Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022755.01.T01 | XP_013457325.1 | 98.155 | 271 | 5 | 0 | 1 | 271 | 107 | 377 | 0 | 554 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022755.01.T01 | Q8RWB7 | 71.062 | 273 | 63 | 4 | 1 | 271 | 120 | 378 | 2.80E-140 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022755.01.T01 | A0A072UPV1 | 98.155 | 271 | 5 | 0 | 1 | 271 | 107 | 377 | 0.0 | 554 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180006000.01 | MsG0480022755.01 | 0.840317 | 9.350824e-58 | 1.326871e-54 |
| MsG0480020909.01 | MsG0480022755.01 | 0.829271 | 5.652826e-55 | 5.757991e-52 |
| MsG0480022755.01 | MsG0480022796.01 | 0.820053 | 8.405928e-53 | 6.581026e-50 |
| MsG0480022755.01 | MsG0480023053.01 | 0.802476 | 5.510916e-49 | 2.702073e-46 |
| MsG0480022755.01 | MsG0480023202.01 | 0.811699 | 6.144878e-51 | 3.829743e-48 |
| MsG0480022755.01 | MsG0480023463.01 | 0.801433 | 9.026242e-49 | 4.310014e-46 |
| MsG0480022755.01 | MsG0480023620.01 | 0.800701 | 1.273817e-48 | 5.970722e-46 |
| MsG0480022755.01 | MsG0480023657.01 | 0.806020 | 1.007584e-49 | 5.411001e-47 |
| MsG0480022755.01 | MsG0480023671.01 | 0.819619 | 1.056088e-52 | 8.167625e-50 |
| MsG0480022755.01 | MsG0680030918.01 | 0.834894 | 2.301688e-56 | 2.768882e-53 |
| MsG0480022755.01 | MsG0680032935.01 | 0.802170 | 6.371527e-49 | 3.099805e-46 |
| MsG0480022755.01 | MsG0780038603.01 | 0.831563 | 1.555264e-55 | 1.694086e-52 |
| MsG0480022755.01 | MsG0780039425.01 | 0.813608 | 2.348977e-51 | 1.541078e-48 |
| MsG0480022755.01 | MsG0780039655.01 | 0.808105 | 3.646314e-50 | 2.066682e-47 |
| MsG0480022755.01 | MsG0780040472.01 | 0.820922 | 5.310614e-53 | 4.259018e-50 |
| MsG0480022755.01 | MsG0780041735.01 | 0.826406 | 2.760575e-54 | 2.586695e-51 |
| MsG0480022755.01 | MsG0880042845.01 | 0.808513 | 2.984384e-50 | 1.709770e-47 |
| MsG0480022755.01 | MsG0880045294.01 | 0.803055 | 4.184263e-49 | 2.082043e-46 |
| MsG0480022755.01 | MsG0880045838.01 | 0.804047 | 2.605031e-49 | 1.329766e-46 |
| MsG0480022755.01 | MsG0880046762.01 | 0.806124 | 9.578214e-50 | 5.157401e-47 |
| MsG0380016140.01 | MsG0480022755.01 | 0.801981 | 6.967711e-49 | 3.373398e-46 |
| MsG0380016247.01 | MsG0480022755.01 | 0.845142 | 4.882835e-59 | 8.059586e-56 |
| MsG0380016703.01 | MsG0480022755.01 | 0.806660 | 7.386517e-50 | 4.031721e-47 |
| MsG0380016920.01 | MsG0480022755.01 | 0.801244 | 9.867107e-49 | 4.689297e-46 |
| MsG0380017061.01 | MsG0480022755.01 | 0.807338 | 5.306613e-50 | 2.948081e-47 |
| MsG0380017372.01 | MsG0480022755.01 | 0.800515 | 1.389840e-48 | 6.484201e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022755.01.T01 | MTR_4g094572 | 98.155 | 271 | 5 | 0 | 1 | 271 | 107 | 377 | 0.0 | 554 |
