AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039702.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039702.01.T01 MTR_7g077800 92.035 226 16 1 1 226 1 224 3.95e-145 417
MsG0780039702.01.T01 MTR_7g077800 51.786 112 29 6 225 313 284 393 7.95e-17 82.0
MsG0780039702.01.T01 MTR_7g077800 92.035 226 16 1 1 226 1 224 1.22e-143 416
MsG0780039702.01.T01 MTR_7g077800 85.366 41 4 1 225 263 284 324 7.34e-13 70.1
MsG0780039702.01.T01 MTR_7g077800 92.035 226 16 1 1 226 1 224 4.50e-142 415
MsG0780039702.01.T01 MTR_7g077800 88.095 42 5 0 353 394 496 537 2.04e-18 87.4
MsG0780039702.01.T01 MTR_7g077800 85.366 41 4 1 225 263 284 324 1.08e-12 69.7
MsG0780039702.01.T01 MTR_8g030680 68.482 257 68 4 7 262 15 259 4.25e-110 333
MsG0780039702.01.T01 MTR_6g463340 61.836 207 75 3 21 226 27 230 4.42e-78 251
MsG0780039702.01.T01 MTR_8g030680 66.111 180 53 3 84 262 1 173 9.92e-67 219
MsG0780039702.01.T01 MTR_7g405780 43.077 195 109 1 22 216 30 222 3.24e-41 151
MsG0780039702.01.T01 MTR_7g405780 43.077 195 109 1 22 216 30 222 3.43e-41 151
MsG0780039702.01.T01 MTR_7g405780 43.077 195 109 1 22 216 30 222 1.33e-40 150
MsG0780039702.01.T01 MTR_7g405780 43.077 195 109 1 22 216 30 222 1.78e-40 150
MsG0780039702.01.T01 MTR_6g463340 61.290 124 45 2 104 226 1 122 1.33e-37 141
MsG0780039702.01.T01 MTR_7g077800 80.682 88 15 1 139 226 1 86 2.28e-35 134
MsG0780039702.01.T01 MTR_7g077800 88.095 42 5 0 353 394 358 399 9.27e-19 87.8
MsG0780039702.01.T01 MTR_7g077800 85.366 41 4 1 225 263 146 186 8.85e-13 69.7
MsG0780039702.01.T01 MTR_1g116953 33.684 190 120 3 34 221 27 212 1.61e-24 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039702.01.T01 AT1G01650 58.984 256 98 3 8 262 12 261 4.31e-93 290
MsG0780039702.01.T01 AT1G63690 50.825 303 86 4 22 263 27 327 2.22e-86 272
MsG0780039702.01.T01 AT1G63690 50.825 303 86 4 22 263 27 327 2.39e-86 272
MsG0780039702.01.T01 AT1G05820 40.816 196 111 3 28 221 30 222 2.53e-32 126
MsG0780039702.01.T01 AT1G05820 40.816 196 111 3 28 221 30 222 1.22e-31 125
MsG0780039702.01.T01 AT1G05820 40.816 196 111 3 28 221 30 222 1.68e-31 125
MsG0780039702.01.T01 AT2G43070 38.350 206 122 3 22 225 28 230 1.99e-31 125
MsG0780039702.01.T01 AT2G43070 38.350 206 122 3 22 225 28 230 2.04e-31 125
MsG0780039702.01.T01 AT2G43070 38.350 206 122 3 22 225 87 289 3.09e-31 125
MsG0780039702.01.T01 AT2G43070 38.350 206 122 3 22 225 87 289 3.25e-31 125
MsG0780039702.01.T01 AT1G01650 48.000 125 58 3 139 262 1 119 1.55e-22 98.6
MsG0780039702.01.T01 AT1G01650 48.000 125 58 3 139 262 1 119 1.55e-22 98.6
MsG0780039702.01.T01 AT1G01650 48.000 125 58 3 139 262 1 119 1.55e-22 98.6

Find 96 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCTTGAGGTTTGGTATT+TGG 0.124495 7:-67813820 None:intergenic
CCATTCTCTGTGCTTCTTAC+TGG 0.166120 7:+67812473 MsG0780039702.01.T01:CDS
CTTCTTCTTCTCTGTGTTCA+TGG 0.169898 7:+67809813 MsG0780039702.01.T01:CDS
TCCACACCATCAATTGAAAT+TGG 0.185349 7:-67811500 None:intergenic
CTTCTTTCCCAATGACAAAA+AGG 0.201334 7:-67815109 None:intergenic
ACTCTTTCTGGCTATGGATA+TGG 0.224909 7:+67813867 MsG0780039702.01.T01:CDS
TGAGCAAGAGAAGCTATTAA+AGG 0.254085 7:+67812525 MsG0780039702.01.T01:CDS
ATACATAGCTTTGAATTTGA+TGG 0.290429 7:+67814653 MsG0780039702.01.T01:CDS
AATGAAACCGATATTGATAT+TGG 0.297635 7:+67812152 MsG0780039702.01.T01:CDS
AAAGTTCCAATTTCAATTGA+TGG 0.322977 7:+67811494 MsG0780039702.01.T01:CDS
TTGTCACATCCAGGTTTCTT+AGG 0.323154 7:-67809889 None:intergenic
AACTAGAATACCTTATTCTT+AGG 0.323199 7:-67811638 None:intergenic
CTTTAGCGTTATTTATAATC+AGG 0.343087 7:-67811887 None:intergenic
GCTCACGGGCGAGATCATTT+TGG 0.348166 7:+67811797 MsG0780039702.01.T01:intron
GGGTATCGCTTTGATAATTA+CGG 0.355376 7:+67813784 MsG0780039702.01.T01:intron
TTGTAGCAAACCTAAGAATA+AGG 0.355750 7:+67811628 MsG0780039702.01.T01:CDS
GTCGGTGTTGGTGCAAGATT+TGG 0.369570 7:+67811536 MsG0780039702.01.T01:CDS
CGGCAATGGCAACTCTAGTA+TGG 0.378558 7:-67811592 None:intergenic
TTCTTCAGCTATATTTGCCT+TGG 0.386977 7:-67811847 None:intergenic
AGGTATTCCAATATCAATAT+CGG 0.409099 7:-67812159 None:intergenic
ACGATGAGTGCCTATGGTTT+AGG 0.409248 7:+67814516 MsG0780039702.01.T01:CDS
CCAAAGTACAAACAGATTCA+TGG 0.410036 7:-67815417 None:intergenic
ATGTGACAACAACTTTGTTC+TGG 0.416582 7:+67809903 MsG0780039702.01.T01:CDS
ATAATCATCACCTTGAGGTT+TGG 0.432877 7:-67813827 None:intergenic
GGGACTGCAAACTTGCTTAG+TGG 0.435026 7:+67813301 MsG0780039702.01.T01:intron
TCCAATTTCAATTGATGGTG+TGG 0.445372 7:+67811499 MsG0780039702.01.T01:CDS
CCATGAATCTGTTTGTACTT+TGG 0.451169 7:+67815417 MsG0780039702.01.T01:three_prime_UTR
CTCCCGCGGAATAGTATTGT+AGG 0.456964 7:+67815223 MsG0780039702.01.T01:three_prime_UTR
GTGCTTCTTACTGGTCTGCC+TGG 0.461814 7:+67812482 MsG0780039702.01.T01:CDS
GGAGACTTATAACAAATCAT+AGG 0.463251 7:+67815258 MsG0780039702.01.T01:three_prime_UTR
AACACCCTCTCTGGCAGTCC+AGG 0.466046 7:-67812500 None:intergenic
CCCTCTTGACTGTTAGATGT+TGG 0.473230 7:+67815389 MsG0780039702.01.T01:three_prime_UTR
ACAAAGTTGTTGTCACATCC+AGG 0.490168 7:-67809898 None:intergenic
TAGCTTTGAATTTGATGGAT+GGG 0.490494 7:+67814658 MsG0780039702.01.T01:CDS
GCGGGAGATTACTCGTCTAC+TGG 0.490969 7:-67815207 None:intergenic
