-20355157 MsG0480019435.01.T01:CDS 30.0%
! TTTGGATTGAGGATTTTAGA+AGG - Chr4:20356635-20356654 None:intergenic 30.0%
!! AGATCTACTTGCATTTTGAT+CGG - Chr4:20357847-20357866 None:intergenic 30.0%
!! CAAACTTTTCAAGAAGTAGA+AGG - Chr4:20355809-20355828 None:intergenic 30.0%
!! CCTCTTACAATGTTTGATTT+TGG + Chr4:20358421-20358440 MsG0480019435.01.T01:intron 30.0%
!! GAAGTATTGAAATGTGCATT+AGG + Chr4:20358066-20358085 MsG0480019435.01.T01:intron 30.0%
!! TAATTTACTTTGGGTTGAGA+TGG + Chr4:20358016-20358035 MsG0480019435.01.T01:intron 30.0%
!! TTACATGTGTTGTGTTGATT+TGG - Chr4:20354719-20354738 None:intergenic 30.0%
!! TTGGATTGAGGATTTTAGAA+GGG - Chr4:20356634-20356653 None:intergenic 30.0%
!! TTTTATTTGTGACCTGCTTT+AGG + Chr4:20354499-20354518 MsG0480019435.01.T01:intron 30.0%
!!! TTGCATCGATTCTGTTTTTA+GGG + Chr4:20354578-20354597 MsG0480019435.01.T01:intron 30.0%
ACATTCACCGCCTAAATAAT+CGG - Chr4:20356100-20356119 None:intergenic 35.0%
ACTTCACACCATACCATAAA+TGG - Chr4:20358051-20358070 None:intergenic 35.0%
AGCACTACTAGATCATAGAA+TGG - Chr4:20358919-20358938 None:intergenic 35.0%
AGTTATGAAAACTGCAAGGA+TGG + Chr4:20358152-20358171 MsG0480019435.01.T01:intron 35.0%
ATAGACATTAAGCGTGTGTT+TGG + Chr4:20357475-20357494 MsG0480019435.01.T01:intron 35.0%
ATGAACATCATTAGCTGATC+CGG - Chr4:20355042-20355061 None:intergenic 35.0%
CACATTAATTAGGATGGAGT+TGG - Chr4:20357974-20357993 None:intergenic 35.0%
CCGGTATTACAATGATCAAA+AGG - Chr4:20354647-20354666 None:intergenic 35.0%
CTAAAAACAGAATCGATGCA+AGG - Chr4:20354579-20354598 None:intergenic 35.0%
CTAGTGATTCGTATCACTAA+AGG - Chr4:20356327-20356346 None:intergenic 35.0%
CTTCACACCATACCATAAAT+GGG - Chr4:20358050-20358069 None:intergenic 35.0%
GACCTTTACTATGTACAATG+TGG + Chr4:20359040-20359059 MsG0480019435.01.T01:three_prime_UTR 35.0%
GCAACCGGTAATAGTATTAT+TGG + Chr4:20355122-20355141 MsG0480019435.01.T01:CDS 35.0%
GCAAGTAGATCTTGATCAAA+TGG + Chr4:20357855-20357874 MsG0480019435.01.T01:intron 35.0%
GGGTAGAATAAGGAAAATTG+AGG + Chr4:20358173-20358192 MsG0480019435.01.T01:intron 35.0%
GTAGATTGAGTCAAAGTTGA+AGG + Chr4:20358722-20358741 MsG0480019435.01.T01:intron 35.0%
GTGATTGGAATTTATGATGG+GGG + Chr4:20354980-20354999 MsG0480019435.01.T01:exon 35.0%
GTTATGAAAACTGCAAGGAT+GGG + Chr4:20358153-20358172 MsG0480019435.01.T01:intron 35.0%
GTTATTTGCAGAACTAAAGG+TGG + Chr4:20356863-20356882 MsG0480019435.01.T01:intron 35.0%