| MsG0480022755.01.T01 | MTR_5g077710 | 43.816 | 283 | 137 | 7 | 1 | 269 | 110 | 384 | 3.03e-75 | 234 |
| MsG0480022755.01.T01 | MTR_2g028610 | 42.908 | 282 | 140 | 8 | 1 | 269 | 185 | 458 | 1.37e-73 | 232 |
| MsG0480022755.01.T01 | MTR_2g028590 | 41.489 | 282 | 144 | 7 | 1 | 269 | 190 | 463 | 4.09e-73 | 231 |
| MsG0480022755.01.T01 | MTR_1g024005 | 40.925 | 281 | 144 | 5 | 1 | 269 | 154 | 424 | 4.77e-67 | 214 |
| MsG0480022755.01.T01 | MTR_3g113270 | 37.722 | 281 | 153 | 6 | 1 | 269 | 149 | 419 | 6.38e-62 | 201 |
| MsG0480022755.01.T01 | MTR_0010s0400 | 41.516 | 277 | 141 | 7 | 1 | 268 | 192 | 456 | 2.42e-59 | 195 |
| MsG0480022755.01.T01 | MTR_8g028460 | 38.462 | 286 | 149 | 7 | 1 | 268 | 209 | 485 | 7.90e-56 | 187 |
| MsG0480022755.01.T01 | MTR_3g071050 | 37.500 | 152 | 78 | 4 | 1 | 142 | 121 | 265 | 4.27e-24 | 98.6 |
| MsG0480022755.01.T01 | MTR_3g070620 | 38.849 | 139 | 73 | 4 | 72 | 208 | 62 | 190 | 5.14e-24 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022755.01.T01 | AT1G29790 | 71.062 | 273 | 63 | 4 | 1 | 271 | 120 | 378 | 2.85e-141 | 402 |
| MsG0480022755.01.T01 | AT1G29790 | 71.062 | 273 | 63 | 4 | 1 | 271 | 120 | 378 | 2.85e-141 | 402 |
| MsG0480022755.01.T01 | AT3G05390 | 41.155 | 277 | 142 | 7 | 1 | 268 | 195 | 459 | 4.64e-64 | 207 |
| MsG0480022755.01.T01 | AT5G40830 | 38.929 | 280 | 144 | 7 | 1 | 268 | 147 | 411 | 1.09e-62 | 202 |
| MsG0480022755.01.T01 | AT5G40830 | 38.929 | 280 | 144 | 7 | 1 | 268 | 147 | 411 | 1.09e-62 | 202 |
| MsG0480022755.01.T01 | AT3G27230 | 39.350 | 277 | 145 | 5 | 1 | 269 | 147 | 408 | 8.89e-62 | 200 |
| MsG0480022755.01.T01 | AT5G40830 | 37.591 | 274 | 116 | 6 | 1 | 268 | 147 | 371 | 5.16e-57 | 187 |
| MsG0480022755.01.T01 | AT4G01240 | 37.895 | 285 | 151 | 7 | 1 | 268 | 379 | 654 | 2.36e-55 | 189 |
Find 74 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTGATTCCTCTGTTATC+TGG | 0.165102 | 4:-76370062 | MsG0480022755.01.T01:CDS |
| TAAGCCTTTGATTGCGAAAA+TGG | 0.167124 | 4:-76369539 | MsG0480022755.01.T01:CDS |
| CTTGATGTTGGTGGTGGTAC+TGG | 0.282533 | 4:-76369868 | MsG0480022755.01.T01:CDS |
| CTCGATTTGTCCTTCTGATT+CGG | 0.339448 | 4:-76370208 | MsG0480022755.01.T01:CDS |
| CAGTGAGGCGGTTGCGTTAA+GGG | 0.357505 | 4:-76369773 | MsG0480022755.01.T01:CDS |
| GATCGCGAAATCAGCGAAAT+CGG | 0.372554 | 4:-76369905 | MsG0480022755.01.T01:CDS |
| ATCTGAAGAAGCTGTTGAAC+TGG | 0.377068 | 4:+76369925 | None:intergenic |
| ACCTGATTCCTCTGTTATCT+GGG | 0.386515 | 4:-76370061 | MsG0480022755.01.T01:CDS |
| GGCGGTGAATCGATGGATTC+CGG | 0.389269 | 4:-76369671 | MsG0480022755.01.T01:CDS |
| TTGGACGGAGTTTGTTTCTT+CGG | 0.393300 | 4:+76370117 | None:intergenic |
| AAGAAAGTGAAGTGGGCAAC+GGG | 0.410418 | 4:-76369511 | MsG0480022755.01.T01:CDS |
| TGAGAGGTGGAGGGTATTTG+TGG | 0.411452 | 4:-76369606 | MsG0480022755.01.T01:CDS |
