AlfalfaGEDB | MsG0480023671.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023671.01

KEGG: -
GO: -
PFAM: PF13839 PF14416

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023671.01.T01	XP_013447172.1	91.295	448	11	3	1	446	1	422	0	832

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023671.01.T01	O82509	54.362	447	182	4	1	446	3	428	0	515

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023671.01.T01	A0A072TUJ8	91.295	448	11	3	1	446	1	422	0.0	832

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180004707.01	MsG0480023671.01	0.818087	2.353618e-52	1.744712e-49
MsG0180006000.01	MsG0480023671.01	0.802171	6.366971e-49	3.097718e-46
MsG0280010977.01	MsG0480023671.01	0.801780	7.661234e-49	3.690408e-46
MsG0480018845.01	MsG0480023671.01	0.806706	7.222345e-50	3.946958e-47
MsG0480019922.01	MsG0480023671.01	0.804913	1.718923e-49	8.973025e-47
MsG0480020699.01	MsG0480023671.01	0.829563	4.799812e-55	4.930194e-52
MsG0480020909.01	MsG0480023671.01	0.801859	7.379164e-49	3.561915e-46
MsG0480020965.01	MsG0480023671.01	0.806701	7.240061e-50	3.956137e-47
MsG0480021013.01	MsG0480023671.01	0.813432	2.567842e-51	1.676654e-48
MsG0480022755.01	MsG0480023671.01	0.819619	1.056088e-52	8.167625e-50
MsG0480023647.01	MsG0480023671.01	0.855695	5.309240e-62	1.236271e-58
MsG0480023671.01	MsG0580024462.01	0.803982	2.687268e-49	1.369513e-46
MsG0480023671.01	MsG0780036752.01	0.806572	7.708896e-50	4.198470e-47
MsG0480023671.01	MsG0780039656.01	0.810841	9.433842e-51	5.748260e-48
MsG0480023671.01	MsG0780041735.01	0.800413	1.458135e-48	6.785378e-46
MsG0480023671.01	MsG0880042773.01	0.804961	1.680194e-49	8.781238e-47
MsG0480023671.01	MsG0880042845.01	0.802279	6.048419e-49	2.950932e-46
MsG0480023671.01	MsG0880043750.01	0.814645	1.386607e-51	9.356251e-49
MsG0480023671.01	MsG0880045483.01	0.809632	1.719022e-50	1.014600e-47
MsG0480023671.01	MsG0880047596.01	0.804646	1.954918e-49	1.013387e-46
MsG0380016140.01	MsG0480023671.01	0.814697	1.350140e-51	9.122853e-49
MsG0380016247.01	MsG0480023671.01	0.853773	1.914571e-61	4.183013e-58
MsG0380017159.01	MsG0480023671.01	0.831750	1.398418e-55	1.531825e-52
MsG0380017559.01	MsG0480023671.01	0.815211	1.038459e-51	7.114688e-49
MsG0280006762.01	MsG0480023671.01	0.815737	7.932574e-52	5.514458e-49
MsG0280007067.01	MsG0480023671.01	0.804902	1.728435e-49	9.020141e-47

PPI

Gene1	Gene2	Type
MsG0580025833.01	MsG0480023671.01	PPI
MsG0480023671.01	MsG0580025834.01	PPI
MsG0580025831.01	MsG0480023671.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023671.01.T01	MTR_8g099300	91.295	448	11	3	1	446	1	422	0.0	832
MsG0480023671.01.T01	MTR_8g027900	67.143	350	114	1	97	446	210	558	0.0	522
MsG0480023671.01.T01	MTR_6g016880	45.821	347	182	3	98	443	78	419	9.93e-114	341
MsG0480023671.01.T01	MTR_7g019120	38.479	434	236	9	12	443	16	420	9.12e-109	328
MsG0480023671.01.T01	MTR_5g035090	43.059	353	188	8	97	443	82	427	9.70e-100	305
MsG0480023671.01.T01	MTR_5g035070	44.413	358	188	7	92	443	81	433	5.73e-98	301
MsG0480023671.01.T01	MTR_5g035150	42.045	352	193	6	98	443	85	431	8.63e-98	300
MsG0480023671.01.T01	MTR_8g104970	42.416	356	193	8	97	446	119	468	1.15e-97	301
MsG0480023671.01.T01	MTR_3g109840	41.808	354	193	6	98	446	73	418	4.23e-97	298
MsG0480023671.01.T01	MTR_5g035080	41.061	358	197	8	93	443	70	420	2.04e-96	296
MsG0480023671.01.T01	MTR_7g033230	41.127	355	197	6	98	446	264	612	2.93e-93	294
MsG0480023671.01.T01	MTR_2g016060	42.373	354	184	9	101	444	58	401	1.14e-92	286
MsG0480023671.01.T01	MTR_7g033230	41.127	355	197	6	98	446	334	682	2.12e-92	294
MsG0480023671.01.T01	MTR_6g016875	41.243	354	191	7	98	443	64	408	6.79e-91	282
MsG0480023671.01.T01	MTR_6g007777	36.962	395	219	8	56	443	86	457	5.34e-87	273
MsG0480023671.01.T01	MTR_1g076690	34.804	408	251	9	44	443	170	570	2.66e-79	257
MsG0480023671.01.T01	MTR_6g061710	34.181	354	219	8	98	443	167	514	1.38e-73	240
MsG0480023671.01.T01	MTR_5g035140	39.130	253	143	6	197	443	18	265	2.61e-57	190
MsG0480023671.01.T01	MTR_7g093450	32.961	358	204	12	97	439	247	583	2.50e-53	188
MsG0480023671.01.T01	MTR_0136s0010	33.609	363	195	12	97	439	169	505	4.52e-53	186
MsG0480023671.01.T01	MTR_7g117160	46.231	199	57	6	244	442	41	189	1.41e-48	164
MsG0480023671.01.T01	MTR_5g033800	31.092	357	211	13	97	439	144	479	8.87e-46	166
MsG0480023671.01.T01	MTR_7g094750	30.163	368	227	12	90	444	83	433	8.99e-46	165
MsG0480023671.01.T01	MTR_4g126950	29.891	368	210	14	97	444	108	447	1.46e-44	162
MsG0480023671.01.T01	MTR_8g069790	29.917	361	210	12	97	439	177	512	3.28e-43	159
MsG0480023671.01.T01	MTR_5g059400	30.252	357	214	10	98	439	175	511	2.39e-41	154
MsG0480023671.01.T01	MTR_1g116130	30.252	357	214	10	98	439	175	511	2.39e-41	154
MsG0480023671.01.T01	MTR_3g070900	28.771	358	233	10	98	445	106	451	1.00e-40	151
MsG0480023671.01.T01	MTR_4g121560	29.235	366	223	14	94	444	110	454	7.25e-40	149
MsG0480023671.01.T01	MTR_8g093530	30.084	359	208	12	97	443	89	416	8.01e-40	148
MsG0480023671.01.T01	MTR_7g109550	26.230	427	265	12	34	439	66	463	3.62e-39	147