TTAGGTTTGCTACAACAGTC+AGG 0.492193 7:-67811620 None:intergenic
TGCAAGATTTGGACCTACAT+TGG 0.494196 7:+67811547 MsG0780039702.01.T01:CDS
TGCAAGACACAAACCAGATT+AGG 0.497235 7:-67812345 None:intergenic
TTGCTCAATAACACCCTCTC+TGG 0.497863 7:-67812509 None:intergenic
AACACAGAGAAGAAGAAGAT+AGG 0.498115 7:-67809808 None:intergenic
ACCTGCTGTCATGCTTCCAC+TGG 0.500327 7:+67812178 MsG0780039702.01.T01:CDS
ATGTGAAACAGCACCGAAGA+AGG 0.501888 7:-67813521 None:intergenic
TCTTGACTGTTAGATGTTGG+AGG 0.506148 7:+67815392 MsG0780039702.01.T01:three_prime_UTR
TATGTGAAAGTACCCTTCTT+CGG 0.508554 7:+67813508 MsG0780039702.01.T01:CDS
CTTGAAATTTGTTAGCTCAC+GGG 0.508693 7:+67811783 MsG0780039702.01.T01:intron
AAGAAGATAGGTGTAAAAGA+AGG 0.514055 7:-67809796 None:intergenic
CTGATTATAAATAACGCTAA+AGG 0.517532 7:+67811888 MsG0780039702.01.T01:CDS
GTCATGCTTCCACTGGATGC+CGG 0.519867 7:+67812185 MsG0780039702.01.T01:CDS
TTGTGGACGATGAGTGCCTA+TGG 0.521690 7:+67814510 MsG0780039702.01.T01:CDS
GGGACTATATACAGCAAAGC+TGG 0.523296 7:-67814690 None:intergenic
CCAGTAAGAAGCACAGAGAA+TGG 0.528439 7:-67812473 None:intergenic
TCCAACATCTAACAGTCAAG+AGG 0.532187 7:-67815390 None:intergenic
GCAAATATAGCTGAAGAAGC+TGG 0.537504 7:+67811852 MsG0780039702.01.T01:CDS
GTGCCTTGTACAATATCGTT+AGG 0.539714 7:-67815334 None:intergenic
TCTGCCTGGACTGCCAGAGA+GGG 0.540666 7:+67812496 MsG0780039702.01.T01:CDS
TTCGAGCAGGATACTTCTTG+TGG 0.550885 7:+67814493 MsG0780039702.01.T01:CDS
AGTATTGCTCCTAAGAAACC+TGG 0.554160 7:+67809880 MsG0780039702.01.T01:CDS
AGCGTTATTTATAATCAGGA+TGG 0.554823 7:-67811883 None:intergenic
CAGCCTAACGATATTGTACA+AGG 0.555015 7:+67815331 MsG0780039702.01.T01:three_prime_UTR
GTCTGCCTGGACTGCCAGAG+AGG 0.555701 7:+67812495 MsG0780039702.01.T01:CDS
TCCTCTTTGATGTGAGGGCA+AGG 0.564220 7:-67815177 None:intergenic
ATAGCTTTGAATTTGATGGA+TGG 0.564608 7:+67814657 MsG0780039702.01.T01:CDS
CAGCGAATGCTATGCAGAAG+GGG 0.568313 7:-67813559 None:intergenic
TCCAGTGGAAGCATGACAGC+AGG 0.569868 7:-67812179 None:intergenic
AACCTACAATACTATTCCGC+GGG 0.570740 7:-67815225 None:intergenic
CTATAGCATACCTAAACCAT+AGG 0.572085 7:-67814526 None:intergenic
TCAATTGATGGTGTGGAAAG+CGG 0.573126 7:+67811506 MsG0780039702.01.T01:CDS
AGCGGCGAGTATGTCGGTGT+TGG 0.576766 7:+67811524 MsG0780039702.01.T01:CDS
GTATATAGTCCCATTTACAC+TGG 0.578118 7:+67814701 MsG0780039702.01.T01:CDS
ACAGCGAATGCTATGCAGAA+GGG 0.578393 7:-67813560 None:intergenic
TGATGATCCTCTTTGATGTG+AGG 0.582482 7:-67815183 None:intergenic
AAGGCTTCACCGGCATCCAG+TGG 0.588506 7:-67812194 None:intergenic
GCGAAGAGGAACCTTCGAGC+AGG 0.590157 7:+67814480 MsG0780039702.01.T01:intron
TATATACAAAACAAGTCCAC+AGG 0.595990 7:+67812224 MsG0780039702.01.T01:CDS
CACAGCGAATGCTATGCAGA+AGG 0.597296 7:-67813561 None:intergenic
TTGAATTTGATGGATGGGCA+TGG 0.598006 7:+67814663 MsG0780039702.01.T01:CDS
TTGTCATTGGGAAAGAAGAG+AGG 0.601284 7:+67815114 MsG0780039702.01.T01:CDS
TTTGAATAATCATCACCTTG+AGG 0.602218 7:-67813832 None:intergenic
CCAACATCTAACAGTCAAGA+GGG 0.606250 7:-67815389 None:intergenic
TTGTGAAACTACATTGTCCT+CGG 0.612612 7:-67811824 None:intergenic
TGTCCAAATACCAAACCTCA+AGG 0.614521 7:+67813817 MsG0780039702.01.T01:CDS
GATGATCCTCTTTGATGTGA+GGG 0.616637 7:-67815182 None:intergenic
AAACCTACAATACTATTCCG+CGG 0.619560 7:-67815226 None:intergenic
TGTGAAACAGCACCGAAGAA+GGG 0.620570 7:-67813520 None:intergenic
GCTACAACAGTCAGGAGGGT+CGG 0.621755 7:-67811612 None:intergenic
ACAGTCAGGAGGGTCGGCAA+TGG 0.630961 7:-67811606 None:intergenic
GTTTGCTACAACAGTCAGGA+GGG 0.632295 7:-67811616 None:intergenic
GTGGAAAGCGGCGAGTATGT+CGG 0.632476 7:+67811518 MsG0780039702.01.T01:CDS
AGCGAATGCTATGCAGAAGG+GGG 0.647388 7:-67813558 None:intergenic
ACAAGAAGTATCCTGCTCGA+AGG 0.648586 7:-67814491 None:intergenic
GGTTTGCTACAACAGTCAGG+AGG 0.652355 7:-67811617 None:intergenic
GCCTTGCCCTCACATCAAAG+AGG 0.653911 7:+67815176 MsG0780039702.01.T01:CDS
TCAAAGCTATGTATGTGACA+AGG 0.659484 7:-67814644 None:intergenic
ACAATGTAGTTTCACAACCA+AGG 0.675341 7:+67811830 MsG0780039702.01.T01:CDS
CTTCTGCATAGCATTCGCTG+TGG 0.687281 7:+67813562 MsG0780039702.01.T01:CDS
AGTAGACGAGTAATCTCCCG+CGG 0.729711 7:+67815209 MsG0780039702.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGATATATAGAAATTTA+TGG + Chr7:67813722-67813741 MsG0780039702.01.T01:intron 10.0%
!! ACTTTCTAATAGTTAATAAA+GGG - Chr7:67810608-67810627 None:intergenic 15.0%
!! ATAACAAATCAAAAAAATAG+CGG + Chr7:67814806-67814825 MsG0780039702.01.T01:intron 15.0%
!!! AAAATTTAGTATTGGAAAAA+AGG - Chr7:67811979-67811998 None:intergenic 15.0%
!!! AATGTTATGTATTTTGTTAA+TGG + Chr7:67814407-67814426 MsG0780039702.01.T01:intron 15.0%
!!! GTTTTGTATATATTTTTTCA+AGG - Chr7:67812216-67812235 None:intergenic 15.0%
!!! TTAATAGAATTGATTTCTAT+TGG + Chr7:67810336-67810355 MsG0780039702.01.T01:intron 15.0%
!!! TTTTGTTTTTCTAACAAATT+AGG - Chr7:67812046-67812065 None:intergenic 15.0%
!! AAATCAAACTTTGTATAGAA+TGG - Chr7:67814083-67814102 None:intergenic 20.0%
!! AATAAAAGAAGTTAATGTTG+AGG + Chr7:67811237-67811256 MsG0780039702.01.T01:intron 20.0%
!! AATGTATTCAAAGTTTGAAA+TGG + Chr7:67811265-67811284 MsG0780039702.01.T01:intron 20.0%
!! ACAAACTGAAAATTTAGTAT+TGG - Chr7:67811987-67812006 None:intergenic 20.0%
