AlfalfaGEDB | MsG0780041482.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041482.01

KEGG: -
GO: -
PFAM: PF04398

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041482.01.T01	XP_013450442.1	96.532	173	2	3	1	172	1	170	1.23E-110	322

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041482.01.T01	B7FGJ8	96.532	173	2	3	1	172	1	170	5.86e-111	322

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047958.01	MsG0780041482.01	0.815314	9.850018e-52	6.767972e-49
MsG0080048152.01	MsG0780041482.01	0.800435	1.443405e-48	6.720438e-46
MsG0080048307.01	MsG0780041482.01	0.847092	1.438584e-59	2.529148e-56
MsG0080048383.01	MsG0780041482.01	0.807445	5.036352e-50	2.805702e-47
MsG0080048769.01	MsG0780041482.01	0.805056	1.604704e-49	8.406982e-47
MsG0180000114.01	MsG0780041482.01	0.891721	3.068085e-74	2.721443e-70
MsG0180000144.01	MsG0780041482.01	0.816084	6.637117e-52	4.657795e-49
MsG0180000192.01	MsG0780041482.01	0.801127	1.042643e-48	4.940542e-46
MsG0180000218.01	MsG0780041482.01	-0.840577	7.998243e-58	1.144170e-54
MsG0180000354.01	MsG0780041482.01	0.807217	5.629106e-50	3.117405e-47
MsG0180000355.01	MsG0780041482.01	0.821281	4.389866e-53	3.555665e-50
MsG0180000400.01	MsG0780041482.01	-0.859684	3.488596e-63	9.291525e-60
MsG0180000403.01	MsG0780041482.01	0.821704	3.505015e-53	2.873014e-50
MsG0180000482.01	MsG0780041482.01	0.822015	2.969806e-53	2.455729e-50
MsG0180000509.01	MsG0780041482.01	0.816189	6.288077e-52	4.425418e-49
MsG0180000782.01	MsG0780041482.01	0.805122	1.554986e-49	8.160180e-47
MsG0180000784.01	MsG0780041482.01	0.809244	2.082614e-50	1.216494e-47
MsG0180000785.01	MsG0780041482.01	0.841431	4.770532e-58	7.008737e-55
MsG0180000787.01	MsG0780041482.01	0.838073	3.570606e-57	4.729350e-54
MsG0180000814.01	MsG0780041482.01	0.813705	2.236163e-51	1.470939e-48
MsG0180000836.01	MsG0780041482.01	0.810244	1.269335e-50	7.612392e-48
MsG0180000854.01	MsG0780041482.01	0.800862	1.180870e-48	5.558086e-46
MsG0180001002.01	MsG0780041482.01	0.821957	3.062911e-53	2.528560e-50
MsG0180001020.01	MsG0780041482.01	0.817221	3.689484e-52	2.670931e-49
MsG0180001100.01	MsG0780041482.01	0.846941	1.582256e-59	2.767779e-56
MsG0180001105.01	MsG0780041482.01	0.841893	3.604918e-58	5.372482e-55
MsG0180001173.01	MsG0780041482.01	0.807589	4.695127e-50	2.625228e-47
MsG0180001311.01	MsG0780041482.01	0.859167	4.986863e-63	1.304794e-59
MsG0180001315.01	MsG0780041482.01	0.838746	2.395041e-57	3.238134e-54
MsG0180001662.01	MsG0780041482.01	0.813637	2.314313e-51	1.519497e-48
MsG0180001799.01	MsG0780041482.01	0.801560	8.498670e-49	4.071133e-46
MsG0180001937.01	MsG0780041482.01	0.800851	1.187040e-48	5.585643e-46
MsG0180002399.01	MsG0780041482.01	0.818798	1.624309e-52	1.227950e-49