MsG0480023671.01.T01	MTR_4g092830	26.486	370	229	9	98	446	48	395	7.35e-39	145
MsG0480023671.01.T01	MTR_8g093870	27.548	363	223	12	98	443	133	472	1.04e-38	146
MsG0480023671.01.T01	MTR_4g016940	26.359	368	237	11	91	443	79	427	1.56e-38	144
MsG0480023671.01.T01	MTR_7g019140	39.665	179	85	4	12	190	16	171	1.00e-37	135
MsG0480023671.01.T01	MTR_5g071350	28.926	363	212	10	98	439	58	395	1.18e-37	142
MsG0480023671.01.T01	MTR_8g463790	29.396	364	206	16	98	439	71	405	2.42e-37	141
MsG0480023671.01.T01	MTR_2g022560	28.846	364	220	13	98	444	97	438	2.73e-37	142
MsG0480023671.01.T01	MTR_3g464570	28.696	345	226	8	98	438	43	371	1.31e-36	138
MsG0480023671.01.T01	MTR_7g068920	27.717	368	232	11	91	443	73	421	3.60e-36	138
MsG0480023671.01.T01	MTR_3g071650	27.273	352	232	10	98	439	89	426	5.04e-36	138
MsG0480023671.01.T01	MTR_4g014440	26.757	370	227	16	96	443	60	407	9.06e-36	137
MsG0480023671.01.T01	MTR_1g050448	26.593	361	218	12	95	443	50	375	3.40e-35	134
MsG0480023671.01.T01	MTR_3g021090	29.577	355	208	11	98	445	31	350	1.03e-34	134
MsG0480023671.01.T01	MTR_3g035830	28.451	355	212	11	98	445	31	350	1.40e-34	132
MsG0480023671.01.T01	MTR_7g070060	27.049	366	243	13	92	445	58	411	2.24e-34	133
MsG0480023671.01.T01	MTR_3g021060	28.249	354	212	10	97	443	45	363	2.88e-34	132
MsG0480023671.01.T01	MTR_5g083260	25.823	395	254	14	60	439	50	420	6.12e-34	132
MsG0480023671.01.T01	MTR_1g058380	26.882	372	228	14	92	444	49	395	1.09e-33	131
MsG0480023671.01.T01	MTR_1g112210	27.066	351	218	13	97	439	58	378	1.34e-33	130
MsG0480023671.01.T01	MTR_6g016240	27.224	371	216	13	98	441	71	414	3.14e-32	127
MsG0480023671.01.T01	MTR_5g082880	26.923	364	235	12	98	445	165	513	6.11e-32	127
MsG0480023671.01.T01	MTR_4g125060	25.138	362	233	12	98	443	132	471	6.92e-32	127
MsG0480023671.01.T01	MTR_1g112210	26.724	348	210	13	97	439	58	365	8.12e-32	125
MsG0480023671.01.T01	MTR_4g125060	25.138	362	233	12	98	443	200	539	1.05e-31	127
MsG0480023671.01.T01	MTR_4g125060	25.414	362	232	12	98	443	171	510	2.75e-31	125
MsG0480023671.01.T01	MTR_3g049330	29.745	353	210	12	98	444	31	351	7.64e-31	122
MsG0480023671.01.T01	MTR_5g035120	47.917	96	50	0	98	193	75	170	1.32e-30	116
MsG0480023671.01.T01	MTR_2g073510	29.494	356	208	13	97	443	32	353	2.40e-30	120
MsG0480023671.01.T01	MTR_3g090120	25.745	369	215	15	98	444	129	460	3.74e-29	119
MsG0480023671.01.T01	MTR_2g091175	27.635	351	213	12	95	439	47	362	5.38e-29	117
MsG0480023671.01.T01	MTR_4g088030	26.912	353	224	10	95	444	30	351	1.64e-28	115
MsG0480023671.01.T01	MTR_7g094750	29.412	255	160	8	90	333	83	328	2.03e-28	115
MsG0480023671.01.T01	MTR_2g015720	28.448	348	208	13	98	439	42	354	2.04e-28	115
MsG0480023671.01.T01	MTR_5g033800	30.769	247	151	8	97	333	144	380	1.01e-27	114
MsG0480023671.01.T01	MTR_5g034810	27.273	352	218	12	98	444	35	353	8.36e-27	110
MsG0480023671.01.T01	MTR_1g111010	27.424	361	216	12	90	445	24	343	1.06e-26	110
MsG0480023671.01.T01	MTR_4g087730	26.000	350	225	10	98	444	45	363	1.26e-25	107
MsG0480023671.01.T01	MTR_2g073500	27.606	355	212	11	98	444	29	346	1.04e-24	104
MsG0480023671.01.T01	MTR_4g014430	24.595	370	234	12	93	443	103	446	1.93e-24	105
MsG0480023671.01.T01	MTR_4g079700	25.852	352	218	10	95	439	44	359	3.66e-24	103
MsG0480023671.01.T01	MTR_7g019130	37.600	125	74	4	215	337	1	123	7.85e-22	91.7
MsG0480023671.01.T01	MTR_0929s0010	67.347	49	16	0	97	145	78	126	6.75e-19	82.8
MsG0480023671.01.T01	MTR_7g070060	29.189	185	122	5	92	271	58	238	1.73e-18	86.3
MsG0480023671.01.T01	MTR_7g070060	25.081	307	207	12	150	445	15	309	7.67e-18	84.3
MsG0480023671.01.T01	MTR_3g464570	25.979	281	188	8	162	438	3	267	1.14e-16	80.5
MsG0480023671.01.T01	MTR_0929s0020	34.831	89	55	3	215	302	1	87	2.05e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023671.01.T01	AT4G11090	54.362	447	182	4	1	446	3	428	0.0	515
MsG0480023671.01.T01	AT4G23790	55.605	446	173	6	5	446	6	430	1.88e-176	501
MsG0480023671.01.T01	AT1G01430	52.203	454	184	10	5	445	16	449	2.21e-161	463
MsG0480023671.01.T01	AT4G01080	56.215	354	147	3	93	445	86	432	1.23e-154	446
MsG0480023671.01.T01	AT5G15890	46.439	351	176	6	94	443	183	522	2.19e-108	330
MsG0480023671.01.T01	AT5G15900	43.553	349	188	5	98	443	67	409	3.53e-102	311
MsG0480023671.01.T01	AT5G15900	43.553	349	188	5	98	443	86	428	5.65e-102	311
MsG0480023671.01.T01	AT1G70230	42.735	351	186	8	94	443	75	411	2.95e-100	306
MsG0480023671.01.T01	AT3G02440	38.916	406	216	7	47	445	90	470	5.47e-100	307
MsG0480023671.01.T01	AT3G02440	38.916	406	216	7	47	445	98	478	9.75e-100	307
MsG0480023671.01.T01	AT3G28150	38.177	351	204	5	97	443	69	410	6.22e-88	274
MsG0480023671.01.T01	AT5G51640	35.556	360	211	8	97	443	137	488	1.98e-77	249
MsG0480023671.01.T01	AT4G25360	35.097	359	213	8	97	443	174	524	9.56e-74	241
MsG0480023671.01.T01	AT4G25360	35.097	359	213	8	97	443	174	524	9.56e-74	241
MsG0480023671.01.T01	AT5G06700	31.781	365	208	10	98	444	255	596	7.22e-51	182
MsG0480023671.01.T01	AT3G12060	32.033	359	202	11	98	438	196	530	1.66e-50	180
MsG0480023671.01.T01	AT3G06080	31.915	376	217	14	86	444	93	446	1.04e-46	168