!! ATAGAACATACTGAAAAATA+AGG + Chr7:67811668-67811687 MsG0780039702.01.T01:intron 20.0%
!! ATTTATTATTCCAAACACTT+TGG + Chr7:67813177-67813196 MsG0780039702.01.T01:intron 20.0%
!! CACTTTCTAATAGTTAATAA+AGG - Chr7:67810609-67810628 None:intergenic 20.0%
!! GAAAAAAAATATATCACTAC+AGG - Chr7:67811957-67811976 None:intergenic 20.0%
!! GAAAGAAAACAAACTATTAA+AGG - Chr7:67812643-67812662 None:intergenic 20.0%
!! GAATGAGAAAAAAATTCTTA+AGG + Chr7:67810647-67810666 MsG0780039702.01.T01:intron 20.0%
!! TACTCATAGAAAATAGAAAT+AGG - Chr7:67811407-67811426 None:intergenic 20.0%
!! TATTAACTATTAGAAAGTGA+TGG + Chr7:67810610-67810629 MsG0780039702.01.T01:intron 20.0%
!! TATTATTTATAAGCTTGTCA+AGG - Chr7:67810906-67810925 None:intergenic 20.0%
!! TTTATGCTTTACAAACTAAT+GGG + Chr7:67812868-67812887 MsG0780039702.01.T01:intron 20.0%
!!! AAAAAAGAGTAAGTTTTAAG+TGG - Chr7:67810566-67810585 None:intergenic 20.0%
!!! AAATTCTAGAGCTTTTAATA+TGG - Chr7:67811731-67811750 None:intergenic 20.0%
!!! AATACTAAATTTTCAGTTTG+TGG + Chr7:67811986-67812005 MsG0780039702.01.T01:intron 20.0%
!!! AATTTATATCCTTATTTTGC+AGG + Chr7:67812107-67812126 MsG0780039702.01.T01:intron 20.0%
!!! AGTGTCTTTATTTGTAAAAT+AGG - Chr7:67813912-67813931 None:intergenic 20.0%
!!! AGTTAATAAAGGGTAATTTT+TGG - Chr7:67810598-67810617 None:intergenic 20.0%
!!! ATAATTTAAAAGTGTCTCAA+AGG + Chr7:67813115-67813134 MsG0780039702.01.T01:intron 20.0%
!!! ATATTTTGTAACTTCAAATC+CGG - Chr7:67813089-67813108 None:intergenic 20.0%
!!! ATGTCAATTCAATATCATTT+TGG - Chr7:67813443-67813462 None:intergenic 20.0%
!!! ATTATTTTGGTCATTTATGA+AGG + Chr7:67812671-67812690 MsG0780039702.01.T01:intron 20.0%
!!! ATTTTTAATCTTCTCTTTTC+AGG + Chr7:67813763-67813782 MsG0780039702.01.T01:intron 20.0%
!!! TAATTTTCCTTGATTATGTT+TGG + Chr7:67814577-67814596 MsG0780039702.01.T01:intron 20.0%
!!! TATTTTCTATGAGTATTGAT+AGG + Chr7:67811412-67811431 MsG0780039702.01.T01:intron 20.0%
!!! TGTCAATTCAATATCATTTT+GGG - Chr7:67813442-67813461 None:intergenic 20.0%
!!! TTTTACAAATAAAGACACTA+AGG + Chr7:67813913-67813932 MsG0780039702.01.T01:intron 20.0%
!!! TTTTTAATCTTCTCTTTTCA+GGG + Chr7:67813764-67813783 MsG0780039702.01.T01:intron 20.0%
!!! TTTTTGAGAAAATTGTTCAT+AGG + Chr7:67815457-67815476 MsG0780039702.01.T01:three_prime_UTR 20.0%
! AAAAATTCTTAAGGTCTGTT+TGG + Chr7:67810656-67810675 MsG0780039702.01.T01:intron 25.0%
! AAAACATGAACCAAAGAAAA+AGG - Chr7:67813686-67813705 None:intergenic 25.0%
! AAAATGTTCATAGTTTCAGA+TGG + Chr7:67813464-67813483 MsG0780039702.01.T01:intron 25.0%
! AAAGTTCCAATTTCAATTGA+TGG + Chr7:67811494-67811513 MsG0780039702.01.T01:CDS 25.0%
! AACTAGAATACCTTATTCTT+AGG - Chr7:67811641-67811660 None:intergenic 25.0%
! AAGATTCCATTATGCTAATT+TGG + Chr7:67810439-67810458 MsG0780039702.01.T01:intron 25.0%
! AATCCTTGTACAAAAAAGTT+TGG + Chr7:67814373-67814392 MsG0780039702.01.T01:intron 25.0%
! AATGAAACCGATATTGATAT+TGG + Chr7:67812152-67812171 MsG0780039702.01.T01:CDS 25.0%
! ACCTAATAATATGCTTCATA+TGG - Chr7:67815036-67815055 None:intergenic 25.0%
! AGGTATTCCAATATCAATAT+CGG - Chr7:67812162-67812181 None:intergenic 25.0%
! ATACCAGAATGATTTGATTA+AGG + Chr7:67810307-67810326 MsG0780039702.01.T01:intron 25.0%
! ATATACTTTACAGGTATGAT+TGG + Chr7:67814454-67814473 MsG0780039702.01.T01:intron 25.0%
! CAAAAATAAGTCAATCCAAA+CGG + Chr7:67810966-67810985 MsG0780039702.01.T01:intron 25.0%
! CATATACCAAATTAGCATAA+TGG - Chr7:67810448-67810467 None:intergenic 25.0%
! CGAATAAATTTGACATGAAA+AGG - Chr7:67812561-67812580 None:intergenic 25.0%
! CTGATTATAAATAACGCTAA+AGG + Chr7:67811888-67811907 MsG0780039702.01.T01:CDS 25.0%
! CTTTAGCGTTATTTATAATC+AGG - Chr7:67811890-67811909 None:intergenic 25.0%
! GATTGTTTGGATAAACTAAA+CGG - Chr7:67810490-67810509 None:intergenic 25.0%
! GTAATTAATTATGCTTTCCT+TGG + Chr7:67812284-67812303 MsG0780039702.01.T01:intron 25.0%
! GTTAAATTGAAAATCTCACA+TGG + Chr7:67814292-67814311 MsG0780039702.01.T01:intron 25.0%
! GTTTATGCTTTACAAACTAA+TGG + Chr7:67812867-67812886 MsG0780039702.01.T01:intron 25.0%
! TATAGATAATTTACCATTGC+AGG + Chr7:67812738-67812757 MsG0780039702.01.T01:intron 25.0%
! TATCGTTAAATAGATAACAC+TGG - Chr7:67814852-67814871 None:intergenic 25.0%
! TCTTTGGATAAACAACTTAA+GGG - Chr7:67810993-67811012 None:intergenic 25.0%
! TTTGTATAGAATGGTAGTAA+CGG - Chr7:67814074-67814093 None:intergenic 25.0%
!! AATACATAACATTCTTTTCC+TGG - Chr7:67814400-67814419 None:intergenic 25.0%
!! AATTTGAAAACCAAAGTGTT+TGG - Chr7:67813190-67813209 None:intergenic 25.0%
!! AATTTTCAGTTTGTGGTTAT+AGG + Chr7:67811993-67812012 MsG0780039702.01.T01:intron 25.0%
!! AGGTATACATTCTTTTTACA+AGG + Chr7:67813933-67813952 MsG0780039702.01.T01:intron 25.0%
!! ATACATTCTTTTTACAAGGT+TGG + Chr7:67813937-67813956 MsG0780039702.01.T01:intron 25.0%
!! ATGCTATAGTTTTCAATGAT+AGG + Chr7:67814540-67814559 MsG0780039702.01.T01:intron 25.0%
!! ATTTTTGTGGAAAATTGAGT+GGG + Chr7:67810099-67810118 MsG0780039702.01.T01:intron 25.0%
!! TTTTACTAACCAGTGTAAAT+GGG - Chr7:67814713-67814732 None:intergenic 25.0%
!!! AAATTTTTTAAATCTCCCTG+TGG - Chr7:67812310-67812329 None:intergenic 25.0%
!!! AGAAGTATTTTTATGGCTTA+TGG + Chr7:67812441-67812460 MsG0780039702.01.T01:CDS 25.0%