MsG0180002664.01	MsG0780041482.01	0.843384	1.448274e-58	2.262370e-55
MsG0180002796.01	MsG0780041482.01	0.805653	1.203088e-49	6.400392e-47
MsG0180002799.01	MsG0780041482.01	0.816905	4.346325e-52	3.119317e-49
MsG0180003353.01	MsG0780041482.01	0.829267	5.663947e-55	5.768748e-52
MsG0180003357.01	MsG0780041482.01	0.820589	6.332570e-53	5.031227e-50
MsG0180003379.01	MsG0780041482.01	0.816316	5.889470e-52	4.159445e-49
MsG0180003725.01	MsG0780041482.01	0.821330	4.276819e-53	3.469036e-50
MsG0180003807.01	MsG0780041482.01	0.859563	3.793348e-63	1.006059e-59
MsG0180003821.01	MsG0780041482.01	0.844879	5.751037e-59	9.413782e-56
MsG0180003885.01	MsG0780041482.01	0.857515	1.548666e-62	3.832388e-59
MsG0180003922.01	MsG0780041482.01	0.811074	8.396406e-51	5.147838e-48
MsG0180003932.01	MsG0780041482.01	0.840859	6.744034e-58	9.733272e-55
MsG0180004205.01	MsG0780041482.01	0.821977	3.030168e-53	2.502967e-50
MsG0180004246.01	MsG0780041482.01	0.822636	2.130273e-53	1.793270e-50
MsG0180004283.01	MsG0780041482.01	0.832178	1.096047e-55	1.215664e-52
MsG0180004390.01	MsG0780041482.01	0.803489	3.401423e-49	1.711575e-46
MsG0180004486.01	MsG0780041482.01	0.873006	2.052871e-67	8.768852e-64
MsG0180004493.01	MsG0780041482.01	0.878974	1.818734e-69	9.689548e-66
MsG0180004605.01	MsG0780041482.01	-0.803067	4.161278e-49	2.071171e-46
MsG0180004725.01	MsG0780041482.01	0.810949	8.936328e-51	5.461281e-48
MsG0180004843.01	MsG0780041482.01	0.830869	2.303406e-55	2.457804e-52
MsG0180005049.01	MsG0780041482.01	0.836215	1.066074e-56	1.334772e-53
MsG0180005153.01	MsG0780041482.01	0.808680	2.749321e-50	1.581911e-47
MsG0180005169.01	MsG0780041482.01	0.805282	1.439476e-49	7.584739e-47
MsG0180005205.01	MsG0780041482.01	0.829109	6.185405e-55	6.269694e-52
MsG0180005354.01	MsG0780041482.01	0.804051	2.600322e-49	1.327504e-46
MsG0180005397.01	MsG0780041482.01	0.819292	1.253970e-52	9.609792e-50
MsG0180005429.01	MsG0780041482.01	0.840452	8.623278e-58	1.228863e-54
MsG0180005443.01	MsG0780041482.01	0.803519	3.353685e-49	1.688880e-46
MsG0180005445.01	MsG0780041482.01	0.816464	5.456208e-52	3.868726e-49
MsG0180005451.01	MsG0780041482.01	0.807996	3.847460e-50	2.174414e-47
MsG0180005509.01	MsG0780041482.01	0.823124	1.639754e-53	1.399512e-50
MsG0180005730.01	MsG0780041482.01	0.807206	5.660189e-50	3.133721e-47
MsG0180005786.01	MsG0780041482.01	0.833672	4.660972e-56	5.405162e-53
MsG0180005787.01	MsG0780041482.01	0.820791	5.692126e-53	4.548099e-50
MsG0180005807.01	MsG0780041482.01	0.837367	5.420855e-57	7.025712e-54
MsG0180006017.01	MsG0780041482.01	0.829151	6.044259e-55	6.134042e-52
MsG0180006025.01	MsG0780041482.01	0.815685	8.142940e-52	5.652566e-49