MsG0480023671.01.T01	AT5G49340	30.833	360	221	9	92	439	94	437	3.27e-46	166
MsG0480023671.01.T01	AT5G20590	30.387	362	205	14	98	439	141	475	8.93e-44	160
MsG0480023671.01.T01	AT5G19160	31.215	362	219	12	98	444	99	445	1.67e-43	159
MsG0480023671.01.T01	AT1G60790	32.044	362	203	14	98	439	190	528	1.76e-42	157
MsG0480023671.01.T01	AT2G14530	27.473	364	233	11	95	443	59	406	3.62e-39	146
MsG0480023671.01.T01	AT1G48880	29.526	359	202	12	97	440	114	436	1.34e-38	145
MsG0480023671.01.T01	AT5G58600	28.375	363	231	9	91	444	59	401	2.30e-38	144
MsG0480023671.01.T01	AT5G64020	28.000	375	218	11	98	443	57	408	2.85e-38	144
MsG0480023671.01.T01	AT2G40160	27.298	359	238	10	98	444	77	424	5.03e-38	143
MsG0480023671.01.T01	AT5G64470	29.363	361	227	13	98	444	55	401	5.03e-38	143
MsG0480023671.01.T01	AT2G40160	27.684	354	233	10	98	439	77	419	6.12e-38	143
MsG0480023671.01.T01	AT5G64470	29.609	358	224	13	98	444	55	395	7.41e-38	142
MsG0480023671.01.T01	AT5G06230	28.533	368	223	13	97	445	20	366	9.40e-38	141
MsG0480023671.01.T01	AT5G20680	28.150	373	208	15	98	443	118	457	1.27e-37	143
MsG0480023671.01.T01	AT5G06230	28.533	368	223	13	97	445	61	407	1.95e-37	141
MsG0480023671.01.T01	AT5G20680	28.150	373	208	15	98	443	194	533	2.12e-37	143
MsG0480023671.01.T01	AT5G20680	28.150	373	208	15	98	443	212	551	2.39e-37	143
MsG0480023671.01.T01	AT5G20680	28.150	373	208	15	98	443	212	551	2.39e-37	143
MsG0480023671.01.T01	AT5G20680	28.150	373	208	15	98	443	212	551	2.39e-37	143
MsG0480023671.01.T01	AT5G20680	28.150	373	208	15	98	443	212	551	2.39e-37	143
MsG0480023671.01.T01	AT3G62390	27.520	367	206	15	97	439	137	467	3.13e-36	139
MsG0480023671.01.T01	AT1G73140	27.793	367	208	14	98	439	67	401	1.39e-35	136
MsG0480023671.01.T01	AT5G01360	26.016	369	232	15	91	440	29	375	2.90e-35	135
MsG0480023671.01.T01	AT3G11570	28.655	342	214	12	114	444	98	420	2.98e-35	135
MsG0480023671.01.T01	AT5G01360	26.016	369	232	15	91	440	85	431	8.02e-35	134
MsG0480023671.01.T01	AT2G30010	25.668	374	237	10	89	444	47	397	1.12e-34	133
MsG0480023671.01.T01	AT2G30010	25.668	374	237	10	89	444	90	440	1.76e-34	134
MsG0480023671.01.T01	AT3G54260	27.322	366	208	15	98	445	51	376	1.11e-33	130
MsG0480023671.01.T01	AT3G11030	26.857	350	235	9	98	438	106	443	2.90e-33	130
MsG0480023671.01.T01	AT2G30900	28.691	359	199	13	98	439	43	361	9.31e-33	127
MsG0480023671.01.T01	AT2G40320	25.490	357	232	11	98	439	81	418	1.11e-32	128
MsG0480023671.01.T01	AT2G31110	29.014	355	208	12	93	439	40	358	1.34e-31	124
MsG0480023671.01.T01	AT3G55990	24.518	363	252	10	93	445	135	485	1.46e-31	126
MsG0480023671.01.T01	AT2G40150	24.044	366	256	9	93	445	66	422	2.69e-31	124
MsG0480023671.01.T01	AT2G38320	25.946	370	239	13	94	445	54	406	4.26e-31	124
MsG0480023671.01.T01	AT3G14850	29.330	358	212	14	95	444	31	355	7.53e-31	122
MsG0480023671.01.T01	AT3G06080	32.677	254	149	8	98	339	103	346	5.56e-30	119
MsG0480023671.01.T01	AT2G34070	27.326	344	219	9	98	439	65	379	1.10e-29	119
MsG0480023671.01.T01	AT5G01620	26.810	373	225	15	92	443	104	449	1.68e-29	120
MsG0480023671.01.T01	AT5G01620	26.810	373	225	15	92	443	104	449	1.68e-29	120
MsG0480023671.01.T01	AT5G01620	26.810	373	225	15	92	443	112	457	1.75e-29	120
MsG0480023671.01.T01	AT1G29050	28.291	357	214	11	95	444	58	379	1.78e-29	119
MsG0480023671.01.T01	AT5G19160	32.389	247	147	8	98	333	99	336	1.16e-28	116
MsG0480023671.01.T01	AT1G78710	26.216	370	210	15	94	445	34	358	1.67e-27	113
MsG0480023671.01.T01	AT2G42570	26.912	353	212	13	93	436	42	357	3.27e-27	112
MsG0480023671.01.T01	AT5G64470	28.731	268	173	10	98	354	55	315	2.05e-25	106
MsG0480023671.01.T01	AT5G64470	28.625	269	174	10	98	355	55	316	2.32e-25	106
MsG0480023671.01.T01	AT2G38320	25.150	334	217	11	128	445	7	323	3.27e-25	105
MsG0480023671.01.T01	AT2G40160	27.386	241	165	5	98	333	77	312	5.96e-25	105
MsG0480023671.01.T01	AT5G20590	29.249	253	147	10	98	333	141	378	3.70e-24	103
MsG0480023671.01.T01	AT5G58600	28.279	244	159	6	91	331	59	289	7.53e-24	101
MsG0480023671.01.T01	AT2G37720	24.202	376	229	11	93	443	138	482	3.44e-23	102
MsG0480023671.01.T01	AT3G62390	27.068	266	162	9	97	346	137	386	6.88e-23	100
MsG0480023671.01.T01	AT5G06230	28.016	257	159	9	97	336	61	308	5.50e-22	96.3
MsG0480023671.01.T01	AT2G31110	30.939	181	116	3	93	273	40	211	5.66e-21	92.8
MsG0480023671.01.T01	AT2G30900	30.275	218	136	6	98	313	43	246	1.43e-20	91.7
MsG0480023671.01.T01	AT1G78710	30.435	184	111	7	94	273	27	197	6.46e-17	81.6
MsG0480023671.01.T01	AT3G14850	27.208	283	165	14	170	444	3	252	3.56e-12	66.6

Find 96 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACCCAAGTTTAACTTGTTT+TGG	0.198966	4:-88386722	None:intergenic
CGGAAATACACCGATTCTTT+TGG	0.229014	4:-88386334	None:intergenic
AGAAGTTTGAGGTGGGGTTT+GGG	0.248412	4:-88386523	None:intergenic
CATGTTTCATTTGTATAAAT+TGG	0.250767	4:-88386821	None:intergenic
CCATGAGAATGACACTATAT+TGG	0.259649	4:+88388719	MsG0480023671.01.T01:CDS
AAGAAGTTTGAGGTGGGGTT+TGG	0.275870	4:-88386524	None:intergenic
