AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029194.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029194.01.T01 MTR_1g022345 73.993 596 79 7 1 526 54 643 0.0 820
MsG0580029194.01.T01 MTR_5g082570 100.000 69 0 0 458 526 580 648 7.25e-37 145
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029194.01.T01 AT3G28730 63.211 598 139 9 2 525 55 645 0.0 665

Find 121 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTAAGCCTGGAAAATTT+AGG 0.219977 5:-93459593 MsG0580029194.01.T01:CDS
ACCTCTACTCTTTACATCTT+TGG 0.219988 5:-93458418 MsG0580029194.01.T01:intron
ACAGTATTACGTGGCTTGTC+TGG 0.233775 5:-93459624 MsG0580029194.01.T01:CDS
CAGCTATTCCAAAGGTGTTT+TGG 0.237219 5:+93461642 None:intergenic
GGGTCTCCTACTGATGATTC+TGG 0.258546 5:-93458528 MsG0580029194.01.T01:CDS
GTAATAAGAGTGGGAGGTTT+AGG 0.273213 5:+93459483 None:intergenic
TAATCCTGGGATTTCATTTA+CGG 0.275475 5:-93458022 MsG0580029194.01.T01:CDS
TTTCTGTTAGCGGGCGCAAT+TGG 0.275567 5:-93461604 MsG0580029194.01.T01:CDS
AGGAAATATGCTGGCTTTCA+TGG 0.282409 5:-93461090 MsG0580029194.01.T01:CDS
GATGCTGTTGTTACATTTGA+TGG 0.292831 5:-93460568 MsG0580029194.01.T01:CDS
GGGTGTTGGAATTCGGTATA+TGG 0.303438 5:+93460761 None:intergenic
TGGGGAGAAGTTGATTTAAA+TGG 0.308241 5:-93461584 MsG0580029194.01.T01:intron
TTCTGTTAGCGGGCGCAATT+GGG 0.325415 5:-93461603 MsG0580029194.01.T01:CDS
ACACCAAGTTGATTACTCTT+TGG 0.336794 5:+93461925 None:intergenic
GGCTTGAAAATTATGCATTT+AGG 0.341853 5:-93459113 MsG0580029194.01.T01:CDS
GTCGAACTACACTGCTATAC+TGG 0.359472 5:+93460316 None:intergenic
CAGATTGGAGTTGTCGTATA+AGG 0.360980 5:-93459866 MsG0580029194.01.T01:intron
CAACCGATGAATATTGATTC+AGG 0.372802 5:-93457746 MsG0580029194.01.T01:CDS
CAAAATTACTTGGAGAGAAC+TGG 0.390368 5:-93457993 MsG0580029194.01.T01:CDS
ATACTGTGGTGAACACTTCA+TGG 0.393386 5:+93459640 None:intergenic
CAGTATTACGTGGCTTGTCT+GGG 0.395701 5:-93459623 MsG0580029194.01.T01:CDS
AACGAGTACCACAATTTGTA+TGG 0.395792 5:-93459235 MsG0580029194.01.T01:CDS
CTGTCATTCTTGCGGCTTCA+AGG 0.398065 5:-93460360 MsG0580029194.01.T01:CDS
TAAAATGTTACCTCGGTGTA+AGG 0.403709 5:+93460536 None:intergenic
ACAAACTGGGTGTTGGAATT+CGG 0.407573 5:+93460754 None:intergenic
ACGGATGTGGCAAAATTACT+TGG 0.423556 5:-93458003 MsG0580029194.01.T01:CDS
AATTCCAACACCCAGTTTGT+TGG 0.433634 5:-93460751 MsG0580029194.01.T01:CDS
ATCTCAGAAAGATTCGTTGA+TGG 0.433640 5:-93460794 MsG0580029194.01.T01:intron
AATATAAAGAAAGCTAATCC+TGG 0.438071 5:-93458036 MsG0580029194.01.T01:CDS
TTCTCTGAATATTACGAAAG+AGG 0.438473 5:+93459257 None:intergenic
ATTCTTGCGGCTTCAAGGAC+AGG 0.439827 5:-93460355 MsG0580029194.01.T01:CDS
TGAAAATTGCCCACCTGCTC+AGG 0.441127 5:-93460725 MsG0580029194.01.T01:intron
CTTGGTGTTCAGATCAAAGA+TGG 0.447302 5:-93461910 MsG0580029194.01.T01:CDS
AGCCACACCAGTAGTTGGTT+GGG 0.447410 5:+93459085 None:intergenic
GTCTCACAAACTAACCTTCA+AGG 0.456533 5:-93461029 MsG0580029194.01.T01:CDS
GGTCTCCTACTGATGATTCT+GGG 0.456976 5:-93458527 MsG0580029194.01.T01:CDS
TGAAGACTTCGTTGCCGAAA+AGG 0.457341 5:-93458559 MsG0580029194.01.T01:CDS
ATTCACTGGATTTCGTGATC+AGG 0.458777 5:-93461875 MsG0580029194.01.T01:intron
TGGGATTTCATTTACGGATG+TGG 0.460128 5:-93458016 MsG0580029194.01.T01:CDS
CACCTTTGGAATAGCTGTAA+AGG 0.461017 5:-93461636 MsG0580029194.01.T01:CDS
TTCCATGTGGATGACACAAC+TGG 0.462015 5:-93460984 MsG0580029194.01.T01:CDS
GGGGCCAAAGTTACTAAGCC+TGG 0.468481 5:-93459603 MsG0580029194.01.T01:CDS
GGGTTGTTCTACAAATTCAC+TGG 0.469635 5:-93461889 MsG0580029194.01.T01:CDS
ACCTGAACATGCAGTTCAAA+GGG 0.471466 5:-93459134 MsG0580029194.01.T01:intron
CCTCTTTCTCATCACCACTT+TGG 0.473171 5:+93458484 None:intergenic
TCATCTCTGAAAGCTGAAGA+TGG 0.473971 5:-93459543 MsG0580029194.01.T01:CDS
ACCTTAGCCACACCAGTAGT+TGG 0.481295 5:+93459080 None:intergenic
GAGGCATCACACGATAATAA+AGG 0.481517 5:+93458441 None:intergenic
GTTGCCGAAAAGGACGATGA+AGG 0.482808 5:-93458549 MsG0580029194.01.T01:CDS
TTCCATTTCAGGAAATATGC+TGG 0.483906 5:-93461099 MsG0580029194.01.T01:intron
TTATGTGGTTGAAAGTGAAT+TGG 0.487973 5:-93459926 MsG0580029194.01.T01:CDS
GAATCAATATTCATCGGTTG+TGG 0.489399 5:+93457749 None:intergenic
AGAAGCAACTTTCTGTTAGC+GGG 0.495842 5:-93461613 MsG0580029194.01.T01:CDS
GTGGCCGACGTTGGTGTTGG+AGG 0.496458 5:-93460595 MsG0580029194.01.T01:CDS
TGGTGTGGCTAAGGTTCTTG+AGG 0.498002 5:-93459072 MsG0580029194.01.T01:CDS
ATTCTATAGATATACCTCAT+TGG 0.500824 5:+93460959 None:intergenic
GGTGTGGCTAAGGTTCTTGA+GGG 0.503505 5:-93459071 MsG0580029194.01.T01:CDS
TATTACGAAAGAGGTGCTCT+TGG 0.505169 5:+93459266 None:intergenic
CTCTAAGTACAAAGACAGAT+TGG 0.506656 5:-93459881 MsG0580029194.01.T01:CDS
ATCACCAACAAACTGGGTGT+TGG 0.507629 5:+93460747 None:intergenic
ACCAACTACTGGTGTGGCTA+AGG 0.508426 5:-93459081 MsG0580029194.01.T01:CDS
AGCTTTCGAAGTGCCTTTAG+CGG 0.509555 5:-93461054 MsG0580029194.01.T01:CDS