!!! ATACATAGCTTTGAATTTGA+TGG + Chr7:67814653-67814672 MsG0780039702.01.T01:CDS 25.0%
!!! ATGTTGCAGAAGTATTTTTA+TGG + Chr7:67812434-67812453 MsG0780039702.01.T01:CDS 25.0%
!!! CTTCATTTTTTTACTCTTTC+TGG + Chr7:67813855-67813874 MsG0780039702.01.T01:CDS 25.0%
!!! CTTTCTGAGATGAATTATTT+TGG + Chr7:67812658-67812677 MsG0780039702.01.T01:intron 25.0%
!!! GAAGTATGTATGAGTTTTTT+CGG + Chr7:67811440-67811459 MsG0780039702.01.T01:intron 25.0%
!!! TATTGTAGGTTTTAGTTTAC+AGG + Chr7:67815237-67815256 MsG0780039702.01.T01:three_prime_UTR 25.0%
!!! TATTTTTGTGGAAAATTGAG+TGG + Chr7:67810098-67810117 MsG0780039702.01.T01:intron 25.0%
!!! TCTTCATTAATGGTTTGTTT+TGG + Chr7:67811212-67811231 MsG0780039702.01.T01:intron 25.0%
!!! TCTTGATTAGTCTTCATTAA+TGG + Chr7:67811202-67811221 MsG0780039702.01.T01:intron 25.0%
!!! TTACATTTTGATACCTAATC+TGG + Chr7:67812332-67812351 MsG0780039702.01.T01:CDS 25.0%
!!! TTTGATTTGTTATTGACTTC+AGG - Chr7:67814799-67814818 None:intergenic 25.0%
!!! TTTGTTTGTTTTTATTTCCC+TGG + Chr7:67810389-67810408 MsG0780039702.01.T01:intron 25.0%
!!! TTTTCTTTTGATTCCAATGT+AGG - Chr7:67811563-67811582 None:intergenic 25.0%
!!! TTTTGATTTGATTTGATGCT+AGG + Chr7:67810029-67810048 MsG0780039702.01.T01:intron 25.0%
AAACATTCTTGTGTATATGC+AGG + Chr7:67815084-67815103 MsG0780039702.01.T01:intron 30.0%
AACTATTAGAAAGTGATGGT+GGG + Chr7:67810614-67810633 MsG0780039702.01.T01:intron 30.0%
AAGAAACATGGATAAGACTT+GGG - Chr7:67814997-67815016 None:intergenic 30.0%
AAGAAGATAGGTGTAAAAGA+AGG - Chr7:67809799-67809818 None:intergenic 30.0%
AAGCCTTAATCAAATCATTC+TGG - Chr7:67810313-67810332 None:intergenic 30.0%
ACTCTGTTGATATACTTTAC+AGG + Chr7:67814445-67814464 MsG0780039702.01.T01:intron 30.0%
AGCGTTATTTATAATCAGGA+TGG - Chr7:67811886-67811905 None:intergenic 30.0%
AGTTTGACCAAAGAAACAAT+GGG - Chr7:67813663-67813682 None:intergenic 30.0%
ATTTGACATGAAAAGGAACT+AGG - Chr7:67812554-67812573 None:intergenic 30.0%
CTATACAATGTCAACTTTAC+AGG + Chr7:67813346-67813365 MsG0780039702.01.T01:intron 30.0%
CTGTAATCCAAACATAATCA+AGG - Chr7:67814587-67814606 None:intergenic 30.0%
CTTCTAAATATAGAGAATGC+TGG + Chr7:67812775-67812794 MsG0780039702.01.T01:intron 30.0%
CTTGTTCTATAAGCGTTAAA+GGG + Chr7:67810829-67810848 MsG0780039702.01.T01:intron 30.0%
GATTTCAGCAAACAACTATA+TGG + Chr7:67811381-67811400 MsG0780039702.01.T01:intron 30.0%
GCCATATGAAGCATATTATT+AGG + Chr7:67815032-67815051 MsG0780039702.01.T01:intron 30.0%
GGAGACTTATAACAAATCAT+AGG + Chr7:67815258-67815277 MsG0780039702.01.T01:three_prime_UTR 30.0%
GTCTTTGGATAAACAACTTA+AGG - Chr7:67810994-67811013 None:intergenic 30.0%
TAACCTATCGAAAGAAAAAC+CGG - Chr7:67811475-67811494 None:intergenic 30.0%
TAACTATTAGAAAGTGATGG+TGG + Chr7:67810613-67810632 MsG0780039702.01.T01:intron 30.0%
TAAGAAACATGGATAAGACT+TGG - Chr7:67814998-67815017 None:intergenic 30.0%
TAGTTAACATTAGTAGTCCA+AGG - Chr7:67814328-67814347 None:intergenic 30.0%
TATATACAAAACAAGTCCAC+AGG + Chr7:67812224-67812243 MsG0780039702.01.T01:CDS 30.0%
TGACAACTTTCATGATTGTT+TGG - Chr7:67810503-67810522 None:intergenic 30.0%
TTATTCTTTGCATGCTTTCA+GGG + Chr7:67813281-67813300 MsG0780039702.01.T01:intron 30.0%
TTGAAAAGTCCTGCAAAATA+AGG - Chr7:67812119-67812138 None:intergenic 30.0%
TTGTAGCAAACCTAAGAATA+AGG + Chr7:67811628-67811647 MsG0780039702.01.T01:CDS 30.0%
TTGTATAGAATGGTAGTAAC+GGG - Chr7:67814073-67814092 None:intergenic 30.0%
TTTACAAACTAATGGGAAGA+TGG + Chr7:67812875-67812894 MsG0780039702.01.T01:intron 30.0%
TTTACCTATTGCAAAAACCA+GGG - Chr7:67810409-67810428 None:intergenic 30.0%
TTTATTCTTTGCATGCTTTC+AGG + Chr7:67813280-67813299 MsG0780039702.01.T01:intron 30.0%
TTTGAATAATCATCACCTTG+AGG - Chr7:67813835-67813854 None:intergenic 30.0%
! AACTTGAGATTTTATGGACA+AGG + Chr7:67815139-67815158 MsG0780039702.01.T01:CDS 30.0%
! ACTATTTCTTTAAGCTCTCT+AGG + Chr7:67810725-67810744 MsG0780039702.01.T01:intron 30.0%
! ACTTGAGATTTTATGGACAA+GGG + Chr7:67815140-67815159 MsG0780039702.01.T01:CDS 30.0%
! CTTTAGTAGCATTTTCGTTA+AGG + Chr7:67814270-67814289 MsG0780039702.01.T01:intron 30.0%
! GTTTTACTAACCAGTGTAAA+TGG - Chr7:67814714-67814733 None:intergenic 30.0%
! TGCAATTTTCGTAATCCAAA+CGG - Chr7:67810856-67810875 None:intergenic 30.0%
! TTTTACCTATTGCAAAAACC+AGG - Chr7:67810410-67810429 None:intergenic 30.0%
!! AGGTGAGTTATTATTTTTCC+AGG + Chr7:67812936-67812955 MsG0780039702.01.T01:intron 30.0%
!! AGTTATTATTTTTCCAGGCT+TGG + Chr7:67812941-67812960 MsG0780039702.01.T01:intron 30.0%
!! ATAGCTTTGAATTTGATGGA+TGG + Chr7:67814657-67814676 MsG0780039702.01.T01:CDS 30.0%
!! CTTTGGTTCATGTTTTATAC+TGG + Chr7:67813690-67813709 MsG0780039702.01.T01:intron 30.0%
!! TAGCTTTGAATTTGATGGAT+GGG + Chr7:67814658-67814677 MsG0780039702.01.T01:CDS 30.0%
!!! ATATTTTTTCAAGGCTTCAC+CGG - Chr7:67812207-67812226 None:intergenic 30.0%
!!! GAGAGTGTAGAGTTTTTTTA+GGG - Chr7:67814119-67814138 None:intergenic 30.0%
!!! TGAGAGTGTAGAGTTTTTTT+AGG - Chr7:67814120-67814139 None:intergenic 30.0%
!!! TGCTTTGAAATTTTCTTGCT+TGG + Chr7:67809959-67809978 MsG0780039702.01.T01:intron 30.0%
!!! TTTTTTACTCTTTCTGGCTA+TGG + Chr7:67813861-67813880 MsG0780039702.01.T01:CDS 30.0%
!!! TTTTTTGGAAATAAGCACCA+CGG + Chr7:67812807-67812826 MsG0780039702.01.T01:intron 30.0%