TCAAAAAGCTTACGGTGAAA+GGG + Chr4:20357554-20357573 MsG0480019435.01.T01:intron 35.0%
TCAAGGTGTGTTTAGATTGA+GGG + Chr4:20356441-20356460 MsG0480019435.01.T01:intron 35.0%
TCAATCTAAACACACCTTGA+AGG - Chr4:20356441-20356460 None:intergenic 35.0%
TCAATGCTGTTAGCTATTAC+TGG + Chr4:20357322-20357341 MsG0480019435.01.T01:intron 35.0%
TGAGAGGAAAAAAGAACTTG+TGG + Chr4:20358447-20358466 MsG0480019435.01.T01:intron 35.0%
TGATAGTATCACAGAATGGT+GGG + Chr4:20356823-20356842 MsG0480019435.01.T01:intron 35.0%
TGATTCGTATCACTAAAGGA+GGG - Chr4:20356323-20356342 None:intergenic 35.0%
TGTGATGACCCTAAACTATA+AGG - Chr4:20354914-20354933 None:intergenic 35.0%
TGTGTTTAGATTGAGGGTTT+AGG + Chr4:20356447-20356466 MsG0480019435.01.T01:intron 35.0%
TTACAAATTCACAAGGCCAT+TGG - Chr4:20357456-20357475 None:intergenic 35.0%
TTATAGGAAAGTCTATCTGC+TGG + Chr4:20356414-20356433 MsG0480019435.01.T01:intron 35.0%
TTCAAAAAGCTTACGGTGAA+AGG + Chr4:20357553-20357572 MsG0480019435.01.T01:intron 35.0%
TTCAAGGTGTGTTTAGATTG+AGG + Chr4:20356440-20356459 MsG0480019435.01.T01:intron 35.0%
TTGGTCCGTACAAACAAAAA+TGG - Chr4:20357670-20357689 None:intergenic 35.0%
TTTAGATTGAGGGTTTAGGA+GGG + Chr4:20356451-20356470 MsG0480019435.01.T01:intron 35.0%
! AGAAAGATTGATTCCTTGGA+AGG + Chr4:20356998-20357017 MsG0480019435.01.T01:intron 35.0%
! AGCTTGATAGTATCACAGAA+TGG + Chr4:20356819-20356838 MsG0480019435.01.T01:intron 35.0%
! CAGCATTGAATGCAACTAAT+TGG - Chr4:20357311-20357330 None:intergenic 35.0%
! GATACACTTGCCGATTATTT+AGG + Chr4:20356087-20356106 MsG0480019435.01.T01:CDS 35.0%
! GATTAGTTGAGTTTAAACCG+AGG + Chr4:20355527-20355546 MsG0480019435.01.T01:intron 35.0%
! GATTGTTGACTATATGATCG+TGG + Chr4:20356029-20356048 MsG0480019435.01.T01:CDS 35.0%
! GCAAAGAAAGATTGATTCCT+TGG + Chr4:20356994-20357013 MsG0480019435.01.T01:intron 35.0%
! GGATTATTTGAAGTTTCTGC+TGG + Chr4:20355856-20355875 MsG0480019435.01.T01:intron 35.0%
! GTACGGACCAACTTTTAATA+AGG + Chr4:20357679-20357698 MsG0480019435.01.T01:intron 35.0%
! TGATTGGAATTTATGATGGG+GGG + Chr4:20354981-20355000 MsG0480019435.01.T01:exon 35.0%
! TTCTTTTGAATGTCCTTCCA+AGG - Chr4:20357014-20357033 None:intergenic 35.0%
! TTGATAGTATCACAGAATGG+TGG + Chr4:20356822-20356841 MsG0480019435.01.T01:intron 35.0%
! TTTGGTATTCGTGTTTCTGT+TGG + Chr4:20355349-20355368 MsG0480019435.01.T01:intron 35.0%