GAGAAGCAACTTTCTGTTAG+CGG 0.514450 5:-93461614 MsG0580029194.01.T01:CDS
GTTTGTGAGACGTCCGCTAA+AGG 0.515987 5:+93461041 None:intergenic
CTTGAAGCCGCAAGAATGAC+AGG 0.517227 5:+93460361 None:intergenic
TTCTGACTAGATTGACTATG+TGG 0.520017 5:-93459357 MsG0580029194.01.T01:intron
AATATGCTGGCTTTCATGGT+TGG 0.520470 5:-93461086 MsG0580029194.01.T01:CDS
GTGAACAAACTCACCTGAGC+AGG 0.527575 5:+93460712 None:intergenic
CCAAAGTGGTGATGAGAAAG+AGG 0.530710 5:-93458484 MsG0580029194.01.T01:CDS
TAGCCACACCAGTAGTTGGT+TGG 0.530732 5:+93459084 None:intergenic
TACCTGAACATGCAGTTCAA+AGG 0.530797 5:-93459135 MsG0580029194.01.T01:intron
TGATAAAACCATACAAATTG+TGG 0.532500 5:+93459227 None:intergenic
TTTCCTGAATCAATATTCAT+CGG 0.535542 5:+93457743 None:intergenic
CTCCTTTACAGCTATTCCAA+AGG 0.535595 5:+93461634 None:intergenic
AACAAACTCACCTGAGCAGG+TGG 0.540462 5:+93460715 None:intergenic
GGAGATGCCCAACCAACTAC+TGG 0.540924 5:-93459092 MsG0580029194.01.T01:CDS
GAATTTGAGCGACATGCTGC+TGG 0.545421 5:-93459335 MsG0580029194.01.T01:CDS
TCTGTGGCCGACGTTGGTGT+TGG 0.546144 5:-93460598 MsG0580029194.01.T01:CDS
AATGAATCTGACAGTGCCTA+AGG 0.547696 5:-93457722 None:intergenic
AAATTTAGGAGTTGTCAAGA+TGG 0.550659 5:-93459579 MsG0580029194.01.T01:CDS
CACTCTTATTACTCATGAAG+AGG 0.552138 5:-93459472 MsG0580029194.01.T01:CDS
TTGCCGAAAAGGACGATGAA+GGG 0.553982 5:-93458548 MsG0580029194.01.T01:CDS
TTTCTGATGCGCTCAAGATG+TGG 0.559322 5:+93459026 None:intergenic
AGTTACACCTGTCATTCTTG+CGG 0.563102 5:-93460368 MsG0580029194.01.T01:CDS
ATATAAAGAAAGCTAATCCT+GGG 0.568398 5:-93458035 MsG0580029194.01.T01:CDS
AAAGAAGAAGCTCTTCTCAA+GGG 0.568660 5:+93459509 None:intergenic
TTTGAGCGACATGCTGCTGG+TGG 0.569661 5:-93459332 MsG0580029194.01.T01:CDS
CCGTAATAAAATAATGTCTG+TGG 0.570681 5:-93460614 MsG0580029194.01.T01:CDS
TCTCACAAACTAACCTTCAA+GGG 0.570778 5:-93461028 MsG0580029194.01.T01:CDS
CTCCAGTTGTGTCATCCACA+TGG 0.578099 5:+93460982 None:intergenic
GAAAGAAGAAGCTCTTCTCA+AGG 0.578564 5:+93459508 None:intergenic
TGAATGTACAGCTGAGGAGA+AGG 0.578829 5:-93457843 MsG0580029194.01.T01:intron
ATAGTTCGAAACTGATTATG+TGG 0.585231 5:-93459941 MsG0580029194.01.T01:intron
GAGCGCATCAGAAATGAAGC+TGG 0.599655 5:-93459017 MsG0580029194.01.T01:CDS
GTCTCCTACTGATGATTCTG+GGG 0.610889 5:-93458526 MsG0580029194.01.T01:CDS
ACCAAAGATGTAAAGAGTAG+AGG 0.615795 5:+93458417 None:intergenic
AAGAAGAAGCTCTTCTCAAG+GGG 0.618644 5:+93459510 None:intergenic
TCTGTTAGCGGGCGCAATTG+GGG 0.620357 5:-93461602 MsG0580029194.01.T01:CDS
TTGGTGTTCAGATCAAAGAT+GGG 0.623826 5:-93461909 MsG0580029194.01.T01:CDS
TCTTCATGAGTAATAAGAGT+GGG 0.630332 5:+93459474 None:intergenic
TGCCCAACCAACTACTGGTG+TGG 0.630935 5:-93459087 MsG0580029194.01.T01:CDS
GATTCTGATGCTAGCCAAAG+TGG 0.631437 5:-93458498 MsG0580029194.01.T01:CDS
CTCTTCATGAGTAATAAGAG+TGG 0.634693 5:+93459473 None:intergenic
ACATCCGTAAATGAAATCCC+AGG 0.636983 5:+93458018 None:intergenic
AGATGTAAAGAGTAGAGGTG+AGG 0.643691 5:+93458422 None:intergenic
AGTATTACGTGGCTTGTCTG+GGG 0.645525 5:-93459622 MsG0580029194.01.T01:CDS
ATAATGTCTGTGGCCGACGT+TGG 0.646831 5:-93460604 MsG0580029194.01.T01:CDS
TTGAGCGACATGCTGCTGGT+GGG 0.652007 5:-93459331 MsG0580029194.01.T01:CDS
TCATGAGTAATAAGAGTGGG+AGG 0.653278 5:+93459477 None:intergenic
GTTCCAAAGAGTAATCAACT+TGG 0.653285 5:-93461928 MsG0580029194.01.T01:CDS
TGACACAACTGGAGCCAATG+AGG 0.660429 5:-93460973 MsG0580029194.01.T01:intron
TCTGCCCCAGAATCATCAGT+AGG 0.661015 5:+93458522 None:intergenic
TTCACCTCCAACACCAACGT+CGG 0.664425 5:+93460591 None:intergenic
GTGTTCACCACAGTATTACG+TGG 0.675365 5:-93459633 MsG0580029194.01.T01:CDS
TGAGGAGAAGGAGCCATACG+AGG 0.695374 5:-93457831 MsG0580029194.01.T01:CDS
TGGTGAAGATGAAAGTGACG+AGG 0.704697 5:-93458997 MsG0580029194.01.T01:CDS
AGACAAGCCACGTAATACTG+TGG 0.714541 5:+93459626 None:intergenic
ACAAACTCACCTGAGCAGGT+GGG 0.719960 5:+93460716 None:intergenic
TGTGATCTTGGAGTTCCATG+TGG 0.743249 5:-93460997 MsG0580029194.01.T01:CDS
TGAAGATGAAAGTGACGAGG+AGG 0.754949 5:-93458994 MsG0580029194.01.T01:intron
GTATTGCAATCCTTACACCG+AGG 0.833639 5:-93460546 MsG0580029194.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATATCAAATATAGATT+AGG + Chr5:93460692-93460711 None:intergenic 10.0%
!! TTATGTTATATATATACCAA+TGG - Chr5:93461496-93461515 MsG0580029194.01.T01:intron 15.0%
!!! TTGCTTTTGTATATATTAAT+CGG - Chr5:93461058-93461077 MsG0580029194.01.T01:CDS 15.0%
!! AAATCAATAATCAACAGTTT+AGG + Chr5:93459823-93459842 None:intergenic 20.0%
!! AGAAATATCAACATAAGAAA+TGG + Chr5:93457961-93457980 None:intergenic 20.0%
!! AGATATAGATATTAATGACT+GGG - Chr5:93457915-93457934 MsG0580029194.01.T01:intron 20.0%
!! ATAGATAATAAACAATAGTC+TGG + Chr5:93460908-93460927 None:intergenic 20.0%
!! ATTTACAATTCAATAATCAG+GGG - Chr5:93459990-93460009 MsG0580029194.01.T01:intron 20.0%