AAACCTACAATACTATTCCG+CGG - Chr7:67815229-67815248 None:intergenic 35.0%
AACACAGAGAAGAAGAAGAT+AGG - Chr7:67809811-67809830 None:intergenic 35.0%
AAGAATATCTTGACCAATCC+AGG - Chr7:67813618-67813637 None:intergenic 35.0%
AAGACTAATCAAGAAGACAG+AGG - Chr7:67811196-67811215 None:intergenic 35.0%
AAGATGGTTCATTGATGTTC+TGG + Chr7:67812891-67812910 MsG0780039702.01.T01:intron 35.0%
AAGTCAGTTACTCTAGGTTA+AGG - Chr7:67811019-67811038 None:intergenic 35.0%
AATAGATAACACTGGTGTAG+TGG - Chr7:67814844-67814863 None:intergenic 35.0%
AATCTCTTAGCTTATGTCTC+AGG + Chr7:67811359-67811378 MsG0780039702.01.T01:intron 35.0%
ACAATGTAGTTTCACAACCA+AGG + Chr7:67811830-67811849 MsG0780039702.01.T01:CDS 35.0%
ACAGTTAAGTCAGTTACTCT+AGG - Chr7:67811025-67811044 None:intergenic 35.0%
ACCTGTAGATCAAAATCCAA+GGG - Chr7:67814622-67814641 None:intergenic 35.0%
ATAATCATCACCTTGAGGTT+TGG - Chr7:67813830-67813849 None:intergenic 35.0%
ATATGCTTCATATGGCATAG+TGG - Chr7:67815028-67815047 None:intergenic 35.0%
ATGTGACAACAACTTTGTTC+TGG + Chr7:67809903-67809922 MsG0780039702.01.T01:CDS 35.0%
ATGTTTCACTTCTTGTGTGA+AGG + Chr7:67812248-67812267 MsG0780039702.01.T01:intron 35.0%
CAGTTTGTGGTTATAGGTTT+CGG + Chr7:67811999-67812018 MsG0780039702.01.T01:intron 35.0%
CCAAAGTACAAACAGATTCA+TGG - Chr7:67815420-67815439 None:intergenic 35.0%
CCATGAATCTGTTTGTACTT+TGG + Chr7:67815417-67815436 MsG0780039702.01.T01:three_prime_UTR 35.0%
CTATAGCATACCTAAACCAT+AGG - Chr7:67814529-67814548 None:intergenic 35.0%
CTTCCTATATGACATCTTCT+GGG + Chr7:67813981-67814000 MsG0780039702.01.T01:intron 35.0%
CTTCTTTCCCAATGACAAAA+AGG - Chr7:67815112-67815131 None:intergenic 35.0%
GACTTGATTCTATCTTGTCA+TGG + Chr7:67810771-67810790 MsG0780039702.01.T01:intron 35.0%
GAGTTTGACCAAAGAAACAA+TGG - Chr7:67813664-67813683 None:intergenic 35.0%
GCTTGAAATGCTGTTCTTAT+TGG + Chr7:67809987-67810006 MsG0780039702.01.T01:intron 35.0%
GCTTGTTCTATAAGCGTTAA+AGG + Chr7:67810828-67810847 MsG0780039702.01.T01:intron 35.0%
GTATATAGTCCCATTTACAC+TGG + Chr7:67814701-67814720 MsG0780039702.01.T01:CDS 35.0%
GTGGGATATAGTAAGAAACA+TGG - Chr7:67815009-67815028 None:intergenic 35.0%
TATGCTTCATATGGCATAGT+GGG - Chr7:67815027-67815046 None:intergenic 35.0%
TCAAAGCTATGTATGTGACA+AGG - Chr7:67814647-67814666 None:intergenic 35.0%
TCCACACCATCAATTGAAAT+TGG - Chr7:67811503-67811522 None:intergenic 35.0%
TCTCTTGCAGCAATGTAAAA+AGG + Chr7:67811079-67811098 MsG0780039702.01.T01:intron 35.0%
TCTTGACATTATGTTAGAGC+AGG + Chr7:67813008-67813027 MsG0780039702.01.T01:intron 35.0%
TGAGCAAGAGAAGCTATTAA+AGG + Chr7:67812525-67812544 MsG0780039702.01.T01:CDS 35.0%
TGTACAAAAAAGTTTGGACC+AGG + Chr7:67814379-67814398 MsG0780039702.01.T01:intron 35.0%
TTAAAGGAATCTTCTGTGAG+AGG - Chr7:67812627-67812646 None:intergenic 35.0%
TTCTTCAGCTATATTTGCCT+TGG - Chr7:67811850-67811869 None:intergenic 35.0%
TTGTGAAACTACATTGTCCT+CGG - Chr7:67811827-67811846 None:intergenic 35.0%
! AACGCTAGGATACCAAATTT+TGG - Chr7:67813039-67813058 None:intergenic 35.0%
! AGTTTGAAATGGTGAGAACA+AGG + Chr7:67811276-67811295 MsG0780039702.01.T01:intron 35.0%
! CTTCTTACTTTCTCTTTTGC+TGG + Chr7:67809838-67809857 MsG0780039702.01.T01:CDS 35.0%
! CTTGAGATTTTATGGACAAG+GGG + Chr7:67815141-67815160 MsG0780039702.01.T01:CDS 35.0%
! GCAATTTTCGTAATCCAAAC+GGG - Chr7:67810855-67810874 None:intergenic 35.0%
! GCTTATTTCCAAAAAAGCAC+TGG - Chr7:67812803-67812822 None:intergenic 35.0%
! TGGTCAAACTCCTTTTTCTT+TGG + Chr7:67813673-67813692 MsG0780039702.01.T01:intron 35.0%
! TTGAGATTTTATGGACAAGG+GGG + Chr7:67815142-67815161 MsG0780039702.01.T01:CDS 35.0%
! TTGCTTTCCCATTGTTTCTT+TGG + Chr7:67813653-67813672 MsG0780039702.01.T01:intron 35.0%
! TTTTTATGGCTTATGGCTGT+TGG + Chr7:67812448-67812467 MsG0780039702.01.T01:CDS 35.0%
!! ATTTCCCTGGTTTTTGCAAT+AGG + Chr7:67810402-67810421 MsG0780039702.01.T01:intron 35.0%
!! CCTTGAAATTTGTTAGCTCA+CGG + Chr7:67811782-67811801 MsG0780039702.01.T01:intron 35.0%
!! CTTGAAATTTGTTAGCTCAC+GGG + Chr7:67811783-67811802 MsG0780039702.01.T01:intron 35.0%
!! TATGTGAAAGTACCCTTCTT+CGG + Chr7:67813508-67813527 MsG0780039702.01.T01:CDS 35.0%
!! TCCAATTTCAATTGATGGTG+TGG + Chr7:67811499-67811518 MsG0780039702.01.T01:CDS 35.0%
!! TTTTGCAGGACTTTTCAAGA+TGG + Chr7:67812121-67812140 MsG0780039702.01.T01:intron 35.0%
!!! GAAGCTTGTTTTTTGAGCAT+TGG + Chr7:67810186-67810205 MsG0780039702.01.T01:intron 35.0%
!!! GGTCCAAACTTTTTTGTACA+AGG - Chr7:67814379-67814398 None:intergenic 35.0%
!!! GTTTAGTGGTTTTAGTGTAG+CGG - Chr7:67814923-67814942 None:intergenic 35.0%
AAACAACTTAAGGGTCCGTT+TGG - Chr7:67810984-67811003 None:intergenic 40.0%
AAATGGTGAGAACAAGGTGA+TGG + Chr7:67811282-67811301 MsG0780039702.01.T01:intron 40.0%
AACCTACAATACTATTCCGC+GGG - Chr7:67815228-67815247 None:intergenic 40.0%
AACTTCAAATCCGGACAGAA+AGG - Chr7:67813080-67813099 None:intergenic 40.0%
ACAAAGTTGTTGTCACATCC+AGG - Chr7:67809901-67809920 None:intergenic 40.0%
ACACCCAGAAGATGTCATAT+AGG - Chr7:67813987-67814006 None:intergenic 40.0%
ACAGTTTAAATCCTGTCCCT+TGG + Chr7:67814603-67814622 MsG0780039702.01.T01:intron 40.0%
AGTATTGCTCCTAAGAAACC+TGG + Chr7:67809880-67809899 MsG0780039702.01.T01:CDS 40.0%
ATGGTTCATTGATGTTCTGG+TGG + Chr7:67812894-67812913 MsG0780039702.01.T01:intron 40.0%