| GAAGGTTCAAATCCGAGATC+AGG | 0.415306 | 4:+76369994 | None:intergenic |
| ACAGTGAGGCGGTTGCGTTA+AGG | 0.420442 | 4:-76369774 | MsG0480022755.01.T01:CDS |
| CAGCGGTTACCGATGTTTGA+TGG | 0.424081 | 4:-76369721 | MsG0480022755.01.T01:CDS |
| TTACGGCTGGGGCTTGATGT+TGG | 0.437399 | 4:-76369880 | MsG0480022755.01.T01:CDS |
| AAACAACGCCGGCGAGGGAG+AGG | 0.443660 | 4:+76370150 | None:intergenic |
| CGGCTGGGGCTTGATGTTGG+TGG | 0.458823 | 4:-76369877 | MsG0480022755.01.T01:CDS |
| TCAGGTAAGGAAGAAGGAAA+AGG | 0.465159 | 4:+76370078 | None:intergenic |
| AAGCCTTTGATTGCGAAAAT+GGG | 0.467826 | 4:-76369538 | MsG0480022755.01.T01:CDS |
| AACGCAACCGCCTCACTGTA+AGG | 0.473749 | 4:+76369778 | None:intergenic |
| ATCGGTAACCGCTGCTGCAA+CGG | 0.476365 | 4:+76369730 | None:intergenic |
| TGGTGGTACTGGCTCATTTG+CGG | 0.479932 | 4:-76369857 | MsG0480022755.01.T01:CDS |
| CAGGTAAGGAAGAAGGAAAA+GGG | 0.483236 | 4:+76370079 | None:intergenic |
| GTGGGAGGGCGGTGAATCGA+TGG | 0.484047 | 4:-76369678 | MsG0480022755.01.T01:CDS |
| AACCGTCAAAACCCTGATCT+CGG | 0.488287 | 4:-76370006 | MsG0480022755.01.T01:CDS |
| GCTGAAAGCTTAATTCTTCG+CGG | 0.489356 | 4:-76370180 | MsG0480022755.01.T01:CDS |
| TCCCAGATAACAGAGGAATC+AGG | 0.491176 | 4:+76370060 | None:intergenic |
| GAGGAATCAGGTAAGGAAGA+AGG | 0.511266 | 4:+76370072 | None:intergenic |
| GATAGAGTGTTGAGAGGTGG+AGG | 0.517077 | 4:-76369616 | MsG0480022755.01.T01:CDS |
| CTGGGGCTTGATGTTGGTGG+TGG | 0.522249 | 4:-76369874 | MsG0480022755.01.T01:CDS |
| ATGGTGTCGTGGATATTGTT+CGG | 0.522500 | 4:-76369702 | MsG0480022755.01.T01:CDS |
| ATGGATTCCGGTGACGATGT+TGG | 0.523220 | 4:-76369659 | MsG0480022755.01.T01:CDS |
| ACGGGGAATAAGACTGATGC+TGG | 0.528181 | 4:-76369493 | MsG0480022755.01.T01:CDS |
| TCGTGGATATTGTTCGGTGT+GGG | 0.528274 | 4:-76369696 | MsG0480022755.01.T01:CDS |
| AGGTGGAGGGTATTTGTGGT+TGG | 0.528302 | 4:-76369602 | MsG0480022755.01.T01:CDS |
| TGCTGCAACGGAACATGAAG+CGG | 0.536548 | 4:+76369742 | None:intergenic |
| GGATATTGTTCGGTGTGGGA+GGG | 0.536790 | 4:-76369692 | MsG0480022755.01.T01:CDS |
| TTGCGGCGGCGATGAAAGTA+CGG | 0.539661 | 4:-76369840 | MsG0480022755.01.T01:CDS |
| GATAACAGAGGAATCAGGTA+AGG | 0.541159 | 4:+76370065 | None:intergenic |
| TGGATATTGTTCGGTGTGGG+AGG | 0.543086 | 4:-76369693 | MsG0480022755.01.T01:CDS |
| GAGAGAAACAACGCCGGCGA+GGG | 0.553700 | 4:+76370145 | None:intergenic |
| AAGGTTCAAATCCGAGATCA+GGG | 0.554632 | 4:+76369995 | None:intergenic |
| TATTGTTCGGTGTGGGAGGG+CGG | 0.561682 | 4:-76369689 | MsG0480022755.01.T01:CDS |
| AGTGAGGCGGTTGCGTTAAG+GGG | 0.563157 | 4:-76369772 | MsG0480022755.01.T01:CDS |
| TCTGAAGAAGCTGTTGAACT+GGG | 0.564387 | 4:+76369926 | None:intergenic |
| TTCATGTTCCGTTGCAGCAG+CGG | 0.564533 | 4:-76369738 | MsG0480022755.01.T01:CDS |