!! CATTAATTTATATCCAACAT+TGG - Chr5:93460789-93460808 MsG0580029194.01.T01:CDS 20.0%
!! CATTTACAATTCAATAATCA+GGG - Chr5:93459989-93460008 MsG0580029194.01.T01:intron 20.0%
!! CTACATCAAATATATGTAAT+TGG + Chr5:93457833-93457852 None:intergenic 20.0%
!! GAAAAATATTATGCAAACTT+AGG + Chr5:93459012-93459031 None:intergenic 20.0%
!! GACTATCATATATTAAATAC+TGG - Chr5:93460231-93460250 MsG0580029194.01.T01:intron 20.0%
!! TAGATCATAAAATAAACCTT+AGG + Chr5:93459379-93459398 None:intergenic 20.0%
!! TCATTTACAATTCAATAATC+AGG - Chr5:93459988-93460007 MsG0580029194.01.T01:intron 20.0%
!!! CTTTTATAAAGTTCTAATAC+TGG - Chr5:93458515-93458534 MsG0580029194.01.T01:CDS 20.0%
! AAAATCTTCCTTATCCAAAT+TGG - Chr5:93458772-93458791 MsG0580029194.01.T01:intron 25.0%
! AATATAAAGAAAGCTAATCC+TGG - Chr5:93461622-93461641 MsG0580029194.01.T01:CDS 25.0%
! ATATAAAGAAAGCTAATCCT+GGG - Chr5:93461623-93461642 MsG0580029194.01.T01:CDS 25.0%
! ATATATGTAATTGGACATTC+AGG + Chr5:93457824-93457843 None:intergenic 25.0%
! ATTCTATAGATATACCTCAT+TGG + Chr5:93458702-93458721 None:intergenic 25.0%
! CAGATATAGATATTAATGAC+TGG - Chr5:93457914-93457933 MsG0580029194.01.T01:intron 25.0%
! CATATATTTGATGTAGACTA+AGG - Chr5:93457837-93457856 MsG0580029194.01.T01:intron 25.0%
! CGTTCTAATTTAAGTAAACA+AGG - Chr5:93460762-93460781 MsG0580029194.01.T01:CDS 25.0%
! GAAAAAACAGAAGAAGAAAA+AGG - Chr5:93461402-93461421 MsG0580029194.01.T01:intron 25.0%
! GATTGATTGATGTGTAAATT+TGG - Chr5:93459914-93459933 MsG0580029194.01.T01:CDS 25.0%
! TATCCTTATATTTCCATTTC+AGG - Chr5:93458548-93458567 MsG0580029194.01.T01:CDS 25.0%
! TATTTGATCTTTCTCTTGAA+AGG + Chr5:93459222-93459241 None:intergenic 25.0%
! TCTGTCAAAATGTTAATCAA+AGG + Chr5:93457898-93457917 None:intergenic 25.0%
! TGATAAAACCATACAAATTG+TGG + Chr5:93460434-93460453 None:intergenic 25.0%
! TTTCCTGAAATGGAAATATA+AGG + Chr5:93458554-93458573 None:intergenic 25.0%
! TTTCCTGAATCAATATTCAT+CGG + Chr5:93461918-93461937 None:intergenic 25.0%
!! ATTCATGTTCTTTTCTCAAA+TGG - Chr5:93461456-93461475 MsG0580029194.01.T01:intron 25.0%
!! CTTTTGTATATATTAATCGG+TGG - Chr5:93461061-93461080 MsG0580029194.01.T01:CDS 25.0%
!! GAGGTAACATTTTAAATACT+CGG - Chr5:93459131-93459150 MsG0580029194.01.T01:intron 25.0%
!! GAGTATTTAAAATGTTACCT+CGG + Chr5:93459132-93459151 None:intergenic 25.0%
!! TGCATAATATTTTTCGTATC+AGG - Chr5:93459017-93459036 MsG0580029194.01.T01:CDS 25.0%
!!! ACAATTTGTATGGTTTTATC+AGG - Chr5:93460433-93460452 MsG0580029194.01.T01:intron 25.0%
!!! CCACAGACATTATTTTATTA+CGG + Chr5:93459047-93459066 None:intergenic 25.0%
!!! TGTTGATATTTCTATTTTGC+AGG - Chr5:93457968-93457987 MsG0580029194.01.T01:intron 25.0%
AAACAATCAAAACCTCTAAC+AGG + Chr5:93460275-93460294 None:intergenic 30.0%
AAATTTAGGAGTTGTCAAGA+TGG - Chr5:93460079-93460098 MsG0580029194.01.T01:intron 30.0%
AATCTTCAGGATAAGATGAA+TGG + Chr5:93458346-93458365 None:intergenic 30.0%
ACAACTTAGTAACACATGAT+AGG + Chr5:93461782-93461801 None:intergenic 30.0%
ACCGAAAAAAATATTTCCAC+AGG + Chr5:93461030-93461049 None:intergenic 30.0%
ACTAGTTGCCAAGTAAAATT+TGG + Chr5:93460476-93460495 None:intergenic 30.0%
ATAGTTCGAAACTGATTATG+TGG - Chr5:93459717-93459736 MsG0580029194.01.T01:intron 30.0%
ATATGCAATACAGAAAACAC+AGG + Chr5:93460943-93460962 None:intergenic 30.0%
ATGTGTAAATTTGGTACTGT+GGG - Chr5:93459923-93459942 MsG0580029194.01.T01:CDS 30.0%
ATTACTGTTCAAGTCCAATT+TGG + Chr5:93458789-93458808 None:intergenic 30.0%
CATTGGAAAATATTTGAGCA+TGG - Chr5:93460806-93460825 MsG0580029194.01.T01:intron 30.0%
CCGAAAAAAATATTTCCACA+GGG + Chr5:93461029-93461048 None:intergenic 30.0%
CCGTAATAAAATAATGTCTG+TGG - Chr5:93459044-93459063 MsG0580029194.01.T01:CDS 30.0%
CTACTTACGAACAAAATATG+AGG + Chr5:93460727-93460746 None:intergenic 30.0%
GACTAAGGAATTCAAATATC+TGG - Chr5:93457852-93457871 MsG0580029194.01.T01:intron 30.0%
GGCTTGAAAATTATGCATTT+AGG - Chr5:93460545-93460564 MsG0580029194.01.T01:intron 30.0%
TAATCCTGGGATTTCATTTA+CGG - Chr5:93461636-93461655 MsG0580029194.01.T01:CDS 30.0%
TCTTCATGAGTAATAAGAGT+GGG + Chr5:93460187-93460206 None:intergenic 30.0%
TGCTTTCATTTCACTGATAT+TGG - Chr5:93459400-93459419 MsG0580029194.01.T01:intron 30.0%
TTACTAAGCCTGGAAAATTT+AGG - Chr5:93460065-93460084 MsG0580029194.01.T01:intron 30.0%
TTATAGACAATCTTGCAGAA+GGG + Chr5:93461559-93461578 None:intergenic 30.0%
TTATGTGGTTGAAAGTGAAT+TGG - Chr5:93459732-93459751 MsG0580029194.01.T01:intron 30.0%
TTCTCTGAATATTACGAAAG+AGG + Chr5:93460404-93460423 None:intergenic 30.0%
TTTGTTTATATACAACCCTG+AGG - Chr5:93459840-93459859 MsG0580029194.01.T01:intron 30.0%
! AAAGTTTGTCCTTTTCGAAT+AGG + Chr5:93459587-93459606 None:intergenic 30.0%
! AAGTTTGTCCTTTTCGAATA+GGG + Chr5:93459586-93459605 None:intergenic 30.0%
! AATTTTCATCACCAACAAAC+TGG + Chr5:93458921-93458940 None:intergenic 30.0%