! TTTTCCATTTCATGGGTCAT+AGG + Chr4:20357429-20357448 MsG0480019435.01.T01:intron 35.0%
!! AGTTGAAGGTGTCAACTAAA+AGG + Chr4:20358736-20358755 MsG0480019435.01.T01:CDS 35.0%
!! ATTAAGCACCGATATAGACA+TGG - Chr4:20354797-20354816 None:intergenic 35.0%
!! GTGTTGTGTTGATTTGGTAT+CGG - Chr4:20354713-20354732 None:intergenic 35.0%
!! TGGATTGAGGATTTTAGAAG+GGG - Chr4:20356633-20356652 None:intergenic 35.0%
!! TGTTTCTGTTGGTGATTTGT+AGG + Chr4:20355360-20355379 MsG0480019435.01.T01:intron 35.0%
!! TGTTTGATTTTGGACTTGAG+AGG + Chr4:20358431-20358450 MsG0480019435.01.T01:intron 35.0%
!!! CTTGCATCGATTCTGTTTTT+AGG + Chr4:20354577-20354596 MsG0480019435.01.T01:intron 35.0%
!!! GTTTTGACTTGATGTCACTT+AGG + Chr4:20357346-20357365 MsG0480019435.01.T01:intron 35.0%
!!! TTAAGGGTGTTTTTGGATTG+AGG - Chr4:20356646-20356665 None:intergenic 35.0%
AAGAGGACCCATTTATGGTA+TGG + Chr4:20358040-20358059 MsG0480019435.01.T01:intron 40.0%
AAGAGGATAAACCCTAAAGC+AGG - Chr4:20354514-20354533 None:intergenic 40.0%
ACCAAAAACAACACAGACAC+CGG - Chr4:20355335-20355354 None:intergenic 40.0%
ACTAAGGAAGAATCTTGAGG+AGG + Chr4:20358854-20358873 MsG0480019435.01.T01:CDS 40.0%
AGCAGAAGACAATGCAAAGT+TGG + Chr4:20358800-20358819 MsG0480019435.01.T01:CDS 40.0%
AGGTAAATACACGCCTACAT+AGG + Chr4:20355253-20355272 MsG0480019435.01.T01:intron 40.0%
ATCTGACAGATAACACCACA+AGG - Chr4:20355948-20355967 None:intergenic 40.0%
ATGGTAAGAGGACCCATTTA+TGG + Chr4:20358035-20358054 MsG0480019435.01.T01:intron 40.0%
ATTTGCAGAACTAAAGGTGG+AGG + Chr4:20356866-20356885 MsG0480019435.01.T01:intron 40.0%
CAAAAAGCTTACGGTGAAAG+GGG + Chr4:20357555-20357574 MsG0480019435.01.T01:intron 40.0%
CAAGGTAGTGATGTTCTATC+GGG + Chr4:20357587-20357606 MsG0480019435.01.T01:intron 40.0%
CATCCTACAAAACACAGACA+CGG - Chr4:20355486-20355505 None:intergenic 40.0%
CCTGAAACAAGTAACACCTA+TGG + Chr4:20355734-20355753 MsG0480019435.01.T01:intron 40.0%
CTATATGATCGTGGTCTTCA+CGG + Chr4:20356038-20356057 MsG0480019435.01.T01:CDS 40.0%
CTGCTGGATCTGAGTTTATT+GGG + Chr4:20355872-20355891 MsG0480019435.01.T01:CDS 40.0%
GAAGCACGTGTCTATTTAGT+GGG - Chr4:20357623-20357642 None:intergenic 40.0%
GAGAGAGTTGAAGAGTTGAA+GGG - Chr4:20354326-20354345 None:intergenic 40.0%
GCAAGGTAGTGATGTTCTAT+CGG + Chr4:20357586-20357605 MsG0480019435.01.T01:intron 40.0%
GTCAATGTTATTGACACTCC+AGG + Chr4:20355233-20355252 MsG0480019435.01.T01:CDS 40.0%