| GGGTTACAAGAAAGTGAAGT+GGG | 0.565136 | 4:-76369518 | MsG0480022755.01.T01:CDS |
| GGAGTTTGTTTCTTCGGCGT+CGG | 0.566366 | 4:+76370123 | None:intergenic |
| CAAGAAAGTGAAGTGGGCAA+CGG | 0.572632 | 4:-76369512 | MsG0480022755.01.T01:CDS |
| GTTGTCATCCTCTCCCTCGC+CGG | 0.574392 | 4:-76370158 | MsG0480022755.01.T01:CDS |
| AACTTAGAAACTTCACGAGA+AGG | 0.584495 | 4:+76369976 | None:intergenic |
| GATGTTGATAGAGTGTTGAG+AGG | 0.584870 | 4:-76369622 | MsG0480022755.01.T01:CDS |
| GTCGTGGATATTGTTCGGTG+TGG | 0.593818 | 4:-76369697 | MsG0480022755.01.T01:CDS |
| GATGAAAGTACGGAATGTTA+CGG | 0.601069 | 4:-76369830 | MsG0480022755.01.T01:CDS |
| TCAGCGAGCTCCGAATCAGA+AGG | 0.610853 | 4:+76370198 | None:intergenic |
| ACCGATGTTTGATGGTGTCG+TGG | 0.615004 | 4:-76369713 | MsG0480022755.01.T01:CDS |
| GATGCTGGTGGTGTTAAGCA+TGG | 0.624372 | 4:-76369478 | MsG0480022755.01.T01:CDS |
| GGAGAGAAACAACGCCGGCG+AGG | 0.631888 | 4:+76370144 | None:intergenic |
| GTTGATAGAGTGTTGAGAGG+TGG | 0.635445 | 4:-76369619 | MsG0480022755.01.T01:CDS |
| TGTGACTCTCATCTTGAGAG+AGG | 0.637895 | 4:+76369424 | None:intergenic |
| ATAGAGTGTTGAGAGGTGGA+GGG | 0.639182 | 4:-76369615 | MsG0480022755.01.T01:CDS |
| ACAAATCGAGAACGGTGTGT+AGG | 0.640075 | 4:+76370221 | None:intergenic |
| TGGGTTACAAGAAAGTGAAG+TGG | 0.640685 | 4:-76369519 | MsG0480022755.01.T01:CDS |
| TCAGAAGGACAAATCGAGAA+CGG | 0.666336 | 4:+76370213 | None:intergenic |
| TCCACGACACCATCAAACAT+CGG | 0.670096 | 4:+76369712 | None:intergenic |
| TGGTACTGGCTCATTTGCGG+CGG | 0.680808 | 4:-76369854 | MsG0480022755.01.T01:CDS |
| TGTAGCGCCTTACAGTGAGG+CGG | 0.694193 | 4:-76369785 | MsG0480022755.01.T01:CDS |
| TGTTGTAGCGCCTTACAGTG+AGG | 0.710000 | 4:-76369788 | MsG0480022755.01.T01:CDS |
| GAAAGTACGGAATGTTACGG+TGG | 0.724848 | 4:-76369827 | MsG0480022755.01.T01:CDS |
| GCGTCGGAGAGAAACAACGC+CGG | 0.732120 | 4:+76370139 | None:intergenic |
| ATAACGATCCCAGATAACAG+AGG | 0.735131 | 4:+76370053 | None:intergenic |
| AGAAAGTGAAGTGGGCAACG+GGG | 0.746580 | 4:-76369510 | MsG0480022755.01.T01:CDS |
| GGGAATAAGACTGATGCTGG+TGG | 0.762122 | 4:-76369490 | MsG0480022755.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGGACCATTTTTTTAGTAA+GGG | - | Chr4:76370074-76370093 | MsG0480022755.01.T01:CDS | 25.0% |
| !!! | GTTGGACCATTTTTTTAGTA+AGG | - | Chr4:76370073-76370092 | MsG0480022755.01.T01:CDS | 30.0% |
| AACTTAGAAACTTCACGAGA+AGG | + | Chr4:76369684-76369703 | None:intergenic | 35.0% | |
| AAGCCTTTGATTGCGAAAAT+GGG | - | Chr4:76370119-76370138 | MsG0480022755.01.T01:CDS | 35.0% | |
| CCACACCCTTACTAAAAAAA+TGG | + | Chr4:76370082-76370101 | None:intergenic | 35.0% | |
| TAAGCCTTTGATTGCGAAAA+TGG | - | Chr4:76370118-76370137 | MsG0480022755.01.T01:CDS | 35.0% | |