! ATAGGATTTTATCAGTGATC+GGG + Chr5:93461764-93461783 None:intergenic 30.0%
! ATATACCAATGGTTTCGTTT+TGG - Chr5:93461507-93461526 MsG0580029194.01.T01:intron 30.0%
! ATTTTCATCACCAACAAACT+GGG + Chr5:93458920-93458939 None:intergenic 30.0%
! GATAGGATTTTATCAGTGAT+CGG + Chr5:93461765-93461784 None:intergenic 30.0%
! GCTCAAATATTTTCCAATGT+TGG + Chr5:93460805-93460824 None:intergenic 30.0%
! TATGCTGATATTTTCAGCAA+GGG - Chr5:93458283-93458302 MsG0580029194.01.T01:intron 30.0%
! TGTTGATAAAAAACGTTACG+AGG - Chr5:93461860-93461879 MsG0580029194.01.T01:intron 30.0%
!! AATGGTTTCGTTTTGGATTT+GGG - Chr5:93461514-93461533 MsG0580029194.01.T01:intron 30.0%
!! CAGATTTTAGTCTGATAAGT+AGG + Chr5:93460371-93460390 None:intergenic 30.0%
!! GGTTTCTGGTTTACTAATTT+AGG - Chr5:93459642-93459661 MsG0580029194.01.T01:CDS 30.0%
!!! AAAGGTGTTTTGGAAAAAAC+TGG + Chr5:93458009-93458028 None:intergenic 30.0%
!!! AGTTTTTTCCAAAACACCTT+TGG - Chr5:93458008-93458027 MsG0580029194.01.T01:CDS 30.0%
!!! ATTTGGGTGTGCATTTTTTA+TGG - Chr5:93458823-93458842 MsG0580029194.01.T01:intron 30.0%
!!! CCCTGTGGAAATATTTTTTT+CGG - Chr5:93461026-93461045 MsG0580029194.01.T01:CDS 30.0%
!!! TCGACTATTTTTACTTCCTA+AGG - Chr5:93459360-93459379 MsG0580029194.01.T01:intron 30.0%
AAAGAAGAAGCTCTTCTCAA+GGG + Chr5:93460152-93460171 None:intergenic 35.0%
AAAGAAGGATCTGTCTTCTA+AGG - Chr5:93461316-93461335 MsG0580029194.01.T01:intron 35.0%
AACAAACAAGAATGAGAGGA+AGG + Chr5:93458424-93458443 None:intergenic 35.0%
AACGAGTACCACAATTTGTA+TGG - Chr5:93460423-93460442 MsG0580029194.01.T01:intron 35.0%
AATCGGTGGAAAATATCTAC+AGG - Chr5:93461075-93461094 MsG0580029194.01.T01:CDS 35.0%
ACCAAAGATGTAAAGAGTAG+AGG + Chr5:93461244-93461263 None:intergenic 35.0%
ACCTCTACTCTTTACATCTT+TGG - Chr5:93461240-93461259 MsG0580029194.01.T01:intron 35.0%
ACGTAAACATCACAAGAACA+TGG - Chr5:93458260-93458279 MsG0580029194.01.T01:intron 35.0%
AGGGAAAAATGATGTGATCT+TGG - Chr5:93458649-93458668 MsG0580029194.01.T01:intron 35.0%
ATAGTTGTGTGCATTTGTTC+TGG - Chr5:93460967-93460986 MsG0580029194.01.T01:intron 35.0%
ATCTCAGAAAGATTCGTTGA+TGG - Chr5:93458864-93458883 MsG0580029194.01.T01:intron 35.0%
ATGCACACTACTATGTCTTA+TGG - Chr5:93460996-93461015 MsG0580029194.01.T01:CDS 35.0%
ATGTAATTGGACATTCAGGA+GGG + Chr5:93457820-93457839 None:intergenic 35.0%
ATTACCTGCATCACAATATG+AGG + Chr5:93459614-93459633 None:intergenic 35.0%
ATTGGACTTGAACAGTAATG+TGG - Chr5:93458790-93458809 MsG0580029194.01.T01:intron 35.0%
CAAAATTACTTGGAGAGAAC+TGG - Chr5:93461665-93461684 MsG0580029194.01.T01:CDS 35.0%
CAAATCCAAAACGAAACCAT+TGG + Chr5:93461515-93461534 None:intergenic 35.0%
CACTCTTATTACTCATGAAG+AGG - Chr5:93460186-93460205 MsG0580029194.01.T01:intron 35.0%
CCAAGTAAAATTTGGCAATG+AGG + Chr5:93460468-93460487 None:intergenic 35.0%
CTCTAAGTACAAAGACAGAT+TGG - Chr5:93459777-93459796 MsG0580029194.01.T01:intron 35.0%
CTCTTCATGAGTAATAAGAG+TGG + Chr5:93460188-93460207 None:intergenic 35.0%
CTGAAAATTGGCCATCATTA+AGG + Chr5:93461277-93461296 None:intergenic 35.0%
CTGGAAAAAAATGTCAGGTA+TGG - Chr5:93461684-93461703 MsG0580029194.01.T01:intron 35.0%
GAGAACTGGAAAAAAATGTC+AGG - Chr5:93461679-93461698 MsG0580029194.01.T01:intron 35.0%
GATGCTGTTGTTACATTTGA+TGG - Chr5:93459090-93459109 MsG0580029194.01.T01:CDS 35.0%
GATGTGTAAATTTGGTACTG+TGG - Chr5:93459922-93459941 MsG0580029194.01.T01:CDS 35.0%
GCAAGATTGTCTATAACCAT+TGG - Chr5:93461563-93461582 MsG0580029194.01.T01:intron 35.0%
GGAATGACATTATGCGAAAA+TGG + Chr5:93461743-93461762 None:intergenic 35.0%
GTTATAGACAATCTTGCAGA+AGG + Chr5:93461560-93461579 None:intergenic 35.0%
GTTCAAGTCCAATTTGGATA+AGG + Chr5:93458783-93458802 None:intergenic 35.0%
GTTCCAAAGAGTAATCAACT+TGG - Chr5:93457730-93457749 MsG0580029194.01.T01:CDS 35.0%
TATGTAATTGGACATTCAGG+AGG + Chr5:93457821-93457840 None:intergenic 35.0%
TATTCCTGACACCTTAATGA+TGG - Chr5:93461263-93461282 MsG0580029194.01.T01:intron 35.0%
TCAAAAGATGCAGATGAAGA+TGG - Chr5:93461373-93461392 MsG0580029194.01.T01:intron 35.0%
TCATCTTATCCTGAAGATTG+TGG - Chr5:93458347-93458366 MsG0580029194.01.T01:intron 35.0%
TCTCACAAACTAACCTTCAA+GGG - Chr5:93458630-93458649 MsG0580029194.01.T01:intron 35.0%
TGATGCAGGTAATTTCTCAT+GGG - Chr5:93459621-93459640 MsG0580029194.01.T01:CDS 35.0%
TTAAGATTGATGCTCTTCTC+TGG - Chr5:93459466-93459485 MsG0580029194.01.T01:CDS 35.0%
TTAATGACTGGGACTTAGAT+TGG - Chr5:93457926-93457945 MsG0580029194.01.T01:intron 35.0%
TTACCTGCATCACAATATGA+GGG + Chr5:93459613-93459632 None:intergenic 35.0%
TTAGAAGACAGATCCTTCTT+TGG + Chr5:93461317-93461336 None:intergenic 35.0%
TTCCATTTCAGGAAATATGC+TGG - Chr5:93458559-93458578 MsG0580029194.01.T01:CDS 35.0%
TTCTGACTAGATTGACTATG+TGG - Chr5:93460301-93460320 MsG0580029194.01.T01:CDS 35.0%
TTGGACTTGAACAGTAATGT+GGG - Chr5:93458791-93458810 MsG0580029194.01.T01:intron 35.0%