MsG0180006104.01	MsG0780041482.01	0.884087	2.586258e-71	1.683270e-67
MsG0180006225.01	MsG0780041482.01	0.828842	7.179309e-55	7.219562e-52
MsG0180006243.01	MsG0780041482.01	0.870283	1.639765e-66	6.343688e-63
MsG0280006367.01	MsG0780041482.01	0.801550	8.541017e-49	4.090309e-46
MsG0280006368.01	MsG0780041482.01	0.812352	4.427964e-51	2.808954e-48
MsG0780040254.01	MsG0780041482.01	0.848289	6.739928e-60	1.230976e-56
MsG0780040286.01	MsG0780041482.01	0.827625	1.410510e-54	1.368959e-51
MsG0780040287.01	MsG0780041482.01	0.817339	3.471235e-52	2.521093e-49
MsG0780040430.01	MsG0780041482.01	0.827970	1.165478e-54	1.142804e-51
MsG0780040431.01	MsG0780041482.01	0.805645	1.207582e-49	6.422957e-47
MsG0780040794.01	MsG0780041482.01	0.811223	7.796961e-51	4.798985e-48
MsG0780040871.01	MsG0780041482.01	0.805715	1.167500e-49	6.221232e-47
MsG0780040888.01	MsG0780041482.01	0.830413	2.978576e-55	3.135834e-52
MsG0780041091.01	MsG0780041482.01	0.830543	2.768714e-55	2.925833e-52
MsG0780041127.01	MsG0780041482.01	0.828896	6.965835e-55	7.016205e-52
MsG0780041187.01	MsG0780041482.01	0.810367	1.193849e-50	7.182781e-48
MsG0780041229.01	MsG0780041482.01	0.816094	6.601211e-52	4.633869e-49
MsG0780041387.01	MsG0780041482.01	0.823535	1.314631e-53	1.135014e-50
MsG0780041432.01	MsG0780041482.01	0.863998	1.668224e-64	5.157036e-61
MsG0780041435.01	MsG0780041482.01	0.824294	8.724097e-54	7.695108e-51
MsG0780041440.01	MsG0780041482.01	0.831064	2.062746e-55	2.213804e-52
MsG0780041482.01	MsG0780041634.01	0.829894	3.987148e-55	4.135646e-52
MsG0780041482.01	MsG0780041647.01	0.813327	2.707338e-51	1.762676e-48
MsG0780041482.01	MsG0780041729.01	-0.849408	3.296465e-60	6.242886e-57
MsG0780041482.01	MsG0780041734.01	-0.847786	9.277682e-60	1.667298e-56
MsG0780041482.01	MsG0880041834.01	0.819310	1.242138e-52	9.523801e-50
MsG0780041482.01	MsG0880041854.01	0.801981	6.966879e-49	3.373039e-46
MsG0780041482.01	MsG0880042033.01	0.818498	1.899315e-52	1.424107e-49
MsG0780041482.01	MsG0880042206.01	0.811468	6.897566e-51	4.273030e-48
MsG0780041482.01	MsG0880042399.01	-0.834855	2.354389e-56	2.829027e-53
MsG0780041482.01	MsG0880042520.01	0.808370	3.202502e-50	1.827915e-47
MsG0780041482.01	MsG0880042760.01	0.803107	4.082663e-49	2.034142e-46
MsG0780041482.01	MsG0880042857.01	0.831902	1.283069e-55	1.411794e-52
MsG0780041482.01	MsG0880043014.01	0.805885	1.075488e-49	5.755768e-47
MsG0780041482.01	MsG0880043128.01	0.818326	2.077936e-52	1.550615e-49
MsG0780041482.01	MsG0880043157.01	0.800652	1.303547e-48	6.102772e-46
MsG0780041482.01	MsG0880043162.01	0.818806	1.617587e-52	1.223118e-49
MsG0780041482.01	MsG0880043480.01	0.819361	1.209232e-52	9.284760e-50
MsG0780041482.01	MsG0880043521.01	0.804617	1.982559e-49	1.026910e-46