GTGATTCGTATCACTAAAGG+AGG - Chr4:20356324-20356343 None:intergenic 40.0%
GTGTGTGTCCATGTCTATAT+CGG + Chr4:20354786-20354805 MsG0480019435.01.T01:intron 40.0%
GTTGTTCTATGCTTGAACTC+TGG + Chr4:20358594-20358613 MsG0480019435.01.T01:intron 40.0%
GTTTAGATTGAGGGTTTAGG+AGG + Chr4:20356450-20356469 MsG0480019435.01.T01:intron 40.0%
TATATGATCGTGGTCTTCAC+GGG + Chr4:20356039-20356058 MsG0480019435.01.T01:CDS 40.0%
TATGTAGGCGTGTATTTACC+TGG - Chr4:20355254-20355273 None:intergenic 40.0%
TCTCTTTGACAACAAGACCA+AGG + Chr4:20356749-20356768 MsG0480019435.01.T01:intron 40.0%
TCTGCTGGATCTGAGTTTAT+TGG + Chr4:20355871-20355890 MsG0480019435.01.T01:CDS 40.0%
TGAATGTCCAGAGTCTTTGA+AGG + Chr4:20356113-20356132 MsG0480019435.01.T01:CDS 40.0%
TGAGAGAGTTGAAGAGTTGA+AGG - Chr4:20354327-20354346 None:intergenic 40.0%
TGAGTGTCAATAGCCTATGT+AGG - Chr4:20355269-20355288 None:intergenic 40.0%
TGCATTAGGGATCAAAATGC+AGG + Chr4:20358080-20358099 MsG0480019435.01.T01:intron 40.0%
TGCGAAATGAGAGAGTTGAA+GGG - Chr4:20354295-20354314 None:intergenic 40.0%
TTACTGTGCGTACTTTGCTT+CGG + Chr4:20354265-20354284 MsG0480019435.01.T01:intron 40.0%
TTAGATTGAGGGTTTAGGAG+GGG + Chr4:20356452-20356471 MsG0480019435.01.T01:intron 40.0%
TTGATTGCAGAAAGGAGCAA+TGG + Chr4:20356958-20356977 MsG0480019435.01.T01:intron 40.0%
TTGCAGTTTCTATAGGAGTC+AGG + Chr4:20357763-20357782 MsG0480019435.01.T01:intron 40.0%
TTGGTAGGGGAAATTGTACT+GGG + Chr4:20357798-20357817 MsG0480019435.01.T01:intron 40.0%
! ACACTTGCCGATTATTTAGG+CGG + Chr4:20356090-20356109 MsG0480019435.01.T01:CDS 40.0%
! GTGTCTATTTAGTGGGTGTT+TGG - Chr4:20357616-20357635 None:intergenic 40.0%
! TAAGCACCCCATTTCGTTTT+TGG + Chr4:20355451-20355470 MsG0480019435.01.T01:intron 40.0%
! TAGACACGTGCTTCCATTTT+TGG + Chr4:20357629-20357648 MsG0480019435.01.T01:intron 40.0%
! TCTATAGGAGTCAGGACTTT+TGG + Chr4:20357771-20357790 MsG0480019435.01.T01:intron 40.0%
!! AGACACGTGCTTCCATTTTT+GGG + Chr4:20357630-20357649 MsG0480019435.01.T01:intron 40.0%
!! ATTGAGGATTTTAGAAGGGG+AGG - Chr4:20356630-20356649 None:intergenic 40.0%
!! CCATAGGTGTTACTTGTTTC+AGG - Chr4:20355737-20355756 None:intergenic 40.0%
!! TATGGAGGGTATCTTTCACA+AGG + Chr4:20357710-20357729 MsG0480019435.01.T01:intron 40.0%
!! TGGTGTTATCTGTCAGATCA+CGG + Chr4:20355950-20355969 MsG0480019435.01.T01:CDS 40.0%
!! TTGAGGATTTTAGAAGGGGA+GGG - Chr4:20356629-20356648 None:intergenic 40.0%