TTTCTCAAATGGAAAGAGAG+TGG - Chr5:93461467-93461486 MsG0580029194.01.T01:intron 35.0%
! AAATTTGTGTTACTCTGCAG+GGG - Chr5:93459253-93459272 MsG0580029194.01.T01:CDS 35.0%
! AGAAATTTGTGTTACTCTGC+AGG - Chr5:93459251-93459270 MsG0580029194.01.T01:CDS 35.0%
! AGCGTTTGAAATTTCTCCAA+TGG + Chr5:93461582-93461601 None:intergenic 35.0%
! AGTTTGTCCTTTTCGAATAG+GGG + Chr5:93459585-93459604 None:intergenic 35.0%
! ATGCTGATATTTTCAGCAAG+GGG - Chr5:93458284-93458303 MsG0580029194.01.T01:intron 35.0%
! CCTCATTGCCAAATTTTACT+TGG - Chr5:93460465-93460484 MsG0580029194.01.T01:intron 35.0%
! CTGAAGATTGTGGTTTTCTT+GGG - Chr5:93458357-93458376 MsG0580029194.01.T01:intron 35.0%
! GAAATTTGTGTTACTCTGCA+GGG - Chr5:93459252-93459271 MsG0580029194.01.T01:CDS 35.0%
! GAATCAATATTCATCGGTTG+TGG + Chr5:93461912-93461931 None:intergenic 35.0%
! GTATGCTGATATTTTCAGCA+AGG - Chr5:93458282-93458301 MsG0580029194.01.T01:intron 35.0%
! TAAAATGTTACCTCGGTGTA+AGG + Chr5:93459125-93459144 None:intergenic 35.0%
! TGAAGATTGTGGTTTTCTTG+GGG - Chr5:93458358-93458377 MsG0580029194.01.T01:intron 35.0%
! TGACAACTCCTAAATTTTCC+AGG + Chr5:93460076-93460095 None:intergenic 35.0%
! TGGGGAGAAGTTGATTTAAA+TGG - Chr5:93458074-93458093 MsG0580029194.01.T01:intron 35.0%
! TTGGTGTTCAGATCAAAGAT+GGG - Chr5:93457749-93457768 MsG0580029194.01.T01:CDS 35.0%
! TTTGGCAGGTTTCTGAAAAT+TGG + Chr5:93461289-93461308 None:intergenic 35.0%
! TTTTCCAGGCTTAGTAACTT+TGG + Chr5:93460062-93460081 None:intergenic 35.0%
!! ACACCAAGTTGATTACTCTT+TGG + Chr5:93457736-93457755 None:intergenic 35.0%
!! AGAGAAGAGCATCAATCTTA+AGG + Chr5:93459467-93459486 None:intergenic 35.0%
!! CAACCGATGAATATTGATTC+AGG - Chr5:93461912-93461931 MsG0580029194.01.T01:CDS 35.0%
!! CAATGGTTTCGTTTTGGATT+TGG - Chr5:93461513-93461532 MsG0580029194.01.T01:intron 35.0%
!! TCACATCATTTTTCCCTTGA+AGG + Chr5:93458646-93458665 None:intergenic 35.0%
!!! GATCCTTCTTTGGTTCTTTT+TGG + Chr5:93461307-93461326 None:intergenic 35.0%
AAGAAGAAGCTCTTCTCAAG+GGG + Chr5:93460151-93460170 None:intergenic 40.0%
AATTCCAACACCCAGTTTGT+TGG - Chr5:93458907-93458926 MsG0580029194.01.T01:intron 40.0%
ACACTACTATGTCTTATGGC+AGG - Chr5:93461000-93461019 MsG0580029194.01.T01:CDS 40.0%
ACATCCGTAAATGAAATCCC+AGG + Chr5:93461643-93461662 None:intergenic 40.0%
ACCTGAACATGCAGTTCAAA+GGG - Chr5:93460524-93460543 MsG0580029194.01.T01:intron 40.0%
ACGGATGTGGCAAAATTACT+TGG - Chr5:93461655-93461674 MsG0580029194.01.T01:CDS 40.0%
AGAAGCAACTTTCTGTTAGC+GGG - Chr5:93458045-93458064 MsG0580029194.01.T01:intron 40.0%
AGATGTAAAGAGTAGAGGTG+AGG + Chr5:93461239-93461258 None:intergenic 40.0%
AGCCAGCATATTTCCTGAAA+TGG + Chr5:93458564-93458583 None:intergenic 40.0%
AGTTACACCTGTCATTCTTG+CGG - Chr5:93459290-93459309 MsG0580029194.01.T01:CDS 40.0%
ATACTGTGGTGAACACTTCA+TGG + Chr5:93460021-93460040 None:intergenic 40.0%
ATGAAGAGAAAGACAGCATG+TGG + Chr5:93458459-93458478 None:intergenic 40.0%
ATTCACTGGATTTCGTGATC+AGG - Chr5:93457783-93457802 MsG0580029194.01.T01:CDS 40.0%
CACTACTATGTCTTATGGCA+GGG - Chr5:93461001-93461020 MsG0580029194.01.T01:CDS 40.0%
CAGATTGGAGTTGTCGTATA+AGG - Chr5:93459792-93459811 MsG0580029194.01.T01:intron 40.0%
CATCAATCTTAAGGCATGGT+TGG + Chr5:93459458-93459477 None:intergenic 40.0%
CATTTCTGTGTTGCATTCAC+AGG - Chr5:93460862-93460881 MsG0580029194.01.T01:intron 40.0%
CCAAGAAAACCACAATCTTC+AGG + Chr5:93458359-93458378 None:intergenic 40.0%
CTCCTTTACAGCTATTCCAA+AGG + Chr5:93458027-93458046 None:intergenic 40.0%
CTGCCAAAAAGAACCAAAGA+AGG - Chr5:93461301-93461320 MsG0580029194.01.T01:intron 40.0%
GAAAACACAGGAAAGCGAAA+AGG + Chr5:93460931-93460950 None:intergenic 40.0%
GAAAGAAGAAGCTCTTCTCA+AGG + Chr5:93460153-93460172 None:intergenic 40.0%
GAGAAGCAACTTTCTGTTAG+CGG - Chr5:93458044-93458063 MsG0580029194.01.T01:intron 40.0%
GGGTTGTTCTACAAATTCAC+TGG - Chr5:93457769-93457788 MsG0580029194.01.T01:CDS 40.0%
GGTAATTTCTCATGGGTTTC+TGG - Chr5:93459628-93459647 MsG0580029194.01.T01:CDS 40.0%
GTAATAAGAGTGGGAGGTTT+AGG + Chr5:93460178-93460197 None:intergenic 40.0%
GTCTCACAAACTAACCTTCA+AGG - Chr5:93458629-93458648 MsG0580029194.01.T01:intron 40.0%
GTGATGCAGGTAATTTCTCA+TGG - Chr5:93459620-93459639 MsG0580029194.01.T01:CDS 40.0%
TACCTGAACATGCAGTTCAA+AGG - Chr5:93460523-93460542 MsG0580029194.01.T01:intron 40.0%
TCATGAGTAATAAGAGTGGG+AGG + Chr5:93460184-93460203 None:intergenic 40.0%
TGCATGATATCACCTGTTAG+AGG - Chr5:93460260-93460279 MsG0580029194.01.T01:intron 40.0%
TGGCAACAAACAAGAATGAG+AGG + Chr5:93458428-93458447 None:intergenic 40.0%
TGGGATTTCATTTACGGATG+TGG - Chr5:93461642-93461661 MsG0580029194.01.T01:CDS 40.0%
TGTAATTGGACATTCAGGAG+GGG + Chr5:93457819-93457838 None:intergenic 40.0%
TTGAACTGCATGTTCAGGTA+AGG + Chr5:93460523-93460542 None:intergenic 40.0%