MsG0780041482.01	MsG0880043965.01	0.801800	7.588812e-49	3.657487e-46
MsG0780041482.01	MsG0880044005.01	0.802871	4.566458e-49	2.261744e-46
MsG0780041482.01	MsG0880044948.01	0.828938	6.805652e-55	6.863201e-52
MsG0780041482.01	MsG0880045044.01	0.812545	4.017366e-51	2.561643e-48
MsG0780041482.01	MsG0880045329.01	0.831971	1.233512e-55	1.359933e-52
MsG0780041482.01	MsG0880045448.01	0.809838	1.552127e-50	9.210445e-48
MsG0780041482.01	MsG0880045460.01	0.822569	2.207913e-53	1.855132e-50
MsG0780041482.01	MsG0880045558.01	0.838205	3.302844e-57	4.392219e-54
MsG0780041482.01	MsG0880045613.01	0.802951	4.395655e-49	2.181507e-46
MsG0780041482.01	MsG0880045684.01	0.814629	1.397515e-51	9.425894e-49
MsG0780041482.01	MsG0880046517.01	0.834288	3.268210e-56	3.861247e-53
MsG0780041482.01	MsG0880046684.01	0.818355	2.047059e-52	1.528881e-49
MsG0780041482.01	MsG0880046790.01	0.809958	1.462776e-50	8.707483e-48
MsG0780041482.01	MsG0880046830.01	0.803158	3.983465e-49	1.987455e-46
MsG0780041482.01	MsG0880046867.01	0.813814	2.115430e-51	1.395644e-48
MsG0780041482.01	MsG0880046901.01	0.839702	1.352609e-57	1.882982e-54
MsG0780041482.01	MsG0880047046.01	0.824871	6.380840e-54	5.723238e-51
MsG0780041482.01	MsG0880047152.01	0.859166	4.990339e-63	1.305628e-59
MsG0780041482.01	MsG0880047394.01	0.808190	3.498904e-50	1.987639e-47
MsG0780041482.01	MsG0880047519.01	0.869722	2.502663e-66	9.486467e-63
MsG0780041482.01	MsG0880047538.01	0.801821	7.513765e-49	3.623293e-46
MsG0780041482.01	MsG0880047696.01	0.909751	4.025245e-82	7.949085e-78
MsG0780041482.01	MsG0880047703.01	0.841210	5.454195e-58	7.956825e-55
MsG0280010560.01	MsG0780041482.01	0.804260	2.352446e-49	1.207353e-46
MsG0280010598.01	MsG0780041482.01	0.823735	1.180365e-53	1.025052e-50
MsG0280010599.01	MsG0780041482.01	0.857231	1.878973e-62	4.605468e-59
MsG0280010753.01	MsG0780041482.01	0.801830	7.480481e-49	3.608120e-46
MsG0280010916.01	MsG0780041482.01	0.848776	4.941130e-60	9.167869e-57
MsG0280010976.01	MsG0780041482.01	0.821372	4.180616e-53	3.394883e-50
MsG0280011027.01	MsG0780041482.01	0.827676	1.371588e-54	1.333286e-51
MsG0280011073.01	MsG0780041482.01	0.817935	2.546814e-52	1.880168e-49
MsG0280011109.01	MsG0780041482.01	0.801277	9.716007e-49	4.621228e-46
MsG0280011134.01	MsG0780041482.01	-0.823832	1.119975e-53	9.751902e-51
MsG0280011201.01	MsG0780041482.01	0.805843	1.097365e-49	5.866593e-47
MsG0280011248.01	MsG0780041482.01	0.802138	6.467274e-49	3.143832e-46
MsG0280011287.01	MsG0780041482.01	0.810426	1.159392e-50	6.986222e-48
MsG0280011333.01	MsG0780041482.01	0.821318	4.303163e-53	3.489138e-50
MsG0280011401.01	MsG0780041482.01	0.804146	2.485196e-49	1.271797e-46