| ! | GAAGAAGGAAAAGGGTTTTT+CGG | + | Chr4:76369573-76369592 | None:intergenic | 35.0% |
| ! | GATGAAAGTACGGAATGTTA+CGG | - | Chr4:76369827-76369846 | MsG0480022755.01.T01:CDS | 35.0% |
| ! | TAACCCATTTTCGCAATCAA+AGG | + | Chr4:76370125-76370144 | None:intergenic | 35.0% |
| !! | AATCAGCGAAATCGGTTTTA+CGG | - | Chr4:76369760-76369779 | MsG0480022755.01.T01:CDS | 35.0% |
| !!! | CCATTTTTTTAGTAAGGGTG+TGG | - | Chr4:76370079-76370098 | MsG0480022755.01.T01:CDS | 35.0% |
| AAAAACTCCAACATCGTCAC+CGG | + | Chr4:76370008-76370027 | None:intergenic | 40.0% | |
| AAGGTTCAAATCCGAGATCA+GGG | + | Chr4:76369665-76369684 | None:intergenic | 40.0% | |
| ACCTGATTCCTCTGTTATCT+GGG | - | Chr4:76369596-76369615 | MsG0480022755.01.T01:CDS | 40.0% | |
| ATAACGATCCCAGATAACAG+AGG | + | Chr4:76369607-76369626 | None:intergenic | 40.0% | |
| ATCTGAAGAAGCTGTTGAAC+TGG | + | Chr4:76369735-76369754 | None:intergenic | 40.0% | |
| CAGGTAAGGAAGAAGGAAAA+GGG | + | Chr4:76369581-76369600 | None:intergenic | 40.0% | |
| GATAACAGAGGAATCAGGTA+AGG | + | Chr4:76369595-76369614 | None:intergenic | 40.0% | |
| GCTGAAAGCTTAATTCTTCG+CGG | - | Chr4:76369477-76369496 | MsG0480022755.01.T01:CDS | 40.0% | |
| GGGTTACAAGAAAGTGAAGT+GGG | - | Chr4:76370139-76370158 | MsG0480022755.01.T01:CDS | 40.0% | |
| TACCTGATTCCTCTGTTATC+TGG | - | Chr4:76369595-76369614 | MsG0480022755.01.T01:CDS | 40.0% | |
| TCAGAAGGACAAATCGAGAA+CGG | + | Chr4:76369447-76369466 | None:intergenic | 40.0% | |
| TCAGGTAAGGAAGAAGGAAA+AGG | + | Chr4:76369582-76369601 | None:intergenic | 40.0% | |
| TCTGAAGAAGCTGTTGAACT+GGG | + | Chr4:76369734-76369753 | None:intergenic | 40.0% | |
| TGGGTTACAAGAAAGTGAAG+TGG | - | Chr4:76370138-76370157 | MsG0480022755.01.T01:CDS | 40.0% | |
| ! | CTCGATTTGTCCTTCTGATT+CGG | - | Chr4:76369449-76369468 | MsG0480022755.01.T01:CDS | 40.0% |
| ! | TTGGACGGAGTTTGTTTCTT+CGG | + | Chr4:76369543-76369562 | None:intergenic | 40.0% |
| !! | ATGGTGTCGTGGATATTGTT+CGG | - | Chr4:76369955-76369974 | MsG0480022755.01.T01:CDS | 40.0% |
| !! | GATGTTGATAGAGTGTTGAG+AGG | - | Chr4:76370035-76370054 | MsG0480022755.01.T01:CDS | 40.0% |
| !! | TTTTTCGGAAGCGAATTGGA+CGG | + | Chr4:76369558-76369577 | None:intergenic | 40.0% |
| AACCGTCAAAACCCTGATCT+CGG | - | Chr4:76369651-76369670 | MsG0480022755.01.T01:CDS | 45.0% | |
| AAGAAAGTGAAGTGGGCAAC+GGG | - | Chr4:76370146-76370165 | MsG0480022755.01.T01:CDS | 45.0% | |
| ACAAATCGAGAACGGTGTGT+AGG | + | Chr4:76369439-76369458 | None:intergenic | 45.0% | |
| CAAGAAAGTGAAGTGGGCAA+CGG | - | Chr4:76370145-76370164 | MsG0480022755.01.T01:CDS | 45.0% | |
| GAAGGTTCAAATCCGAGATC+AGG | + | Chr4:76369666-76369685 | None:intergenic | 45.0% | |
| GAGGAATCAGGTAAGGAAGA+AGG | + | Chr4:76369588-76369607 | None:intergenic | 45.0% | |