! AATGTGGGCTGTGGTTAATT+TGG - Chr5:93458806-93458825 MsG0580029194.01.T01:intron 40.0%
! AGAGCATCAATCTTAAGGCA+TGG + Chr5:93459462-93459481 None:intergenic 40.0%
! ATGTGGGCTGTGGTTAATTT+GGG - Chr5:93458807-93458826 MsG0580029194.01.T01:intron 40.0%
! ATTGTGGTTTTCTTGGGGTT+GGG - Chr5:93458363-93458382 MsG0580029194.01.T01:intron 40.0%
! CCTGAAGATTGTGGTTTTCT+TGG - Chr5:93458356-93458375 MsG0580029194.01.T01:intron 40.0%
! CTAATAACGACGAAGGTATG+TGG + Chr5:93459555-93459574 None:intergenic 40.0%
! GAAAGATGCAAAGCATCAAG+AGG + Chr5:93458148-93458167 None:intergenic 40.0%
! GAGGCATCACACGATAATAA+AGG + Chr5:93461220-93461239 None:intergenic 40.0%
! GTTTGTCCTTTTCGAATAGG+GGG + Chr5:93459584-93459603 None:intergenic 40.0%
! TCATCTCTGAAAGCTGAAGA+TGG - Chr5:93460115-93460134 MsG0580029194.01.T01:intron 40.0%
!! AATATGCTGGCTTTCATGGT+TGG - Chr5:93458572-93458591 MsG0580029194.01.T01:intron 40.0%
!! ACAAACTGGGTGTTGGAATT+CGG + Chr5:93458907-93458926 None:intergenic 40.0%
!! AGGAAATATGCTGGCTTTCA+TGG - Chr5:93458568-93458587 MsG0580029194.01.T01:intron 40.0%
!! CACCTTTGGAATAGCTGTAA+AGG - Chr5:93458022-93458041 MsG0580029194.01.T01:CDS 40.0%
!! CTTGGTGTTCAGATCAAAGA+TGG - Chr5:93457748-93457767 MsG0580029194.01.T01:CDS 40.0%
!! TATTACGAAAGAGGTGCTCT+TGG + Chr5:93460395-93460414 None:intergenic 40.0%
!!! CAGCTATTCCAAAGGTGTTT+TGG + Chr5:93458019-93458038 None:intergenic 40.0%
!!! CTTCTTTGGTTCTTTTTGGC+AGG + Chr5:93461303-93461322 None:intergenic 40.0%
AATCCAGACATTCCCCTCTT+GGG + Chr5:93461439-93461458 None:intergenic 45.0%
AGACAAGCCACGTAATACTG+TGG + Chr5:93460035-93460054 None:intergenic 45.0%
AGTTTGTAACAGCTTGCAGC+TGG - Chr5:93458743-93458762 MsG0580029194.01.T01:intron 45.0%
ATCACCAACAAACTGGGTGT+TGG + Chr5:93458914-93458933 None:intergenic 45.0%
CCTCTTTCTCATCACCACTT+TGG + Chr5:93461177-93461196 None:intergenic 45.0%
GATACATACAGCCAGTTGAC+AGG + Chr5:93459518-93459537 None:intergenic 45.0%
GATTCTGATGCTAGCCAAAG+TGG - Chr5:93461160-93461179 MsG0580029194.01.T01:intron 45.0%
GGTCTCCTACTGATGATTCT+GGG - Chr5:93461131-93461150 MsG0580029194.01.T01:intron 45.0%
GTACCCTCATATTGTGATGC+AGG - Chr5:93459607-93459626 MsG0580029194.01.T01:CDS 45.0%
GTATTGCAATCCTTACACCG+AGG - Chr5:93459112-93459131 MsG0580029194.01.T01:CDS 45.0%
GTCGAACTACACTGCTATAC+TGG + Chr5:93459345-93459364 None:intergenic 45.0%
GTCGAGACTAATAACGACGA+AGG + Chr5:93459562-93459581 None:intergenic 45.0%
GTCTCCTACTGATGATTCTG+GGG - Chr5:93461132-93461151 MsG0580029194.01.T01:intron 45.0%
GTGTGTTGAATGTACAGCTG+AGG - Chr5:93461809-93461828 MsG0580029194.01.T01:intron 45.0%
GTGTTCACCACAGTATTACG+TGG - Chr5:93460025-93460044 MsG0580029194.01.T01:intron 45.0%
TGAAGACTTCGTTGCCGAAA+AGG - Chr5:93461099-93461118 MsG0580029194.01.T01:intron 45.0%
TGAAGATGAAAGTGACGAGG+AGG - Chr5:93460664-93460683 MsG0580029194.01.T01:intron 45.0%
TGAATGTACAGCTGAGGAGA+AGG - Chr5:93461815-93461834 MsG0580029194.01.T01:intron 45.0%
TGACAACTTCTCCTGTCAAC+TGG - Chr5:93459504-93459523 MsG0580029194.01.T01:CDS 45.0%
TGGTGAAGATGAAAGTGACG+AGG - Chr5:93460661-93460680 MsG0580029194.01.T01:intron 45.0%
TGTGATCTTGGAGTTCCATG+TGG - Chr5:93458661-93458680 MsG0580029194.01.T01:intron 45.0%
TTCCATGTGGATGACACAAC+TGG - Chr5:93458674-93458693 MsG0580029194.01.T01:intron 45.0%
TTGCCGAAAAGGACGATGAA+GGG - Chr5:93461110-93461129 MsG0580029194.01.T01:intron 45.0%
TTTCTGATGCGCTCAAGATG+TGG + Chr5:93460635-93460654 None:intergenic 45.0%
! ACAGTATTACGTGGCTTGTC+TGG - Chr5:93460034-93460053 MsG0580029194.01.T01:intron 45.0%
! AGACCCTTCATCGTCCTTTT+CGG + Chr5:93461116-93461135 None:intergenic 45.0%
! AGCAGAGAGAGCTTGTTTGA+TGG - Chr5:93458479-93458498 MsG0580029194.01.T01:CDS 45.0%
! AGCTTTCGAAGTGCCTTTAG+CGG - Chr5:93458604-93458623 MsG0580029194.01.T01:intron 45.0%
! AGTATTACGTGGCTTGTCTG+GGG - Chr5:93460036-93460055 MsG0580029194.01.T01:intron 45.0%
! ATTTTCCCAAGCATCCCTCA+AGG + Chr5:93459873-93459892 None:intergenic 45.0%
! CAGTATTACGTGGCTTGTCT+GGG - Chr5:93460035-93460054 MsG0580029194.01.T01:intron 45.0%
! CCAAAGTGGTGATGAGAAAG+AGG - Chr5:93461174-93461193 MsG0580029194.01.T01:intron 45.0%
! GATTGTGGTTTTCTTGGGGT+TGG - Chr5:93458362-93458381 MsG0580029194.01.T01:intron 45.0%
! TTGAACAGTAATGTGGGCTG+TGG - Chr5:93458797-93458816 MsG0580029194.01.T01:intron 45.0%
! TTGGCCATCATTAAGGTGTC+AGG + Chr5:93461270-93461289 None:intergenic 45.0%
! TTGTGGTTTTCTTGGGGTTG+GGG - Chr5:93458364-93458383 MsG0580029194.01.T01:intron 45.0%
!! AAGGTCCTTTTTGAGAAGCC+AGG + Chr5:93458405-93458424 None:intergenic 45.0%
!! GGGTGTTGGAATTCGGTATA+TGG + Chr5:93458900-93458919 None:intergenic 45.0%
!! TCGTTTTGGATTTGGGTGTG+TGG - Chr5:93461521-93461540 MsG0580029194.01.T01:intron 45.0%
AACAAACTCACCTGAGCAGG+TGG + Chr5:93458946-93458965 None:intergenic 50.0%
ACAAACTCACCTGAGCAGGT+GGG + Chr5:93458945-93458964 None:intergenic 50.0%