MsG0280011413.01	MsG0780041482.01	0.805913	1.060919e-49	5.681868e-47
MsG0280011444.01	MsG0780041482.01	0.829599	4.703937e-55	4.837094e-52
MsG0380011669.01	MsG0780041482.01	0.811203	7.872962e-51	4.843263e-48
MsG0380011828.01	MsG0780041482.01	0.818223	2.192117e-52	1.631120e-49
MsG0380011927.01	MsG0780041482.01	0.815720	8.000757e-52	5.559168e-49
MsG0380012011.01	MsG0780041482.01	0.808373	3.197618e-50	1.825262e-47
MsG0380012034.01	MsG0780041482.01	0.813245	2.822759e-51	1.833581e-48
MsG0380012067.01	MsG0780041482.01	0.804760	1.850232e-49	9.619955e-47
MsG0380012442.01	MsG0780041482.01	0.800348	1.503077e-48	6.982948e-46
MsG0380013050.01	MsG0780041482.01	-0.809624	1.725679e-50	1.018298e-47
MsG0380013145.01	MsG0780041482.01	0.830475	2.875500e-55	3.032666e-52
MsG0380013183.01	MsG0780041482.01	0.803077	4.139732e-49	2.061035e-46
MsG0380013471.01	MsG0780041482.01	0.833187	6.157600e-56	7.038384e-53
MsG0380013686.01	MsG0780041482.01	0.896054	5.326125e-76	5.666337e-72
MsG0380014706.01	MsG0780041482.01	0.867822	1.030486e-65	3.646670e-62
MsG0380014866.01	MsG0780041482.01	0.809859	1.536710e-50	9.123479e-48
MsG0680030784.01	MsG0780041482.01	0.819885	9.180690e-53	7.153631e-50
MsG0680031000.01	MsG0780041482.01	0.834069	3.709394e-56	4.353359e-53
MsG0680031130.01	MsG0780041482.01	-0.814763	1.305532e-51	8.836682e-49
MsG0680031145.01	MsG0780041482.01	0.850090	2.125244e-60	4.116004e-57
MsG0680031276.01	MsG0780041482.01	0.807275	5.471952e-50	3.035024e-47
MsG0680031301.01	MsG0780041482.01	0.835033	2.123446e-56	2.565146e-53
MsG0680031469.01	MsG0780041482.01	0.829739	4.348246e-55	4.490270e-52
MsG0680031699.01	MsG0780041482.01	0.806314	8.734373e-50	4.725807e-47
MsG0680031815.01	MsG0780041482.01	0.821290	4.368856e-53	3.539631e-50
MsG0680032075.01	MsG0780041482.01	0.811938	5.450852e-51	3.418965e-48
MsG0680032830.01	MsG0780041482.01	0.809858	1.537345e-50	9.127097e-48
MsG0680033392.01	MsG0780041482.01	0.810178	1.311384e-50	7.850846e-48
MsG0680033465.01	MsG0780041482.01	0.834841	2.373517e-56	2.850877e-53
MsG0680034064.01	MsG0780041482.01	0.809967	1.456210e-50	8.670368e-48
MsG0680034235.01	MsG0780041482.01	0.908327	1.930634e-81	3.566280e-77
MsG0680034445.01	MsG0780041482.01	0.827514	1.500513e-54	1.451730e-51
MsG0680034766.01	MsG0780041482.01	0.812161	4.873363e-51	3.075586e-48
MsG0680034767.01	MsG0780041482.01	0.871222	8.056401e-67	3.224455e-63
MsG0680034913.01	MsG0780041482.01	0.822841	1.909287e-53	1.616509e-50
MsG0680035216.01	MsG0780041482.01	0.830815	2.374495e-55	2.529656e-52
MsG0680035307.01	MsG0780041482.01	0.844051	9.602969e-59	1.531843e-55
MsG0680035580.01	MsG0780041482.01	0.802345	5.861752e-49	2.864714e-46
MsG0480018479.01	MsG0780041482.01	0.814558	1.448940e-51	9.754138e-49