TCGACAAACTGGATAGTAAA+TGG	0.284885	4:+88388625	MsG0480023671.01.T01:CDS
TGTTTGCATTGGTGCTTGCC+TGG	0.290741	4:+88389161	MsG0480023671.01.T01:CDS
CGAAGGAAAGTGCCAGCTTT+TGG	0.293863	4:-88388502	None:intergenic
ACTTCAGTATGTCAGTTATT+TGG	0.298802	4:+88388529	MsG0480023671.01.T01:CDS
GGATAGATTGAGAATGGTTT+TGG	0.300507	4:-88386295	None:intergenic
CTTGCTCTGCACGCTTTCTA+AGG	0.308263	4:+88387030	MsG0480023671.01.T01:CDS
TCCATCTCACCTTCTTTAAT+CGG	0.314421	4:-88388936	None:intergenic
GGTAAAGTGTGGGCGCTTAT+TGG	0.317484	4:+88386977	MsG0480023671.01.T01:CDS
TAAATTGGACCCAATGGATT+TGG	0.320873	4:-88386806	None:intergenic
GGATAACAAAATCAGTTAAA+TGG	0.327061	4:+88389230	MsG0480023671.01.T01:exon
TAATAATGTAATCGAAGTTT+AGG	0.335296	4:-88388659	None:intergenic
TGAGTTAGAAGAGTTTAAAA+AGG	0.345867	4:+88388992	MsG0480023671.01.T01:CDS
CTCCATTATGATGTCATTCC+AGG	0.357571	4:-88389195	None:intergenic
AACAAGAACATGACAGATCT+AGG	0.367360	4:+88388762	MsG0480023671.01.T01:CDS
CTGAACATGGTTTCGAGAAA+TGG	0.368246	4:-88387005	None:intergenic
CATGAGAATGACACTATATT+GGG	0.390403	4:+88388720	MsG0480023671.01.T01:CDS
TTTGGAGTTGGTGTTGCTTA+CGG	0.402203	4:-88386316	None:intergenic
GTTTGCATTGGTGCTTGCCT+GGG	0.409694	4:+88389162	MsG0480023671.01.T01:CDS
CAAAATCAAACCCTTGTGAT+TGG	0.410152	4:-88388841	None:intergenic
AAACAAGTTAAACTTGGGTT+GGG	0.415221	4:+88386725	MsG0480023671.01.T01:CDS
TATGGACCCGGATGCCCATC+TGG	0.419716	4:-88389086	None:intergenic
TTTGAGACCAGATGGGCATC+CGG	0.423399	4:+88389079	MsG0480023671.01.T01:CDS
GGTTTGGGGTTCAGTGAGAG+TGG	0.428680	4:-88386508	None:intergenic
AAAACAAGTTAAACTTGGGT+TGG	0.435145	4:+88386724	MsG0480023671.01.T01:CDS
AAGGGTTGAAATTGCCTGTA+TGG	0.436352	4:-88389104	None:intergenic
TGAGCTATATCTCGACAAAC+TGG	0.441451	4:+88388614	MsG0480023671.01.T01:CDS
ATGTCATTCCAGGAGTCTAT+AGG	0.447469	4:-88389185	None:intergenic
TTTCCAAAACAAGTTAAACT+TGG	0.449874	4:+88386719	MsG0480023671.01.T01:CDS
CTCCTGGAATGACATCATAA+TGG	0.452437	4:+88389193	MsG0480023671.01.T01:CDS
GTTTGGGGTTCAGTGAGAGT+GGG	0.464045	4:-88386507	None:intergenic
TTTGAAGAGGGAGTTGTTGA+AGG	0.465492	4:-88386557	None:intergenic
TGCCTGGGCCTATAGACTCC+TGG	0.470914	4:+88389177	MsG0480023671.01.T01:CDS
AAAGAGAAGAAGTTTGAGGT+GGG	0.480555	4:-88386530	None:intergenic
TTTGTATAAATTGGACCCAA+TGG	0.481637	4:-88386812	None:intergenic
GATTACATTATTATTTCAAC+GGG	0.486220	4:+88388669	MsG0480023671.01.T01:CDS
CGATTACATTATTATTTCAA+CGG	0.495469	4:+88388668	MsG0480023671.01.T01:CDS
TCAGAAAGAGAAGAAGTTTG+AGG	0.498283	4:-88386534	None:intergenic
TTGAGACCAGATGGGCATCC+GGG	0.502873	4:+88389080	MsG0480023671.01.T01:CDS
TTCCAAAACAAGTTAAACTT+GGG	0.503409	4:+88386720	MsG0480023671.01.T01:CDS
GCTTACGGATAGATTGAGAA+TGG	0.505838	4:-88386301	None:intergenic
AACACCAACTCCAAAAGAAT+CGG	0.511522	4:+88386324	MsG0480023671.01.T01:five_prime_UTR
ATGGGCATCCGGGTCCATAC+AGG	0.516143	4:+88389090	MsG0480023671.01.T01:CDS
GAAGTTTGAGGTGGGGTTTG+GGG	0.523244	4:-88386522	None:intergenic
TTATTATTTCAACGGGAAAG+TGG	0.527276	4:+88388676	MsG0480023671.01.T01:CDS
ATCAAGTTGAGAAACCTTTG+AGG	0.527808	4:-88386950	None:intergenic
ATAGGTAACTCACAATCTCT+AGG	0.532576	4:-88386920	None:intergenic
TGATTGGGTACCAAATCCAT+TGG	0.533144	4:+88386796	MsG0480023671.01.T01:CDS
GACACTATATTGGGCTGTCA+CGG	0.534615	4:+88388729	MsG0480023671.01.T01:CDS
TTCAGACTGATTGTTTGCAT+TGG	0.536161	4:+88389150	MsG0480023671.01.T01:CDS
TTCCAGGAGTCTATAGGCCC+AGG	0.538000	4:-88389179	None:intergenic
ACCCACATGCACAACTAGCA+TGG	0.540809	4:-88389276	None:intergenic
AAGAGAAGAAGTTTGAGGTG+GGG	0.541698	4:-88386529	None:intergenic
CATCGTCACTTCCAATCACA+AGG	0.543767	4:+88388830	MsG0480023671.01.T01:CDS
GAAAATGGAGAGTGGTTTAG+CGG	0.544102	4:+88388891	MsG0480023671.01.T01:CDS
GCCGATTAAAGAAGGTGAGA+TGG	0.546742	4:+88388935	MsG0480023671.01.T01:CDS
TCTGGTCTCAAAAGCGAAAG+TGG	0.551364	4:-88389068	None:intergenic
CAACTCTCTCCCACCGACAC+TGG	0.551711	4:+88386597	MsG0480023671.01.T01:CDS
GAAAGAGAAGAAGTTTGAGG+TGG	0.556991	4:-88386531	None:intergenic
CCAATATAGTGTCATTCTCA+TGG	0.557467	4:-88388719	None:intergenic
AGAACTGAGCCGATTAAAGA+AGG	0.561383	4:+88388927	MsG0480023671.01.T01:CDS
GATTGGGTACCAAATCCATT+GGG	0.561920	4:+88386797	MsG0480023671.01.T01:CDS
GAGTGAGAAGTAACTTGATG+AGG	0.562325	4:-88386437	None:intergenic
ATAATGGAGATGGTTGTCAA+TGG	0.563525	4:+88389209	MsG0480023671.01.T01:CDS
CTTAGAAAGCGTGCAGAGCA+AGG	0.565769	4:-88387029	None:intergenic
TCCCATGCTAGTTGTGCATG+TGG	0.571222	4:+88389274	MsG0480023671.01.T01:three_prime_UTR
ACTACTACAAAGAAGAAATG+AGG	0.577738	4:+88386379	MsG0480023671.01.T01:exon
ATAGCAGCTTCCACAAGGAA+TGG	0.582566	4:-88388555	None:intergenic
GCAATTTCAACCCTTTGCCA+AGG	0.584888	4:+88389112	MsG0480023671.01.T01:CDS
GTCTTAGTCTATCACGATGA+GGG	0.589976	4:+88388471	MsG0480023671.01.T01:CDS
AGGGATACAAGTCCAAAAGC+TGG	0.595283	4:+88388490	MsG0480023671.01.T01:CDS
ATGTTACTGACCAGTGTCGG+TGG	0.597544	4:-88386607	None:intergenic
GGAGAAGAAAACTATTTGCA+AGG	0.599400	4:-88389254	None:intergenic
TGCAGAGCAAGGACTGAACA+TGG	0.603431	4:-88387018	None:intergenic
CCCATGCTAGTTGTGCATGT+GGG	0.605238	4:+88389275	MsG0480023671.01.T01:three_prime_UTR