CAAGAAGTGAAACATACCTG+TGG - Chr7:67812243-67812262 None:intergenic 40.0%
CAAGGATTTGATGTGCACTA+CGG - Chr7:67814361-67814380 None:intergenic 40.0%
CACATGGATCACTTATTCCT+TGG + Chr7:67814308-67814327 MsG0780039702.01.T01:intron 40.0%
CAGCCTAACGATATTGTACA+AGG + Chr7:67815331-67815350 MsG0780039702.01.T01:three_prime_UTR 40.0%
CCAACATCTAACAGTCAAGA+GGG - Chr7:67815392-67815411 None:intergenic 40.0%
CCAGAAGATGTCATATAGGA+AGG - Chr7:67813983-67814002 None:intergenic 40.0%
CCGTGAGCTAACAAATTTCA+AGG - Chr7:67811785-67811804 None:intergenic 40.0%
CCTTCCTATATGACATCTTC+TGG + Chr7:67813980-67813999 MsG0780039702.01.T01:intron 40.0%
CTACACTCTCACTTCTTTAC+AGG + Chr7:67814129-67814148 MsG0780039702.01.T01:intron 40.0%
CTTCTTCTTCTCTGTGTTCA+TGG + Chr7:67809813-67809832 MsG0780039702.01.T01:CDS 40.0%
GACCTGTAGATCAAAATCCA+AGG - Chr7:67814623-67814642 None:intergenic 40.0%
GACTTGGGATAAGTTTCACA+AGG - Chr7:67814982-67815001 None:intergenic 40.0%
GATGATCCTCTTTGATGTGA+GGG - Chr7:67815185-67815204 None:intergenic 40.0%
GCAAATATAGCTGAAGAAGC+TGG + Chr7:67811852-67811871 MsG0780039702.01.T01:CDS 40.0%
GTGCCTTGTACAATATCGTT+AGG - Chr7:67815337-67815356 None:intergenic 40.0%
TAATCATCAAGAACCAAGCC+TGG - Chr7:67812957-67812976 None:intergenic 40.0%
TAGATCAAAATCCAAGGGAC+AGG - Chr7:67814617-67814636 None:intergenic 40.0%
TCATCTGAATCATCCTGCAA+TGG - Chr7:67812754-67812773 None:intergenic 40.0%
TCCAACATCTAACAGTCAAG+AGG - Chr7:67815393-67815412 None:intergenic 40.0%
TCTTGACTGTTAGATGTTGG+AGG + Chr7:67815392-67815411 MsG0780039702.01.T01:three_prime_UTR 40.0%
TGATGATCCTCTTTGATGTG+AGG - Chr7:67815186-67815205 None:intergenic 40.0%
TGCAAGACACAAACCAGATT+AGG - Chr7:67812348-67812367 None:intergenic 40.0%
TGCAAGATTTGGACCTACAT+TGG + Chr7:67811547-67811566 MsG0780039702.01.T01:CDS 40.0%
TGTCCAAATACCAAACCTCA+AGG + Chr7:67813817-67813836 MsG0780039702.01.T01:CDS 40.0%
TTGTCACATCCAGGTTTCTT+AGG - Chr7:67809892-67809911 None:intergenic 40.0%
TTGTCATTGGGAAAGAAGAG+AGG + Chr7:67815114-67815133 MsG0780039702.01.T01:CDS 40.0%
! CTTTTTGCGTAGTCAAACAG+CGG - Chr7:67814957-67814976 None:intergenic 40.0%
! GAGGCGAACTTGAGATTTTA+TGG + Chr7:67815133-67815152 MsG0780039702.01.T01:CDS 40.0%
! GCAGGAACCTTTTTGTCATT+GGG + Chr7:67815102-67815121 MsG0780039702.01.T01:intron 40.0%
! TCACCTTGAGGTTTGGTATT+TGG - Chr7:67813823-67813842 None:intergenic 40.0%
! TCGGGGACATAATTTTACCA+GGG + Chr7:67814247-67814266 MsG0780039702.01.T01:intron 40.0%
! TGCAGGAACCTTTTTGTCAT+TGG + Chr7:67815101-67815120 MsG0780039702.01.T01:intron 40.0%
! TTCGGGGACATAATTTTACC+AGG + Chr7:67814246-67814265 MsG0780039702.01.T01:intron 40.0%
! TTCTGGTGGTTCTTTTGTAG+TGG + Chr7:67812908-67812927 MsG0780039702.01.T01:intron 40.0%
! TTGAATTTGATGGATGGGCA+TGG + Chr7:67814663-67814682 MsG0780039702.01.T01:CDS 40.0%
!! ACTCTTTCTGGCTATGGATA+TGG + Chr7:67813867-67813886 MsG0780039702.01.T01:CDS 40.0%
!! AGCAAATGGCTCTAAAGTCA+TGG + Chr7:67813226-67813245 MsG0780039702.01.T01:intron 40.0%
!! CTATGAGTATTGATAGGTCG+TGG + Chr7:67811418-67811437 MsG0780039702.01.T01:intron 40.0%
!! GACTTTAGAGCCATTTGCTA+TGG - Chr7:67813225-67813244 None:intergenic 40.0%
!! GCAAATGGCTCTAAAGTCAT+GGG + Chr7:67813227-67813246 MsG0780039702.01.T01:intron 40.0%
!! GGTCTGTTTGGATTAGCTTA+TGG + Chr7:67810668-67810687 MsG0780039702.01.T01:intron 40.0%
!! GTTCTTTTGTAGTGGTGTTG+AGG + Chr7:67812916-67812935 MsG0780039702.01.T01:intron 40.0%
!! TCAATTGATGGTGTGGAAAG+CGG + Chr7:67811506-67811525 MsG0780039702.01.T01:CDS 40.0%
!! TCCCTTGGATTTTGATCTAC+AGG + Chr7:67814618-67814637 MsG0780039702.01.T01:intron 40.0%
!! TCTCAACTGTAGCTGTTTTC+TGG + Chr7:67810537-67810556 MsG0780039702.01.T01:intron 40.0%
!! TGACCGGTTTTTCTTTCGAT+AGG + Chr7:67811469-67811488 MsG0780039702.01.T01:intron 40.0%
!! TTAGGTTTGCTACAACAGTC+AGG - Chr7:67811623-67811642 None:intergenic 40.0%
!!! GTTTTTTCGGCAGATTTGAC+CGG + Chr7:67811453-67811472 MsG0780039702.01.T01:intron 40.0%
!!! GTTTTTTGAGCATTGGATGC+TGG + Chr7:67810193-67810212 MsG0780039702.01.T01:intron 40.0%
ACAGCGAATGCTATGCAGAA+GGG - Chr7:67813563-67813582 None:intergenic 45.0%
ACCGCGTTTATTCGATCCTT+GGG + Chr7:67814203-67814222 MsG0780039702.01.T01:intron 45.0%
ACGATGAGTGCCTATGGTTT+AGG + Chr7:67814516-67814535 MsG0780039702.01.T01:CDS 45.0%
ACTTCTTTACAGGTAGCTCG+CGG + Chr7:67814139-67814158 MsG0780039702.01.T01:intron 45.0%
ATAGCATTCGCTGTGGTTTG+GGG + Chr7:67813569-67813588 MsG0780039702.01.T01:intron 45.0%
ATTATGCTTTCCTTGGCCAC+AGG + Chr7:67812291-67812310 MsG0780039702.01.T01:intron 45.0%
CAATCCAGGCATACGATACA+CGG - Chr7:67813604-67813623 None:intergenic 45.0%
CACATTAGTGCCTTTCTGTC+CGG + Chr7:67813067-67813086 MsG0780039702.01.T01:intron 45.0%
CATAGCATTCGCTGTGGTTT+GGG + Chr7:67813568-67813587 MsG0780039702.01.T01:intron 45.0%
CCACTATCATCACACTCTCA+TGG - Chr7:67814029-67814048 None:intergenic 45.0%
CCATTCTCTGTGCTTCTTAC+TGG + Chr7:67812473-67812492 MsG0780039702.01.T01:CDS 45.0%
CCCTCTTGACTGTTAGATGT+TGG + Chr7:67815389-67815408 MsG0780039702.01.T01:three_prime_UTR 45.0%
CGAAAATGCTACTAAAGCCC+TGG - Chr7:67814267-67814286 None:intergenic 45.0%
CTCTAGGTTAAGGTCGTCTT+TGG - Chr7:67811009-67811028 None:intergenic 45.0%