MsG0480018584.01	MsG0780041482.01	0.814675	1.365579e-51	9.221530e-49
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MsG0780039369.01	MsG0780041482.01	0.843968	1.011173e-58	1.608602e-55
MsG0780039438.01	MsG0780041482.01	0.803991	2.675739e-49	1.363946e-46
MsG0780039439.01	MsG0780041482.01	0.839179	1.850096e-57	2.534573e-54
MsG0780039443.01	MsG0780041482.01	0.828116	1.075065e-54	1.058667e-51
MsG0780039717.01	MsG0780041482.01	0.856082	4.091531e-62	9.650636e-59
MsG0780039975.01	MsG0780041482.01	0.807310	5.380130e-50	2.986797e-47
MsG0780040176.01	MsG0780041482.01	0.815962	7.065636e-52	4.941788e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041482.01.T01	MTR_7g111900	96.532	173	2	3	1	172	1	170	1.49e-114	322
MsG0780041482.01.T01	MTR_7g103200	85.065	154	21	1	1	154	1	152	4.13e-92	265
MsG0780041482.01.T01	MTR_1g084200	71.233	146	42	0	1	146	1	146	4.19e-73	218
MsG0780041482.01.T01	MTR_2g019480	49.254	134	68	0	10	143	14	147	9.15e-49	155
MsG0780041482.01.T01	MTR_2g046150	44.375	160	88	1	2	161	6	164	3.73e-40	134
MsG0780041482.01.T01	MTR_4g122930	50.714	140	65	2	1	138	1	138	6.99e-39	130
MsG0780041482.01.T01	MTR_2g091210	45.528	123	67	0	17	139	12	134	1.06e-33	116
MsG0780041482.01.T01	MTR_2g091215	53.636	110	51	0	28	137	23	132	1.23e-32	114

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041482.01.T01	AT1G09310	62.222	180	55	2	1	168	1	179	1.00e-69	209
MsG0780041482.01.T01	AT1G56580	63.953	172	51	4	1	167	1	166	1.12e-68	206
MsG0780041482.01.T01	AT5G46230	47.692	130	68	0	12	141	14	143	4.01e-46	148
MsG0780041482.01.T01	AT4G24130	45.185	135	74	0	9	143	13	147	4.14e-39	130
MsG0780041482.01.T01	AT1G30020	43.571	140	77	1	13	150	15	154	8.60e-37	125
MsG0780041482.01.T01	AT5G49600	46.207	145	68	4	3	138	1	144	6.30e-35	120

Find 31 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATTTCTTTGAGAAGCTCTT+TGG	0.291146	7:+91445689	None:intergenic
TTCAATGGTAAAAGACCATT+TGG	0.295506	7:+91445660	None:intergenic
GTCACTGCTTACGTTGAAAA+TGG	0.305607	7:-91445522	MsG0780041482.01.T01:CDS
ATCACATTCAAAACACCTTC+TGG	0.305889	7:-91445405	MsG0780041482.01.T01:CDS
AACCCAAATCAAAAGCTCTT+TGG	0.308533	7:+91445470	None:intergenic
TCAATTTCAAAAGCAGAAAC+AGG	0.316797	7:+91445366	None:intergenic
TCCATGGTAAACCTCGGATT+TGG	0.319079	7:+91445734	None:intergenic
GTTGGTTACAACAGAGAAAC+AGG	0.372734	7:-91445624	MsG0780041482.01.T01:CDS
ACACACAAATTCGAAAAGAT+TGG	0.384478	7:-91445570	MsG0780041482.01.T01:CDS
ATCAAGTGGTGCTACTGTTA+AGG	0.417389	7:-91445328	MsG0780041482.01.T01:CDS
ACTGTTGCTGCTACTGCTGC+TGG	0.440092	7:-91445282	MsG0780041482.01.T01:CDS
ACTTCGGTAGCATAGGAAAC+AGG	0.457776	7:+91445543	None:intergenic
TATATTGATGATCCACCAAC+TGG	0.471274	7:-91445432	MsG0780041482.01.T01:CDS