ACCAACTACTGGTGTGGCTA+AGG - Chr5:93460577-93460596 MsG0580029194.01.T01:CDS 50.0%
ACCTTAGCCACACCAGTAGT+TGG + Chr5:93460581-93460600 None:intergenic 50.0%
AGAGAAAGACAGCATGTGGC+TGG + Chr5:93458455-93458474 None:intergenic 50.0%
AGCCACACCAGTAGTTGGTT+GGG + Chr5:93460576-93460595 None:intergenic 50.0%
AGGATCCAAATGCACCCAAG+AGG - Chr5:93461422-93461441 MsG0580029194.01.T01:intron 50.0%
ATAATGTCTGTGGCCGACGT+TGG - Chr5:93459054-93459073 MsG0580029194.01.T01:CDS 50.0%
ATTCCCCTCTTGGGTGCATT+TGG + Chr5:93461430-93461449 None:intergenic 50.0%
ATTCTTGCGGCTTCAAGGAC+AGG - Chr5:93459303-93459322 MsG0580029194.01.T01:CDS 50.0%
CTCCAGTTGTGTCATCCACA+TGG + Chr5:93458679-93458698 None:intergenic 50.0%
CTGTCATTCTTGCGGCTTCA+AGG - Chr5:93459298-93459317 MsG0580029194.01.T01:CDS 50.0%
CTGTTCCTTGAGGGATGCTT+GGG - Chr5:93459865-93459884 MsG0580029194.01.T01:intron 50.0%
CTTGAAGCCGCAAGAATGAC+AGG + Chr5:93459300-93459319 None:intergenic 50.0%
GAATCCAGACATTCCCCTCT+TGG + Chr5:93461440-93461459 None:intergenic 50.0%
GAATTTGAGCGACATGCTGC+TGG - Chr5:93460323-93460342 MsG0580029194.01.T01:CDS 50.0%
GAGCGCATCAGAAATGAAGC+TGG - Chr5:93460641-93460660 MsG0580029194.01.T01:intron 50.0%
GATCCAAATGCACCCAAGAG+GGG - Chr5:93461424-93461443 MsG0580029194.01.T01:intron 50.0%
GCCCTTTGAACTGCATGTTC+AGG + Chr5:93460528-93460547 None:intergenic 50.0%
GGATCCAAATGCACCCAAGA+GGG - Chr5:93461423-93461442 MsG0580029194.01.T01:intron 50.0%
GGGTCTCCTACTGATGATTC+TGG - Chr5:93461130-93461149 MsG0580029194.01.T01:intron 50.0%
GGTGTGGCTAAGGTTCTTGA+GGG - Chr5:93460587-93460606 MsG0580029194.01.T01:CDS 50.0%
GTGAACAAACTCACCTGAGC+AGG + Chr5:93458949-93458968 None:intergenic 50.0%
GTTCGCCTGGCTTCTCAAAA+AGG - Chr5:93458397-93458416 MsG0580029194.01.T01:intron 50.0%
GTTGCCGAAAAGGACGATGA+AGG - Chr5:93461109-93461128 MsG0580029194.01.T01:intron 50.0%
GTTTGTGAGACGTCCGCTAA+AGG + Chr5:93458620-93458639 None:intergenic 50.0%
TAGCCACACCAGTAGTTGGT+TGG + Chr5:93460577-93460596 None:intergenic 50.0%
TCTCGACCCCCTATTCGAAA+AGG - Chr5:93459575-93459594 MsG0580029194.01.T01:CDS 50.0%
TCTGCCCCAGAATCATCAGT+AGG + Chr5:93461139-93461158 None:intergenic 50.0%
TGAAAATTGCCCACCTGCTC+AGG - Chr5:93458933-93458952 MsG0580029194.01.T01:intron 50.0%
TGACACAACTGGAGCCAATG+AGG - Chr5:93458685-93458704 MsG0580029194.01.T01:intron 50.0%
TGGTGTGGCTAAGGTTCTTG+AGG - Chr5:93460586-93460605 MsG0580029194.01.T01:CDS 50.0%
TTCACCTCCAACACCAACGT+CGG + Chr5:93459070-93459089 None:intergenic 50.0%
! ACACGAGCTTTTGCCTCGTA+TGG + Chr5:93461843-93461862 None:intergenic 50.0%
! CTCAGGTGAGTTTGTTCACG+AGG - Chr5:93458950-93458969 MsG0580029194.01.T01:intron 50.0%
! TTCTGTTAGCGGGCGCAATT+GGG - Chr5:93458055-93458074 MsG0580029194.01.T01:intron 50.0%
! TTTCTGTTAGCGGGCGCAAT+TGG - Chr5:93458054-93458073 MsG0580029194.01.T01:intron 50.0%
! TTTTCTTGGGGTTGGGGTAG+AGG - Chr5:93458370-93458389 MsG0580029194.01.T01:intron 50.0%
CCTCAAGGAACAGCACCTCA+GGG + Chr5:93459858-93459877 None:intergenic 55.0%
GCTGTTCCTTGAGGGATGCT+TGG - Chr5:93459864-93459883 MsG0580029194.01.T01:intron 55.0%
GGAGATGCCCAACCAACTAC+TGG - Chr5:93460566-93460585 MsG0580029194.01.T01:CDS 55.0%
GGGGCCAAAGTTACTAAGCC+TGG - Chr5:93460055-93460074 MsG0580029194.01.T01:intron 55.0%
TCTTATGGCAGGGTTCCCTG+TGG - Chr5:93461011-93461030 MsG0580029194.01.T01:CDS 55.0%
TGAGGAGAAGGAGCCATACG+AGG - Chr5:93461827-93461846 MsG0580029194.01.T01:intron 55.0%
TGCCCAACCAACTACTGGTG+TGG - Chr5:93460571-93460590 MsG0580029194.01.T01:CDS 55.0%
TTGAGCGACATGCTGCTGGT+GGG - Chr5:93460327-93460346 MsG0580029194.01.T01:CDS 55.0%
TTTGAGCGACATGCTGCTGG+TGG - Chr5:93460326-93460345 MsG0580029194.01.T01:CDS 55.0%
! TCTGTTAGCGGGCGCAATTG+GGG - Chr5:93458056-93458075 MsG0580029194.01.T01:intron 55.0%
!! CCTGAGGTGCTGTTCCTTGA+GGG - Chr5:93459856-93459875 MsG0580029194.01.T01:intron 55.0%
CCCTCAAGGAACAGCACCTC+AGG + Chr5:93459859-93459878 None:intergenic 60.0%
CTTGGGGTTGGGGTAGAGGT+GGG - Chr5:93458374-93458393 MsG0580029194.01.T01:intron 60.0%
GACAGCATGTGGCTGGCAAG+TGG + Chr5:93458448-93458467 None:intergenic 60.0%
GCACCCAAGAGGGGAATGTC+TGG - Chr5:93461433-93461452 MsG0580029194.01.T01:intron 60.0%
TCTGTGGCCGACGTTGGTGT+TGG - Chr5:93459060-93459079 MsG0580029194.01.T01:CDS 60.0%
TCTTGGGGTTGGGGTAGAGG+TGG - Chr5:93458373-93458392 MsG0580029194.01.T01:intron 60.0%
TTGGGGTTGGGGTAGAGGTG+GGG - Chr5:93458375-93458394 MsG0580029194.01.T01:intron 60.0%
!! CCCTGAGGTGCTGTTCCTTG+AGG - Chr5:93459855-93459874 MsG0580029194.01.T01:intron 60.0%
!! GTGGCCGACGTTGGTGTTGG+AGG - Chr5:93459063-93459082 MsG0580029194.01.T01:CDS 65.0%
GGGTAGAGGTGGGGTTCGCC+TGG - Chr5:93458384-93458403 MsG0580029194.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 93457724 93461956 93457724 ID=MsG0580029194.01;Name=MsG0580029194.01