GAGCAGGCTACACCAAAATT+TGG + Chr7:67813024-67813043 MsG0780039702.01.T01:intron 45.0%
GGGACTATATACAGCAAAGC+TGG - Chr7:67814693-67814712 None:intergenic 45.0%
GGTGATAAGAGTGGAGAAGA+TGG + Chr7:67814160-67814179 MsG0780039702.01.T01:intron 45.0%
GTCCTGTCATCCATAGCAAA+TGG + Chr7:67813212-67813231 MsG0780039702.01.T01:intron 45.0%
GTGCAGACACAGAATACACT+AGG + Chr7:67811132-67811151 MsG0780039702.01.T01:intron 45.0%
TACCGCGTTTATTCGATCCT+TGG + Chr7:67814202-67814221 MsG0780039702.01.T01:intron 45.0%
TTATGCTTTCCTTGGCCACA+GGG + Chr7:67812292-67812311 MsG0780039702.01.T01:intron 45.0%
TTCGAGCAGGATACTTCTTG+TGG + Chr7:67814493-67814512 MsG0780039702.01.T01:CDS 45.0%
TTGCTCAATAACACCCTCTC+TGG - Chr7:67812512-67812531 None:intergenic 45.0%
TTGGTATCCTAGCGTTCAGA+CGG + Chr7:67813043-67813062 MsG0780039702.01.T01:intron 45.0%
TTTAAATCTCCCTGTGGCCA+AGG - Chr7:67812304-67812323 None:intergenic 45.0%
! ATGTGAAACAGCACCGAAGA+AGG - Chr7:67813524-67813543 None:intergenic 45.0%
! CCAGTAAGAAGCACAGAGAA+TGG - Chr7:67812476-67812495 None:intergenic 45.0%
! CCATGAGAGTGTGATGATAG+TGG + Chr7:67814026-67814045 MsG0780039702.01.T01:intron 45.0%
! GTTTGCTACAACAGTCAGGA+GGG - Chr7:67811619-67811638 None:intergenic 45.0%
! TGTGAAACAGCACCGAAGAA+GGG - Chr7:67813523-67813542 None:intergenic 45.0%
!! ACAAGAAGTATCCTGCTCGA+AGG - Chr7:67814494-67814513 None:intergenic 45.0%
!! AGCCATTTGCTATGGATGAC+AGG - Chr7:67813217-67813236 None:intergenic 45.0%
!! ATGTGAGGGCAAGGCATTTT+TGG - Chr7:67815171-67815190 None:intergenic 45.0%
!! GGTTACAGTGTCATCGGTTT+CGG + Chr7:67814228-67814247 MsG0780039702.01.T01:intron 45.0%
!! GTTACAGTGTCATCGGTTTC+GGG + Chr7:67814229-67814248 MsG0780039702.01.T01:intron 45.0%
!! TTACAGTGTCATCGGTTTCG+GGG + Chr7:67814230-67814249 MsG0780039702.01.T01:intron 45.0%
!!! TGCTGGTTCCAGTGCTTTTT+TGG + Chr7:67812792-67812811 MsG0780039702.01.T01:intron 45.0%
!!! AATTTATTTTTATATTTTTG+TGG + Chr7:67810086-67810105 MsG0780039702.01.T01:intron 5.0%
!!! TTTATTAATATTTTGTAATA+TGG + Chr7:67811755-67811774 MsG0780039702.01.T01:intron 5.0%
AATGTGTCCGTCTGAACGCT+AGG - Chr7:67813053-67813072 None:intergenic 50.0%
ACTTCTGCAACATCGACCTG+TGG - Chr7:67812427-67812446 None:intergenic 50.0%
AGCGAATGCTATGCAGAAGG+GGG - Chr7:67813561-67813580 None:intergenic 50.0%
AGTAGACGAGTAATCTCCCG+CGG + Chr7:67815209-67815228 MsG0780039702.01.T01:exon 50.0%
ATGACACTGTAACCACCCCA+AGG - Chr7:67814222-67814241 None:intergenic 50.0%
CACAGCGAATGCTATGCAGA+AGG - Chr7:67813564-67813583 None:intergenic 50.0%
CAGCGAATGCTATGCAGAAG+GGG - Chr7:67813562-67813581 None:intergenic 50.0%
CCCCAAGGATCGAATAAACG+CGG - Chr7:67814207-67814226 None:intergenic 50.0%
CCGCGTTTATTCGATCCTTG+GGG + Chr7:67814204-67814223 MsG0780039702.01.T01:intron 50.0%
CGGCAATGGCAACTCTAGTA+TGG - Chr7:67811595-67811614 None:intergenic 50.0%
CGGCTATCACAGTGGTTTAG+TGG - Chr7:67814937-67814956 None:intergenic 50.0%
CGTGTATCGTATGCCTGGAT+TGG + Chr7:67813602-67813621 MsG0780039702.01.T01:intron 50.0%
CGTTTATTCGATCCTTGGGG+TGG + Chr7:67814207-67814226 MsG0780039702.01.T01:intron 50.0%
CTCCCGCGGAATAGTATTGT+AGG + Chr7:67815223-67815242 MsG0780039702.01.T01:three_prime_UTR 50.0%
CTTCTGCATAGCATTCGCTG+TGG + Chr7:67813562-67813581 MsG0780039702.01.T01:CDS 50.0%
GCATAGCATTCGCTGTGGTT+TGG + Chr7:67813567-67813586 MsG0780039702.01.T01:intron 50.0%
TAAGCGTTAAAGGGCCCGTT+TGG + Chr7:67810838-67810857 MsG0780039702.01.T01:intron 50.0%
TCAAACAGCGGCTATCACAG+TGG - Chr7:67814945-67814964 None:intergenic 50.0%
TCCTCTTTGATGTGAGGGCA+AGG - Chr7:67815180-67815199 None:intergenic 50.0%
TCTTCTGTGAGAGGACTGTG+AGG - Chr7:67812618-67812637 None:intergenic 50.0%
TGGGGTGGTTACAGTGTCAT+CGG + Chr7:67814222-67814241 MsG0780039702.01.T01:intron 50.0%
TTGTGGACGATGAGTGCCTA+TGG + Chr7:67814510-67814529 MsG0780039702.01.T01:CDS 50.0%
! GGGACTGCAAACTTGCTTAG+TGG + Chr7:67813301-67813320 MsG0780039702.01.T01:intron 50.0%
! GGTATGATTGGCTAGCGAAG+AGG + Chr7:67814466-67814485 MsG0780039702.01.T01:intron 50.0%
!! AACGAATGAAAGTGCTGCCG+TGG - Chr7:67812827-67812846 None:intergenic 50.0%
!! GAGATCATTTTGGTGCACCG+AGG + Chr7:67811807-67811826 MsG0780039702.01.T01:CDS 50.0%
!! GGTTTGCTACAACAGTCAGG+AGG - Chr7:67811620-67811639 None:intergenic 50.0%
!! GTCGGTGTTGGTGCAAGATT+TGG + Chr7:67811536-67811555 MsG0780039702.01.T01:CDS 50.0%
AACGCCGTGTATCGTATGCC+TGG + Chr7:67813597-67813616 MsG0780039702.01.T01:intron 55.0%
ACCTGCTGTCATGCTTCCAC+TGG + Chr7:67812178-67812197 MsG0780039702.01.T01:CDS 55.0%
ACGCGGTATCTTGAGCAGCA+TGG - Chr7:67814190-67814209 None:intergenic 55.0%
ATACTCTCCACGACGTCCAC+AGG + Chr7:67812408-67812427 MsG0780039702.01.T01:intron 55.0%
CGCGGTATCTTGAGCAGCAT+GGG - Chr7:67814189-67814208 None:intergenic 55.0%
GCCTTGCCCTCACATCAAAG+AGG + Chr7:67815176-67815195 MsG0780039702.01.T01:CDS 55.0%
GCGGGAGATTACTCGTCTAC+TGG - Chr7:67815210-67815229 None:intergenic 55.0%
GCTACAACAGTCAGGAGGGT+CGG - Chr7:67811615-67811634 None:intergenic 55.0%
GTAGCTCGCGGTGATAAGAG+TGG + Chr7:67814151-67814170 MsG0780039702.01.T01:intron 55.0%
GTCATGCTTCCACTGGATGC+CGG + Chr7:67812185-67812204 MsG0780039702.01.T01:CDS 55.0%
GTGGAAAGCGGCGAGTATGT+CGG + Chr7:67811518-67811537 MsG0780039702.01.T01:CDS 55.0%