!! TTGGGTTGAAGCTAACACTT+AGG + Chr4:20357528-20357547 MsG0480019435.01.T01:intron 40.0%
!!! GAAACAGGTTTTTAGGTCGA+GGG + Chr4:20355145-20355164 MsG0480019435.01.T01:CDS 40.0%
AACGATTCGCACACAAAGAC+AGG - Chr4:20356725-20356744 None:intergenic 45.0%
AAGGACGAAAAGAAGCGATC+TGG + Chr4:20356768-20356787 MsG0480019435.01.T01:intron 45.0%
ACAAAACACAGACACGGACA+CGG - Chr4:20355480-20355499 None:intergenic 45.0%
ACAGTACACGTGCCCAAAAA+TGG - Chr4:20357645-20357664 None:intergenic 45.0%
ACGGACGCCAAAAACGAAAT+GGG - Chr4:20355461-20355480 None:intergenic 45.0%
AGCAGCATGCATTTCACAAG+AGG - Chr4:20355192-20355211 None:intergenic 45.0%
ATAACACCACAAGGATGGCA+TGG - Chr4:20355939-20355958 None:intergenic 45.0%
CGCAGCTTGCAGACATTATT+TGG + Chr4:20356000-20356019 MsG0480019435.01.T01:CDS 45.0%
CTGAAGTTCCGACTCTTGTT+AGG + Chr4:20358196-20358215 MsG0480019435.01.T01:intron 45.0%
CTGCAAGGATGGGTAGAATA+AGG + Chr4:20358163-20358182 MsG0480019435.01.T01:intron 45.0%
CTGCGAAATGAGAGAGTTGA+AGG - Chr4:20354296-20354315 None:intergenic 45.0%
CTTCAACTCTCTCATTTCGC+AGG + Chr4:20354294-20354313 MsG0480019435.01.T01:intron 45.0%
CTTGGTAGGGGAAATTGTAC+TGG + Chr4:20357797-20357816 MsG0480019435.01.T01:intron 45.0%
GACAGATAACACCACAAGGA+TGG - Chr4:20355944-20355963 None:intergenic 45.0%
GCATATGCAGCAAACATACG+AGG + Chr4:20357054-20357073 MsG0480019435.01.T01:intron 45.0%
GCTCATGATAAGTTGTCCCT+CGG - Chr4:20355547-20355566 None:intergenic 45.0%
TAGGGGAAATTGTACTGGGA+AGG + Chr4:20357802-20357821 MsG0480019435.01.T01:intron 45.0%
TCAAACACAGTGACACCACA+CGG - Chr4:20354683-20354702 None:intergenic 45.0%
TGGACCTATGACCCATGAAA+TGG - Chr4:20357436-20357455 None:intergenic 45.0%
TTCACAAGAGGAAGTGACAC+CGG - Chr4:20355180-20355199 None:intergenic 45.0%
TTCATGGGTCATAGGTCCAA+TGG + Chr4:20357437-20357456 MsG0480019435.01.T01:intron 45.0%
! AGATCGCTTCTTTTCGTCCT+TGG - Chr4:20356769-20356788 None:intergenic 45.0%
! CACTTTTCCCATTGCCTGTA+CGG - Chr4:20355103-20355122 None:intergenic 45.0%
! GGAAGCACGTGTCTATTTAG+TGG - Chr4:20357624-20357643 None:intergenic 45.0%
! GGGTCTTTAAGGAATGCGAA+TGG - Chr4:20355573-20355592 None:intergenic 45.0%
! TGTCCGTGTCTGTGTTTTGT+AGG + Chr4:20355480-20355499 MsG0480019435.01.T01:intron 45.0%
!! AGGACTTTTGGTAGCTTGGT+AGG + Chr4:20357783-20357802 MsG0480019435.01.T01:intron 45.0%
!! AGTCAGGACTTTTGGTAGCT+TGG + Chr4:20357779-20357798 MsG0480019435.01.T01:intron 45.0%