ACAAGAACATGACAGATCTA+GGG	0.605770	4:+88388763	MsG0480023671.01.T01:CDS
TGTTACTGTTTCGACAAACA+CGG	0.610239	4:-88386354	None:intergenic
TATTTGGTCACCATTCCTTG+TGG	0.611002	4:+88388545	MsG0480023671.01.T01:CDS
GAATGACATCATAATGGAGA+TGG	0.612407	4:+88389199	MsG0480023671.01.T01:CDS
CCCACATGCACAACTAGCAT+GGG	0.613228	4:-88389275	None:intergenic
TGAAATTGCCTGTATGGACC+CGG	0.620052	4:-88389098	None:intergenic
AGGTTTCTCAACTTGATGCG+TGG	0.635087	4:+88386956	MsG0480023671.01.T01:CDS
ACTTGATGCGTGGTAAAGTG+TGG	0.641096	4:+88386966	MsG0480023671.01.T01:CDS
CTTGATGCGTGGTAAAGTGT+GGG	0.646603	4:+88386967	MsG0480023671.01.T01:CDS
TGTCTTAGTCTATCACGATG+AGG	0.652354	4:+88388470	MsG0480023671.01.T01:CDS
ATCGTCACTTCCAATCACAA+GGG	0.657050	4:+88388831	MsG0480023671.01.T01:CDS
TGTTACTGACCAGTGTCGGT+GGG	0.657177	4:-88386606	None:intergenic
GACATACTGAAGTTGTACGA+AGG	0.673475	4:-88388519	None:intergenic
AATGGAGAGTGGTTTAGCGG+CGG	0.675176	4:+88388894	MsG0480023671.01.T01:CDS
CTTGACTCTGATCTATACTG+TGG	0.696268	4:+88386239	MsG0480023671.01.T01:five_prime_UTR
AGAATGTTACTGACCAGTGT+CGG	0.728713	4:-88386610	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTATTTACAATATTTGA+TGG	+	Chr4:88387649-88387668	MsG0480023671.01.T01:intron	10.0%
!!!	TATAGTTTTATATTTCATTT+TGG	+	Chr4:88389396-88389415	MsG0480023671.01.T01:three_prime_UTR	10.0%
!!	AATTTAGATAAAAATAGTGA+AGG	-	Chr4:88388146-88388165	None:intergenic	15.0%
!!!	TCTTCTATTTAAAACAAAAA+TGG	-	Chr4:88388238-88388257	None:intergenic	15.0%
!!	AAAAGGATAATGATTATGAA+AGG	+	Chr4:88387844-88387863	MsG0480023671.01.T01:intron	20.0%
!!	ATAATGATTATGAAAGGTAA+TGG	+	Chr4:88387850-88387869	MsG0480023671.01.T01:intron	20.0%
!!	ATCAAAATTGCTTGAAAAAT+GGG	+	Chr4:88386861-88386880	MsG0480023671.01.T01:CDS	20.0%
!!	CATGTTTCATTTGTATAAAT+TGG	-	Chr4:88386824-88386843	None:intergenic	20.0%
!!	CGATTACATTATTATTTCAA+CGG	+	Chr4:88388668-88388687	MsG0480023671.01.T01:CDS	20.0%
!!	GATTACATTATTATTTCAAC+GGG	+	Chr4:88388669-88388688	MsG0480023671.01.T01:CDS	20.0%
!!	TAATAATGTAATCGAAGTTT+AGG	-	Chr4:88388662-88388681	None:intergenic	20.0%
!!	TCAATTAAGAACAGTTAAAA+AGG	+	Chr4:88387827-88387846	MsG0480023671.01.T01:intron	20.0%
!!	TCAATTAAGAAGAGTTAAAA+AGG	+	Chr4:88387933-88387952	MsG0480023671.01.T01:intron	20.0%
!!!	AAAAATGAAAAAGTATAGAC+TGG	+	Chr4:88387782-88387801	MsG0480023671.01.T01:intron	20.0%
!!!	AATCATATAAACTTTTGCAA+AGG	+	Chr4:88388398-88388417	MsG0480023671.01.T01:intron	20.0%
!!!	ATATTGTTTTGAACTTTGAT+TGG	+	Chr4:88387683-88387702	MsG0480023671.01.T01:intron	20.0%
!!!	GGTAAATGTGATTATTTTAA+TGG	+	Chr4:88386773-88386792	MsG0480023671.01.T01:CDS	20.0%
!!!	GTCTATACTTTTTCATTTTT+TGG	-	Chr4:88387782-88387801	None:intergenic	20.0%
!!!	TGATTATTTTAATGGTGATT+GGG	+	Chr4:88386781-88386800	MsG0480023671.01.T01:CDS	20.0%
!	AAAAGGATAATGATCATGAA+AGG	+	Chr4:88387950-88387969	MsG0480023671.01.T01:intron	25.0%
!	ATAATGATCATGAAAGGTAA+TGG	+	Chr4:88387956-88387975	MsG0480023671.01.T01:intron	25.0%
!	CATCAAAATTGCTTGAAAAA+TGG	+	Chr4:88386860-88386879	MsG0480023671.01.T01:CDS	25.0%
!	GGATAACAAAATCAGTTAAA+TGG	+	Chr4:88389230-88389249	MsG0480023671.01.T01:exon	25.0%
!	TGAGTTAGAAGAGTTTAAAA+AGG	+	Chr4:88388992-88389011	MsG0480023671.01.T01:CDS	25.0%
!	TTCCAAAACAAGTTAAACTT+GGG	+	Chr4:88386720-88386739	MsG0480023671.01.T01:CDS	25.0%
!	TTGAAGTAATTAATCAACCT+AGG	+	Chr4:88387422-88387441	MsG0480023671.01.T01:intron	25.0%
!	TTTCCAAAACAAGTTAAACT+TGG	+	Chr4:88386719-88386738	MsG0480023671.01.T01:CDS	25.0%
!!	ACTTGATGAGGTAATTTTTA+TGG	-	Chr4:88386428-88386447	None:intergenic	25.0%
!!	ATTTAAAACAAAAATGGCGA+AGG	-	Chr4:88388232-88388251	None:intergenic	25.0%
!!	TTTGTCAATTTTATGAAACC+TGG	+	Chr4:88388323-88388342	MsG0480023671.01.T01:intron	25.0%
!!!	AATTTTGATGTGATTCAATG+AGG	-	Chr4:88386850-88386869	None:intergenic	25.0%
!!!	CAATAGTTTTGTCAATAGAT+TGG	+	Chr4:88387105-88387124	MsG0480023671.01.T01:intron	25.0%
!!!	GCTATTTTTGAAGACATAAA+CGG	+	Chr4:88388573-88388592	MsG0480023671.01.T01:CDS	25.0%
!!!	GGGATTTTTACTTTTTACTT+TGG	+	Chr4:88386745-88386764	MsG0480023671.01.T01:CDS	25.0%
!!!	GTCTTTTTTACGTGTTTTTT+TGG	+	Chr4:88387213-88387232	MsG0480023671.01.T01:intron	25.0%
!!!	GTGATTATTTTAATGGTGAT+TGG	+	Chr4:88386780-88386799	MsG0480023671.01.T01:CDS	25.0%
!!!	TTTAACTTGTTTTGGAAACT+CGG	-	Chr4:88386717-88386736	None:intergenic	25.0%
	AAAACAAGTTAAACTTGGGT+TGG	+	Chr4:88386724-88386743	MsG0480023671.01.T01:CDS	30.0%
	AAACAAGTTAAACTTGGGTT+GGG	+	Chr4:88386725-88386744	MsG0480023671.01.T01:CDS	30.0%
	AAATGCATAATTGACTAGAC+CGG	-	Chr4:88388030-88388049	None:intergenic	30.0%
	ACTACTACAAAGAAGAAATG+AGG	+	Chr4:88386379-88386398	MsG0480023671.01.T01:exon	30.0%
	ACTTCAGTATGTCAGTTATT+TGG	+	Chr4:88388529-88388548	MsG0480023671.01.T01:CDS	30.0%
	AGAATAACTCAAGAATCTGT+TGG	+	Chr4:88387304-88387323	MsG0480023671.01.T01:intron	30.0%
	ATAGAATAGGTCTATACTCT+TGG	+	Chr4:88387382-88387401	MsG0480023671.01.T01:intron	30.0%
	CACAAAAGATCAGACAAAAA+AGG	-	Chr4:88387167-88387186	None:intergenic	30.0%