| GATCGCGAAATCAGCGAAAT+CGG | - | Chr4:76369752-76369771 | MsG0480022755.01.T01:CDS | 45.0% | |
| TCCACGACACCATCAAACAT+CGG | + | Chr4:76369948-76369967 | None:intergenic | 45.0% | |
| TCCCAGATAACAGAGGAATC+AGG | + | Chr4:76369600-76369619 | None:intergenic | 45.0% | |
| ! | GAAAGTACGGAATGTTACGG+TGG | - | Chr4:76369830-76369849 | MsG0480022755.01.T01:CDS | 45.0% |
| !! | AGGGTTTTTCGGAAGCGAAT+TGG | + | Chr4:76369562-76369581 | None:intergenic | 45.0% |
| !! | ATAGAGTGTTGAGAGGTGGA+GGG | - | Chr4:76370042-76370061 | MsG0480022755.01.T01:CDS | 45.0% |
| !! | ATCCGAGATCAGGGTTTTGA+CGG | + | Chr4:76369656-76369675 | None:intergenic | 45.0% |
| !! | GTTGATAGAGTGTTGAGAGG+TGG | - | Chr4:76370038-76370057 | MsG0480022755.01.T01:CDS | 45.0% |
| !! | TCGTGGATATTGTTCGGTGT+GGG | - | Chr4:76369961-76369980 | MsG0480022755.01.T01:CDS | 45.0% |
| ACGGGGAATAAGACTGATGC+TGG | - | Chr4:76370164-76370183 | MsG0480022755.01.T01:CDS | 50.0% | |
| AGAAAGTGAAGTGGGCAACG+GGG | - | Chr4:76370147-76370166 | MsG0480022755.01.T01:CDS | 50.0% | |
| ATGGATTCCGGTGACGATGT+TGG | - | Chr4:76369998-76370017 | MsG0480022755.01.T01:CDS | 50.0% | |
| CAGCGGTTACCGATGTTTGA+TGG | - | Chr4:76369936-76369955 | MsG0480022755.01.T01:CDS | 50.0% | |
| GGGAATAAGACTGATGCTGG+TGG | - | Chr4:76370167-76370186 | MsG0480022755.01.T01:CDS | 50.0% | |
| TGCTGCAACGGAACATGAAG+CGG | + | Chr4:76369918-76369937 | None:intergenic | 50.0% | |
| TGTTGTAGCGCCTTACAGTG+AGG | - | Chr4:76369869-76369888 | MsG0480022755.01.T01:CDS | 50.0% | |
| TTCATGTTCCGTTGCAGCAG+CGG | - | Chr4:76369919-76369938 | MsG0480022755.01.T01:CDS | 50.0% | |
| ! | GATGCTGGTGGTGTTAAGCA+TGG | - | Chr4:76370179-76370198 | MsG0480022755.01.T01:CDS | 50.0% |
| ! | GGAGTTTGTTTCTTCGGCGT+CGG | + | Chr4:76369537-76369556 | None:intergenic | 50.0% |
| ! | GTCGTGGATATTGTTCGGTG+TGG | - | Chr4:76369960-76369979 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | ACCGATGTTTGATGGTGTCG+TGG | - | Chr4:76369944-76369963 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | AGCGAAATCGGTTTTACGGC+TGG | - | Chr4:76369764-76369783 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | AGGTGGAGGGTATTTGTGGT+TGG | - | Chr4:76370055-76370074 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | CGAAATCGGTTTTACGGCTG+GGG | - | Chr4:76369766-76369785 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | CTTGATGTTGGTGGTGGTAC+TGG | - | Chr4:76369789-76369808 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | GATAGAGTGTTGAGAGGTGG+AGG | - | Chr4:76370041-76370060 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | GCGAAATCGGTTTTACGGCT+GGG | - | Chr4:76369765-76369784 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | GGATATTGTTCGGTGTGGGA+GGG | - | Chr4:76369965-76369984 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | TGAGAGGTGGAGGGTATTTG+TGG | - | Chr4:76370051-76370070 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | TGGATATTGTTCGGTGTGGG+AGG | - | Chr4:76369964-76369983 | MsG0480022755.01.T01:CDS | 50.0% |