CACACAAATTCGAAAAGATT+GGG	0.476488	7:-91445569	MsG0780041482.01.T01:CDS
TTGAAAGACATCACTGAAGT+TGG	0.485594	7:-91445642	MsG0780041482.01.T01:CDS
AAAGAAATCTCTCTCCCAAA+TGG	0.487795	7:-91445675	MsG0780041482.01.T01:CDS
TCAATGGTAAAAGACCATTT+GGG	0.506164	7:+91445661	None:intergenic
CCATGGAGACGAAATGTGTC+AGG	0.515719	7:-91445718	MsG0780041482.01.T01:CDS
ACTTCAGTGATGTCTTTCAA+TGG	0.520310	7:+91445645	None:intergenic
TACTGCTGCTGGTGTTAAAG+AGG	0.555141	7:-91445271	MsG0780041482.01.T01:CDS
CCTGACACATTTCGTCTCCA+TGG	0.557991	7:+91445718	None:intergenic
GAAGAGAAAGAGAAATCAAG+TGG	0.560001	7:-91445342	MsG0780041482.01.T01:CDS
TGTTAAGGAAGCTGCTAACA+AGG	0.566122	7:-91445313	MsG0780041482.01.T01:CDS
TTCGTCTCCATGGTAAACCT+CGG	0.581474	7:+91445728	None:intergenic
TTCAACGTAAGCAGTGACTT+CGG	0.602234	7:+91445527	None:intergenic
CAATTTCAAAAGCAGAAACA+GGG	0.604117	7:+91445367	None:intergenic
AGCAGTGACTTCGGTAGCAT+AGG	0.607903	7:+91445536	None:intergenic
TCCAAATCCGAGGTTTACCA+TGG	0.611352	7:-91445735	MsG0780041482.01.T01:CDS
CAACCCCAAAACGATGTCGT+TGG	0.618459	7:-91445775	None:intergenic
GGTAAGATCAAGAAACTGAA+CGG	0.640251	7:-91445501	MsG0780041482.01.T01:CDS
AGAAATCAAATCCAAATCCG+AGG	0.652928	7:-91445745	MsG0780041482.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ACACACAAATTCGAAAAGAT+TGG	-	Chr7:91445458-91445477	MsG0780041482.01.T01:CDS	30.0%
	CAATTTCAAAAGCAGAAACA+GGG	+	Chr7:91445664-91445683	None:intergenic	30.0%
	CACACAAATTCGAAAAGATT+GGG	-	Chr7:91445459-91445478	MsG0780041482.01.T01:CDS	30.0%
	TCAATGGTAAAAGACCATTT+GGG	+	Chr7:91445370-91445389	None:intergenic	30.0%
	TCAATTTCAAAAGCAGAAAC+AGG	+	Chr7:91445665-91445684	None:intergenic	30.0%
	TTCAATGGTAAAAGACCATT+TGG	+	Chr7:91445371-91445390	None:intergenic	30.0%
!	AAACTTCTAAAAAGTCCAGA+AGG	+	Chr7:91445641-91445660	None:intergenic	30.0%
!	TTGAATGTGATTTTACCAGT+TGG	+	Chr7:91445614-91445633	None:intergenic	30.0%
!!	AAACCAAAGAGCTTTTGATT+TGG	-	Chr7:91445555-91445574	MsG0780041482.01.T01:CDS	30.0%
!!!	AACCAAAGAGCTTTTGATTT+GGG	-	Chr7:91445556-91445575	MsG0780041482.01.T01:CDS	30.0%
	AAAGAAATCTCTCTCCCAAA+TGG	-	Chr7:91445353-91445372	MsG0780041482.01.T01:CDS	35.0%
	AACCCAAATCAAAAGCTCTT+TGG	+	Chr7:91445561-91445580	None:intergenic	35.0%
	ACTTCAGTGATGTCTTTCAA+TGG	+	Chr7:91445386-91445405	None:intergenic	35.0%
	AGAAATCAAATCCAAATCCG+AGG	-	Chr7:91445283-91445302	MsG0780041482.01.T01:CDS	35.0%
	ATCACATTCAAAACACCTTC+TGG	-	Chr7:91445623-91445642	MsG0780041482.01.T01:CDS	35.0%
	GAAGAGAAAGAGAAATCAAG+TGG	-	Chr7:91445686-91445705	MsG0780041482.01.T01:CDS	35.0%
	GGTAAGATCAAGAAACTGAA+CGG	-	Chr7:91445527-91445546	MsG0780041482.01.T01:CDS	35.0%
	TTGAAAGACATCACTGAAGT+TGG	-	Chr7:91445386-91445405	MsG0780041482.01.T01:CDS	35.0%