	CATACAAGCTGTAATAGAAT+AGG	+	Chr4:88387369-88387388	MsG0480023671.01.T01:intron	30.0%
	CATGAGAATGACACTATATT+GGG	+	Chr4:88388720-88388739	MsG0480023671.01.T01:CDS	30.0%
	CTAGCTCAATAGATAAGATA+AGG	+	Chr4:88387516-88387535	MsG0480023671.01.T01:intron	30.0%
	GAAATAGTGTTTAATTCCTG+TGG	+	Chr4:88386655-88386674	MsG0480023671.01.T01:intron	30.0%
	TGTACATGAAGAATAAACGA+GGG	-	Chr4:88388108-88388127	None:intergenic	30.0%
	TTATTATTTCAACGGGAAAG+TGG	+	Chr4:88388676-88388695	MsG0480023671.01.T01:CDS	30.0%
	TTTGTATAAATTGGACCCAA+TGG	-	Chr4:88386815-88386834	None:intergenic	30.0%
!	AACCTTTGAGGATCAAAAAT+AGG	-	Chr4:88386941-88386960	None:intergenic	30.0%
!	AACTTTAGCATTTTTGTCCT+TGG	-	Chr4:88389132-88389151	None:intergenic	30.0%
!	CTTCTTTCCTCAATTACTTT+TGG	-	Chr4:88387628-88387647	None:intergenic	30.0%
!	CTTTTGTGAATGTTTCTTTG+AGG	+	Chr4:88387179-88387198	MsG0480023671.01.T01:intron	30.0%
!	TGGAAATTAAGCTTTTGCTT+AGG	+	Chr4:88388955-88388974	MsG0480023671.01.T01:CDS	30.0%
!!	GTTCTTGTTCATTTTGAAGA+GGG	-	Chr4:88386572-88386591	None:intergenic	30.0%
!!	TGTTCTTGTTCATTTTGAAG+AGG	-	Chr4:88386573-88386592	None:intergenic	30.0%
!!!	AACCCAAGTTTAACTTGTTT+TGG	-	Chr4:88386725-88386744	None:intergenic	30.0%
!!!	AGATTTTTTGTACTGGAAGT+GGG	+	Chr4:88386895-88386914	MsG0480023671.01.T01:CDS	30.0%
!!!	TACCTATTTTTGATCCTCAA+AGG	+	Chr4:88386936-88386955	MsG0480023671.01.T01:CDS	30.0%
!!!	TTACTTTTTACTTTGGATGC+AGG	+	Chr4:88386752-88386771	MsG0480023671.01.T01:CDS	30.0%
	AAACTACCAAAGTTATGCGT+TGG	-	Chr4:88387269-88387288	None:intergenic	35.0%
	AACAAGAACATGACAGATCT+AGG	+	Chr4:88388762-88388781	MsG0480023671.01.T01:CDS	35.0%
	AACACCAACTCCAAAAGAAT+CGG	+	Chr4:88386324-88386343	MsG0480023671.01.T01:five_prime_UTR	35.0%
	ACAAGAACATGACAGATCTA+GGG	+	Chr4:88388763-88388782	MsG0480023671.01.T01:CDS	35.0%
	AGAATATAGCACCTGAGAAT+CGG	+	Chr4:88387559-88387578	MsG0480023671.01.T01:intron	35.0%
	ATAGGTAACTCACAATCTCT+AGG	-	Chr4:88386923-88386942	None:intergenic	35.0%
	ATCAATTCAGTCCAAACAAG+TGG	-	Chr4:88388358-88388377	None:intergenic	35.0%
	ATCAGCTCCAAAAGTAATTG+AGG	+	Chr4:88387618-88387637	MsG0480023671.01.T01:intron	35.0%
	CAAAATCAAACCCTTGTGAT+TGG	-	Chr4:88388844-88388863	None:intergenic	35.0%
	CAGTACAAAAAATCTCTGTC+TGG	-	Chr4:88386890-88386909	None:intergenic	35.0%
	CCATGAGAATGACACTATAT+TGG	+	Chr4:88388719-88388738	MsG0480023671.01.T01:CDS	35.0%
	GACAACAACGATGAATACAA+TGG	-	Chr4:88387086-88387105	None:intergenic	35.0%
	GGAGAAGAAAACTATTTGCA+AGG	-	Chr4:88389257-88389276	None:intergenic	35.0%
	GGTAGTTTATTTATCGAGTC+TGG	+	Chr4:88387281-88387300	MsG0480023671.01.T01:intron	35.0%
	GGTCTCAATGTTCAATTAGT+CGG	+	Chr4:88386676-88386695	MsG0480023671.01.T01:intron	35.0%
	GTGTACATGAAGAATAAACG+AGG	-	Chr4:88388109-88388128	None:intergenic	35.0%
	TAATTGAACATTGAGACCAC+AGG	-	Chr4:88386674-88386693	None:intergenic	35.0%
	TCAGAAAGAGAAGAAGTTTG+AGG	-	Chr4:88386537-88386556	None:intergenic	35.0%
	TCCATCTCACCTTCTTTAAT+CGG	-	Chr4:88388939-88388958	None:intergenic	35.0%
	TCGACAAACTGGATAGTAAA+TGG	+	Chr4:88388625-88388644	MsG0480023671.01.T01:CDS	35.0%
	TGTTACTGTTTCGACAAACA+CGG	-	Chr4:88386357-88386376	None:intergenic	35.0%
	TTCAGACTGATTGTTTGCAT+TGG	+	Chr4:88389150-88389169	MsG0480023671.01.T01:CDS	35.0%
!	AAAGAGAAGAAGTTTGAGGT+GGG	-	Chr4:88386533-88386552	None:intergenic	35.0%
!	ACCACTCTCCATTTTCAAAA+TGG	-	Chr4:88388887-88388906	None:intergenic	35.0%
!	ATAATGGAGATGGTTGTCAA+TGG	+	Chr4:88389209-88389228	MsG0480023671.01.T01:CDS	35.0%
!	ATTTTCAAAATGGTCAGGTG+TGG	-	Chr4:88388877-88388896	None:intergenic	35.0%
!	CCAATATAGTGTCATTCTCA+TGG	-	Chr4:88388722-88388741	None:intergenic	35.0%
!	GAATGACATCATAATGGAGA+TGG	+	Chr4:88389199-88389218	MsG0480023671.01.T01:CDS	35.0%
!	GCGTCTAAAGCTTCAAAAAA+TGG	+	Chr4:88389017-88389036	MsG0480023671.01.T01:CDS	35.0%
!	GGATAGATTGAGAATGGTTT+TGG	-	Chr4:88386298-88386317	None:intergenic	35.0%
!	TAAATTGGACCCAATGGATT+TGG	-	Chr4:88386809-88386828	None:intergenic	35.0%
!	TCTCCATTTTCAAAATGGTC+AGG	-	Chr4:88388882-88388901	None:intergenic	35.0%
!!	ACAAGGGTTTGATTTTGTTC+AGG	+	Chr4:88388847-88388866	MsG0480023671.01.T01:CDS	35.0%
!!	ACACCTGACCATTTTGAAAA+TGG	+	Chr4:88388876-88388895	MsG0480023671.01.T01:CDS	35.0%
!!	ACCATTTTGAAAATGGAGAG+TGG	+	Chr4:88388883-88388902	MsG0480023671.01.T01:CDS	35.0%
!!	ATCAAGTTGAGAAACCTTTG+AGG	-	Chr4:88386953-88386972	None:intergenic	35.0%
!!!	AGATTGAGAATGGTTTTGGT+TGG	-	Chr4:88386294-88386313	None:intergenic	35.0%
!!!	ATTGAGAATGGTTTTGGTTG+GGG	-	Chr4:88386292-88386311	None:intergenic	35.0%
!!!	CAGACAGAGATTTTTTGTAC+TGG	+	Chr4:88386888-88386907	MsG0480023671.01.T01:CDS	35.0%
!!!	CTTCAACTATTTTGACCTTC+AGG	+	Chr4:88388437-88388456	MsG0480023671.01.T01:intron	35.0%
!!!	GAGATTTTTTGTACTGGAAG+TGG	+	Chr4:88386894-88386913	MsG0480023671.01.T01:CDS	35.0%
!!!	GATTGAGAATGGTTTTGGTT+GGG	-	Chr4:88386293-88386312	None:intergenic	35.0%
!!!	TTTTCAAGTTTTGCCAGTCT+AGG	-	Chr4:88387798-88387817	None:intergenic	35.0%
	AACAAGTGGTCAAAAAGTCC+AGG	-	Chr4:88388344-88388363	None:intergenic	40.0%
	AAGGGTTGAAATTGCCTGTA+TGG	-	Chr4:88389107-88389126	None:intergenic	40.0%