Chr5 mRNA 93457724 93461956 93457724 ID=MsG0580029194.01.T01;Parent=MsG0580029194.01;Name=MsG0580029194.01.T01;_AED=0.44;_eAED=0.45;_QI=0|0|0|1|1|1|13|0|526
Chr5 exon 93461876 93461956 93461876 ID=MsG0580029194.01.T01:exon:18047;Parent=MsG0580029194.01.T01
Chr5 exon 93461585 93461690 93461585 ID=MsG0580029194.01.T01:exon:18046;Parent=MsG0580029194.01.T01
Chr5 exon 93460974 93461110 93460974 ID=MsG0580029194.01.T01:exon:18045;Parent=MsG0580029194.01.T01
Chr5 exon 93460726 93460809 93460726 ID=MsG0580029194.01.T01:exon:18044;Parent=MsG0580029194.01.T01
Chr5 exon 93460547 93460641 93460547 ID=MsG0580029194.01.T01:exon:18043;Parent=MsG0580029194.01.T01
Chr5 exon 93460299 93460407 93460299 ID=MsG0580029194.01.T01:exon:18042;Parent=MsG0580029194.01.T01
Chr5 exon 93459867 93459959 93459867 ID=MsG0580029194.01.T01:exon:18041;Parent=MsG0580029194.01.T01
Chr5 exon 93459462 93459670 93459462 ID=MsG0580029194.01.T01:exon:18040;Parent=MsG0580029194.01.T01
Chr5 exon 93459226 93459369 93459226 ID=MsG0580029194.01.T01:exon:18039;Parent=MsG0580029194.01.T01
Chr5 exon 93458995 93459142 93458995 ID=MsG0580029194.01.T01:exon:18038;Parent=MsG0580029194.01.T01
Chr5 exon 93458419 93458583 93458419 ID=MsG0580029194.01.T01:exon:18037;Parent=MsG0580029194.01.T01
Chr5 exon 93457980 93458058 93457980 ID=MsG0580029194.01.T01:exon:18036;Parent=MsG0580029194.01.T01
Chr5 exon 93457724 93457854 93457724 ID=MsG0580029194.01.T01:exon:18035;Parent=MsG0580029194.01.T01
Chr5 CDS 93461876 93461956 93461876 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93461585 93461690 93461585 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93460974 93461110 93460974 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93460726 93460809 93460726 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93460547 93460641 93460547 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93460299 93460407 93460299 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93459867 93459959 93459867 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93459462 93459670 93459462 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93459226 93459369 93459226 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93458995 93459142 93458995 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93458419 93458583 93458419 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93457980 93458058 93457980 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Chr5 CDS 93457724 93457854 93457724 ID=MsG0580029194.01.T01:cds;Parent=MsG0580029194.01.T01
Gene Sequence

>MsG0580029194.01.T01

ATGAAGGTTCCAAAGAGTAATCAACTTGGTGTTCAGATCAAAGATGGGTTGTTCTACAAATTCACTGGATTTCGTGATCAGGACGTTGCAAGTTTGACCAGTTTTTTCCAAAACACCTTTGGAATAGCTGTAAAGGAGAAGCAACTTTCTGTTAGCGGGCGCAATTGGGGAGAAGTTGATTTAAATGGAAATATGCTGGCTTTCATGGTTGGCTCAAAGCAAGCTTTCGAAGTGCCTTTAGCGGACGTCTCACAAACTAACCTTCAAGGGAAAAATGATGTGATCTTGGAGTTCCATGTGGATGACACAACTGGAGCCAATGAGAAAGATTCGTTGATGGAGATAAGTTTCCATATACCGAATTCCAACACCCAGTTTGTTGGTGATGAAAATTGCCCACCTGCTCAGGTTTTCCGTAATAAAATAATGTCTGTGGCCGACGTTGGTGTTGGAGGTGAAGATGCTGTTGTTACATTTGATGGTATTGCAATCCTTACACCGAGGGGAAGATATAGTGTCGAGTTACACCTGTCATTCTTGCGGCTTCAAGGACAGGCTAATGATTTCAAAATCCAGTATAGCAGTGTAGTTCGACTATTTTTACTTCCTAAGTTCGAAACTGATTATGTGGTTGAAAGTGAATTGGCATTAAGTGAAGATCTGTATAACTCTAAGTACAAAGACAGATTGGAGTTGTCGTATAAGGGGCTTATCCATGAAGTGTTCACCACAGTATTACGTGGCTTGTCTGGGGCCAAAGTTACTAAGCCTGGAAAATTTAGGAGTTGTCAAGATGGTTATGCAGTGAAATCATCTCTGAAAGCTGAAGATGGAATTTTGTATCCCCTTGAGAAGAGCTTCTTCTTTCTACCTAAACCTCCCACTCTTATTACTCATGAAGAGGTGAAATTTGAATTGACTATGTGGAATTTGAGCGACATGCTGCTGGTGGGTCAAATATGCATTTTTGACCTACTTATCAGACTAAAATCTGACCAAGAGCACCTCTTTCGTAATATTCAGAGAAACGAGTACCACAATTTGTATGGTTTTATCAGTTCAAAGGGCTTGAAAATTATGCATTTAGGAGATGCCCAACCAACTACTGGTGTGGCTAAGGTTCTTGAGGGTGATGATGATGATGCTGTTGATCCACATCTTGAGCGCATCAGAAATGAAGCTGGTGAAGATGAAAGTGACGAGGAGGATGAAGACTTCGTTGCCGAAAAGGACGATGAAGGGTCTCCTACTGATGATTCTGGGGCAGATGATTCTGATGCTAGCCAAAGTGGTGATGAGAAAGAGGCAAGCGATTTGTTTTATGTTCCTTTATTATCGTGTGATGCCTCACCTCTACTCTTTACATCTTTGAATATAAAGAAAGCTAATCCTGGGATTTCATTTACGGATGTGGCAAAATTACTTGGAGAGAACTGGAAAAAAATGTCAGCTGAGGAGAAGGAGCCATACGAGGCAAAAGCTCGTGTTGATAAAAAACGTTACGAGGATGAGAAGATTGTCTACAATGCTCAACCACAACCGATGAATATTGATTCAGGAAATGAATCTGACAGTGCCTAA
Protein sequence

>MsG0580029194.01.T01

MKVPKSNQLGVQIKDGLFYKFTGFRDQDVASLTSFFQNTFGIAVKEKQLSVSGRNWGEVDLNGNMLAFMVGSKQAFEVPLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRNKIMSVADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKFETDYVVESELALSEDLYNSKYKDRLELSYKGLIHEVFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLITHEEVKFELTMWNLSDMLLVGQICIFDLLIRLKSDQEHLFRNIQRNEYHNLYGFISSKGLKIMHLGDAQPTTGVAKVLEGDDDDAVDPHLERIRNEAGEDESDEEDEDFVAEKDDEGSPTDDSGADDSDASQSGDEKEASDLFYVPLLSCDASPLLFTSLNIKKANPGISFTDVAKLLGENWKKMSAEEKEPYEAKARVDKKRYEDEKIVYNAQPQPMNIDSGNESDSA*