!! CAAGTGCATTGACTTTGCCA+AGG + Chr4:20355906-20355925 MsG0480019435.01.T01:CDS 45.0%
!! CTTTGGGTTGAGATGGTAAG+AGG + Chr4:20358023-20358042 MsG0480019435.01.T01:intron 45.0%
!! GAAGGTGTCAACTAAAAGGC+TGG + Chr4:20358740-20358759 MsG0480019435.01.T01:CDS 45.0%
!! GACTTTTGGTAGCTTGGTAG+GGG + Chr4:20357785-20357804 MsG0480019435.01.T01:intron 45.0%
!! GGACTTTTGGTAGCTTGGTA+GGG + Chr4:20357784-20357803 MsG0480019435.01.T01:intron 45.0%
!! TGAGGATTTTAGAAGGGGAG+GGG - Chr4:20356628-20356647 None:intergenic 45.0%
!! TGCATTGACTTTGCCAAGGA+TGG + Chr4:20355910-20355929 MsG0480019435.01.T01:CDS 45.0%
!!! ACCGGTGTCTGTGTTGTTTT+TGG + Chr4:20355331-20355350 MsG0480019435.01.T01:intron 45.0%
!!! GGAAACAGGTTTTTAGGTCG+AGG + Chr4:20355144-20355163 MsG0480019435.01.T01:CDS 45.0%
!!! AAATTATTAATTTTTCTTTA+AGG - Chr4:20356663-20356682 None:intergenic 5.0%
!!! AATTATTAATTTTTCTTTAA+GGG - Chr4:20356662-20356681 None:intergenic 5.0%
!!! TTTTAGATTTTATAAAAAAT+GGG + Chr4:20358374-20358393 MsG0480019435.01.T01:intron 5.0%
AACCATTACCACCTCGCTTG+CGG - Chr4:20358893-20358912 None:intergenic 50.0%
AGCTAATGAAGCTCGGACAG+TGG + Chr4:20355067-20355086 MsG0480019435.01.T01:CDS 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + Chr4:20356456-20356475 MsG0480019435.01.T01:intron 50.0%
CACGGACGCCAAAAACGAAA+TGG - Chr4:20355462-20355481 None:intergenic 50.0%
CGGACGCCAAAAACGAAATG+GGG - Chr4:20355460-20355479 None:intergenic 50.0%
GAGCAATGGAACTGCATAGC+GGG + Chr4:20356972-20356991 MsG0480019435.01.T01:intron 50.0%
GATGGCATGGATACCATCCT+TGG - Chr4:20355926-20355945 None:intergenic 50.0%
GGAGCAATGGAACTGCATAG+CGG + Chr4:20356971-20356990 MsG0480019435.01.T01:intron 50.0%
GTCTATCTGCTGGACCTTCA+AGG + Chr4:20356424-20356443 MsG0480019435.01.T01:intron 50.0%
TGAAAGGGGTCTCAAACGCA+AGG + Chr4:20357569-20357588 MsG0480019435.01.T01:intron 50.0%
TGGTATCCATGCCATCCTTG+TGG + Chr4:20355930-20355949 MsG0480019435.01.T01:CDS 50.0%
TGTCAGATCACGGTTTAGCG+AGG + Chr4:20355960-20355979 MsG0480019435.01.T01:CDS 50.0%
! AGGATGGAGTTGGTTGAGCT+GGG - Chr4:20357964-20357983 None:intergenic 50.0%
! CATGCTGCTGAGTTGAGTGA+TGG + Chr4:20355203-20355222 MsG0480019435.01.T01:CDS 50.0%
! GGCAATGGGAAAAGTGCAAC+CGG + Chr4:20355107-20355126 MsG0480019435.01.T01:CDS 50.0%
! GTTAGCTTCAACCCAACGTG+CGG - Chr4:20357524-20357543 None:intergenic 50.0%