	AGAACTGAGCCGATTAAAGA+AGG	+	Chr4:88388927-88388946	MsG0480023671.01.T01:CDS	40.0%
	AGAATGTTACTGACCAGTGT+CGG	-	Chr4:88386613-88386632	None:intergenic	40.0%
	ATCGTCACTTCCAATCACAA+GGG	+	Chr4:88388831-88388850	MsG0480023671.01.T01:CDS	40.0%
	ATGTCATTCCAGGAGTCTAT+AGG	-	Chr4:88389188-88389207	None:intergenic	40.0%
	CAAAAATAGCAGCTTCCACA+AGG	-	Chr4:88388563-88388582	None:intergenic	40.0%
	CTCCATTATGATGTCATTCC+AGG	-	Chr4:88389198-88389217	None:intergenic	40.0%
	CTCCTGGAATGACATCATAA+TGG	+	Chr4:88389193-88389212	MsG0480023671.01.T01:CDS	40.0%
	CTGAACATGGTTTCGAGAAA+TGG	-	Chr4:88387008-88387027	None:intergenic	40.0%
	CTTGACTCTGATCTATACTG+TGG	+	Chr4:88386239-88386258	MsG0480023671.01.T01:five_prime_UTR	40.0%
	GAAAATGGAGAGTGGTTTAG+CGG	+	Chr4:88388891-88388910	MsG0480023671.01.T01:CDS	40.0%
	GAAAGAGAAGAAGTTTGAGG+TGG	-	Chr4:88386534-88386553	None:intergenic	40.0%
	GACATACTGAAGTTGTACGA+AGG	-	Chr4:88388522-88388541	None:intergenic	40.0%
	GAGTGAGAAGTAACTTGATG+AGG	-	Chr4:88386440-88386459	None:intergenic	40.0%
	GATTGGGTACCAAATCCATT+GGG	+	Chr4:88386797-88386816	MsG0480023671.01.T01:CDS	40.0%
	GCTTACGGATAGATTGAGAA+TGG	-	Chr4:88386304-88386323	None:intergenic	40.0%
	GTCTTAGTCTATCACGATGA+GGG	+	Chr4:88388471-88388490	MsG0480023671.01.T01:CDS	40.0%
	GTTGGAACCAAAACAAGTTC+CGG	-	Chr4:88387251-88387270	None:intergenic	40.0%
	GTTTGGACTGAATTGATGCA+TGG	+	Chr4:88388361-88388380	MsG0480023671.01.T01:intron	40.0%
	TACGTGTATGGACTTGTAAC+TGG	-	Chr4:88387998-88388017	None:intergenic	40.0%
	TATTTGGTCACCATTCCTTG+TGG	+	Chr4:88388545-88388564	MsG0480023671.01.T01:CDS	40.0%
	TCAACCTAGGATGAAAAGAG+TGG	+	Chr4:88387435-88387454	MsG0480023671.01.T01:intron	40.0%
	TGAGCTATATCTCGACAAAC+TGG	+	Chr4:88388614-88388633	MsG0480023671.01.T01:CDS	40.0%
	TGATTGGGTACCAAATCCAT+TGG	+	Chr4:88386796-88386815	MsG0480023671.01.T01:CDS	40.0%
	TGTCTTAGTCTATCACGATG+AGG	+	Chr4:88388470-88388489	MsG0480023671.01.T01:CDS	40.0%
	TTGGTTCCAACGCATAACTT+TGG	+	Chr4:88387260-88387279	MsG0480023671.01.T01:intron	40.0%
	TTTGAAGAGGGAGTTGTTGA+AGG	-	Chr4:88386560-88386579	None:intergenic	40.0%
!	AAGAGAAGAAGTTTGAGGTG+GGG	-	Chr4:88386532-88386551	None:intergenic	40.0%
!	AGCATTTTTGTCCTTGGCAA+AGG	-	Chr4:88389126-88389145	None:intergenic	40.0%
!	GCATTTTTGTCCTTGGCAAA+GGG	-	Chr4:88389125-88389144	None:intergenic	40.0%
!	GGACTTTTTGACCACTTGTT+TGG	+	Chr4:88388344-88388363	MsG0480023671.01.T01:intron	40.0%
!	TTCTCCACTCTTTTCATCCT+AGG	-	Chr4:88387442-88387461	None:intergenic	40.0%
!!	AGACAGCTTTTTCTACCTGA+AGG	-	Chr4:88388455-88388474	None:intergenic	40.0%
!!	TTTGGAGTTGGTGTTGCTTA+CGG	-	Chr4:88386319-88386338	None:intergenic	40.0%
!!!	ACAAGAACTCTGGGATTTTG+AGG	+	Chr4:88387587-88387606	MsG0480023671.01.T01:intron	40.0%
!!!	CGGAAATACACCGATTCTTT+TGG	-	Chr4:88386337-88386356	None:intergenic	40.0%
!!!	TACACCGATTCTTTTGGAGT+TGG	-	Chr4:88386331-88386350	None:intergenic	40.0%
!!!	TTTCGCTTTTGAGACCAGAT+GGG	+	Chr4:88389072-88389091	MsG0480023671.01.T01:CDS	40.0%
	ACTTGATGCGTGGTAAAGTG+TGG	+	Chr4:88386966-88386985	MsG0480023671.01.T01:CDS	45.0%
	AGGGATACAAGTCCAAAAGC+TGG	+	Chr4:88388490-88388509	MsG0480023671.01.T01:CDS	45.0%
	AGGTTTCTCAACTTGATGCG+TGG	+	Chr4:88386956-88386975	MsG0480023671.01.T01:CDS	45.0%
	ATAGCACCTGAGAATCGGAT+TGG	+	Chr4:88387564-88387583	MsG0480023671.01.T01:intron	45.0%
	ATAGCAGCTTCCACAAGGAA+TGG	-	Chr4:88388558-88388577	None:intergenic	45.0%
	CATACACGTATAGTTGCCAC+CGG	+	Chr4:88388008-88388027	MsG0480023671.01.T01:intron	45.0%
	CATCGTCACTTCCAATCACA+AGG	+	Chr4:88388830-88388849	MsG0480023671.01.T01:CDS	45.0%
	CTTGATGCGTGGTAAAGTGT+GGG	+	Chr4:88386967-88386986	MsG0480023671.01.T01:CDS	45.0%
	GACACTATATTGGGCTGTCA+CGG	+	Chr4:88388729-88388748	MsG0480023671.01.T01:CDS	45.0%
	GCAATTTCAACCCTTTGCCA+AGG	+	Chr4:88389112-88389131	MsG0480023671.01.T01:CDS	45.0%
	GCCGATTAAAGAAGGTGAGA+TGG	+	Chr4:88388935-88388954	MsG0480023671.01.T01:CDS	45.0%
	GTAATGGCTTGAACAAGCTG+AGG	+	Chr4:88387866-88387885	MsG0480023671.01.T01:intron	45.0%
	TCTGGTCTCAAAAGCGAAAG+TGG	-	Chr4:88389071-88389090	None:intergenic	45.0%
	TCTTGTCCAATCCGATTCTC+AGG	-	Chr4:88387573-88387592	None:intergenic	45.0%
	TGAAATTGCCTGTATGGACC+CGG	-	Chr4:88389101-88389120	None:intergenic	45.0%
	TGCATAATTGACTAGACCGG+TGG	-	Chr4:88388027-88388046	None:intergenic	45.0%
!	AAGAAGTTTGAGGTGGGGTT+TGG	-	Chr4:88386527-88386546	None:intergenic	45.0%
!	AGAAGTTTGAGGTGGGGTTT+GGG	-	Chr4:88386526-88386545	None:intergenic	45.0%
!	ATCGGATTGGACAAGAACTC+TGG	+	Chr4:88387577-88387596	MsG0480023671.01.T01:intron	45.0%
!	TCGGATTGGACAAGAACTCT+GGG	+	Chr4:88387578-88387597	MsG0480023671.01.T01:intron	45.0%
!!!	CTTTCGCTTTTGAGACCAGA+TGG	+	Chr4:88389071-88389090	MsG0480023671.01.T01:CDS	45.0%
!!!	TTTTTGGCTGATGCGTTGAC+CGG	+	Chr4:88387229-88387248	MsG0480023671.01.T01:intron	45.0%
	AATGGAGAGTGGTTTAGCGG+CGG	+	Chr4:88388894-88388913	MsG0480023671.01.T01:CDS	50.0%
	ACCCACATGCACAACTAGCA+TGG	-	Chr4:88389279-88389298	None:intergenic	50.0%
	CCCACATGCACAACTAGCAT+GGG	-	Chr4:88389278-88389297	None:intergenic	50.0%