!	AATGTGATTTTACCAGTTGG+TGG	+	Chr7:91445611-91445630	None:intergenic	35.0%
!	GATTTCTTTGAGAAGCTCTT+TGG	+	Chr7:91445342-91445361	None:intergenic	35.0%
!	TATATTGATGATCCACCAAC+TGG	-	Chr7:91445596-91445615	MsG0780041482.01.T01:CDS	35.0%
!!!	ACAGAGAAACAGGTTTTGTT+TGG	-	Chr7:91445414-91445433	MsG0780041482.01.T01:CDS	35.0%
	GTCACTGCTTACGTTGAAAA+TGG	-	Chr7:91445506-91445525	MsG0780041482.01.T01:CDS	40.0%
	GTTGGTTACAACAGAGAAAC+AGG	-	Chr7:91445404-91445423	MsG0780041482.01.T01:CDS	40.0%
	TGTTAAGGAAGCTGCTAACA+AGG	-	Chr7:91445715-91445734	MsG0780041482.01.T01:CDS	40.0%
	TTCAACGTAAGCAGTGACTT+CGG	+	Chr7:91445504-91445523	None:intergenic	40.0%
!!	ATCAAGTGGTGCTACTGTTA+AGG	-	Chr7:91445700-91445719	MsG0780041482.01.T01:CDS	40.0%
	ACTTCGGTAGCATAGGAAAC+AGG	+	Chr7:91445488-91445507	None:intergenic	45.0%
	TCCAAATCCGAGGTTTACCA+TGG	-	Chr7:91445293-91445312	MsG0780041482.01.T01:CDS	45.0%
	TCCATGGTAAACCTCGGATT+TGG	+	Chr7:91445297-91445316	None:intergenic	45.0%
	TTCGTCTCCATGGTAAACCT+CGG	+	Chr7:91445303-91445322	None:intergenic	45.0%
!	TACTGCTGCTGGTGTTAAAG+AGG	-	Chr7:91445757-91445776	MsG0780041482.01.T01:CDS	45.0%
	AGCAGTGACTTCGGTAGCAT+AGG	+	Chr7:91445495-91445514	None:intergenic	50.0%
	CCATGGAGACGAAATGTGTC+AGG	-	Chr7:91445310-91445329	MsG0780041482.01.T01:CDS	50.0%
	CCTGACACATTTCGTCTCCA+TGG	+	Chr7:91445313-91445332	None:intergenic	50.0%
	ACTGTTGCTGCTACTGCTGC+TGG	-	Chr7:91445746-91445765	MsG0780041482.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	91445266	91445784	91445266	ID=MsG0780041482.01;Name=MsG0780041482.01
Chr7	mRNA	91445266	91445784	91445266	ID=MsG0780041482.01.T01;Parent=MsG0780041482.01;Name=MsG0780041482.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|172
Chr7	exon	91445266	91445784	91445266	ID=MsG0780041482.01.T01:exon:18596;Parent=MsG0780041482.01.T01
Chr7	CDS	91445266	91445784	91445266	ID=MsG0780041482.01.T01:cds;Parent=MsG0780041482.01.T01

Gene Sequence

>MsG0780041482.01.T01

ATGTCGTTGGTAACAGAAGAAATCAAATCCAAATCCGAGGTTTACCATGGAGACGAAATGTGTCAGGTGAAATCCAAAGAGCTTCTCAAAGAAATCTCTCTCCCAAATGGTCTTTTACCATTGAAAGACATCACTGAAGTTGGTTACAACAGAGAAACAGGTTTTGTTTGGCTGAAACAGAAGAAAAGCATAACACACAAATTCGAAAAGATTGGGAAACCTGTTTCCTATGCTACCGAAGTCACTGCTTACGTTGAAAATGGTAAGATCAAGAAACTGAACGGTGTTAAAACCAAAGAGCTTTTGATTTGGGTTACTTTGTGTGATATTTATATTGATGATCCACCAACTGGTAAAATCACATTCAAAACACCTTCTGGACTTTTTAGAAGTTTCCCTGTTTCTGCTTTTGAAATTGAAGAAGAGAAAGAGAAATCAAGTGGTGCTACTGTTAAGGAAGCTGCTAACAAGGTCAATGAAACTGTTGCTGCTACTGCTGCTGGTGTTAAAGAGGTCTAA

Protein sequence

>MsG0780041482.01.T01

MSLVTEEIKSKSEVYHGDEMCQVKSKELLKEISLPNGLLPLKDITEVGYNRETGFVWLKQKKSITHKFEKIGKPVSYATEVTAYVENGKIKKLNGVKTKELLIWVTLCDIYIDDPPTGKITFKTPSGLFRSFPVSAFEIEEEKEKSSGATVKEAANKVNETVAATAAGVKEV*