! TAGGATGGAGTTGGTTGAGC+TGG - Chr4:20357965-20357984 None:intergenic 50.0%
! TGAAGCTCGGACAGTGGTTT+TGG + Chr4:20355073-20355092 MsG0480019435.01.T01:CDS 50.0%
!! GATTTTAGAAGGGGAGGGGA+GGG - Chr4:20356624-20356643 None:intergenic 50.0%
!! GGGGATGGACTAGAAGATGA+TGG + Chr4:20356063-20356082 MsG0480019435.01.T01:CDS 50.0%
AGGGTTTAGGAGGGGAAGGA+AGG + Chr4:20356460-20356479 MsG0480019435.01.T01:intron 55.0%
ATGATCGTGGTCTTCACGGG+AGG + Chr4:20356042-20356061 MsG0480019435.01.T01:CDS 55.0%
CATGAAGAACTCCGCAAGCG+AGG + Chr4:20358879-20358898 MsG0480019435.01.T01:CDS 55.0%
GATTGGGAGTTAGCGTCGTC+CGG + Chr4:20355020-20355039 MsG0480019435.01.T01:CDS 55.0%
GGGTTTAGGAGGGGAAGGAA+GGG + Chr4:20356461-20356480 MsG0480019435.01.T01:intron 55.0%
GGTTTAGGAGGGGAAGGAAG+GGG + Chr4:20356462-20356481 MsG0480019435.01.T01:intron 55.0%
TGATCGTGGTCTTCACGGGA+GGG + Chr4:20356043-20356062 MsG0480019435.01.T01:CDS 55.0%
TTGTGGTGTGACCGCACGTT+GGG + Chr4:20357510-20357529 MsG0480019435.01.T01:intron 55.0%
! TGGTTGGCCGTACAGGCAAT+GGG + Chr4:20355093-20355112 MsG0480019435.01.T01:CDS 55.0%
! TTGGTTGGCCGTACAGGCAA+TGG + Chr4:20355092-20355111 MsG0480019435.01.T01:CDS 55.0%
!! GGATTTTAGAAGGGGAGGGG+AGG - Chr4:20356625-20356644 None:intergenic 55.0%
!!! GCTCGGACAGTGGTTTTGGT+TGG + Chr4:20355077-20355096 MsG0480019435.01.T01:CDS 55.0%
!!! GTGGTTTTGGTTGGCCGTAC+AGG + Chr4:20355086-20355105 MsG0480019435.01.T01:CDS 55.0%
ACACGGCTTCGATCAGAGGC+CGG - Chr4:20354666-20354685 None:intergenic 60.0%
CACCACACGGCTTCGATCAG+AGG - Chr4:20354670-20354689 None:intergenic 60.0%
CTCCGCAAGCGAGGTGGTAA+TGG + Chr4:20358888-20358907 MsG0480019435.01.T01:CDS 60.0%
GAAGAACTCCGCAAGCGAGG+TGG + Chr4:20358882-20358901 MsG0480019435.01.T01:CDS 60.0%
GATCGTGGTCTTCACGGGAG+GGG + Chr4:20356044-20356063 MsG0480019435.01.T01:CDS 60.0%
GTTGTGGTGTGACCGCACGT+TGG + Chr4:20357509-20357528 MsG0480019435.01.T01:intron 60.0%
TAGGAGGGGAAGGAAGGGGA+GGG + Chr4:20356466-20356485 MsG0480019435.01.T01:intron 60.0%
TTAGGAGGGGAAGGAAGGGG+AGG + Chr4:20356465-20356484 MsG0480019435.01.T01:intron 60.0%
GGCCTCTGATCGAAGCCGTG+TGG + Chr4:20354665-20354684 MsG0480019435.01.T01:intron 65.0%
GTGGTCTTCACGGGAGGGGA+TGG + Chr4:20356048-20356067 MsG0480019435.01.T01:CDS 65.0%
!! AGGTCGAGGGCTAGCTCGTC+CGG + Chr4:20355158-20355177 MsG0480019435.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 20354220 20359114 20354220 ID=MsG0480019435.01;Name=MsG0480019435.01