| !! | TGGTGGTACTGGCTCATTTG+CGG | - | Chr4:76369800-76369819 | MsG0480022755.01.T01:CDS | 50.0% |
| AACGCAACCGCCTCACTGTA+AGG | + | Chr4:76369882-76369901 | None:intergenic | 55.0% | |
| ACAGTGAGGCGGTTGCGTTA+AGG | - | Chr4:76369883-76369902 | MsG0480022755.01.T01:CDS | 55.0% | |
| AGTGAGGCGGTTGCGTTAAG+GGG | - | Chr4:76369885-76369904 | MsG0480022755.01.T01:CDS | 55.0% | |
| ATCGGTAACCGCTGCTGCAA+CGG | + | Chr4:76369930-76369949 | None:intergenic | 55.0% | |
| CAGTGAGGCGGTTGCGTTAA+GGG | - | Chr4:76369884-76369903 | MsG0480022755.01.T01:CDS | 55.0% | |
| TCAGCGAGCTCCGAATCAGA+AGG | + | Chr4:76369462-76369481 | None:intergenic | 55.0% | |
| TGTAGCGCCTTACAGTGAGG+CGG | - | Chr4:76369872-76369891 | MsG0480022755.01.T01:CDS | 55.0% | |
| TTACGGCTGGGGCTTGATGT+TGG | - | Chr4:76369777-76369796 | MsG0480022755.01.T01:CDS | 55.0% | |
| TTGCGGCGGCGATGAAAGTA+CGG | - | Chr4:76369817-76369836 | MsG0480022755.01.T01:CDS | 55.0% | |
| ! | GGCGGTGAATCGATGGATTC+CGG | - | Chr4:76369986-76370005 | MsG0480022755.01.T01:CDS | 55.0% |
| !! | TATTGTTCGGTGTGGGAGGG+CGG | - | Chr4:76369968-76369987 | MsG0480022755.01.T01:CDS | 55.0% |
| !! | TGGTACTGGCTCATTTGCGG+CGG | - | Chr4:76369803-76369822 | MsG0480022755.01.T01:CDS | 55.0% |
| GAGAGAAACAACGCCGGCGA+GGG | + | Chr4:76369515-76369534 | None:intergenic | 60.0% | |
| GCGTCGGAGAGAAACAACGC+CGG | + | Chr4:76369521-76369540 | None:intergenic | 60.0% | |
| GTTGTCATCCTCTCCCTCGC+CGG | - | Chr4:76369499-76369518 | MsG0480022755.01.T01:CDS | 60.0% | |
| ! | CTGGGGCTTGATGTTGGTGG+TGG | - | Chr4:76369783-76369802 | MsG0480022755.01.T01:CDS | 60.0% |
| AAACAACGCCGGCGAGGGAG+AGG | + | Chr4:76369510-76369529 | None:intergenic | 65.0% | |
| CGGCTGGGGCTTGATGTTGG+TGG | - | Chr4:76369780-76369799 | MsG0480022755.01.T01:CDS | 65.0% | |
| GGAGAGAAACAACGCCGGCG+AGG | + | Chr4:76369516-76369535 | None:intergenic | 65.0% | |
| GTGGGAGGGCGGTGAATCGA+TGG | - | Chr4:76369979-76369998 | MsG0480022755.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 76369432 | 76370247 | 76369432 | ID=MsG0480022755.01;Name=MsG0480022755.01 |
| Chr4 | mRNA | 76369432 | 76370247 | 76369432 | ID=MsG0480022755.01.T01;Parent=MsG0480022755.01;Name=MsG0480022755.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|271 |
| Chr4 | exon | 76369432 | 76370247 | 76369432 | ID=MsG0480022755.01.T01:exon:1617;Parent=MsG0480022755.01.T01 |
| Chr4 | CDS | 76369432 | 76370247 | 76369432 | ID=MsG0480022755.01.T01:cds;Parent=MsG0480022755.01.T01 |
| Gene Sequence |
| Protein sequence |