! GCTCACGGGCGAGATCATTT+TGG + Chr7:67811797-67811816 MsG0780039702.01.T01:intron 55.0%
! GTGCTTCTTACTGGTCTGCC+TGG + Chr7:67812482-67812501 MsG0780039702.01.T01:CDS 55.0%
! TCCAGTGGAAGCATGACAGC+AGG - Chr7:67812182-67812201 None:intergenic 55.0%
AACACCCTCTCTGGCAGTCC+AGG - Chr7:67812503-67812522 None:intergenic 60.0%
AAGGCTTCACCGGCATCCAG+TGG - Chr7:67812197-67812216 None:intergenic 60.0%
ACAGTCAGGAGGGTCGGCAA+TGG - Chr7:67811609-67811628 None:intergenic 60.0%
ACATCGACCTGTGGACGTCG+TGG - Chr7:67812418-67812437 None:intergenic 60.0%
AGCGGCGAGTATGTCGGTGT+TGG + Chr7:67811524-67811543 MsG0780039702.01.T01:CDS 60.0%
GCGAAGAGGAACCTTCGAGC+AGG + Chr7:67814480-67814499 MsG0780039702.01.T01:intron 60.0%
TCTGCCTGGACTGCCAGAGA+GGG + Chr7:67812496-67812515 MsG0780039702.01.T01:CDS 60.0%
GTCTGCCTGGACTGCCAGAG+AGG + Chr7:67812495-67812514 MsG0780039702.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 67809793 67815481 67809793 ID=MsG0780039702.01;Name=MsG0780039702.01
Chr7 mRNA 67809793 67815481 67809793 ID=MsG0780039702.01.T01;Parent=MsG0780039702.01;Name=MsG0780039702.01.T01;_AED=0.38;_eAED=0.42;_QI=0|0.18|0.16|1|1|1|12|260|394
Chr7 exon 67809793 67809924 67809793 ID=MsG0780039702.01.T01:exon:11555;Parent=MsG0780039702.01.T01
Chr7 exon 67811491 67811649 67811491 ID=MsG0780039702.01.T01:exon:11556;Parent=MsG0780039702.01.T01
Chr7 exon 67811798 67811909 67811798 ID=MsG0780039702.01.T01:exon:11557;Parent=MsG0780039702.01.T01
Chr7 exon 67812129 67812245 67812129 ID=MsG0780039702.01.T01:exon:11558;Parent=MsG0780039702.01.T01
Chr7 exon 67812313 67812353 67812313 ID=MsG0780039702.01.T01:exon:11559;Parent=MsG0780039702.01.T01
Chr7 exon 67812430 67812546 67812430 ID=MsG0780039702.01.T01:exon:11560;Parent=MsG0780039702.01.T01
Chr7 exon 67813302 67813336 67813302 ID=MsG0780039702.01.T01:exon:11561;Parent=MsG0780039702.01.T01
Chr7 exon 67813483 67813583 67813483 ID=MsG0780039702.01.T01:exon:11562;Parent=MsG0780039702.01.T01
Chr7 exon 67813785 67813904 67813785 ID=MsG0780039702.01.T01:exon:11563;Parent=MsG0780039702.01.T01
Chr7 exon 67814486 67814537 67814486 ID=MsG0780039702.01.T01:exon:11564;Parent=MsG0780039702.01.T01
Chr7 exon 67814640 67814722 67814640 ID=MsG0780039702.01.T01:exon:11565;Parent=MsG0780039702.01.T01
Chr7 exon 67815106 67815481 67815106 ID=MsG0780039702.01.T01:exon:11566;Parent=MsG0780039702.01.T01
Chr7 CDS 67809793 67809924 67809793 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67811491 67811649 67811491 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67811798 67811909 67811798 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67812129 67812245 67812129 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67812313 67812353 67812313 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67812430 67812546 67812430 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67813302 67813336 67813302 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67813483 67813583 67813483 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67813785 67813904 67813785 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67814486 67814537 67814486 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67814640 67814722 67814640 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 CDS 67815106 67815221 67815106 ID=MsG0780039702.01.T01:cds;Parent=MsG0780039702.01.T01
Chr7 three_prime_UTR 67815222 67815481 67815222 ID=MsG0780039702.01.T01:three_prime_utr;Parent=MsG0780039702.01.T01
Gene Sequence

>MsG0780039702.01.T01

ATGCCTTCTTTTACACCTATCTTCTTCTTCTCTGTGTTCATGGTTCTTCTTACTTTCTCTTTTGCTGGTGATATAGTTCATCATGATAGTATTGCTCCTAAGAAACCTGGATGTGACAACAACTTTGTTCTGGTTAAAGTTCCAATTTCAATTGATGGTGTGGAAAGCGGCGAGTATGTCGGTGTTGGTGCAAGATTTGGACCTACATTGGAATCAAAAGAAAAACGTGCTAACCATACTAGAGTTGCCATTGCCGACCCTCCTGACTGTTGTAGCAAACCTAAGAATAAGCTCACGGGCGAGATCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTGATTATAAATAACGCTAAAGGACTTTTCAAGATGGTTTGTGAAAATGAAACCGATATTGATATTGGAATACCTGCTGTCATGCTTCCACTGGATGCCGGTGAAGCCTTGAAAAAATATATACAAAACAAGTCCACAGGGAGATTTAAAAAATTTGTTTACATTTTGATACCTAATCTGGTCGATGTTGCAGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTACTGGTCTGCCTGGACTGCCAGAGAGGGTGTTATTGAGCAAGAGAAGCTATTAAAGGGACTGCAAACTTGCTTAGTGGCTCTTTTATCACAATGGTCTCAACATGCTGCACAAACATATGTGAAAGTACCCTTCTTCGGTGCTGTTTCACATCTCACTCTTGCTGTCCCCCTTCTGCATAGCATTCGCTGTGGGTATCGCTTTGATAATTACGGTTCTTCAGATTGTCCAAATACCAAACCTCAAGGTGATGATTATTCAAACTTCATTTTTTTACTCTTTCTGGCTATGGATATGGATTTACTTCATTCTAAGGAACCTTCGAGCAGGATACTTCTTGTGGACGATGAGTGCCTATGGTTTAGGTCTCCTTGTCACATACATAGCTTTGAATTTGATGGATGGGCATGGTCAACCAGCTTTGCTGTATATAGTCCCATTTACACTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGCGAACTTGAGATTTTATGGACAAGGGGGATGCCAAAAATGCCTTGCCCTCACATCAAAGAGGATCATCAACCAGTAGACGAGTAA

Protein sequence

>MsG0780039702.01.T01

MPSFTPIFFFSVFMVLLTFSFAGDIVHHDSIAPKKPGCDNNFVLVKVPISIDGVESGEYVGVGARFGPTLESKEKRANHTRVAIADPPDCCSKPKNKLTGEIILVHRGQCSFTTKANIAEEAGASAILIINNAKGLFKMVCENETDIDIGIPAVMLPLDAGEALKKYIQNKSTGRFKKFVYILIPNLVDVAEVFLWLMAVGTILCASYWSAWTAREGVIEQEKLLKGLQTCLVALLSQWSQHAAQTYVKVPFFGAVSHLTLAVPLLHSIRCGYRFDNYGSSDCPNTKPQGDDYSNFIFLLFLAMDMDLLHSKEPSSRILLVDDECLWFRSPCHIHSFEFDGWAWSTSFAVYSPIYTGTFLSLGKKRGELEILWTRGMPKMPCPHIKEDHQPVDE*