Chr4 mRNA 20354220 20359114 20354220 ID=MsG0480019435.01.T01;Parent=MsG0480019435.01;Name=MsG0480019435.01.T01;_AED=0.20;_eAED=0.20;_QI=77|0.66|1|1|0.66|0.5|4|188|246
Chr4 exon 20354220 20354277 20354220 ID=MsG0480019435.01.T01:exon:9852;Parent=MsG0480019435.01.T01
Chr4 exon 20354974 20355254 20354974 ID=MsG0480019435.01.T01:exon:9853;Parent=MsG0480019435.01.T01
Chr4 exon 20355857 20356134 20355857 ID=MsG0480019435.01.T01:exon:9854;Parent=MsG0480019435.01.T01
Chr4 exon 20358726 20359114 20358726 ID=MsG0480019435.01.T01:exon:9855;Parent=MsG0480019435.01.T01
Chr4 five_prime_UTR 20354220 20354277 20354220 ID=MsG0480019435.01.T01:five_prime_utr;Parent=MsG0480019435.01.T01
Chr4 five_prime_UTR 20354974 20354992 20354974 ID=MsG0480019435.01.T01:five_prime_utr;Parent=MsG0480019435.01.T01
Chr4 CDS 20354993 20355254 20354993 ID=MsG0480019435.01.T01:cds;Parent=MsG0480019435.01.T01
Chr4 CDS 20355857 20356134 20355857 ID=MsG0480019435.01.T01:cds;Parent=MsG0480019435.01.T01
Chr4 CDS 20358726 20358926 20358726 ID=MsG0480019435.01.T01:cds;Parent=MsG0480019435.01.T01
Chr4 three_prime_UTR 20358927 20359114 20358927 ID=MsG0480019435.01.T01:three_prime_utr;Parent=MsG0480019435.01.T01
Gene Sequence

>MsG0480019435.01.T01

ATGATGGGGGGAAGTTATGTTGAAGATGATTGGGAGTTAGCGTCGTCCGGATCAGCTAATGATGTTCATATTTCAGCTAATGAAGCTCGGACAGTGGTTTTGGTTGGCCGTACAGGCAATGGGAAAAGTGCAACCGGTAATAGTATTATTGGGAAACAGGTTTTTAGGTCGAGGGCTAGCTCGTCCGGTGTCACTTCCTCTTGTGAAATGCATGCTGCTGAGTTGAGTGATGGACAGATTGTCAATGTTATTGACACTCCAGGATTATTTGAAGTTTCTGCTGGATCTGAGTTTATTGGGAAAGAAATAGTCAAGTGCATTGACTTTGCCAAGGATGGTATCCATGCCATCCTTGTGGTGTTATCTGTCAGATCACGGTTTAGCGAGGAAGAAGAAAATGCTCTGCGCAGCTTGCAGACATTATTTGGAAGCAAGATTGTTGACTATATGATCGTGGTCTTCACGGGAGGGGATGGACTAGAAGATGATGGAGATACACTTGCCGATTATTTAGGCGGTGAATGTCCAGAGTCTTTGAAGATTGAGTCAAAGTTGAAGGTGTCAACTAAAAGGCTGGAGAAACAACTGAAAGAAGAGCATGCTGCAAGATTAAAAGCAGAAGACAATGCAAAGTTGGCTCAAAAGAAATCAGACAATGAAATACGAAAACTAAGGAAGAATCTTGAGGAGGCGCATGAAGAACTCCGCAAGCGAGGTGGTAATGGTTGTGCCATTCTATGA

Protein sequence

>MsG0480019435.01.T01

MMGGSYVEDDWELASSGSANDVHISANEARTVVLVGRTGNGKSATGNSIIGKQVFRSRASSSGVTSSCEMHAAELSDGQIVNVIDTPGLFEVSAGSEFIGKEIVKCIDFAKDGIHAILVVLSVRSRFSEEEENALRSLQTLFGSKIVDYMIVVFTGGDGLEDDGDTLADYLGGECPESLKIESKLKVSTKRLEKQLKEEHAARLKAEDNAKLAQKKSDNEIRKLRKNLEEAHEELRKRGGNGCAIL*