	CCCATGCTAGTTGTGCATGT+GGG	+	Chr4:88389275-88389294	MsG0480023671.01.T01:three_prime_UTR	50.0%
	CGGTGGCAACTATACGTGTA+TGG	-	Chr4:88388010-88388029	None:intergenic	50.0%
	CTTGCTCTGCACGCTTTCTA+AGG	+	Chr4:88387030-88387049	MsG0480023671.01.T01:CDS	50.0%
	GCCAGTTACAAGTCCTAGAC+TGG	+	Chr4:88387888-88387907	MsG0480023671.01.T01:intron	50.0%
	GGTAAAGTGTGGGCGCTTAT+TGG	+	Chr4:88386977-88386996	MsG0480023671.01.T01:CDS	50.0%
	TCCCATGCTAGTTGTGCATG+TGG	+	Chr4:88389274-88389293	MsG0480023671.01.T01:three_prime_UTR	50.0%
	TGCAGAGCAAGGACTGAACA+TGG	-	Chr4:88387021-88387040	None:intergenic	50.0%
!	ATGTTACTGACCAGTGTCGG+TGG	-	Chr4:88386610-88386629	None:intergenic	50.0%
!	CTTAGAAAGCGTGCAGAGCA+AGG	-	Chr4:88387032-88387051	None:intergenic	50.0%
!	GAAGTTTGAGGTGGGGTTTG+GGG	-	Chr4:88386525-88386544	None:intergenic	50.0%
!	GCCAGTCTAGGACTTGTAAC+TGG	-	Chr4:88387892-88387911	None:intergenic	50.0%
!	GTTTGCATTGGTGCTTGCCT+GGG	+	Chr4:88389162-88389181	MsG0480023671.01.T01:CDS	50.0%
!	GTTTGGGGTTCAGTGAGAGT+GGG	-	Chr4:88386510-88386529	None:intergenic	50.0%
!	TGTTTGCATTGGTGCTTGCC+TGG	+	Chr4:88389161-88389180	MsG0480023671.01.T01:CDS	50.0%
!	TTTGAGACCAGATGGGCATC+CGG	+	Chr4:88389079-88389098	MsG0480023671.01.T01:CDS	50.0%
!!	GCGTTGACCGGAACTTGTTT+TGG	+	Chr4:88387241-88387260	MsG0480023671.01.T01:intron	50.0%
!!	TGTTACTGACCAGTGTCGGT+GGG	-	Chr4:88386609-88386628	None:intergenic	50.0%
!!!	CGAAGGAAAGTGCCAGCTTT+TGG	-	Chr4:88388505-88388524	None:intergenic	50.0%
	TTCCAGGAGTCTATAGGCCC+AGG	-	Chr4:88389182-88389201	None:intergenic	55.0%
	TTGAGACCAGATGGGCATCC+GGG	+	Chr4:88389080-88389099	MsG0480023671.01.T01:CDS	55.0%
!	GGTTTGGGGTTCAGTGAGAG+TGG	-	Chr4:88386511-88386530	None:intergenic	55.0%
	ATGGGCATCCGGGTCCATAC+AGG	+	Chr4:88389090-88389109	MsG0480023671.01.T01:CDS	60.0%
	CAACTCTCTCCCACCGACAC+TGG	+	Chr4:88386597-88386616	MsG0480023671.01.T01:CDS	60.0%
	TATGGACCCGGATGCCCATC+TGG	-	Chr4:88389089-88389108	None:intergenic	60.0%
	TGCCTGGGCCTATAGACTCC+TGG	+	Chr4:88389177-88389196	MsG0480023671.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	88386231	88389429	88386231	ID=MsG0480023671.01;Name=MsG0480023671.01
Chr4	mRNA	88386231	88389429	88386231	ID=MsG0480023671.01.T01;Parent=MsG0480023671.01;Name=MsG0480023671.01.T01;_AED=0.49;_eAED=0.49;_QI=165\|0.5\|0.66\|1\|1\|1\|3\|194\|446
Chr4	exon	88386231	88386618	88386231	ID=MsG0480023671.01.T01:exon:12339;Parent=MsG0480023671.01.T01
Chr4	exon	88386711	88387051	88386711	ID=MsG0480023671.01.T01:exon:12340;Parent=MsG0480023671.01.T01
Chr4	exon	88388459	88389429	88388459	ID=MsG0480023671.01.T01:exon:12341;Parent=MsG0480023671.01.T01
Chr4	five_prime_UTR	88386231	88386395	88386231	ID=MsG0480023671.01.T01:five_prime_utr;Parent=MsG0480023671.01.T01
Chr4	CDS	88386396	88386618	88386396	ID=MsG0480023671.01.T01:cds;Parent=MsG0480023671.01.T01
Chr4	CDS	88386711	88387051	88386711	ID=MsG0480023671.01.T01:cds;Parent=MsG0480023671.01.T01
Chr4	CDS	88388459	88389235	88388459	ID=MsG0480023671.01.T01:cds;Parent=MsG0480023671.01.T01
Chr4	three_prime_UTR	88389236	88389429	88389236	ID=MsG0480023671.01.T01:three_prime_utr;Parent=MsG0480023671.01.T01

Gene Sequence

>MsG0480023671.01.T01

ATGAGGATCGATTCTTCTTTCAATTTCAACCATAAAAATTACCTCATCAAGTTACTTCTCACTCTTTTCTTCTCTGTACTCGCTTTTCGTCTTCTCTTCTTTCAATCTCTTCCCACTCTCACTGAACCCCAAACCCCACCTCAAACTTCTTCTCTTTCTGACCTTCAACAACTCCCTCTTCAAAATGAACAAGAACAAGATCAACTCTCTCCCACCGACACTGATACCGAGTTTCCAAAACAAGTTAAACTTGGGTTGGGATTTTTACTTTTTACTTTGGATGCAGGTAAATGTGATTATTTTAATGGTGATTGGGTACCAAATCCATTGGGTCCAATTTATACAAATGAAACATGTGACCTCATTGAATCACATCAAAATTGCTTGAAAAATGGGAGACCAGACAGAGATTTTTTGTACTGGAAGTGGGCTCCTAGAGATTGTGAGTTACCTATTTTTGATCCTCAAAGGTTTCTCAACTTGATGCGTGGTAAAGTGTGGGCGCTTATTGGCGATTCCATTTCTCGAAACCATGTTCAGTCCTTGCTCTGCACGCTTTCTAAGGTAGAAAAAGCTGTCTTAGTCTATCACGATGAGGGATACAAGTCCAAAAGCTGGCACTTTCCTTCGTACAACTTCAGTATGTCAGTTATTTGGTCACCATTCCTTGTGGAAGCTGCTATTTTTGAAGACATAAACGGCGTTTCAAGTTCTGAAGTTGAGCTATATCTCGACAAACTGGATAGTAAATGGACAGATCAGTACCTAAACTTCGATTACATTATTATTTCAACGGGAAAGTGGTTTGTCAAATCTGCAATCTACCATGAGAATGACACTATATTGGGCTGTCACGGCTGTTCTAGTAACAAGAACATGACAGATCTAGGGTTTGACTTTGCATATCGCAAAGTCTTGAAAAATGTCATGAACTTCATCGTCACTTCCAATCACAAGGGTTTGATTTTGTTCAGGACATCCACACCTGACCATTTTGAAAATGGAGAGTGGTTTAGCGGCGGAACGTGCAACAGAACTGAGCCGATTAAAGAAGGTGAGATGGAAATTAAGCTTTTGCTTAGGATTCTTCGCGACATTGAGTTAGAAGAGTTTAAAAAGGCAGCGTCTAAAGCTTCAAAAAATGGAGTGAATCTCAAGCTTGCTGATTTTGCACCACTTTCGCTTTTGAGACCAGATGGGCATCCGGGTCCATACAGGCAATTTCAACCCTTTGCCAAGGACAAAAATGCTAAAGTTCAGACTGATTGTTTGCATTGGTGCTTGCCTGGGCCTATAGACTCCTGGAATGACATCATAATGGAGATGGTTGTCAATGGATAA

Protein sequence

>MsG0480023671.01.T01

MRIDSSFNFNHKNYLIKLLLTLFFSVLAFRLLFFQSLPTLTEPQTPPQTSSLSDLQQLPLQNEQEQDQLSPTDTDTEFPKQVKLGLGFLLFTLDAGKCDYFNGDWVPNPLGPIYTNETCDLIESHQNCLKNGRPDRDFLYWKWAPRDCELPIFDPQRFLNLMRGKVWALIGDSISRNHVQSLLCTLSKVEKAVLVYHDEGYKSKSWHFPSYNFSMSVIWSPFLVEAAIFEDINGVSSSEVELYLDKLDSKWTDQYLNFDYIIISTGKWFVKSAIYHENDTILGCHGCSSNKNMTDLGFDFAYRKVLKNVMNFIVTSNHKGLILFRTSTPDHFENGEWFSGGTCNRTEPIKEGEMEIKLLLRILRDIELEEFKKAASKASKNGVNLKLADFAPLSLLRPDGHPGPYRQFQPFAKDKNAKVQTDCLHWCLPGPIDSWNDIIMEMVVNG*